Lag0010068 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0010068
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	60S ribosomal protein L12-like
Location	chr9: 44364683 .. 44365183 (-)
RNA-Seq Expression	Lag0010068
Synteny	Lag0010068

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCCGAAGTTCGATCCCTCGCAGGTCGTCGACGTCTTCGTTAGAGTCACCGGAGGTGAGGTCGGAGCGGCGAGTTCGCTCGCTCCGAAGATCGGACCTCTCGGTCTCTCCCCGAAGAAAATCGGAGAAGATATAGCCAAAGAGACAGCGAAGGAATGGAAGGGCCTTCGAGTAACAGTCAAGCTGACGGTCCAGAATCGTCAAGCGAAGGTATCGGTGGTGCCTTCCGCGGCGGCGCTGGTCATCAAGGCTCTAAAGGAGCCGGAGCGAGACCGGAAGAAGACGAAGAACATTAAGCACAACGGGAACATTTCGCTAGACGACGTGATCGAGATTGCGAGGATCATGCGGCCGAGATCAATGGCGAAAGATCTGTCAGGTACAGTGAAGGAGATATTGGGAACTTGTGTATCGGTTGGTTGTACTGTTGATGGGAAGGATCCTAAGGACCTACAGCAAGAGATTGGCGATGGTGATGTCGAAATCCCTCAGGATTGA

mRNA sequence

ATGCCGCCGAAGTTCGATCCCTCGCAGGTCGTCGACGTCTTCGTTAGAGTCACCGGAGGTGAGGTCGGAGCGGCGAGTTCGCTCGCTCCGAAGATCGGACCTCTCGGTCTCTCCCCGAAGAAAATCGGAGAAGATATAGCCAAAGAGACAGCGAAGGAATGGAAGGGCCTTCGAGTAACAGTCAAGCTGACGGTCCAGAATCGTCAAGCGAAGGTATCGGTGGTGCCTTCCGCGGCGGCGCTGGTCATCAAGGCTCTAAAGGAGCCGGAGCGAGACCGGAAGAAGACGAAGAACATTAAGCACAACGGGAACATTTCGCTAGACGACGTGATCGAGATTGCGAGGATCATGCGGCCGAGATCAATGGCGAAAGATCTGTCAGGTACAGTGAAGGAGATATTGGGAACTTGTGTATCGGTTGGTTGTACTGTTGATGGGAAGGATCCTAAGGACCTACAGCAAGAGATTGGCGATGGTGATGTCGAAATCCCTCAGGATTGA

Coding sequence (CDS)

ATGCCGCCGAAGTTCGATCCCTCGCAGGTCGTCGACGTCTTCGTTAGAGTCACCGGAGGTGAGGTCGGAGCGGCGAGTTCGCTCGCTCCGAAGATCGGACCTCTCGGTCTCTCCCCGAAGAAAATCGGAGAAGATATAGCCAAAGAGACAGCGAAGGAATGGAAGGGCCTTCGAGTAACAGTCAAGCTGACGGTCCAGAATCGTCAAGCGAAGGTATCGGTGGTGCCTTCCGCGGCGGCGCTGGTCATCAAGGCTCTAAAGGAGCCGGAGCGAGACCGGAAGAAGACGAAGAACATTAAGCACAACGGGAACATTTCGCTAGACGACGTGATCGAGATTGCGAGGATCATGCGGCCGAGATCAATGGCGAAAGATCTGTCAGGTACAGTGAAGGAGATATTGGGAACTTGTGTATCGGTTGGTTGTACTGTTGATGGGAAGGATCCTAAGGACCTACAGCAAGAGATTGGCGATGGTGATGTCGAAATCCCTCAGGATTGA

Protein sequence

MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVTVKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPRSMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD

Homology

[Close]

BLAST of Lag0010068 vs. NCBI nr
Match: XP_038900338.1 (60S ribosomal protein L12-3 [Benincasa hispida])

HSP 1 Score: 320.5 bits (820), Expect = 8.7e-84
Identity = 164/166 (98.80%), Postives = 166/166 (100.00%), Query Frame = 0


Query: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIA+IMRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAKIMRPR 120

Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 167
           SMAKDLSG+VKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 166

[Close]

BLAST of Lag0010068 vs. NCBI nr
Match: XP_022935531.1 (60S ribosomal protein L12-1-like [Cucurbita moschata] >XP_022983536.1 60S ribosomal protein L12-1-like [Cucurbita maxima] >XP_038903166.1 60S ribosomal protein L12-1 [Benincasa hispida] >KAG6580604.1 60S ribosomal protein L12-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017359.1 60S ribosomal protein L12-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.9 bits (816), Expect = 2.5e-83
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 167
           SMAKDLSG+VKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEIPQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEISDGDVEIPQD 166

[Close]

BLAST of Lag0010068 vs. NCBI nr
Match: XP_022950157.1 (60S ribosomal protein L12-3 [Cucurbita moschata] >XP_023005871.1 60S ribosomal protein L12-3 [Cucurbita maxima] >XP_023540179.1 60S ribosomal protein L12-3 [Cucurbita pepo subsp. pepo] >KAG6596472.1 60S ribosomal protein L12-1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028017.1 60S ribosomal protein L12-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 318.5 bits (815), Expect = 3.3e-83
Identity = 162/166 (97.59%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 167
           SMAKDLSG+VKEILGTCVSVGCTVDGKDPKDLQQEI DGDVE+PQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEINDGDVEVPQD 166

[Close]

BLAST of Lag0010068 vs. NCBI nr
Match: XP_038883892.1 (60S ribosomal protein L12-1-like [Benincasa hispida])

HSP 1 Score: 318.2 bits (814), Expect = 4.3e-83
Identity = 163/166 (98.19%), Postives = 165/166 (99.40%), Query Frame = 0


Query: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 167
           SMAKDLSG+VKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEIPQD
Sbjct: 121 SMAKDLSGSVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPQD 166

[Close]

BLAST of Lag0010068 vs. NCBI nr
Match: XP_022143990.1 (60S ribosomal protein L12-like [Momordica charantia])

HSP 1 Score: 318.2 bits (814), Expect = 4.3e-83
Identity = 163/166 (98.19%), Postives = 164/166 (98.80%), Query Frame = 0


Query: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIAR+MRPR
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARVMRPR 120

Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 167
           SMAKDL GTVKEILGTCVSVGCTVDGKDPKDLQQEI DGDVEIPQD
Sbjct: 121 SMAKDLGGTVKEILGTCVSVGCTVDGKDPKDLQQEITDGDVEIPQD 166

[Close]

BLAST of Lag0010068 vs. ExPASy Swiss-Prot
Match: P50883 (60S ribosomal protein L12-1 OS=Arabidopsis thaliana OX=3702 GN=RPL12A PE=2 SV=2)

HSP 1 Score: 298.9 bits (764), Expect = 3.6e-80
Identity = 150/166 (90.36%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPK DPSQ+VDV+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDV EIARIMRPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120

Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 167
           S+AK+LSGTV+EILGTCVSVGCTVDGKDPKD+QQEI DG+VEIP++
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDIQQEIQDGEVEIPEN 166

[Close]

BLAST of Lag0010068 vs. ExPASy Swiss-Prot
Match: Q9FF52 (60S ribosomal protein L12-3 OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.6e-80
Identity = 149/166 (89.76%), Postives = 160/166 (96.39%), Query Frame = 0


Query: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPK DPSQ+VDV+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDVIEIA+IMRPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVIEIAKIMRPR 120

Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 167
           S+AK+LSGTVKEILGTCVSVGCTVDGKDPKDLQ+EI  GD++IP +
Sbjct: 121 SIAKELSGTVKEILGTCVSVGCTVDGKDPKDLQEEINSGDIDIPNE 166

[Close]

BLAST of Lag0010068 vs. ExPASy Swiss-Prot
Match: O50003 (60S ribosomal protein L12 OS=Prunus armeniaca OX=36596 GN=RPL12 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.6e-80
Identity = 153/166 (92.17%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDPSQVVDV+VRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETA +WKGLRVT
Sbjct: 1   MPPKFDPSQVVDVYVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETANDWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKH+G+ISLDDVIEIA+IM+ R
Sbjct: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHSGHISLDDVIEIAKIMKHR 120

Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 167
           SMAK+L+GTVKEIL TCVSVGCTVDGKDPKDLQQEI DGDVEIP D
Sbjct: 121 SMAKELAGTVKEILRTCVSVGCTVDGKDPKDLQQEIADGDVEIPLD 166

[Close]

BLAST of Lag0010068 vs. ExPASy Swiss-Prot
Match: Q9LFH5 (60S ribosomal protein L12-2 OS=Arabidopsis thaliana OX=3702 GN=RPL12B PE=1 SV=1)

HSP 1 Score: 297.7 bits (761), Expect = 7.9e-80
Identity = 149/166 (89.76%), Postives = 161/166 (96.99%), Query Frame = 0


Query: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPK DPSQ+VDV+VRVTGGEVGAASSLAPKIGPLGL+PKKIGEDIAKETAKEWKGLRVT
Sbjct: 1   MPPKLDPSQIVDVYVRVTGGEVGAASSLAPKIGPLGLAPKKIGEDIAKETAKEWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLTVQNRQAKV+VVPSAAALVIKALKEPERDRKK KNIKHNGNIS DDV EIARIMRPR
Sbjct: 61  VKLTVQNRQAKVTVVPSAAALVIKALKEPERDRKKVKNIKHNGNISFDDVTEIARIMRPR 120

Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 167
           S+AK+LSGTV+EILGTCVSVGCTVDGKDPKDLQQEI +G++EIP++
Sbjct: 121 SIAKELSGTVREILGTCVSVGCTVDGKDPKDLQQEIQEGEIEIPEN 166

[Close]

BLAST of Lag0010068 vs. ExPASy Swiss-Prot
Match: P0CT83 (60S ribosomal protein L12-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=rpl1201 PE=3 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 7.2e-65
Identity = 122/166 (73.49%), Postives = 147/166 (88.55%), Query Frame = 0


Query: 1   MPPKFDPSQVVDVFVRVTGGEVGAASSLAPKIGPLGLSPKKIGEDIAKETAKEWKGLRVT 60
           MPPKFDP++V  +F+R  GGEV   S+LAPKIGPLGLSPKK+GEDIAK T K+WKGLRVT
Sbjct: 1   MPPKFDPNEVKTIFMRAVGGEVAGGSTLAPKIGPLGLSPKKVGEDIAKAT-KDWKGLRVT 60

Query: 61  VKLTVQNRQAKVSVVPSAAALVIKALKEPERDRKKTKNIKHNGNISLDDVIEIARIMRPR 120
           VKLT+QNRQA VSVVPSA+ALVIKALKEP RDRKK KN+ H+GN+SLD++IE+AR MR +
Sbjct: 61  VKLTIQNRQAAVSVVPSASALVIKALKEPARDRKKDKNVAHSGNVSLDEIIEVARTMRFK 120

Query: 121 SMAKDLSGTVKEILGTCVSVGCTVDGKDPKDLQQEIGDGDVEIPQD 167
           S+AK+LSGTVKEILGT  SVGCTVDGK+P D+Q+EI +G++EIPQ+
Sbjct: 121 SLAKELSGTVKEILGTAFSVGCTVDGKNPHDVQKEIDNGEIEIPQE 165

The following BLAST results are available for this feature:

BLAST of Lag0010068 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038900338.1	8.7e-84	98.80	60S ribosomal protein L12-3 [Benincasa hispida]	[more]
XP_022935531.1	2.5e-83	98.19	60S ribosomal protein L12-1-like [Cucurbita moschata] >XP_022983536.1 60S riboso...	[more]
XP_022950157.1	3.3e-83	97.59	60S ribosomal protein L12-3 [Cucurbita moschata] >XP_023005871.1 60S ribosomal p...	[more]
XP_038883892.1	4.3e-83	98.19	60S ribosomal protein L12-1-like [Benincasa hispida]	[more]
XP_022143990.1	4.3e-83	98.19	60S ribosomal protein L12-like [Momordica charantia]	[more]

BLAST of Lag0010068 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P50883	3.6e-80	90.36	60S ribosomal protein L12-1 OS=Arabidopsis thaliana OX=3702 GN=RPL12A PE=2 SV=2	[more]
Q9FF52	4.6e-80	89.76	60S ribosomal protein L12-3 OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=1	[more]
O50003	4.6e-80	92.17	60S ribosomal protein L12 OS=Prunus armeniaca OX=36596 GN=RPL12 PE=2 SV=1	[more]
Q9LFH5	7.9e-80	89.76	60S ribosomal protein L12-2 OS=Arabidopsis thaliana OX=3702 GN=RPL12B PE=1 SV=1	[more]
P0CT83	7.2e-65	73.49	60S ribosomal protein L12-A OS=Schizosaccharomyces pombe (strain 972 / ATCC 2484...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000911	Ribosomal protein L11/L12	SMART	SM00649	rl11c	coord: 13..145 e-value: 6.2E-58 score: 208.5
IPR000911	Ribosomal protein L11/L12	PANTHER	PTHR11661	60S RIBOSOMAL PROTEIN L12	coord: 1..166
IPR000911	Ribosomal protein L11/L12	HAMAP	MF_00736	Ribosomal_L11	coord: 9..146 score: 15.591871
IPR000911	Ribosomal protein L11/L12	CDD	cd00349	Ribosomal_L11	coord: 13..144 e-value: 7.52971E-53 score: 162.62
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	GENE3D	1.10.10.250		coord: 82..164 e-value: 1.6E-41 score: 142.4
IPR036769	Ribosomal protein L11, C-terminal domain superfamily	SUPERFAMILY	46906	Ribosomal protein L11, C-terminal domain	coord: 76..149
IPR020783	Ribosomal protein L11, C-terminal	PFAM	PF00298	Ribosomal_L11	coord: 75..144 e-value: 5.3E-17 score: 62.1
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	GENE3D	3.30.1550.10		coord: 1..81 e-value: 2.2E-35 score: 122.5
IPR036796	Ribosomal protein L11/L12, N-terminal domain superfamily	SUPERFAMILY	54747	Ribosomal L11/L12e N-terminal domain	coord: 1..87
IPR020784	Ribosomal protein L11, N-terminal	PFAM	PF03946	Ribosomal_L11_N	coord: 12..70 e-value: 1.5E-19 score: 69.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..166
None	No IPR available	PANTHER	PTHR11661:SF27	60S RIBOSOMAL PROTEIN L12	coord: 1..166
IPR020785	Ribosomal protein L11, conserved site	PROSITE	PS00359	RIBOSOMAL_L11	coord: 131..146

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0010068.1	Lag0010068.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0005840	ribosome
molecular_function	GO:0070180	large ribosomal subunit rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome