Lag0010285 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0010285
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	ubiquitin-conjugating enzyme E2 20
Location	chr9: 46101069 .. 46102437 (+)
RNA-Seq Expression	Lag0010285
Synteny	Lag0010285

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGCCATTAATCGATACACCGACAACACGGCGCCGGCGAACCCTGTTGTTTCTCCAGCCAAGCAGTCCTTGCCACCGGCCAAAACCGCGGATTCTCAGTCCGTTCTCAAAAGGTATACACATGTCCGTCTCTTTCGTATTTGATTCGATTCGTACATCACTGCGGCTCGATCGCGTTACTGTGCGTGTGCAATCGTCTCTGTTTTTTGTGGTTTTGGGCCGTTATTGAACTTTAAGCTGGATGAGGTTGTTGTAGGGTTCTGGATTTAGTTTGAACTGATTTTGAGATGGATTGTTTTATGGTCTTTCTTAATGATCTTTTTAGGGTTTTAGCGGTAATTTAAGCGTCTTTAGGCCCTCTCTCTTTCCTCTTGCACCATGGCCATATGAGGTCTATGTTGAAAGATAAACCTCGTTCTTGTGTGTGTGTTTCAAAGAAATTAGCGAAGAACAGATCTTACTGAGGACTCCGTCTGTTTCCAACAAAACTAACGACCTTTCTTCAAATGTTGTTATGTTTTTCTGATAACAGGTTGCAGTCTGAATTAATGGCTCTAATGGTAAGACTTGCTACATTTTTTTCATATTATATTACTTTGGACTGTCAAATTCTGAAGCATTTGGATATGAGATTCTGAAGTTGGCCAAAAGACTCTTCTAAACTCATGTTTACGAAATTGCAGATGAGTGGAGACTCTGGGATCTCAGCCTTTCCTGAGGAAGATAACATATTCTGCTGGAAAGGGACAATAACCGGAAGCAAAGACACAGTGTTTGAAGGAACAGAATACAGGCTATCCTTTTCATTCCCTAACGATTACCCTTTTAAGCCTCCAAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCAAATGTGGACGTTTATGGCAATATTTGCTTGGACATACTTCAGGTAATTCAGCTATGGCGAAATCTTCAACATTGAAATGATAACTTCTCTGATTTGTCAGGACGAAAACAACCAGAAGTGAGAAATGTTTCCTCTTTTGCAGGATAAATGGTCATCAGCATATGATGTGAGAACAATACTTCTATCCATCCAGAGTCTGCTTGGAGGTAACCCCCCAAAAAACACCATACTTTTTTATGGTTAGAATGGAATATAGAATTCTCAATGAGCTTTTGGCATTTATTTGCAGAACCAAACATAAGTTCACCTCTAAACACACAGGCAGCCCAACTGTGGAGTAATCAAGAAGGTGGGTTTCTACTGTAACACACTATTTTCTTTTCTCTTTGAGTTGCATTGTGATGAAAGTTGGCTCACTCATGTTTTGTTTCTGTGTTTGCTGTGTAGAATATCGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCTTAG

mRNA sequence

ATGGCGGCCATTAATCGATACACCGACAACACGGCGCCGGCGAACCCTGTTGTTTCTCCAGCCAAGCAGTCCTTGCCACCGGCCAAAACCGCGGATTCTCAGTCCGTTCTCAAAAGGTTGCAGTCTGAATTAATGGCTCTAATGATGAGTGGAGACTCTGGGATCTCAGCCTTTCCTGAGGAAGATAACATATTCTGCTGGAAAGGGACAATAACCGGAAGCAAAGACACAGTGTTTGAAGGAACAGAATACAGGCTATCCTTTTCATTCCCTAACGATTACCCTTTTAAGCCTCCAAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCAAATGTGGACGTTTATGGCAATATTTGCTTGGACATACTTCAGGATAAATGGTCATCAGCATATGATGTGAGAACAATACTTCTATCCATCCAGAGTCTGCTTGGAGAACCAAACATAAGTTCACCTCTAAACACACAGGCAGCCCAACTGTGGAGTAATCAAGAAGAATATCGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCTTAG

Coding sequence (CDS)

ATGGCGGCCATTAATCGATACACCGACAACACGGCGCCGGCGAACCCTGTTGTTTCTCCAGCCAAGCAGTCCTTGCCACCGGCCAAAACCGCGGATTCTCAGTCCGTTCTCAAAAGGTTGCAGTCTGAATTAATGGCTCTAATGATGAGTGGAGACTCTGGGATCTCAGCCTTTCCTGAGGAAGATAACATATTCTGCTGGAAAGGGACAATAACCGGAAGCAAAGACACAGTGTTTGAAGGAACAGAATACAGGCTATCCTTTTCATTCCCTAACGATTACCCTTTTAAGCCTCCAAAGGTGAAGTTCGAGACTGGCTGCTTTCACCCAAATGTGGACGTTTATGGCAATATTTGCTTGGACATACTTCAGGATAAATGGTCATCAGCATATGATGTGAGAACAATACTTCTATCCATCCAGAGTCTGCTTGGAGAACCAAACATAAGTTCACCTCTAAACACACAGGCAGCCCAACTGTGGAGTAATCAAGAAGAATATCGGAAAATGGTGGAGAAATTGTACAAGCCTCCAACAGCAGCTTAG

Protein sequence

MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTAA

Homology

[Close]

BLAST of Lag0010285 vs. NCBI nr
Match: XP_004140207.1 (ubiquitin-conjugating enzyme E2 20 [Cucumis sativus] >XP_008449688.1 PREDICTED: ubiquitin-conjugating enzyme E2 20 [Cucumis melo] >KAA0061782.1 ubiquitin-conjugating enzyme E2 20-like isoform X3 [Cucumis melo var. makuwa] >KGN48113.1 hypothetical protein Csa_003824 [Cucumis sativus] >TYJ96123.1 ubiquitin-conjugating enzyme E2 20-like isoform X3 [Cucumis melo var. makuwa])

HSP 1 Score: 368.6 bits (945), Expect = 3.0e-98
Identity = 180/181 (99.45%), Postives = 181/181 (100.00%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Lag0010285 vs. NCBI nr
Match: XP_038900928.1 (LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 20 [Benincasa hispida])

HSP 1 Score: 367.1 bits (941), Expect = 8.8e-98
Identity = 179/181 (98.90%), Postives = 180/181 (99.45%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT PANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSK+TVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKETVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Lag0010285 vs. NCBI nr
Match: XP_022957735.1 (ubiquitin-conjugating enzyme E2 20-like [Cucurbita moschata] >KAG6605929.1 Ubiquitin-conjugating enzyme E2 19, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035878.1 Ubiquitin-conjugating enzyme E2 19, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 365.5 bits (937), Expect = 2.6e-97
Identity = 178/181 (98.34%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT PANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Lag0010285 vs. NCBI nr
Match: XP_023533942.1 (ubiquitin-conjugating enzyme E2 20-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 365.2 bits (936), Expect = 3.4e-97
Identity = 177/181 (97.79%), Postives = 179/181 (98.90%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT PANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTTPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Lag0010285 vs. NCBI nr
Match: XP_022995155.1 (ubiquitin-conjugating enzyme E2 20-like [Cucurbita maxima])

HSP 1 Score: 362.1 bits (928), Expect = 2.8e-96
Identity = 175/181 (96.69%), Postives = 178/181 (98.34%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAAINRYTDNT P+NPVVSPAKQSLPPAK ADSQSVLKRLQSELMALMMSGDSGISAFPE
Sbjct: 1   MAAINRYTDNTTPSNPVVSPAKQSLPPAKAADSQSVLKRLQSELMALMMSGDSGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVD+YGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDIYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPN SSPLNTQAAQLWSNQE+YRKMVEKLYKPPTA
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNTSSPLNTQAAQLWSNQEDYRKMVEKLYKPPTA 180

Query: 181 A 182
           A
Sbjct: 181 A 181

[Close]

BLAST of Lag0010285 vs. ExPASy Swiss-Prot
Match: Q8L7T3 (Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 4.4e-84
Identity = 154/180 (85.56%), Postives = 158/180 (87.78%), Query Frame = 0


Query: 1   MAAINRYTDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPE 60
           MAA+N Y  NT    P  + +KQ   P KT DSQSVLKRLQSELM LMM G  GISAFPE
Sbjct: 1   MAAVNGYQGNTPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPE 60

Query: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICL 120
           EDNIFCWKGTITGSKDTVFEGTEYRLS SF NDYPFKPPKVKFET CFHPNVDVYGNICL
Sbjct: 61  EDNIFCWKGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICL 120

Query: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 180
           DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPP+A
Sbjct: 121 DILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPSA 180

[Close]

BLAST of Lag0010285 vs. ExPASy Swiss-Prot
Match: Q9LJZ5 (Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 9.2e-82
Identity = 151/181 (83.43%), Postives = 156/181 (86.19%), Query Frame = 0


Query: 1   MAAINRYTDNT-APANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFP 60
           MA +N YT NT A   P  + +KQS PP KT DS SVLKRLQSELM LMM  D GISAFP
Sbjct: 1   MATVNGYTGNTPAATTPAATGSKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFP 60

Query: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNIC 120
           EEDNIFCWKGTITGSKDTVFEGTEYRLS +F NDYPFK PKVKFET CFHPNVD+YGNIC
Sbjct: 61  EEDNIFCWKGTITGSKDTVFEGTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNIC 120

Query: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLYKPPT 180
           LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLN QAAQLWSNQEEYRKMVEKLYKP  
Sbjct: 121 LDILQDKWSSAYDVRTILLSIQSLLGEPNISSPLNNQAAQLWSNQEEYRKMVEKLYKPLN 180

[Close]

BLAST of Lag0010285 vs. ExPASy Swiss-Prot
Match: Q54XS6 (Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum OX=44689 GN=ube2c PE=3 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 2.4e-53
Identity = 98/150 (65.33%), Postives = 119/150 (79.33%), Query Frame = 0


Query: 31  ADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCWKGTITGSKDTVFEGTEYRLSFSF 90
           +   SV KRLQSELM LMM    GISAFP+ DNIF W GTI G+KDTV+E  E+++S  F
Sbjct: 2   SQDHSVSKRLQSELMNLMMGPSPGISAFPDGDNIFNWIGTIQGAKDTVYEQMEFKMSLKF 61

Query: 91  PNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKWSSAYDVRTILLSIQSLLGEPNIS 150
           P DYP+KPP VKFET CFHPNVD  GNICLDIL+DKWS  Y+VR++L+SIQSLLGEPN  
Sbjct: 62  PTDYPYKPPTVKFETQCFHPNVDNNGNICLDILKDKWSPVYNVRSLLISIQSLLGEPNNE 121

Query: 151 SPLNTQAAQLWSNQEEYRKMVEKLYKPPTA 181
           SPLN+ AA LWSNQ+EY+K+++K Y+  T+
Sbjct: 122 SPLNSYAASLWSNQDEYKKVLDKRYQEATS 151

[Close]

BLAST of Lag0010285 vs. ExPASy Swiss-Prot
Match: Q4R9D1 (Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis OX=9541 GN=UBE2C PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 1.3e-51
Identity = 100/168 (59.52%), Postives = 120/168 (71.43%), Query Frame = 0


Query: 8   TDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCW 67
           + N  PA   V+ A++   P+  A    V KRLQ ELM LMMSGD GISAFPE DN+F W
Sbjct: 3   SQNRDPAATSVTAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKW 62

Query: 68  KGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKW 127
            GTI G+  TV+E   Y+LS  FP+ YP+  P VKF T C+HPNVD  GNICLDIL+DKW
Sbjct: 63  VGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKW 122

Query: 128 SSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 176
           S+ YDVRTILLSIQSLLGEPNI SPLNT AA+LW N   ++K +++ Y
Sbjct: 123 SALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170

[Close]

BLAST of Lag0010285 vs. ExPASy Swiss-Prot
Match: Q32PA5 (Ubiquitin-conjugating enzyme E2 C OS=Bos taurus OX=9913 GN=UBE2C PE=2 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 3.8e-51
Identity = 99/168 (58.93%), Postives = 119/168 (70.83%), Query Frame = 0


Query: 8   TDNTAPANPVVSPAKQSLPPAKTADSQSVLKRLQSELMALMMSGDSGISAFPEEDNIFCW 67
           + N  P    V+ A++   P+  A    V KRLQ ELM LMMSGD GISAFPE DN+F W
Sbjct: 3   SQNRDPVAASVAAARKGAEPSGGAARGPVGKRLQQELMTLMMSGDKGISAFPESDNLFKW 62

Query: 68  KGTITGSKDTVFEGTEYRLSFSFPNDYPFKPPKVKFETGCFHPNVDVYGNICLDILQDKW 127
            GTI G+  TV+E   Y+LS  FP+ YP+  P VKF T C+HPNVD  GNICLDIL+DKW
Sbjct: 63  VGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDTQGNICLDILKDKW 122

Query: 128 SSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLWSNQEEYRKMVEKLY 176
           S+ YDVRTILLSIQSLLGEPNI SPLNT AA+LW N   ++K +++ Y
Sbjct: 123 SALYDVRTILLSIQSLLGEPNIDSPLNTHAAELWKNPTAFKKYLQETY 170

The following BLAST results are available for this feature:

BLAST of Lag0010285 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140207.1	3.0e-98	99.45	ubiquitin-conjugating enzyme E2 20 [Cucumis sativus] >XP_008449688.1 PREDICTED: ...	[more]
XP_038900928.1	8.8e-98	98.90	LOW QUALITY PROTEIN: ubiquitin-conjugating enzyme E2 20 [Benincasa hispida]	[more]
XP_022957735.1	2.6e-97	98.34	ubiquitin-conjugating enzyme E2 20-like [Cucurbita moschata] >KAG6605929.1 Ubiqu...	[more]
XP_023533942.1	3.4e-97	97.79	ubiquitin-conjugating enzyme E2 20-like [Cucurbita pepo subsp. pepo]	[more]
XP_022995155.1	2.8e-96	96.69	ubiquitin-conjugating enzyme E2 20-like [Cucurbita maxima]	[more]

BLAST of Lag0010285 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8L7T3	4.4e-84	85.56	Ubiquitin-conjugating enzyme E2 20 OS=Arabidopsis thaliana OX=3702 GN=UBC20 PE=2...	[more]
Q9LJZ5	9.2e-82	83.43	Ubiquitin-conjugating enzyme E2 19 OS=Arabidopsis thaliana OX=3702 GN=UBC19 PE=1...	[more]
Q54XS6	2.4e-53	65.33	Probable ubiquitin-conjugating enzyme E2 C OS=Dictyostelium discoideum OX=44689 ...	[more]
Q4R9D1	1.3e-51	59.52	Ubiquitin-conjugating enzyme E2 C OS=Macaca fascicularis OX=9541 GN=UBE2C PE=2 S...	[more]
Q32PA5	3.8e-51	58.93	Ubiquitin-conjugating enzyme E2 C OS=Bos taurus OX=9913 GN=UBE2C PE=2 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 38..180 e-value: 4.4E-60 score: 215.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..32
None	No IPR available	PANTHER	PTHR24068:SF373	BNAC06G03670D PROTEIN	coord: 18..178
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 18..178
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 39..173 e-value: 3.0E-47 score: 159.8
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 35..180 score: 48.557674
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 38..175 e-value: 1.17818E-64 score: 193.188
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 28..177 e-value: 1.4E-57 score: 195.7
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 28..174
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 108..123

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0010285.1	Lag0010285.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031145	anaphase-promoting complex-dependent catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0030071	regulation of mitotic metaphase/anaphase transition
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0061631	ubiquitin conjugating enzyme activity