Lag0010172 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0010172
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr9: 45161422 .. 45162582 (+)
RNA-Seq Expression	Lag0010172
Synteny	Lag0010172

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATCAAATTCTGTGGAAGTTGGAGAATTCGGGAACCTTCATCAGCAAGTTTATGTTCAAAACTATGAATTTTGTGACTCCCAGAGTAAAGAAATCTCTAGCTGGTCTGATTTGGAAGCTCAGGGCCCGTTTGGTAACGTTTTCGTTTCTTGTTTCTTGTTTCCAATTTTATTAAGAAATCTAAACAATTAATAACTATATATGTTTCTTGTTTCTCATTTTTTAGAAACACTCCCAAAATTTGTATTGAACTTCTGGGAACAACTAAAACTAGTTTCTCATTTTTTGTTCTTGTTTCCAATTTTTTCCAAACATATATAAGAATATAGGTTTATTAGTATTGAATGTATATGTGTTATGGTCATGAAATTCTATTTTTCTTTATTAAAAATGAAGAAACGGAAACAAGAAACGAGAACGTTACCAAACAGGTTCTCAATTGCCCGAAAAAAAGTCAATTTTTCTTTTGGGAGGGGTGATTTACACCTCGGCCCCTTGGTTGTCATCGCCTTTTTTATATTTAATATTTTCCTTTTGATGTTTCTTATCAAAAAATAAATACGTTACAAATCATGAACTTCGTAGTTCTTGAATTTCTTGGCTTAGATTTGGAGTTTTCTGAAGTTGAATTACAACTACTTGACTTGGTTTAAAACATTTCGATAAGTCGCTGAAGGAAGAATGAACTTATTTGCCGAACAATTGAACCTTGATCTTGCTGGTTGGTTGGTTTCTAATGCTTAATTCGGCCAAACCAATTTGTCATTAAATTCACCAACAAACTTGAACTCAATGAATCAGATCATATTTGTTTTGTTCCGTTGAACTCTTAATCTAAACGTTGTCAGCCAATTTCTTGTGCTTTAACAAAACATAGCATATACGAGTTCCCAACCATCACATATGCTTTATGAGTTGAGTGGTAATGTTTGGCACAACACAACTTCTATACTAAGAGTCTATGATTGATGCTAACGGTATGATTCAGTTGACCATGGTATGGACAAAATTGAATAGACCAAAGATTGCCTCAGAGGATGTGAAGGTAGCCAAAAGACGATATCTCAAGGTGAGTATGCAAAATACCATCATACCAAGGGAGAAAACAAGGATATGTGGTCGTGGTTGTGGTCTTGGTCATGGTGTCTGTCTGTTGTAG

mRNA sequence

ATGGATCAAATTCTGTGGAAGTTGGAGAATTCGGGAACCTTCATCAGCAAGTTTATGTTCAAAACTATGAATTTTGTGACTCCCAGAGTAAAGAAATCTCTAGCTGGTCTGATTTGGAAGCTCAGGGCCCGTTTGTTGACCATGGTATGGACAAAATTGAATAGACCAAAGATTGCCTCAGAGGATGTGAAGGTAGCCAAAAGACGATATCTCAAGGTGAGTATGCAAAATACCATCATACCAAGGGAGAAAACAAGGATATGTGGTCGTGGTTGTGGTCTTGGTCATGGTGTCTGTCTGTTGTAG

Coding sequence (CDS)

ATGGATCAAATTCTGTGGAAGTTGGAGAATTCGGGAACCTTCATCAGCAAGTTTATGTTCAAAACTATGAATTTTGTGACTCCCAGAGTAAAGAAATCTCTAGCTGGTCTGATTTGGAAGCTCAGGGCCCGTTTGTTGACCATGGTATGGACAAAATTGAATAGACCAAAGATTGCCTCAGAGGATGTGAAGGTAGCCAAAAGACGATATCTCAAGGTGAGTATGCAAAATACCATCATACCAAGGGAGAAAACAAGGATATGTGGTCGTGGTTGTGGTCTTGGTCATGGTGTCTGTCTGTTGTAG

Protein sequence

MDQILWKLENSGTFISKFMFKTMNFVTPRVKKSLAGLIWKLRARLLTMVWTKLNRPKIASEDVKVAKRRYLKVSMQNTIIPREKTRICGRGCGLGHGVCLL

Homology

The following BLAST results are available for this feature:

BLAST of Lag0010172 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0010172 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 100..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0010172.1	Lag0010172.1	mRNA