Lag0009802 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0009802
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Ycf54-like protein
Location	chr9: 42485867 .. 42487634 (+)
RNA-Seq Expression	Lag0009802
Synteny	Lag0009802

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTAGGCACTGTGAATCTAGTTATGGGCTCTTCTTCAGCCGCCATGGTTACTCCAACGCAGTCTGCTGCTGTGAAATCTCTTGCGAGCTCCAGAATTGGTCACCATAGCCACTGCCGAGCTCTTTCATTGCCTTTCGGATTGGCTTCTGCTTCTGGTTTTACCTCCTGCTTCTTGTCTTCACGAGGCTCTTCTTCGCCGTTCAATACAGCAATCGCCGCCGTTAACTCCGATCAAATCGTGTCCTCCGATCCGGCGGACAAGGTAATCGTTAGGTTTCCGAGCTTTTTCCGCATTTCGCTTGTCTTCAGTTTCTTAACTCCGACGATGTGCATTATTGTTCGAATTTAGGTATGAATTAATCGATGTATCAGGGGTTAGATTTTTCAAAATTGTTGATGTCCACGGAAATCTAGTGAAATTGTATGCATTTTCGAAGTTGAGACGCTTATGTTTGATCGCGATATCGATCCTAATTTTCCCTAGTTTATGTGTGTTTGCCCTATTTCGTTCTGGAAATTTGGGATTGTGGTAGCGAAGTTCACTGGTTTTATGATCTTCTCAATGCAGCAAGAATCGAACAAGTATTATTTTGTAGTTGCAAATGCAAAGTTCATGCTCGATGAGGAGGAGCATTTCAAGGAGCTTCTCTTTGAGCGGCTTCGCCACTATGGCGAACAAAACAAGGAGCAGGACTTTTGGCTGGTCATTGAGCCTAAGTTCTTGGAAAAGTTTCCTAATATCACCAAGAGATTGCAGAGACCTGCCGTTGCGCTTGTTTCAACCAATAGTACCTGGATTACGTAAGCTACCTCTTTTCTATTTGCATTATTGATTTATCTTTTCAATATTACATTATAAGTAAAGGGTGAGGATCCGAATTTACGACCTTACGAATAGGGACATAACACTAATGTCTAACCACTCGAATTATGCTTATGTCCCATCTGCATCATTTGCATTGGTATAGTTAGTTGTTGCAGCTCATTGGCTTGAATATTTTATCACGGAAAATTGATCGTCTGAGGCCTAATGGATCGTTAGCACACTTTTCGCTTATATAGAACTCGGAGTCGGAGTTTTTATTTAAGAGAAGTGAGACAATAATATGTTGTGTTTAGTTACAACAAGAAAAGGGATATGGAAAACTTGAAGAAGTGCTTGTTCTTGCACACATGACACAACTGGCTTGATCTTGAATATAATCAATAGCTGCAATGCATTTCAATTTTCCAGTATTTTGTTATTTGCATATGTTGACAGAATGACATTTACATTTACTCCATCTGTACTTTTGGTTGGTTTTTTGGTTTCCCTTTCTTTTCTTTAGATGCTGTAATGCAAATTTATCTTGTTCTGAAGTTGTTTAGCTACAGCAACTGAATCTCAACTCTGCCTTTTGTTACTTCGTATTAGATTCCGCTAGTCGATGCAATGTTCGATATCATAGTCGAGTTAAATGTTTACAACCACTGTAAAAGGACCTCAAAACTCGAACATTCTTGCATCTCCTGCATCAATGCCTTTGCTTGACAGCCCATTTTGGTCCATTTTTCTTGTTGGTATCGACAGGTTCATGAAGCTGAGACTGGACCGAGTTTTAGCCGAAAGTTACGAAGCCGATAGCTTAGAGGAAGCATTGGCTTCAAACCCGACCAACATCGAGTTTGAGAAGCCTGAAAAATGGGTGGCTCCCTATCCCAAGTATGAATATGGATGGTGGGAGACCTTCTTGCCGCCAGTGACAAAAGCAGAAGCAAAAGTATAA

mRNA sequence

ATGCTAGGCACTGTGAATCTAGTTATGGGCTCTTCTTCAGCCGCCATGGTTACTCCAACGCAGTCTGCTGCTGTGAAATCTCTTGCGAGCTCCAGAATTGGTCACCATAGCCACTGCCGAGCTCTTTCATTGCCTTTCGGATTGGCTTCTGCTTCTGGTTTTACCTCCTGCTTCTTGTCTTCACGAGGCTCTTCTTCGCCGTTCAATACAGCAATCGCCGCCGTTAACTCCGATCAAATCGTGTCCTCCGATCCGGCGGACAAGCAAGAATCGAACAAGTATTATTTTGTAGTTGCAAATGCAAAGTTCATGCTCGATGAGGAGGAGCATTTCAAGGAGCTTCTCTTTGAGCGGCTTCGCCACTATGGCGAACAAAACAAGGAGCAGGACTTTTGGCTGGTCATTGAGCCTAAGTTCTTGGAAAAGTTTCCTAATATCACCAAGAGATTGCAGAGACCTGCCGTTGCGCTTGTTTCAACCAATAGTACCTGGATTACGTTCATGAAGCTGAGACTGGACCGAGTTTTAGCCGAAAGTTACGAAGCCGATAGCTTAGAGGAAGCATTGGCTTCAAACCCGACCAACATCGAGTTTGAGAAGCCTGAAAAATGGGTGGCTCCCTATCCCAAGTATGAATATGGATGGTGGGAGACCTTCTTGCCGCCAGTGACAAAAGCAGAAGCAAAAGTATAA

Coding sequence (CDS)

ATGCTAGGCACTGTGAATCTAGTTATGGGCTCTTCTTCAGCCGCCATGGTTACTCCAACGCAGTCTGCTGCTGTGAAATCTCTTGCGAGCTCCAGAATTGGTCACCATAGCCACTGCCGAGCTCTTTCATTGCCTTTCGGATTGGCTTCTGCTTCTGGTTTTACCTCCTGCTTCTTGTCTTCACGAGGCTCTTCTTCGCCGTTCAATACAGCAATCGCCGCCGTTAACTCCGATCAAATCGTGTCCTCCGATCCGGCGGACAAGCAAGAATCGAACAAGTATTATTTTGTAGTTGCAAATGCAAAGTTCATGCTCGATGAGGAGGAGCATTTCAAGGAGCTTCTCTTTGAGCGGCTTCGCCACTATGGCGAACAAAACAAGGAGCAGGACTTTTGGCTGGTCATTGAGCCTAAGTTCTTGGAAAAGTTTCCTAATATCACCAAGAGATTGCAGAGACCTGCCGTTGCGCTTGTTTCAACCAATAGTACCTGGATTACGTTCATGAAGCTGAGACTGGACCGAGTTTTAGCCGAAAGTTACGAAGCCGATAGCTTAGAGGAAGCATTGGCTTCAAACCCGACCAACATCGAGTTTGAGAAGCCTGAAAAATGGGTGGCTCCCTATCCCAAGTATGAATATGGATGGTGGGAGACCTTCTTGCCGCCAGTGACAAAAGCAGAAGCAAAAGTATAA

Protein sequence

MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLSSRGSSSPFNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFERLRHYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESYEADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV

Homology

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BLAST of Lag0009802 vs. NCBI nr
Match: XP_022149576.1 (uncharacterized protein LOC111017973 [Momordica charantia])

HSP 1 Score: 406.8 bits (1044), Expect = 1.3e-109
Identity = 208/232 (89.66%), Postives = 220/232 (94.83%), Query Frame = 0


Query: 1   MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLS 60
           MLGTVNLVMGSSSAAMVTP Q AAVKSLAS+R  HH+HCR LSLP G A+ASG TSCFL 
Sbjct: 1   MLGTVNLVMGSSSAAMVTPAQFAAVKSLASARASHHTHCRTLSLPLGFANASGSTSCFLP 60

Query: 61  SRGS--SSPFNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFER 120
           SRGS  SSPF+TAIAAVNS+Q+VSSDPADKQE+NKYYF+VANAKFMLDEEEHFKELLFER
Sbjct: 61  SRGSSPSSPFSTAIAAVNSNQLVSSDPADKQEANKYYFLVANAKFMLDEEEHFKELLFER 120

Query: 121 LRHYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180
           LR+YGE+NKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE
Sbjct: 121 LRYYGERNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180

Query: 181 SYEADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 231
           SYEA+S EEA+ASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV
Sbjct: 181 SYEANSFEEAMASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 232

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BLAST of Lag0009802 vs. NCBI nr
Match: XP_022947359.1 (uncharacterized protein LOC111451246 [Cucurbita moschata])

HSP 1 Score: 391.7 bits (1005), Expect = 4.3e-105
Identity = 203/229 (88.65%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLS 60
           MLGTVNLVMGSSSAAM+T TQ  A+KSLAS RIGHHSHCR LSLP GL SASGF+SCF +
Sbjct: 1   MLGTVNLVMGSSSAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60

Query: 61  SRGSSSPFNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFERLR 120
           SRG SSPFNTAIAAVN DQIVSSD AD+QESNKYYFVVANAKFMLDEEEHF+ELLFERLR
Sbjct: 61  SRG-SSPFNTAIAAVN-DQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERLR 120

Query: 121 HYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESY 180
           +Y E++KEQDFWLVIEPKFLE+FPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESY
Sbjct: 121 YYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESY 180

Query: 181 EADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAK 230
           EADSLE+ALASNPTNIEFEKPEKWVAPYPKYEYGWWE FLPPVTK EA+
Sbjct: 181 EADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE 227

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BLAST of Lag0009802 vs. NCBI nr
Match: KAG6605371.1 (putative protein ycf54, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 388.3 bits (996), Expect = 4.7e-104
Identity = 201/229 (87.77%), Postives = 214/229 (93.45%), Query Frame = 0


Query: 1   MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLS 60
           MLGTVNLVMGSS+AAM+T TQ  A+KSLAS RIGHHSHCR LSLP GL SASGF+SCF +
Sbjct: 1   MLGTVNLVMGSSTAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60

Query: 61  SRGSSSPFNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFERLR 120
           SRG SSPFN AIAAVN DQIVSSD AD+QESNKYYFVVANAKFMLDEEEHF+ELLFERLR
Sbjct: 61  SRG-SSPFNRAIAAVN-DQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERLR 120

Query: 121 HYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESY 180
           +Y E++KEQDFWLVIEPKFLE+FPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESY
Sbjct: 121 YYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESY 180

Query: 181 EADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAK 230
           EADSLE+ALASNPTNIEFEKPEKWVAPYPKYEYGWWE FLPPVTK EA+
Sbjct: 181 EADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE 227

[Close]

BLAST of Lag0009802 vs. NCBI nr
Match: XP_022986936.1 (uncharacterized protein LOC111484525 [Cucurbita maxima])

HSP 1 Score: 386.7 bits (992), Expect = 1.4e-103
Identity = 202/233 (86.70%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 1   MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLS 60
           MLGTVNLVMGSSSAAM TPTQ AAVKSLASS+IG H+HCR  SLP GLASASG +S FLS
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSSFFLS 60

Query: 61  SRGSSSP---FNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFE 120
            RGSS     F TA+AAVNSDQIVSSD ADK+ESNKYYF+VANAKFMLDEEEHFKELLFE
Sbjct: 61  HRGSSLSFLRFKTAVAAVNSDQIVSSDSADKEESNKYYFLVANAKFMLDEEEHFKELLFE 120

Query: 121 RLRHYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLA 180
           RLR+YGE+NKEQDFWLVIEPKFL+KFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLA
Sbjct: 121 RLRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLA 180

Query: 181 ESYEADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 231
           ESYEA+SLEEALAS PTN+EFEKPEKWVAPY KYEYGWWE FLPPV KAEAKV
Sbjct: 181 ESYEANSLEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVAKAEAKV 233

[Close]

BLAST of Lag0009802 vs. NCBI nr
Match: XP_022944632.1 (uncharacterized protein LOC111449035 [Cucurbita moschata] >XP_023512536.1 uncharacterized protein LOC111777251 [Cucurbita pepo subsp. pepo] >XP_023512537.1 uncharacterized protein LOC111777251 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 386.3 bits (991), Expect = 1.8e-103
Identity = 202/232 (87.07%), Postives = 213/232 (91.81%), Query Frame = 0


Query: 1   MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLS 60
           MLGTVNLVMGSSSAAM TPTQ AAVKSLASS+IG H+HCR  SLP GLASASG ++ F S
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSAFFSS 60

Query: 61  SRGSSSP--FNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFER 120
            RGSS    FNTAIAAVNSDQIVSSD ADK+ESNKYYF+VANAKFMLDEEEHFKELLFER
Sbjct: 61  HRGSSLSLRFNTAIAAVNSDQIVSSDSADKEESNKYYFLVANAKFMLDEEEHFKELLFER 120

Query: 121 LRHYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180
           LR+YGE+NKEQDFWLVIEPKFL+KFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE
Sbjct: 121 LRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180

Query: 181 SYEADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 231
           SYEA+SLEEALAS PTN+EFEKPEKWVAPY KYEYGWWE FLPPV KAEAKV
Sbjct: 181 SYEANSLEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVAKAEAKV 232

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BLAST of Lag0009802 vs. ExPASy Swiss-Prot
Match: P72777 (Ycf54-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=slr1780 PE=1 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 9.5e-15
Identity = 49/102 (48.04%), Postives = 69/102 (67.65%), Query Frame = 0


Query: 94  YYFVVANAKFMLDEEEHFKELLFERLRHYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRP 153
           YY+ +A+ KF+L EEE F+E+L ER R YGE+NKE DFW VI+P FL        + + P
Sbjct: 31  YYYALASQKFLL-EEEPFEEVLKERRRDYGEKNKEIDFWQVIQPAFLNAPELAEAKAKAP 90

Query: 154 A--VALVSTNSTWITFMKLRLDRVLAESYEA--DSLEEALAS 192
              VA+VSTN ++I ++KLRL+ VL   +EA  D++ + LAS
Sbjct: 91  EKNVAIVSTNKSFIVWVKLRLEYVLTGEFEAPSDAIPDPLAS 131

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BLAST of Lag0009802 vs. ExPASy Swiss-Prot
Match: P51204 (Uncharacterized protein ycf54 OS=Porphyra purpurea OX=2787 GN=ycf54 PE=3 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.1e-10
Identity = 41/98 (41.84%), Postives = 60/98 (61.22%), Query Frame = 0


Query: 94  YYFVVANAKFMLDEEEHFKELLFERLRHYGEQNKEQDFWLVIEPKFLE-----KFPNITK 153
           YYF +A+  F+L EE   +E+  ER+ +Y   NKE DFWL+  PKFL      KF N+  
Sbjct: 4   YYFALASQNFLLSEEP-LEEVFRERINYYQSNNKEIDFWLIPNPKFLNKPAMIKFKNL-- 63

Query: 154 RLQRPAVALVSTNSTWITFMKLRLDRVLAESYEADSLE 187
            +   A+A++STNS +I ++KLR+  V    +E DSL+
Sbjct: 64  -VPNEAIAIISTNSIFINWLKLRIGYVCIGQFE-DSLK 96

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BLAST of Lag0009802 vs. ExPASy Swiss-Prot
Match: Q1XDT3 (Uncharacterized protein ycf54 OS=Pyropia yezoensis OX=2788 GN=ycf54 PE=3 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 36/95 (37.89%), Postives = 59/95 (62.11%), Query Frame = 0


Query: 94  YYFVVANAKFMLDEEEHFKELLFERLRHYGEQNKEQDFWLVIEPKFLEKFPNITKR--LQ 153
           YYF +A+  F+L  +E  +E+  ER+ +Y   NK  DFWL+  P FLEK   I+ +  + 
Sbjct: 4   YYFALASQNFLL-VQEPLEEVFRERVNYYQSNNKAIDFWLIPNPSFLEKPEMISFKNLVP 63

Query: 154 RPAVALVSTNSTWITFMKLRLDRVLAESYEADSLE 187
           + AVA++STN  +I ++KLR+  +    +E D+L+
Sbjct: 64  KDAVAIISTNPIFINWLKLRIGYICIGQFE-DNLQ 96

[Close]

BLAST of Lag0009802 vs. ExPASy Swiss-Prot
Match: O19890 (Uncharacterized protein ycf54 OS=Cyanidium caldarium OX=2771 GN=ycf54 PE=3 SV=1)

HSP 1 Score: 60.1 bits (144), Expect = 3.9e-08
Identity = 33/98 (33.67%), Postives = 54/98 (55.10%), Query Frame = 0


Query: 88  KQESNKYYFVVANAKFMLDEEEHFKELLFERLRHYGEQNKEQDFWLVIEPKFLEKFPNIT 147
           K + N YY++ A +K  L +EE  +E+L E+  H+   NK  DFW+    K     PN  
Sbjct: 2   KADYNTYYYIAA-SKHFLTQEEPLEEILREKTEHFIANNKSIDFWIFDSTKLNAHSPNEI 61

Query: 148 KRLQR----PAVALVSTNSTWITFMKLRLDRVLAESYE 182
           K LQ+    P + ++S+N  +IT++KLRL  +  +  +
Sbjct: 62  KTLQKTFFFPTILIISSNKKFITWLKLRLRYIFTDKIQ 98

[Close]

BLAST of Lag0009802 vs. ExPASy TrEMBL
Match: A0A6J1D8T3 (uncharacterized protein LOC111017973 OS=Momordica charantia OX=3673 GN=LOC111017973 PE=4 SV=1)

HSP 1 Score: 406.8 bits (1044), Expect = 6.2e-110
Identity = 208/232 (89.66%), Postives = 220/232 (94.83%), Query Frame = 0


Query: 1   MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLS 60
           MLGTVNLVMGSSSAAMVTP Q AAVKSLAS+R  HH+HCR LSLP G A+ASG TSCFL 
Sbjct: 1   MLGTVNLVMGSSSAAMVTPAQFAAVKSLASARASHHTHCRTLSLPLGFANASGSTSCFLP 60

Query: 61  SRGS--SSPFNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFER 120
           SRGS  SSPF+TAIAAVNS+Q+VSSDPADKQE+NKYYF+VANAKFMLDEEEHFKELLFER
Sbjct: 61  SRGSSPSSPFSTAIAAVNSNQLVSSDPADKQEANKYYFLVANAKFMLDEEEHFKELLFER 120

Query: 121 LRHYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180
           LR+YGE+NKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE
Sbjct: 121 LRYYGERNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180

Query: 181 SYEADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 231
           SYEA+S EEA+ASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV
Sbjct: 181 SYEANSFEEAMASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 232

[Close]

BLAST of Lag0009802 vs. ExPASy TrEMBL
Match: A0A6J1G6K2 (uncharacterized protein LOC111451246 OS=Cucurbita moschata OX=3662 GN=LOC111451246 PE=4 SV=1)

HSP 1 Score: 391.7 bits (1005), Expect = 2.1e-105
Identity = 203/229 (88.65%), Postives = 215/229 (93.89%), Query Frame = 0


Query: 1   MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLS 60
           MLGTVNLVMGSSSAAM+T TQ  A+KSLAS RIGHHSHCR LSLP GL SASGF+SCF +
Sbjct: 1   MLGTVNLVMGSSSAAMLTSTQCTAMKSLASFRIGHHSHCRPLSLPSGLPSASGFSSCFFA 60

Query: 61  SRGSSSPFNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFERLR 120
           SRG SSPFNTAIAAVN DQIVSSD AD+QESNKYYFVVANAKFMLDEEEHF+ELLFERLR
Sbjct: 61  SRG-SSPFNTAIAAVN-DQIVSSDSADEQESNKYYFVVANAKFMLDEEEHFRELLFERLR 120

Query: 121 HYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESY 180
           +Y E++KEQDFWLVIEPKFLE+FPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESY
Sbjct: 121 YYAERSKEQDFWLVIEPKFLERFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAESY 180

Query: 181 EADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAK 230
           EADSLE+ALASNPTNIEFEKPEKWVAPYPKYEYGWWE FLPPVTK EA+
Sbjct: 181 EADSLEQALASNPTNIEFEKPEKWVAPYPKYEYGWWEIFLPPVTKTEAE 227

[Close]

BLAST of Lag0009802 vs. ExPASy TrEMBL
Match: A0A6J1JCP0 (uncharacterized protein LOC111484525 OS=Cucurbita maxima OX=3661 GN=LOC111484525 PE=4 SV=1)

HSP 1 Score: 386.7 bits (992), Expect = 6.6e-104
Identity = 202/233 (86.70%), Postives = 213/233 (91.42%), Query Frame = 0


Query: 1   MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLS 60
           MLGTVNLVMGSSSAAM TPTQ AAVKSLASS+IG H+HCR  SLP GLASASG +S FLS
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSSFFLS 60

Query: 61  SRGSSSP---FNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFE 120
            RGSS     F TA+AAVNSDQIVSSD ADK+ESNKYYF+VANAKFMLDEEEHFKELLFE
Sbjct: 61  HRGSSLSFLRFKTAVAAVNSDQIVSSDSADKEESNKYYFLVANAKFMLDEEEHFKELLFE 120

Query: 121 RLRHYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLA 180
           RLR+YGE+NKEQDFWLVIEPKFL+KFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLA
Sbjct: 121 RLRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLA 180

Query: 181 ESYEADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 231
           ESYEA+SLEEALAS PTN+EFEKPEKWVAPY KYEYGWWE FLPPV KAEAKV
Sbjct: 181 ESYEANSLEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVAKAEAKV 233

[Close]

BLAST of Lag0009802 vs. ExPASy TrEMBL
Match: A0A6J1FW50 (uncharacterized protein LOC111449035 OS=Cucurbita moschata OX=3662 GN=LOC111449035 PE=4 SV=1)

HSP 1 Score: 386.3 bits (991), Expect = 8.7e-104
Identity = 202/232 (87.07%), Postives = 213/232 (91.81%), Query Frame = 0


Query: 1   MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLS 60
           MLGTVNLVMGSSSAAM TPTQ AAVKSLASS+IG H+HCR  SLP GLASASG ++ F S
Sbjct: 1   MLGTVNLVMGSSSAAMATPTQCAAVKSLASSKIGLHNHCRTFSLPLGLASASGSSAFFSS 60

Query: 61  SRGSSSP--FNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFER 120
            RGSS    FNTAIAAVNSDQIVSSD ADK+ESNKYYF+VANAKFMLDEEEHFKELLFER
Sbjct: 61  HRGSSLSLRFNTAIAAVNSDQIVSSDSADKEESNKYYFLVANAKFMLDEEEHFKELLFER 120

Query: 121 LRHYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180
           LR+YGE+NKEQDFWLVIEPKFL+KFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE
Sbjct: 121 LRNYGERNKEQDFWLVIEPKFLDKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180

Query: 181 SYEADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 231
           SYEA+SLEEALAS PTN+EFEKPEKWVAPY KYEYGWWE FLPPV KAEAKV
Sbjct: 181 SYEANSLEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVAKAEAKV 232

[Close]

BLAST of Lag0009802 vs. ExPASy TrEMBL
Match: A0A5A7SVU2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold104G00710 PE=4 SV=1)

HSP 1 Score: 345.9 bits (886), Expect = 1.3e-91
Identity = 187/232 (80.60%), Postives = 200/232 (86.21%), Query Frame = 0


Query: 1   MLGTVNLVMGSSSAAMVTPTQSAAVKSLASSRIGHHSHCRALSLPFGLASASGFTSCFLS 60
           MLGT NLVMGSSSAA+ T T  AAVKSL +S IGHH+     SLP  L S S F+SCFLS
Sbjct: 1   MLGTANLVMGSSSAAVATSTHFAAVKSLPTSGIGHHNRFPTPSLPLLLPSTSIFSSCFLS 60

Query: 61  SRGS--SSPFNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELLFER 120
           S  S  SSPFNTAIAAVNSD       ADKQES KYYF+VANAKFMLDEEEHFKELLFER
Sbjct: 61  SPLSSLSSPFNTAIAAVNSDS------ADKQESIKYYFLVANAKFMLDEEEHFKELLFER 120

Query: 121 LRHYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRVLAE 180
           LR+YGE+NKEQDFWLVIEPKFL+KFPNITKRL+RPAVALVST+STWITFMKLRLDRVLAE
Sbjct: 121 LRNYGERNKEQDFWLVIEPKFLDKFPNITKRLRRPAVALVSTDSTWITFMKLRLDRVLAE 180

Query: 181 SYEADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEAKV 231
           SYEA+S+EEALAS PTN+EFEKPEKWVAPY KYEYGWWE FLPPVTKAEAKV
Sbjct: 181 SYEANSIEEALASTPTNLEFEKPEKWVAPYSKYEYGWWEAFLPPVTKAEAKV 226

[Close]

BLAST of Lag0009802 vs. TAIR 10
Match: AT5G58250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2488 (InterPro:IPR019616); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 228.8 bits (582), Expect = 4.5e-60
Identity = 116/173 (67.05%), Postives = 136/173 (78.61%), Query Frame = 0


Query: 56  SCFLSSRGSSSPFNTAIAAVNSDQIVSSDPADKQESNKYYFVVANAKFMLDEEEHFKELL 115
           S  L S   SS F TA  ++     V     +K ES KY+F+VANAKFMLDEEEHF+E L
Sbjct: 43  SLSLPSSHFSSSFKTAATSIEQQSSV-----NKGESTKYHFLVANAKFMLDEEEHFQEQL 102

Query: 116 FERLRHYGEQNKEQDFWLVIEPKFLEKFPNITKRLQRPAVALVSTNSTWITFMKLRLDRV 175
           FERLR++GE+   QDFWLVIEPKFL+ FP IT+RL+RPAVALVSTN TWITFMKLRLDRV
Sbjct: 103 FERLRYFGERELVQDFWLVIEPKFLDNFPKITQRLRRPAVALVSTNGTWITFMKLRLDRV 162

Query: 176 LAESYEADSLEEALASNPTNIEFEKPEKWVAPYPKYEYGWWETFLPPVTKAEA 229
           L +S+EA SL+EALASNPT +EF+KP+ WVAPYPKYE GWW+TFLP VT+  A
Sbjct: 163 LYDSFEATSLDEALASNPTTLEFDKPKNWVAPYPKYEPGWWDTFLPKVTQESA 210

The following BLAST results are available for this feature:

BLAST of Lag0009802 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149576.1	1.3e-109	89.66	uncharacterized protein LOC111017973 [Momordica charantia]	[more]
XP_022947359.1	4.3e-105	88.65	uncharacterized protein LOC111451246 [Cucurbita moschata]	[more]
KAG6605371.1	4.7e-104	87.77	putative protein ycf54, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_022986936.1	1.4e-103	86.70	uncharacterized protein LOC111484525 [Cucurbita maxima]	[more]
XP_022944632.1	1.8e-103	87.07	uncharacterized protein LOC111449035 [Cucurbita moschata] >XP_023512536.1 unchar...	[more]

BLAST of Lag0009802 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P72777	9.5e-15	48.04	Ycf54-like protein OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN...	[more]
P51204	1.1e-10	41.84	Uncharacterized protein ycf54 OS=Porphyra purpurea OX=2787 GN=ycf54 PE=3 SV=1	[more]
Q1XDT3	1.3e-08	37.89	Uncharacterized protein ycf54 OS=Pyropia yezoensis OX=2788 GN=ycf54 PE=3 SV=1	[more]
O19890	3.9e-08	33.67	Uncharacterized protein ycf54 OS=Cyanidium caldarium OX=2771 GN=ycf54 PE=3 SV=1	[more]

BLAST of Lag0009802 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D8T3	6.2e-110	89.66	uncharacterized protein LOC111017973 OS=Momordica charantia OX=3673 GN=LOC111017...	[more]
A0A6J1G6K2	2.1e-105	88.65	uncharacterized protein LOC111451246 OS=Cucurbita moschata OX=3662 GN=LOC1114512...	[more]
A0A6J1JCP0	6.6e-104	86.70	uncharacterized protein LOC111484525 OS=Cucurbita maxima OX=3661 GN=LOC111484525...	[more]
A0A6J1FW50	8.7e-104	87.07	uncharacterized protein LOC111449035 OS=Cucurbita moschata OX=3662 GN=LOC1114490...	[more]
A0A5A7SVU2	1.3e-91	80.60	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]

BLAST of Lag0009802 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G58250.1	4.5e-60	67.05	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038409	Ycf54-like superfamily	GENE3D	3.30.70.1860	Uncharacterised protein family Ycf54	coord: 91..203 e-value: 1.9E-39 score: 136.0
IPR019616	Ycf54 protein	PFAM	PF10674	Ycf54	coord: 93..182 e-value: 1.8E-35 score: 121.1
IPR019616	Ycf54 protein	PANTHER	PTHR35319	FAMILY NOT NAMED	coord: 12..226

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0009802.1	Lag0009802.1	mRNA