Lag0010039 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0010039
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr9: 44185758 .. 44187383 (-)
RNA-Seq ExpressionLag0010039
SyntenyLag0010039
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAGGAAAAGAACTGGAGGAAAACAAGAAGTTAGAGGAAACAAACGGAAATCAACCAACGGAAATATCTCTGACTAAGCAAATGTTGAAGCTTAATATCACAAAGGAAGAAAGAGGTAAGGTTACAGGTATGGACGACGACGAATTACGGCAGAAAGTCCAAGAGATGGAAAACGTCATGGTATGCAAGATTATGACGGAAAAACATATTAATCCAGAAATCTTTAAGGAAATGATCCCGAAGATATGGAACATGGAAAGGAAAGTTACGGTAAAGAAGGCAGGAGAAAACATCTTTGAATGTACTTTTGATTCTATGCGTGAGAAAAAGAAAGTGTTAGAAGGAAGCCCCTGGATACATGACAAAGCTCTCATTGTCTTTGAGGAAATCAAAGGAAATGAAAGATATTCAAGACTCCAATTCAGGTATGCCTCGTTTTGGGTTCATTTTGTTGATTTACCAAGAATCTGCTTCAGTAGGAAATGGGCTGAAGATCTGGGGAATGCAGTTGGAAGTTTTGAAAGAGTAGATTTGGACAAAGAGGAATACGAAGTTGGAGATTCTTTGCGGGTAAGAGTTAAGTTTGATATTAAAAAACCATTACGAAGGGGGACAGTGATTAGAATAGGAACGAACGCAGAAGAAGAATGGGTGGATATGAGATTTGAGAAGCTTCCGGAGTTCTGTTATGGATGCGGCCTGATTGGACACCTAGCTCGAGAATGTCAAGATAATGAAGCTGTAAACAGGGACAATCTGGAATATGGGGCTTGGCTAAAGAAGGAGCCCAGTCATAGGTACAAATTTGGAAATAGAAAAGAATTTGGGAAAAAAGACAATGAAAGGGGAAAAATGGGGAATAAACACGAGCAAGAAGGAAGGCCAGCGAAACAAACCGGTAACGGGTCAGAAGGGAGAAGAGAAAAAGAAAGGAAGAACTCGGAAAGAAAAGAACCGGAGAAGACAGATACCTCGCCGGAAAAAATGACCATTGAGCTACCGGAGGAACCAGTGCATACGACAAAAAAAACGGCCAGCCCAAAAATCCCAGCCTACAAGGAGATAATCATGGAAGACCAAAATCCAAGGATGTCAGAAATGGAAAAAGAGGAAATAGGAAAAGAAGCAATGGGAAGCGGTGGGGAATCGACTATTACCCACCAGATAAAAGATATTAAAGGGAAAGGAGTTCAAATATCAGAGGGATATGGCCAAACAATAAGGCCCAGGCGTGAAGGCCTAAATCGTGACCTGGGCCTAAAAATTAGAGAAAGTCATTCAAAAGAAAATGAGCAAAAGGAAATGGAAAAAGCCTTTAGGCAACACAGTGAAGAAAAGGGATTAAATGGTCGTAAAGGGATGGAAGCCAGCGAGAGACCCATGGAAATCAAGGTGGAGAAACCAAATGAACAAATCCAAGGTAAATCGTGGAAAAGGAGAGCTAGGGAAGCCTTAAGTAAAAGTTCTCAAACAAACGAATCTCAGACTAAGGGCACCAGCAGGAAGCATGAAAGAGAAGAGGAAATTGAGGAAAGTGGAAGAAAAAAAATGTGTGTTGAATACTTCGGGAAACCCGTTGGGATATCGGCGGAGGCTGAAATTCAGCCCCGCCGGACGCCATGA

mRNA sequence

ATGGAAGGAAAAGAACTGGAGGAAAACAAGAAGTTAGAGGAAACAAACGGAAATCAACCAACGGAAATATCTCTGACTAAGCAAATGTTGAAGCTTAATATCACAAAGGAAGAAAGAGGTAAGGTTACAGGTATGGACGACGACGAATTACGGCAGAAAGTCCAAGAGATGGAAAACGTCATGGTATGCAAGATTATGACGGAAAAACATATTAATCCAGAAATCTTTAAGGAAATGATCCCGAAGATATGGAACATGGAAAGGAAAGTTACGGTAAAGAAGGCAGGAGAAAACATCTTTGAATGTACTTTTGATTCTATGCGTGAGAAAAAGAAAGTGTTAGAAGGAAGCCCCTGGATACATGACAAAGCTCTCATTGTCTTTGAGGAAATCAAAGGAAATGAAAGATATTCAAGACTCCAATTCAGGTATGCCTCGTTTTGGGTTCATTTTGTTGATTTACCAAGAATCTGCTTCAGTAGGAAATGGGCTGAAGATCTGGGGAATGCAGTTGGAAGTTTTGAAAGAGTAGATTTGGACAAAGAGGAATACGAAGTTGGAGATTCTTTGCGGGTAAGAGTTAAGTTTGATATTAAAAAACCATTACGAAGGGGGACAGTGATTAGAATAGGAACGAACGCAGAAGAAGAATGGGTGGATATGAGATTTGAGAAGCTTCCGGAGTTCTGTTATGGATGCGGCCTGATTGGACACCTAGCTCGAGAATGTCAAGATAATGAAGCTGTAAACAGGGACAATCTGGAATATGGGGCTTGGCTAAAGAAGGAGCCCAGTCATAGGTACAAATTTGGAAATAGAAAAGAATTTGGGAAAAAAGACAATGAAAGGGGAAAAATGGGGAATAAACACGAGCAAGAAGGAAGGCCAGCGAAACAAACCGGTAACGGGTCAGAAGGGAGAAGAGAAAAAGAAAGGAAGAACTCGGAAAGAAAAGAACCGGAGAAGACAGATACCTCGCCGGAAAAAATGACCATTGAGCTACCGGAGGAACCAGTGCATACGACAAAAAAAACGGCCAGCCCAAAAATCCCAGCCTACAAGGAGATAATCATGGAAGACCAAAATCCAAGGATGTCAGAAATGGAAAAAGAGGAAATAGGAAAAGAAGCAATGGGAAGCGGTGGGGAATCGACTATTACCCACCAGATAAAAGATATTAAAGGGAAAGGAGTTCAAATATCAGAGGGATATGGCCAAACAATAAGGCCCAGGCGTGAAGGCCTAAATCGTGACCTGGGCCTAAAAATTAGAGAAAGTCATTCAAAAGAAAATGAGCAAAAGGAAATGGAAAAAGCCTTTAGGCAACACAGTGAAGAAAAGGGATTAAATGGTCGTAAAGGGATGGAAGCCAGCGAGAGACCCATGGAAATCAAGGTGGAGAAACCAAATGAACAAATCCAAGGTAAATCGTGGAAAAGGAGAGCTAGGGAAGCCTTAAGTAAAAGTTCTCAAACAAACGAATCTCAGACTAAGGGCACCAGCAGGAAGCATGAAAGAGAAGAGGAAATTGAGGAAAGTGGAAGAAAAAAAATGTGTGTTGAATACTTCGGGAAACCCGTTGGGATATCGGCGGAGGCTGAAATTCAGCCCCGCCGGACGCCATGA

Coding sequence (CDS)

ATGGAAGGAAAAGAACTGGAGGAAAACAAGAAGTTAGAGGAAACAAACGGAAATCAACCAACGGAAATATCTCTGACTAAGCAAATGTTGAAGCTTAATATCACAAAGGAAGAAAGAGGTAAGGTTACAGGTATGGACGACGACGAATTACGGCAGAAAGTCCAAGAGATGGAAAACGTCATGGTATGCAAGATTATGACGGAAAAACATATTAATCCAGAAATCTTTAAGGAAATGATCCCGAAGATATGGAACATGGAAAGGAAAGTTACGGTAAAGAAGGCAGGAGAAAACATCTTTGAATGTACTTTTGATTCTATGCGTGAGAAAAAGAAAGTGTTAGAAGGAAGCCCCTGGATACATGACAAAGCTCTCATTGTCTTTGAGGAAATCAAAGGAAATGAAAGATATTCAAGACTCCAATTCAGGTATGCCTCGTTTTGGGTTCATTTTGTTGATTTACCAAGAATCTGCTTCAGTAGGAAATGGGCTGAAGATCTGGGGAATGCAGTTGGAAGTTTTGAAAGAGTAGATTTGGACAAAGAGGAATACGAAGTTGGAGATTCTTTGCGGGTAAGAGTTAAGTTTGATATTAAAAAACCATTACGAAGGGGGACAGTGATTAGAATAGGAACGAACGCAGAAGAAGAATGGGTGGATATGAGATTTGAGAAGCTTCCGGAGTTCTGTTATGGATGCGGCCTGATTGGACACCTAGCTCGAGAATGTCAAGATAATGAAGCTGTAAACAGGGACAATCTGGAATATGGGGCTTGGCTAAAGAAGGAGCCCAGTCATAGGTACAAATTTGGAAATAGAAAAGAATTTGGGAAAAAAGACAATGAAAGGGGAAAAATGGGGAATAAACACGAGCAAGAAGGAAGGCCAGCGAAACAAACCGGTAACGGGTCAGAAGGGAGAAGAGAAAAAGAAAGGAAGAACTCGGAAAGAAAAGAACCGGAGAAGACAGATACCTCGCCGGAAAAAATGACCATTGAGCTACCGGAGGAACCAGTGCATACGACAAAAAAAACGGCCAGCCCAAAAATCCCAGCCTACAAGGAGATAATCATGGAAGACCAAAATCCAAGGATGTCAGAAATGGAAAAAGAGGAAATAGGAAAAGAAGCAATGGGAAGCGGTGGGGAATCGACTATTACCCACCAGATAAAAGATATTAAAGGGAAAGGAGTTCAAATATCAGAGGGATATGGCCAAACAATAAGGCCCAGGCGTGAAGGCCTAAATCGTGACCTGGGCCTAAAAATTAGAGAAAGTCATTCAAAAGAAAATGAGCAAAAGGAAATGGAAAAAGCCTTTAGGCAACACAGTGAAGAAAAGGGATTAAATGGTCGTAAAGGGATGGAAGCCAGCGAGAGACCCATGGAAATCAAGGTGGAGAAACCAAATGAACAAATCCAAGGTAAATCGTGGAAAAGGAGAGCTAGGGAAGCCTTAAGTAAAAGTTCTCAAACAAACGAATCTCAGACTAAGGGCACCAGCAGGAAGCATGAAAGAGAAGAGGAAATTGAGGAAAGTGGAAGAAAAAAAATGTGTGTTGAATACTTCGGGAAACCCGTTGGGATATCGGCGGAGGCTGAAATTCAGCCCCGCCGGACGCCATGA

Protein sequence

MEGKELEENKKLEETNGNQPTEISLTKQMLKLNITKEERGKVTGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIPKIWNMERKVTVKKAGENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQFRYASFWVHFVDLPRICFSRKWAEDLGNAVGSFERVDLDKEEYEVGDSLRVRVKFDIKKPLRRGTVIRIGTNAEEEWVDMRFEKLPEFCYGCGLIGHLARECQDNEAVNRDNLEYGAWLKKEPSHRYKFGNRKEFGKKDNERGKMGNKHEQEGRPAKQTGNGSEGRREKERKNSERKEPEKTDTSPEKMTIELPEEPVHTTKKTASPKIPAYKEIIMEDQNPRMSEMEKEEIGKEAMGSGGESTITHQIKDIKGKGVQISEGYGQTIRPRREGLNRDLGLKIRESHSKENEQKEMEKAFRQHSEEKGLNGRKGMEASERPMEIKVEKPNEQIQGKSWKRRAREALSKSSQTNESQTKGTSRKHEREEEIEESGRKKMCVEYFGKPVGISAEAEIQPRRTP
Homology
BLAST of Lag0010039 vs. NCBI nr
Match: KAF5469007.1 (hypothetical protein F2P56_013112 [Juglans regia])

HSP 1 Score: 164.5 bits (415), Expect = 2.6e-36
Identity = 83/239 (34.73%), Postives = 138/239 (57.74%), Query Frame = 0

Query: 25  LTKQMLKLNITKEERGKVTGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIPKIW 84
           L +Q   L++T++E  +V  +D + + + +   EN ++ +++T KH N E+FK+ + K+W
Sbjct: 5   LEEQYASLSLTEKESEEVV-VDINHVEEVLSSGENCLIMQLLTRKHYNHEVFKQTMRKVW 64

Query: 85  NMERKVTVKKAGENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQFRY 144
              + V ++    +     F+ +++K KVL   PW  DK L++ +E  G  +   L   +
Sbjct: 65  RTVKGVKIRDLNSDFSLAEFEDVKDKVKVLREGPWAFDKQLVLLKEFDGLVQAKGLTIVH 124

Query: 145 ASFWVHFVDLPRICFSRKWAEDLGNAVGSFERVDLDKEEYEVGDSLRVRVKFDIKKPLRR 204
             FWV   DLP +  +    + +G+ +G F  VDL K E+E G+ +RVRV  DI  PL+R
Sbjct: 125 VPFWVRIYDLPLMARNSYVGKLIGSLIGEFLEVDLAKGEFEWGEFMRVRVLLDISTPLQR 184

Query: 205 GTVIRIGTNAEEEWVDMRFEKLPEFCYGCGLIGHLARECQDNEAVNR--DNLEYGAWLK 262
              +++G +    WV + +E+LP+FCY CGL+GH  REC +  +VN   D L YGAWL+
Sbjct: 185 RKKLKLG-DENYCWVRLVYERLPDFCYQCGLLGHSLRECAEFISVNAEIDQLPYGAWLR 241

BLAST of Lag0010039 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 163.3 bits (412), Expect = 5.8e-36
Identity = 85/262 (32.44%), Postives = 143/262 (54.58%), Query Frame = 0

Query: 25  LTKQMLKLNITKEERGKVTGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIPKIW 84
           ++++  KL++  ++ G +  +      +  Q +   ++ K +T K IN E FK  I  IW
Sbjct: 6   ISRKCEKLSL-DDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTISTIW 65

Query: 85  NMERKVTVKKAGENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQFRY 144
             + +VT++  G NIF+  F +  ++K++LEG PW+ DK L+V  E  G+E+ + LQFRY
Sbjct: 66  QTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFRY 125

Query: 145 ASFWVHFVDLPRICFSRKWAEDLGNAVGSFERVDLDKEEYEVGDSLRVRVKFDIKKPLRR 204
             FW+   +LP  C +R+    LG  VG  + +D  +    VG  +R+RV  D+  PL+R
Sbjct: 126 VPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPLKR 185

Query: 205 GTVIRIGTNAEEEWVDMRFEKLPEFCYGCGLIGHLARECQDN--EAVNRDNLEYGAWLKK 264
           G  + +G + +   V + +E+LP FCY CG IGHL R+C  N  E  +  + ++G W++ 
Sbjct: 186 GLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGPWMRA 245

Query: 265 EPSHRYKFGNRKEFGKKDNERG 285
               R K    K+   + +  G
Sbjct: 246 VSRTRSKGTGEKKNSPEGSREG 266

BLAST of Lag0010039 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 159.8 bits (403), Expect = 6.4e-35
Identity = 85/239 (35.56%), Postives = 137/239 (57.32%), Query Frame = 0

Query: 32  LNITKEERGKV-TGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIPKIWNMERKV 91
           L++T EE   V  G +   L     +M   +V K++T +  N E  K  +  +W   + +
Sbjct: 12  LSLTSEEDAVVRIGGESTSLMMGKSDM--CLVGKLLTRRPFNVEAMKNTLLSVWQPTKGM 71

Query: 92  TVKKAGENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQFRYASFWVH 151
            V+  G+N+F   F  + +K++VL   PW  DK L++  E+  N + S +Q     FWVH
Sbjct: 72  QVRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLTRVQFWVH 131

Query: 152 FVDLPRICFSRKWAEDLGNAVGSFERVDLDKEEYEV--GDSLRVRVKFDIKKPLRRGTVI 211
             +LP +  ++K  E +GNAVG F  +D+D E+  +  G ++R+RV  D++KPLRRG  +
Sbjct: 132 VCNLPLVLMNKKVGEIVGNAVGQF--IDMDYEDGGIVWGRTMRIRVALDVRKPLRRGMKL 191

Query: 212 RIGTNAEEEWVDMRFEKLPEFCYGCGLIGHLARECQDN----EAVNRDNLEYGAWLKKE 264
            + ++AE  WVD ++E+LP +CY CG +GH  REC D     +    D+L+YGAWL+ +
Sbjct: 192 AL-SSAEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGAWLRMD 245

BLAST of Lag0010039 vs. NCBI nr
Match: XP_042988686.1 (uncharacterized protein LOC122316216 [Carya illinoinensis])

HSP 1 Score: 158.3 bits (399), Expect = 1.9e-34
Identity = 88/244 (36.07%), Postives = 133/244 (54.51%), Query Frame = 0

Query: 22  EISLTKQMLKLNITKEERGKVTGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIP 81
           E  L     +L++T++E   V  ++  +L +        +V  + TEKH N E FK  + 
Sbjct: 2   EADLDDLYQRLSLTEQENEAVV-VESGDLEESSLCNGKGLVLSLFTEKHFNREAFKVTMK 61

Query: 82  KIWNMERKVTVKKAGENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQ 141
           + W + R V  +    NIF   F+ +R+K+KVL   PW  DK L++ +E+ GN++  +++
Sbjct: 62  RAWRLVRGVKFRDLHSNIFLANFEDLRDKEKVLREGPWSFDKHLLLVQEVDGNKQVQQIK 121

Query: 142 FRYASFWVHFVDLPRICFSRKWAEDLGNAVGSFERVDLDKEEYEVGDSLRVRVKFDIKKP 201
            R ASFWV   DLP    + +    +G  +G    VDLD  E   GD LRVRV  DI+KP
Sbjct: 122 IREASFWVRLHDLPLRARNDRVGHRIGAKIGRVLEVDLDSGELAWGDFLRVRVSLDIRKP 181

Query: 202 LRRGTVIRIGTNAEEEWVDMRFEKLPEFCYGCGLIGHLARECQ-DNEAV---NRDNLEYG 261
           L RGT   +G   +  WV   +E+L  FC+ CG +GH  REC+   +AV   + D+  YG
Sbjct: 182 LLRGTRFSMGFE-DSCWVRFSYERLSTFCFYCGCLGHGDRECERKTQAVPGASDDSFPYG 241

BLAST of Lag0010039 vs. NCBI nr
Match: XP_028071384.1 (uncharacterized protein LOC114273772 [Camellia sinensis])

HSP 1 Score: 156.0 bits (393), Expect = 9.3e-34
Identity = 82/239 (34.31%), Postives = 135/239 (56.49%), Query Frame = 0

Query: 32  LNITKEERGKV-TGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIPKIWNMERKV 91
           L++T EE   V  G D   L     +M   +V K++T +  N E  K  +  +W   + +
Sbjct: 12  LSLTSEEDAVVRIGGDSTSLMMGKSDM--CLVSKLLTRRPFNVEAMKSTLLSVWQPTKGM 71

Query: 92  TVKKAGENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQFRYASFWVH 151
            V+  G+N+F   F  + +K+++L   PW  DK L++  E+  N + S +Q  +  FWVH
Sbjct: 72  QVRVIGDNLFVFVFGHVVDKRRILSNGPWTFDKHLLMLGEMDPNVQPSDIQLTWVQFWVH 131

Query: 152 FVDLPRICFSRKWAEDLGNAVGSFERVDLDKEEYEV--GDSLRVRVKFDIKKPLRRGTVI 211
             +LP I  ++K  + +GNAVG F  +D+D E+  +  G ++ +RV  D++KPLRRG  +
Sbjct: 132 VCNLPLILMNKKVGQIVGNAVGQF--IDMDYEDGGIAWGRTMLIRVALDVRKPLRRGMKL 191

Query: 212 RIGTNAEEEWVDMRFEKLPEFCYGCGLIGHLAREC----QDNEAVNRDNLEYGAWLKKE 264
            + ++ E  WVD ++E+LP +CY CG +GH  REC       +    D+L+YGAWL+ +
Sbjct: 192 AL-SSVEPIWVDFKYERLPIYCYFCGRLGHSDRECDAKLSSADGTRVDSLQYGAWLRMD 245

BLAST of Lag0010039 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 2.8e-36
Identity = 85/262 (32.44%), Postives = 143/262 (54.58%), Query Frame = 0

Query: 25  LTKQMLKLNITKEERGKVTGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIPKIW 84
           ++++  KL++  ++ G +  +      +  Q +   ++ K +T K IN E FK  I  IW
Sbjct: 6   ISRKCEKLSL-DDDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTISTIW 65

Query: 85  NMERKVTVKKAGENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQFRY 144
             + +VT++  G NIF+  F +  ++K++LEG PW+ DK L+V  E  G+E+ + LQFRY
Sbjct: 66  QTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFRY 125

Query: 145 ASFWVHFVDLPRICFSRKWAEDLGNAVGSFERVDLDKEEYEVGDSLRVRVKFDIKKPLRR 204
             FW+   +LP  C +R+    LG  VG  + +D  +    VG  +R+RV  D+  PL+R
Sbjct: 126 VPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPLKR 185

Query: 205 GTVIRIGTNAEEEWVDMRFEKLPEFCYGCGLIGHLARECQDN--EAVNRDNLEYGAWLKK 264
           G  + +G + +   V + +E+LP FCY CG IGHL R+C  N  E  +  + ++G W++ 
Sbjct: 186 GLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGPWMRA 245

Query: 265 EPSHRYKFGNRKEFGKKDNERG 285
               R K    K+   + +  G
Sbjct: 246 VSRTRSKGTGEKKNSPEGSREG 266

BLAST of Lag0010039 vs. ExPASy TrEMBL
Match: A0A5C7IW83 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001918 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 7.6e-34
Identity = 91/273 (33.33%), Postives = 141/273 (51.65%), Query Frame = 0

Query: 37  EERGKVTGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIPKIWNMERKVTVKKAG 96
           EE G V    + E+    ++++  +V K++T K +N E F+ +I +IW+   +V V+   
Sbjct: 17  EEDGVVLETSETEIEDGAKDVDCCLVGKVLTGKKVNREAFRSLIEQIWSPFGQVEVEVVA 76

Query: 97  ENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQFRYASFWVHFVDLPR 156
           +NIF   F    ++ +V +  PW   K+LIV E+ KG   YS+L F  A+FWV   D P 
Sbjct: 77  DNIFMFYFIKQEDRNRVWQRGPWHFGKSLIVLEKPKGTGNYSQLGFNKAAFWVQIHDTPI 136

Query: 157 ICFSRKWAEDLGNAVGSFERVDLDKEEYEVGDSLRVRVKFDIKKPLRRGTVIRIGTNAEE 216
           IC +R+ A+ +   +G    +  D +E   G  +RV+V  DI KPLRR   +++G   E 
Sbjct: 137 ICMNRRMAKWMAEQIGEVVEIPADSKEC-WGKFMRVKVCIDISKPLRRWLRLKLGKTEEI 196

Query: 217 EWVDMRFEKLPEFCYGCGLIGHLARECQD----NEAVNRDNLEYGAWLKKEPSHR-YKFG 276
             V +++E+LPEFCY CG +GH   EC D     +A+     +YGAWLK     + Y   
Sbjct: 197 TTVSLKYERLPEFCYACGRVGHGILECLDVDARKQALECTPTKYGAWLKALTGEKLYSRN 256

Query: 277 NRKEFGKKDNERGKMGNKHEQEGRPAKQTGNGS 305
           N + +G   +         E EG  +     GS
Sbjct: 257 NSQGYGSSSDRGRSTEGSREGEGDGSVSLRGGS 288

BLAST of Lag0010039 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 154.5 bits (389), Expect = 1.3e-33
Identity = 94/302 (31.13%), Postives = 155/302 (51.32%), Query Frame = 0

Query: 31  KLNITKEERGKVTGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIPKIWNMERKV 90
           K  +T EE      +D D ++   Q +   +V K++ ++ I+ ++   ++   W +E ++
Sbjct: 12  KFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAWKVEHQL 71

Query: 91  TVKKAGENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQFRYASFWVH 150
           TV+  G+N+F   F    +  +V++  PW  DKALIV ++   ++  S L+F   +FW+H
Sbjct: 72  TVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNRVAFWIH 131

Query: 151 FVDLPRICFSRKWAEDLGNAVGSFERVDLDKEEYEVGDSLRVRVKFDIKKPLRRGTVIRI 210
             DLP    ++  A  LGNA+G+F  VD +++ +  G SLR+RV  DI KPLRRG  I I
Sbjct: 132 LFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRRGIKINI 191

Query: 211 GTNAEEEWVDMRFEKLPEFCYGCGLIGHLARECQDNEAVNRDN----LEYGAWLKKEPSH 270
                  W+ +++E+LP+FCY CG+IGH + +C       +D+     EYG WL+   S 
Sbjct: 192 DGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCDARYLAAQDDSRATSEYGPWLRFVGS- 251

Query: 271 RYKFGNRKEFGKKDNERGKMGNKHEQEGRPAKQTGNGSEGRREKERKNSERKEPEKTDTS 329
                      K   ++G+ G        PA++   GS     KER   E K+     T+
Sbjct: 252 -----------KAGAQKGRKGKS------PAREDSCGSSSMNSKERGVEETKQQLSEQTN 295

BLAST of Lag0010039 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 4.2e-32
Identity = 76/241 (31.54%), Postives = 132/241 (54.77%), Query Frame = 0

Query: 24  SLTKQMLKLNITKEERGKVTGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIPKI 83
           +L ++     +T EE      +D   L    + +E  ++CK+++++ I+  + K  +   
Sbjct: 5   NLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKIA 64

Query: 84  WNMERKV-TVKKAGENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQF 143
           W ++ K  +V   G NIF   F+   ++ ++L   PW  D+ALI+ +      +   + F
Sbjct: 65  WKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMDF 124

Query: 144 RYASFWVHFVDLPRICFSRKWAEDLGNAVGSFERVDLDKEEYEVGDSLRVRVKFDIKKPL 203
           R  S WVHF DL   C ++  A  LGNA+G FE V+ +   +  G  LRVRV+FD+ KPL
Sbjct: 125 RNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKPL 184

Query: 204 RRGTVIRIGTNAEEEWVDMRFEKLPEFCYGCGLIGHLARECQD--NEAVNRDNLEYGAWL 262
            RG  + +       W+ +++E+LP+F Y CG + H+ ++C D   ++V++ NL+YG WL
Sbjct: 185 HRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSK-NLQYGPWL 244

BLAST of Lag0010039 vs. ExPASy TrEMBL
Match: A0A7N2R0C3 (Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-31
Identity = 80/283 (28.27%), Postives = 153/283 (54.06%), Query Frame = 0

Query: 31  KLNITKEERGKVTGMDDDELRQKVQEMENVMVCKIMTEKHINPEIFKEMIPKIWNMERKV 90
           +L +T+EE   +  + D+ +R  V+  +  +  K+M+ K +  E  ++ +  +W   + +
Sbjct: 11  RLKVTEEEEESIL-LGDECMRAAVERGKKCVFMKVMSRKGLMVEALRKNVRMLWKPNKSI 70

Query: 91  TVKKAGENIFECTFDSMREKKKVLEGSPWIHDKALIVFEEIKGNERYSRLQFRYASFWVH 150
            +   GE +F   F+  R+K++V++  PW ++K L++F+E +G+E    +  +++ FWV 
Sbjct: 71  QLSVIGEELFLVEFEDERDKRRVMDMRPWHYEKQLVLFKEFEGDESPKDILLKWSPFWVQ 130

Query: 151 FVDLPRICFSRKWAEDLGNAVGSFERVDLDKEEYEVGDSLRVRVKFDIKKPLRRGTVIRI 210
             +LP    +++  + +G ++G F  VD+++   + G  LRVRV+ D+ + L RG  I +
Sbjct: 131 IYNLPLKSRTKETGKAIGESIGKFIEVDVEETGVQWGTCLRVRVEIDVTRKLIRGRKINM 190

Query: 211 GTNAEEEWVDMRFEKLPEFCYGCGLIGHLARECQDNEAVNR----DNLEYGAWLKKEPSH 270
               E  WV  ++E+LP FCY CGL+ H  ++C +    ++     +L+YGAWL+ EP  
Sbjct: 191 -EKGETRWVHFKYERLPNFCYRCGLLDHDLKDCLEEPGKDKTGEESDLQYGAWLRGEPIR 250

Query: 271 R----YKFGNRKEFGKKDNERGKMGNKHEQEGRPAKQTGNGSE 306
           +    + F  +K  G+  N+        E++GR   Q G   E
Sbjct: 251 KGGWDFGFAKKKVIGEMKNKENT--KAAERKGRDEVQEGVARE 289

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAF5469007.12.6e-3634.73hypothetical protein F2P56_013112 [Juglans regia][more]
TXG54013.15.8e-3632.44hypothetical protein EZV62_019269 [Acer yangbiense][more]
XP_028122006.16.4e-3535.56uncharacterized protein LOC114319195 [Camellia sinensis][more]
XP_042988686.11.9e-3436.07uncharacterized protein LOC122316216 [Carya illinoinensis][more]
XP_028071384.19.3e-3434.31uncharacterized protein LOC114273772 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7H9Y22.8e-3632.44CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926... [more]
A0A5C7IW837.6e-3433.33CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00191... [more]
A0A6J1DU551.3e-3331.13uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1BSZ14.2e-3231.54uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A7N2R0C31.6e-3128.27Reverse transcriptase domain-containing protein OS=Quercus lobata OX=97700 PE=4 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 196..244
e-value: 6.8E-12
score: 44.9
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 52..194
e-value: 1.0E-20
score: 73.7
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..343
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 411..487
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 270..520
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 360..377
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..15
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 498..519
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 32..312
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 32..312
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 230..245
score: 9.702167

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0010039.1Lag0010039.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding