Lag0010180 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0010180
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	histidine-containing phosphotransfer protein 5-like isoform X2
Location	chr9: 45235247 .. 45236281 (+)
RNA-Seq Expression	Lag0010180
Synteny	Lag0010180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTCTGTCCATTCTTAAGGGATTGCTCCAAGATTATGTGCAGTCTCTGCTTGATGAGGTGACTTGTTTCTCATCAATGGTTTCTTTTCCATTTCCATATATTTCTAGACAAGTTCCTCATCACTTTGAATGTTAGATATATTTTTACATCTTCAAATTATTAATCTAGTAGTGTCATGTCTTGTAGAGGATCGTTGATGAGAGGTTTTCACAGATTCTAATAAAATTTGAAGAGCCTGACTGTGTTCAATTGATCAATATATATCTCAACGATGTGGAATCAAGCTTATCAGAACTTAGTAGTGACATGTAAACTTCCTTTCAGAACTTCAAAAATGCATTTATCTTTTTCATTGTTGACTAATAGCTTTGAATATGCAGTGATTCTGTCGACGTCAATTTCTCTGAGTTGAGTGCGGTGGCTCACAGAATAGAGAAGAAAAGCACCCGGTAGTTTATCATTACTTAGATATCTGAATATATATTCTTTTGTTATACTTTCTATTTGAAATTTATCCAGGGACAATTATAATATAGAGTCCTTGTGAATCTAAGGATTTATTCATGATTCTCTTGGCTTTGGTGGCTTTCTGTTACTTAAGCATTTAGAAAATGGATGTGTGTATGTGGCAGCATTGGTGCACGGCACATGAAGCTTGCTTCTACCCATCTCATTCAAGCTTGTGATCAAGGGGACCAGAAAATGTGAGTAAAAAGAAAAATATTTACCACAACAAGTTTCTTCCCAAAGTTCTTAATTTCACAGAGATTCAAATATTTTGTTCACATTTTCTTTTAGCATATTTTGATAAACTATGTGCTTCCAGTGTCTCCCAAGCTCTTACTTGGATGAAGCATGAATTCACCATTACTCGAAACAAGCTTCAGCCAGTTCTTCAGGTTTAACAGAGTAATATCAATAGATCATCTCTAGTTTGTTGATGTTTTTGTTAAAATATAGTGAATTTCTTCTTGTCTTTTGTTATTGCAGATGGAACAGAGGATTTTAAGACTCATGAGCAAGCAAAAGTAG

mRNA sequence

ATGGCTCTGTCCATTCTTAAGGGATTGCTCCAAGATTATGTGCAGTCTCTGCTTGATGAGAGGATCGTTGATGAGAGGTTTTCACAGATTCTAATAAAATTTGAAGAGCCTGACTGTGTTCAATTGATCAATATATATCTCAACGATGTGGAATCAAGCTTATCAGAACTTAGTAGTGACATTGATTCTGTCGACGTCAATTTCTCTGAGTTGAGTGCGGTGGCTCACAGAATAGAGAAGAAAAGCACCCGCATTGGTGCACGGCACATGAAGCTTGCTTCTACCCATCTCATTCAAGCTTGTGATCAAGGGGACCAGAAAATTGTCTCCCAAGCTCTTACTTGGATGAAGCATGAATTCACCATTACTCGAAACAAGCTTCAGCCAGTTCTTCAGATGGAACAGAGGATTTTAAGACTCATGAGCAAGCAAAAGTAG

Coding sequence (CDS)

ATGGCTCTGTCCATTCTTAAGGGATTGCTCCAAGATTATGTGCAGTCTCTGCTTGATGAGAGGATCGTTGATGAGAGGTTTTCACAGATTCTAATAAAATTTGAAGAGCCTGACTGTGTTCAATTGATCAATATATATCTCAACGATGTGGAATCAAGCTTATCAGAACTTAGTAGTGACATTGATTCTGTCGACGTCAATTTCTCTGAGTTGAGTGCGGTGGCTCACAGAATAGAGAAGAAAAGCACCCGCATTGGTGCACGGCACATGAAGCTTGCTTCTACCCATCTCATTCAAGCTTGTGATCAAGGGGACCAGAAAATTGTCTCCCAAGCTCTTACTTGGATGAAGCATGAATTCACCATTACTCGAAACAAGCTTCAGCCAGTTCTTCAGATGGAACAGAGGATTTTAAGACTCATGAGCAAGCAAAAGTAG

Protein sequence

MALSILKGLLQDYVQSLLDERIVDERFSQILIKFEEPDCVQLINIYLNDVESSLSELSSDIDSVDVNFSELSAVAHRIEKKSTRIGARHMKLASTHLIQACDQGDQKIVSQALTWMKHEFTITRNKLQPVLQMEQRILRLMSKQK

Homology

[Close]

BLAST of Lag0010180 vs. NCBI nr
Match: XP_038901932.1 (uncharacterized protein LOC120088598 isoform X3 [Benincasa hispida])

HSP 1 Score: 226.5 bits (576), Expect = 1.5e-55
Identity = 119/145 (82.07%), Postives = 130/145 (89.66%), Query Frame = 0


Query: 1   MALSILKGLLQDYVQSLLDERIVDERFSQILIKFEEPDCVQLINIYLNDVESSLSELSSD 60
           MALSILK LLQDYVQSL +ER+VDERFSQIL KFEEPDC+QLI IYL DVES LSELS  
Sbjct: 1   MALSILKELLQDYVQSLTEERVVDERFSQILTKFEEPDCIQLIKIYLKDVESILSELSIT 60

Query: 61  IDSVDVNFSELSAVAHRIEKKSTRIGARHMKLASTHLIQACDQGDQKIVSQALTWMKHEF 120
           IDS+D NF +LS +A++IEKKSTRIGA HMKLA+ HLIQACDQGDQKIVSQAL+WMKHEF
Sbjct: 61  IDSMDGNFCKLSMLANKIEKKSTRIGAEHMKLAAIHLIQACDQGDQKIVSQALSWMKHEF 120

Query: 121 TITRNKLQPVLQMEQRILRLMSKQK 146
           TIT NK QPVLQMEQRILR+MSKQK
Sbjct: 121 TITENKFQPVLQMEQRILRVMSKQK 145

[Close]

BLAST of Lag0010180 vs. NCBI nr
Match: XP_016902253.1 (PREDICTED: uncharacterized protein LOC107991609 [Cucumis melo])

HSP 1 Score: 223.0 bits (567), Expect = 1.7e-54
Identity = 117/145 (80.69%), Postives = 131/145 (90.34%), Query Frame = 0


Query: 1   MALSILKGLLQDYVQSLLDERIVDERFSQILIKFEEPDCVQLINIYLNDVESSLSELSSD 60
           MALSILKGLLQDYVQSL++ERIV ERFSQIL KFEEPDC+QLINIYL DVES LSELSS 
Sbjct: 1   MALSILKGLLQDYVQSLIEERIVSERFSQILTKFEEPDCIQLINIYLKDVESILSELSST 60

Query: 61  IDSVDVNFSELSAVAHRIEKKSTRIGARHMKLASTHLIQACDQGDQKIVSQALTWMKHEF 120
           IDS D+NFS+LS +A +I+KKSTRIGA+HMKLAS  LI+ACD+ DQKIVSQA+ WMKHEF
Sbjct: 61  IDSSDLNFSKLSMLADKIDKKSTRIGAQHMKLASIRLIEACDKEDQKIVSQAVNWMKHEF 120

Query: 121 TITRNKLQPVLQMEQRILRLMSKQK 146
           TIT+NK QPVLQMEQRILR+MSK K
Sbjct: 121 TITQNKFQPVLQMEQRILRVMSKPK 145

[Close]

BLAST of Lag0010180 vs. NCBI nr
Match: KAG7035943.1 (Histidine-containing phosphotransfer protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 220.7 bits (561), Expect = 8.2e-54
Identity = 116/144 (80.56%), Postives = 128/144 (88.89%), Query Frame = 0


Query: 1   MALSILKGLLQDYVQSLLDERIVDERFSQILIKFEEPDCVQLINIYLNDVESSLSELSSD 60
           MAL ILKGLLQDYVQSLL+E+I+DERFSQI  K EEPD +QLIN+YLNDVES LSE S  
Sbjct: 1   MALPILKGLLQDYVQSLLNEKIIDERFSQIRTKLEEPDFIQLINVYLNDVESRLSEFSCF 60

Query: 61  IDSVDVNFSELSAVAHRIEKKSTRIGARHMKLASTHLIQACDQGDQKIVSQALTWMKHEF 120
           IDSVDVNFS+LS +AH+IE+KSTRIGARHMKLAS HLIQACD+ D K+VSQ+L WMKHEF
Sbjct: 61  IDSVDVNFSKLSLMAHKIEEKSTRIGARHMKLASIHLIQACDKEDHKLVSQSLCWMKHEF 120

Query: 121 TITRNKLQPVLQMEQRILRLMSKQ 145
             TRNKLQPVLQMEQRILRLMSKQ
Sbjct: 121 INTRNKLQPVLQMEQRILRLMSKQ 144

[Close]

BLAST of Lag0010180 vs. NCBI nr
Match: XP_022995151.1 (histidine-containing phosphotransfer protein 5-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 220.7 bits (561), Expect = 8.2e-54
Identity = 116/144 (80.56%), Postives = 128/144 (88.89%), Query Frame = 0


Query: 1   MALSILKGLLQDYVQSLLDERIVDERFSQILIKFEEPDCVQLINIYLNDVESSLSELSSD 60
           MAL ILKGLLQDYVQSLL+E+I+DERFSQI  K EEPD +QLIN+YLNDVES LSE S  
Sbjct: 34  MALPILKGLLQDYVQSLLNEKIIDERFSQIRTKLEEPDFIQLINVYLNDVESRLSEFSCF 93

Query: 61  IDSVDVNFSELSAVAHRIEKKSTRIGARHMKLASTHLIQACDQGDQKIVSQALTWMKHEF 120
           IDSVDVNFS+LS +AH+IE+KSTRIGARHMKLAS HLIQACD+ D K+VSQ+L WMKHEF
Sbjct: 94  IDSVDVNFSKLSMMAHKIEEKSTRIGARHMKLASIHLIQACDKEDHKLVSQSLCWMKHEF 153

Query: 121 TITRNKLQPVLQMEQRILRLMSKQ 145
             TRNKLQPVLQMEQRILRLMSKQ
Sbjct: 154 INTRNKLQPVLQMEQRILRLMSKQ 177

[Close]

BLAST of Lag0010180 vs. NCBI nr
Match: XP_022957714.1 (histidine-containing phosphotransfer protein 5-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 220.7 bits (561), Expect = 8.2e-54
Identity = 116/144 (80.56%), Postives = 128/144 (88.89%), Query Frame = 0


Query: 1   MALSILKGLLQDYVQSLLDERIVDERFSQILIKFEEPDCVQLINIYLNDVESSLSELSSD 60
           MAL ILKGLLQDYVQSLL+E+I+DERFSQI  K EEPD +QLIN+YLNDVES LSE S  
Sbjct: 23  MALPILKGLLQDYVQSLLNEKIIDERFSQIRTKLEEPDFIQLINVYLNDVESRLSEFSCF 82

Query: 61  IDSVDVNFSELSAVAHRIEKKSTRIGARHMKLASTHLIQACDQGDQKIVSQALTWMKHEF 120
           IDSVDVNFS+LS +AH+IE+KSTRIGARHMKLAS HLIQACD+ D K+VSQ+L WMKHEF
Sbjct: 83  IDSVDVNFSKLSLMAHKIEEKSTRIGARHMKLASIHLIQACDKEDHKLVSQSLCWMKHEF 142

Query: 121 TITRNKLQPVLQMEQRILRLMSKQ 145
             TRNKLQPVLQMEQRILRLMSKQ
Sbjct: 143 INTRNKLQPVLQMEQRILRLMSKQ 166

[Close]

BLAST of Lag0010180 vs. ExPASy Swiss-Prot
Match: Q6VAK4 (Histidine-containing phosphotransfer protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=AHP2 PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 8.4e-09
Identity = 40/149 (26.85%), Postives = 81/149 (54.36%), Query Frame = 0


Query: 1   MALSILKGLLQDYVQSLLDERIVDERFSQILIKFEE---PDCV-QLINIYLNDVESSLSE 60
           MA + L+  L   + S+  + +VDE+F Q+ +  +E   P  V +++ ++ +D +  ++E
Sbjct: 1   MAAAALRDQLTALLSSMFSQGLVDEQFQQLQMLQDEGGTPGFVSEVVTLFCDDADRIINE 60

Query: 61  LSSDIDSVDVNFSELSAVAHRIEKKSTRIGARHMKLASTHLIQACDQGDQKIVSQALTWM 120
           +++ ++   VNF ++ A  H+++  S  +GA+ +K       Q C    +     AL  +
Sbjct: 61  IATLLEQPVVNFDKVDAYVHQLKGSSASVGAQKVKFTCMQFRQFCQDKSRDGCLMALAVV 120

Query: 121 KHEFTITRNKLQPVLQMEQRILRLMSKQK 146
           +++F   RNK Q +LQ+EQ+I     KQ+
Sbjct: 121 RNDFYDLRNKFQTMLQLEQQIQAYDPKQQ 149

The following BLAST results are available for this feature:

BLAST of Lag0010180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901932.1	1.5e-55	82.07	uncharacterized protein LOC120088598 isoform X3 [Benincasa hispida]	[more]
XP_016902253.1	1.7e-54	80.69	PREDICTED: uncharacterized protein LOC107991609 [Cucumis melo]	[more]
KAG7035943.1	8.2e-54	80.56	Histidine-containing phosphotransfer protein 2, partial [Cucurbita argyrosperma ...	[more]
XP_022995151.1	8.2e-54	80.56	histidine-containing phosphotransfer protein 5-like isoform X2 [Cucurbita maxima...	[more]
XP_022957714.1	8.2e-54	80.56	histidine-containing phosphotransfer protein 5-like isoform X3 [Cucurbita moscha...	[more]

BLAST of Lag0010180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6VAK4	8.4e-09	26.85	Histidine-containing phosphotransfer protein 2 OS=Oryza sativa subsp. japonica O...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036641	HPT domain superfamily	GENE3D	1.20.120.160	HPT domain	coord: 1..139 e-value: 6.9E-30 score: 105.8
IPR036641	HPT domain superfamily	SUPERFAMILY	47226	Histidine-containing phosphotransfer domain, HPT domain	coord: 11..136
None	No IPR available	PANTHER	PTHR28242	FAMILY NOT NAMED	coord: 1..141
None	No IPR available	PANTHER	PTHR28242:SF7	CONTAINING PHOSPHOTRANSFER PROTEIN, PUTATIVE-RELATED	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0010180.1	Lag0010180.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009736	cytokinin-activated signaling pathway
biological_process	GO:0000160	phosphorelay signal transduction system
biological_process	GO:0006468	protein phosphorylation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005634	nucleus
molecular_function	GO:0009927	histidine phosphotransfer kinase activity
molecular_function	GO:0043424	protein histidine kinase binding