Lag0010314 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0010314
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr9: 46295967 .. 46298995 (-)
RNA-Seq Expression	Lag0010314
Synteny	Lag0010314

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAACTGAACCCCTACTAAACCGGTAATTAGCTAGCTTTCTCCTTTTGATTGGTTAATGCATTGAGATTTCAAATTCTTTATCAATTTTATGCTATTATTTTATTTATTGTTTTGACATTTAACATTTGACATTTGATGCAGTACTCATAAACACGACGATTTTAGGTCTAACGTTGCTCTCGATATCCTTTTCATTATCTTATGCATTCTGCTAATTGGGGGTGCAATATACATTTTGATTCTACGATGGGATGGTGTATATAGAACAGTTATCAGTTTTGAGGTACATAATTTTAATATAATCTAATTTGTTAGTCTTTTTAGGTGTCCATTAAATTTTAAATAAATATATATATATATATGAGCCTCACTTTTAAGGTATTTTTCAATCTATACAGCTTGTTTGCAAAGGTAGGAATGCCCATGAACTACAACTTGGTCTGGACAATATTCATGCATCATCTTCCCAGATATCATCAGGTTTCTTTAATTTCTTTCTATTTAATCATCCTAAATCATTCATTCTATATTTATATATTTAAAACACATAATAATATTTCTAATTTTATACTTTTCCTATCCAGATACAGCCGACTATTTACTCATTTTCCCCATACAATATTTCTCTGCCTCTTCATCTGTGAGTTTAATGTTTATTTTATTTTATTTTATTTTATTTTTATTTTATGTGACTCCCATCAAATATTTTTATCTTTCTATTTATTATTTACATTTATTTCCAGATTAAGAAAGGTTATAAACCATCCAAAGTGTGGAATGCATACTATGAGTCTCTAGCTTTGGAAGCAACCAAAGAATTTTCCCAAATGAATTTGGAGACTACTGCAAACAATAATAATAATACACTCCAAAATCATGAGACATACATTGTGGTAAAGTATCAACATTTTTATGGTAATTTTTTTTAATCATGCCTCGGAAGTTAATTAATTTATATTAATTTATATTAATGGAATTACAATCAGGTTAAATTACTAGTTGCTACTACAGTTGATGTTGACATTCCATATGTCAAAACTTTGGAAGATATCATTACAACATTGCGCACCATCAAGTCAGTATGTCATAATATAGAGCACATTTCCGTTTTTGGAGATAGTCATTTCTATGAACATGATCATATTAAGGTTAGTAGAATAATTTAATTTGTTAGTAATTATAATTTTTAGGTTAGCAGAAGAATTAAAATTTTCAGTTATTATAATTCTATTCTAATTATAATAACTGAACATTTATTGCTTATTGATTTTTTTTTTCTTTTATGTATTTGTAGGCTGAAGATTTATTTTGGACGCATCCACTAAATTCAACTGTTGATATTCCATCATTGAATTTAATTGTTCAACCTTAACTTAGATGGAAAAATAGTCGGGGTTTTGCCCAGAAAAAAAAATTATTTTACGTGGGGAATGAATATTCTGAATATTCTCTATACTAGCGACTTTCCACGTGCATAGCACGTGTTATGTTTTGTTTATTATATTATTTAACTTTAGATTTTTTTTAGAATAATTATTTAACTTTAGATTGATTTACTTCATTTGAGAATTTGCATACTTCATACATGTTAACTCAAAGACAAAAGACATATTTTTGCTTAATGTTGTTTTACCTCTCTCGCGTAATAATAATAAATAAATAAAAAAAGAAAGGAAAAGAATACTTCATACATAATTTGGGAATTTGCTAACTTGAAAGTACATGAACTAATGTAAAAATTGTAGTTGCTCCAAATTTTTACTCACATTCTCACATCCAAGTAAATACAATGAAATCATTATTTTAATTTTTATAAATTTAATGCATTTAATTCGAAACCTCACATTAATTATGAATTACTCATGTATATGAGAACTGATTTAAGGTTGTGATTATATATTTTTAATTTGGGAGAAACTGAAATGATCAAAATGTTTTATTTTAGAAACATAAAATTTTGTAACCGTTTCATTTTTAATCATCACATCACATCTCCGTGTTCCTCGTTTTAAATTTATCAAATTAATGCATTTAGATCCTTAAATTAAATATGAATTACCTATCTTTTTTCTTTTACCAAATAATTAATTTTTTTAACGTCATTTTAGATTTAATAAACTTGTGTAGTTAATTAAAAATTTACATTTAATACCATTTTTTTTTTGAAAAATTAATAACATTTTCTTTTGGGTATTAGTGTAATCATCATAGTTGACATTATCGTAATAAAATTAAAATATAAAGAACATTAGTCTAAAAATTGTTAATTCAATTAATTATAATTAAAGTTAGTAATTATAAAATTTAATATTTTAATCTTTTAAATGTCATTTTATGGGTTAAATTAAATATATAGATTTTATAATTATTAGTAGTATATTTTGTAAATTTAAGATTTAGCGATGCCCATTTGTTAGCTAATTTAGCGATGTCGTCACATATGAAACTAGAAATAGATTTTTTTTAGAAGAGAAACAAATTTCATTCATAAATGAAATAAAGGGAGAAAGGGCTCCCAAGTAGATCATTGCAAGAAGGAGGTCCAATTGAAAATTAAAGAAGAAAGGCTATAGTCTCTAAAAGGGTGTTTACATTTACACCAATAAAAAGCATTAAACTAGAAAGAGATAGAAACGCTAAAATATTAAACTAGAAAAAGATAAAGCCAGAGACACTAAATGACTGCAACACCACCACCACTCTAGACTTTTGAAGCAAGGTGTCGCTGAAATATTAAAATATATGTTATAGGTAATTTTGGACCATATGCAAGGAACTGACGAGGACAGCGCGATACCAGCCCAAGGAGACAGTCAGGAAACGGGATCCGGAGAAGAACATGCCAGAGGATCAGGCGAAAGCCGAAGGGATCGAGCTTTCGGCCCGACCCACTGCTCGGCCTCGGCCATGGGTCGAGGTCGACCACTCAGCCCACTTGCACGGGCCGAGTTTTTTCGGCCTCCGTTCAGTCCCTGGTGCCCCCGGCTGCCTCAGTTCCACTAGGTTCAGCCCAAATCGCCTCTGA

mRNA sequence

ATGAAAACTGAACCCCTACTAAACCGTACTCATAAACACGACGATTTTAGGTCTAACGTTGCTCTCGATATCCTTTTCATTATCTTATGCATTCTGCTAATTGGGGGTGCAATATACATTTTGATTCTACGATGGGATGGTGTATATAGAACAGTTATCAGTTTTGAGCTTGTTTGCAAAGGTAGGAATGCCCATGAACTACAACTTGGTCTGGACAATATTCATGCATCATCTTCCCAGATATCATCAGATACAGCCGACTATTTACTCATTTTCCCCATACAATATTTCTCTGCCTCTTCATCTATTAAGAAAGGTTATAAACCATCCAAAGTGTGGAATGCATACTATGAGTCTCTAGCTTTGGAAGCAACCAAAGAATTTTCCCAAATGAATTTGGAGACTACTGCAAACAATAATAATAATACACTCCAAAATCATGAGACATACATTGTGGTTAAATTACTAGTTGCTACTACAGTTGATGTTGACATTCCATATGTCAAAACTTTGGAAGATATCATTACAACATTGCGCACCATCAAGTCAGTATGTCATAATATAGAGCACATTTCCGTTTTTGGAGATAGTCATTTCTATGAACATGATCATATTAAGGAACTGACGAGGACAGCGCGATACCAGCCCAAGGAGACAGTCAGGAAACGGGATCCGGAGAAGAACATGCCAGAGGATCAGGCGAAAGCCGAAGGGATCGAGCTTTCGGCCCGACCCACTGCTCGGCCTCGGCCATGGGTCGAGGTCGACCACTCAGCCCACTTGCACGGGCCGAGTTTTTTCGGCCTCCGTTCAGTCCCTGGTGCCCCCGGCTGCCTCAGTTCCACTAGGTTCAGCCCAAATCGCCTCTGA

Coding sequence (CDS)

ATGAAAACTGAACCCCTACTAAACCGTACTCATAAACACGACGATTTTAGGTCTAACGTTGCTCTCGATATCCTTTTCATTATCTTATGCATTCTGCTAATTGGGGGTGCAATATACATTTTGATTCTACGATGGGATGGTGTATATAGAACAGTTATCAGTTTTGAGCTTGTTTGCAAAGGTAGGAATGCCCATGAACTACAACTTGGTCTGGACAATATTCATGCATCATCTTCCCAGATATCATCAGATACAGCCGACTATTTACTCATTTTCCCCATACAATATTTCTCTGCCTCTTCATCTATTAAGAAAGGTTATAAACCATCCAAAGTGTGGAATGCATACTATGAGTCTCTAGCTTTGGAAGCAACCAAAGAATTTTCCCAAATGAATTTGGAGACTACTGCAAACAATAATAATAATACACTCCAAAATCATGAGACATACATTGTGGTTAAATTACTAGTTGCTACTACAGTTGATGTTGACATTCCATATGTCAAAACTTTGGAAGATATCATTACAACATTGCGCACCATCAAGTCAGTATGTCATAATATAGAGCACATTTCCGTTTTTGGAGATAGTCATTTCTATGAACATGATCATATTAAGGAACTGACGAGGACAGCGCGATACCAGCCCAAGGAGACAGTCAGGAAACGGGATCCGGAGAAGAACATGCCAGAGGATCAGGCGAAAGCCGAAGGGATCGAGCTTTCGGCCCGACCCACTGCTCGGCCTCGGCCATGGGTCGAGGTCGACCACTCAGCCCACTTGCACGGGCCGAGTTTTTTCGGCCTCCGTTCAGTCCCTGGTGCCCCCGGCTGCCTCAGTTCCACTAGGTTCAGCCCAAATCGCCTCTGA

Protein sequence

MKTEPLLNRTHKHDDFRSNVALDILFIILCILLIGGAIYILILRWDGVYRTVISFELVCKGRNAHELQLGLDNIHASSSQISSDTADYLLIFPIQYFSASSSIKKGYKPSKVWNAYYESLALEATKEFSQMNLETTANNNNNTLQNHETYIVVKLLVATTVDVDIPYVKTLEDIITTLRTIKSVCHNIEHISVFGDSHFYEHDHIKELTRTARYQPKETVRKRDPEKNMPEDQAKAEGIELSARPTARPRPWVEVDHSAHLHGPSFFGLRSVPGAPGCLSSTRFSPNRL

Homology

The following BLAST results are available for this feature:

BLAST of Lag0010314 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0010314 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0010314 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0010314 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010903	Protein of unknown function DUF1517	PFAM	PF07466	DUF1517	coord: 81..187 e-value: 4.8E-8 score: 33.4

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0010314.1	Lag0010314.1	mRNA