Lag0010252 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0010252
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr9: 45816789 .. 45819442 (+)
RNA-Seq Expression	Lag0010252
Synteny	Lag0010252

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGACGAGTTCGAATTTCGTCGACTTCTTCAACTATTTCCCGTTGTTCGATCTCCAGATTATCATGTAACATTTTTCTCTTTCTGCTATATCTATCTTTTTTCAGAAAATTAATTAGCGTAGAAATTTTCATGATTATTCAATGTTGTGTATTCCATTGCTAGCCTGTTATTTGTTAACGACTGAAATTATATGAGTTTTCTGTCTCGCTTTCAATTCTTTTAGACCTTTTTCCAGCTAGATTGTTGTGATTCGTTGGTGGAAGGTCACTGGCCACCCGGCGATTAGGACGGCCGGATTGGGGCGTTCTTGTTAGTTGTTAGATCGACATAGTTTGAATAAATCGCTTTTTCTTGAATTAGGTCTGTCGTGGTGTTCTTTTTTATTTAATGCAAGATATTGGCCAAAAGTGGTGAAAATATTCGGTAACTAGTTGATATATTGAAGAGAGCTTAGTTTTTGGGTTCAAGATAAAAGTGATATTATTCTGAAATAATTGTTTATCAGTTTCGAAGATAAAATCTGCATGAATTGATTACTGGTAATTGAAATAAAAGAGATTCTACTAGGGATACAAACTGGTTTGGCTTATTGAGCTGATGAAATACGGACATAATTTATTGGATATCATGATTGCAGCCTTTAGCACGGGAAATGATGTTTGAATAGGAGCTTTGTTTCATTTGATTAATAGCTGTATAACTCTGATTTCTTGTAAGACTGGCGTAATTTGTGTATTAATTATAGTGAAAATCAAAATCCTTTGCAGTCTTTACCTGAATTTTGCTGAGTATAAGAAACATAAAGTACCATAGCTAAAAACCTCGATGGTTTTGCTCTTTATTGAAGGTTTAGCTTCTTTTCCCTCTTTGAGAAGCATATATGCACACCGATAGATGTTGCAATATCGACCATATGAAGGACTCTGATAAACTTGTCCGTAATGCACATTTTGTTTCTGATGGAAGGGTCAATTTTTAGATGGAAAACAGAAAGCTAAAAGTTGTTTTGGTCCCACCCCTTGTGTACCCTGAACATGAAGGGAATTTAAAATGCAAAAGTTGTTTCTTAGTATATGTGTGTCTAAAAGGTTTCAAACCTTGGTGGTTGTAAAAAATATTCAATTTATCCTATCAGAAGAAATGCAAACTCCAAATTACTATAATTTTGCACTTATAATTGGGAGGAAGATCCATTGGCCTTGGTTTATAGAAGACTGGCTGTGGCTGTGTTCGACAGTAAGTGCCTCTTCATTTTATGTCTCTCATTTTGATGTTTTACCAATAATTGAAGAAGAAATTAACTGAGACAAGGGAAACTTTTTAATTCAACTTTAACCACTTGCGCTGAGACTAATATGAATTTCAAAGTTTCTTGAATGATATGTATAAAATGCCATGAACTGAACTGTTAAGTTTTTTCTGTTCCCATAAAGAGTGTGTTACAATTATTAGTAGCATAGGCATCCCTCGAGTGTCTTAAATATCTCATACAATTTTCAGGCAGAGTCAGAGTTATCTAGGCAGTCAACATCCAAGGCATCCAAGAGTGAGGTTAATTAAATACTTTGCCCTTACCTCCTGTCCTTTTTGCATATCCTTATTGCTGGATAATTAAATACTGAATGTTGTCAAATTTTCATAGTTAAGCGAATGGCAAGAGACATGGAATGAAGGAGGAGAAAAATCAAAGGATCAAGTAACTGAACCACATGGTATTTGATCTTGAAAATATAATTCTTTTTTGTTTCATTCCAGATTATTTTTTAAAAAGGTTTTAGAATATGTTTGGATTTGCTTTAAGGAACCATATGTTGAAATTCCTTTGTACCTAGGATATAATTTTGCCTCGATGCAATCTTTTCTAGGATAGCATATATCTGCTCTTAAAAATTGCTTATGAAATTTTCCTTTCTGGTTTGAGTAGATTGCATCCGTTCAATGGTCCAGATATGGAAAGCTTCCTGTTTTTCCTAGTATTTTAATTTGAAGTTAGGCTAATATTACATTTTTTTGGATAATTGCTAACAGATGAATTCTGGGAGAAGCTGAAGTTAGCTGCTGAGAAGAAGGTATGAGCTTCTATTTCTTTTTGAAGTATGATGATCATTTGGAAACTATATGCTGGGACTGCAAGAAAGGATTTTAGTCTAAATTAGGGTATAAACCTCCTAGAGTTACTCGGTTATCCTTTTCTGTTACAAATCCTCGTGATTAAGTTTATAACTCATTAGTTACAATCTATATGATAAAAATGGAAGTTCAACAATTTTTTTCATCTACATAAATTCTTGTTGTGCCTTTTGAATATTCTAATTTGTCAACACATTCATCCTAATGATACATTGGATTATTATTTATTTTGAATGCGAAAAGAACAATGCTTTTATTTTGCATCTAACAACTTGTTTGCTTTTTCATTCCACGCAGGTGGGCAAGGTTGAAGCAGAAAGATTCTGTAGCTCATTTCAACAGATACACAATAAACTTGTATGTCATTCAGAAGATGTCATGAAATTAGATTTTTATTTTTCTTTCTCCAATTACATTAGAACAAAAACCATATAATCAATTTGATTACAGGTTAATGAAGAACTGAGTTTAGATGCTGCCCAAACCTTTCTGGAATCCTTCAGTTCCAGTTCCACAGAATAG

mRNA sequence

ATGGACGAGTTCGAATTTCGTCGACTTCTTCAACTATTTCCCGTTGTTCGATCTCCAGATTATCATGCAGAGTCAGAGTTATCTAGGCAGTCAACATCCAAGGCATCCAAGAGTGAGTTAAGCGAATGGCAAGAGACATGGAATGAAGGAGGAGAAAAATCAAAGGATCAAGTAACTGAACCACATGATGAATTCTGGGAGAAGCTGAAGTTAGCTGCTGAGAAGAAGGTGGGCAAGGTTGAAGCAGAAAGATTCTGTAGCTCATTTCAACAGATACACAATAAACTTGTTAATGAAGAACTGAGTTTAGATGCTGCCCAAACCTTTCTGGAATCCTTCAGTTCCAGTTCCACAGAATAG

Coding sequence (CDS)

ATGGACGAGTTCGAATTTCGTCGACTTCTTCAACTATTTCCCGTTGTTCGATCTCCAGATTATCATGCAGAGTCAGAGTTATCTAGGCAGTCAACATCCAAGGCATCCAAGAGTGAGTTAAGCGAATGGCAAGAGACATGGAATGAAGGAGGAGAAAAATCAAAGGATCAAGTAACTGAACCACATGATGAATTCTGGGAGAAGCTGAAGTTAGCTGCTGAGAAGAAGGTGGGCAAGGTTGAAGCAGAAAGATTCTGTAGCTCATTTCAACAGATACACAATAAACTTGTTAATGAAGAACTGAGTTTAGATGCTGCCCAAACCTTTCTGGAATCCTTCAGTTCCAGTTCCACAGAATAG

Protein sequence

MDEFEFRRLLQLFPVVRSPDYHAESELSRQSTSKASKSELSEWQETWNEGGEKSKDQVTEPHDEFWEKLKLAAEKKVGKVEAERFCSSFQQIHNKLVNEELSLDAAQTFLESFSSSSTE

Homology

[Close]

BLAST of Lag0010252 vs. NCBI nr
Match: XP_023512799.1 (uncharacterized protein LOC111777433 isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 192.6 bits (488), Expect = 2.0e-45
Identity = 101/119 (84.87%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   MDEFEFRRLLQLFPVVRSPDYHAESELSRQSTSKASKSELSEWQETWNEGGEKSKDQVTE 60
           MDE EFRRLLQLFPVVRS DYHAESELSRQSTSK+SKSELSEWQE WNE GEKSKDQ ++
Sbjct: 1   MDESEFRRLLQLFPVVRSRDYHAESELSRQSTSKSSKSELSEWQEAWNEDGEKSKDQGSD 60

Query: 61  PHDEFWEKLKLAAEKKVGKVEAERFCSSFQQIHNKLVNEELSLDAAQTFLESFSSSSTE 120
            HD FW KLKLAAE+KVGK+EAERFC+SFQQIHNKLVNEELS DAA++FLESFS SSTE
Sbjct: 61  LHDAFWRKLKLAAEQKVGKLEAERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE 119

[Close]

BLAST of Lag0010252 vs. NCBI nr
Match: XP_022944774.1 (uncharacterized protein LOC111449126 isoform X1 [Cucurbita moschata] >KAG7010307.1 hypothetical protein SDJN02_27100 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.4 bits (485), Expect = 4.4e-45
Identity = 100/119 (84.03%), Postives = 109/119 (91.60%), Query Frame = 0


Query: 1   MDEFEFRRLLQLFPVVRSPDYHAESELSRQSTSKASKSELSEWQETWNEGGEKSKDQVTE 60
           MDE EFRRLLQLFPVVRS DYHAESELSRQSTSK+SKSELSEWQE WNE GEKSKDQ ++
Sbjct: 1   MDESEFRRLLQLFPVVRSRDYHAESELSRQSTSKSSKSELSEWQEAWNEDGEKSKDQGSD 60

Query: 61  PHDEFWEKLKLAAEKKVGKVEAERFCSSFQQIHNKLVNEELSLDAAQTFLESFSSSSTE 120
            HD FW+KLK AAE+KVGK+EAERFC+SFQQIHNKLVNEELS DAA++FLESFS SSTE
Sbjct: 61  LHDAFWKKLKFAAEQKVGKLEAERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE 119

[Close]

BLAST of Lag0010252 vs. NCBI nr
Match: XP_022995173.1 (uncharacterized protein LOC111490791 [Cucurbita maxima])

HSP 1 Score: 190.7 bits (483), Expect = 7.5e-45
Identity = 98/115 (85.22%), Postives = 106/115 (92.17%), Query Frame = 0


Query: 1   MDEFEFRRLLQLFPVVRSPDYHAESELSRQSTSKASKSELSEWQETWNEGGEKSKDQVTE 60
           MDEFEFRRLLQLFPVVRSPDYHAES+L+RQST K SKSE+SEWQE WNE GEKSKDQ  +
Sbjct: 1   MDEFEFRRLLQLFPVVRSPDYHAESDLTRQSTFKQSKSEVSEWQEAWNEDGEKSKDQPPD 60

Query: 61  PHDEFWEKLKLAAEKKVGKVEAERFCSSFQQIHNKLVNEELSLDAAQTFLESFSS 116
            H EFW KLKLAAE+KVGKVEAERFC+SFQQIHNKLVNEELSLDAA++FLESFSS
Sbjct: 61  LHGEFWMKLKLAAEQKVGKVEAERFCNSFQQIHNKLVNEELSLDAARSFLESFSS 115

[Close]

BLAST of Lag0010252 vs. NCBI nr
Match: XP_023532384.1 (uncharacterized protein LOC111794573 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 187.6 bits (475), Expect = 6.3e-44
Identity = 96/115 (83.48%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MDEFEFRRLLQLFPVVRSPDYHAESELSRQSTSKASKSELSEWQETWNEGGEKSKDQVTE 60
           MDEFEFRRLLQLFPVVRSPD+HAES+L+RQST K SKSE+SEWQE WNE GEKSKDQ  +
Sbjct: 1   MDEFEFRRLLQLFPVVRSPDFHAESDLTRQSTFKQSKSEVSEWQEAWNEDGEKSKDQPPD 60

Query: 61  PHDEFWEKLKLAAEKKVGKVEAERFCSSFQQIHNKLVNEELSLDAAQTFLESFSS 116
            H EFW KLKLA E+KVGKVEAERFC+SFQQIHNKLVNEELSLDAA++FLESFSS
Sbjct: 61  LHGEFWMKLKLAVEQKVGKVEAERFCNSFQQIHNKLVNEELSLDAARSFLESFSS 115

[Close]

BLAST of Lag0010252 vs. NCBI nr
Match: KAG6605950.1 (hypothetical protein SDJN03_03267, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 187.6 bits (475), Expect = 6.3e-44
Identity = 96/115 (83.48%), Postives = 105/115 (91.30%), Query Frame = 0


Query: 1   MDEFEFRRLLQLFPVVRSPDYHAESELSRQSTSKASKSELSEWQETWNEGGEKSKDQVTE 60
           MDEFEFRRLLQLFPVVRSPD+HAES+L+RQST K SKSE+SEWQE WNE GEKSKDQ  +
Sbjct: 247 MDEFEFRRLLQLFPVVRSPDFHAESDLTRQSTFKQSKSEVSEWQEAWNEDGEKSKDQPPD 306

Query: 61  PHDEFWEKLKLAAEKKVGKVEAERFCSSFQQIHNKLVNEELSLDAAQTFLESFSS 116
            H EFW KLKLA E+KVGKVEAERFC+SFQQIHNKLVNEELSLDAA++FLESFSS
Sbjct: 307 LHGEFWMKLKLAVEQKVGKVEAERFCNSFQQIHNKLVNEELSLDAARSFLESFSS 361

The following BLAST results are available for this feature:

BLAST of Lag0010252 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023512799.1	2.0e-45	84.87	uncharacterized protein LOC111777433 isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_022944774.1	4.4e-45	84.03	uncharacterized protein LOC111449126 isoform X1 [Cucurbita moschata] >KAG7010307...	[more]
XP_022995173.1	7.5e-45	85.22	uncharacterized protein LOC111490791 [Cucurbita maxima]	[more]
XP_023532384.1	6.3e-44	83.48	uncharacterized protein LOC111794573 [Cucurbita pepo subsp. pepo]	[more]
KAG6605950.1	6.3e-44	83.48	hypothetical protein SDJN03_03267, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of Lag0010252 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..59
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 25..45
None	No IPR available	PANTHER	PTHR35312:SF1	OS07G0641800 PROTEIN	coord: 1..116
None	No IPR available	PANTHER	PTHR35312	OS07G0641800 PROTEIN	coord: 1..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0010252.1	Lag0010252.1	mRNA