Lag0009682 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0009682
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like
Location	chr9: 41415488 .. 41416066 (-)
RNA-Seq Expression	Lag0009682
Synteny	Lag0009682

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTGGTGAAAGAGGCAAAGAGTATGGTGAAGGATCGTCGAGCTCGCCTCCGACGACGACGACAACCCCGAGTCGATACGAGTCGCAGAAGCGGCGAGATTGGAACACTTTCGGGCAATACTTGAAGAATCAAAGACCTCCAGTGGCACTGTCTCAGTGCAACTTCAACCATGTGTTGGAGTTCCTAAGATACCTAGATCAATTTGGGAAGACAAAAGTTCATGTCCAAGGTTGTATGTTTTACGGGCAGCCAGAGCCACCTGCCCCTTGCACGTGCCCGCTGAAGCAAGCTTGGGGGAGCCTGGATGCTCTTATAGGGCGTTTGAGAGCTGCTTATGAAGAGAATGGTGGCTCCCCTGAGACTAACCCTTTTGCAAGTGCTTCTATAAGGGTTTATCTTAGAGAAGTTAGAGAGTGTCAAGCCAAAGCTAGAGGAATTCCTTATAAAAAGAAGAAGAAAACCAACAAGCCAACAACAACCAATTCAAATCATGATGATTCAACTTCAACTACAATTACTACTAATACTTCTTCTTCTTCTTCTTCTTCTGGGATCATGCACTTTTCAACTCCTTAG

mRNA sequence

ATGTCTGGTGAAAGAGGCAAAGAGTATGGTGAAGGATCGTCGAGCTCGCCTCCGACGACGACGACAACCCCGAGTCGATACGAGTCGCAGAAGCGGCGAGATTGGAACACTTTCGGGCAATACTTGAAGAATCAAAGACCTCCAGTGGCACTGTCTCAGTGCAACTTCAACCATGTGTTGGAGTTCCTAAGATACCTAGATCAATTTGGGAAGACAAAAGTTCATGTCCAAGGTTGTATGTTTTACGGGCAGCCAGAGCCACCTGCCCCTTGCACGTGCCCGCTGAAGCAAGCTTGGGGGAGCCTGGATGCTCTTATAGGGCGTTTGAGAGCTGCTTATGAAGAGAATGGTGGCTCCCCTGAGACTAACCCTTTTGCAAGTGCTTCTATAAGGGTTTATCTTAGAGAAGTTAGAGAGTGTCAAGCCAAAGCTAGAGGAATTCCTTATAAAAAGAAGAAGAAAACCAACAAGCCAACAACAACCAATTCAAATCATGATGATTCAACTTCAACTACAATTACTACTAATACTTCTTCTTCTTCTTCTTCTTCTGGGATCATGCACTTTTCAACTCCTTAG

Coding sequence (CDS)

ATGTCTGGTGAAAGAGGCAAAGAGTATGGTGAAGGATCGTCGAGCTCGCCTCCGACGACGACGACAACCCCGAGTCGATACGAGTCGCAGAAGCGGCGAGATTGGAACACTTTCGGGCAATACTTGAAGAATCAAAGACCTCCAGTGGCACTGTCTCAGTGCAACTTCAACCATGTGTTGGAGTTCCTAAGATACCTAGATCAATTTGGGAAGACAAAAGTTCATGTCCAAGGTTGTATGTTTTACGGGCAGCCAGAGCCACCTGCCCCTTGCACGTGCCCGCTGAAGCAAGCTTGGGGGAGCCTGGATGCTCTTATAGGGCGTTTGAGAGCTGCTTATGAAGAGAATGGTGGCTCCCCTGAGACTAACCCTTTTGCAAGTGCTTCTATAAGGGTTTATCTTAGAGAAGTTAGAGAGTGTCAAGCCAAAGCTAGAGGAATTCCTTATAAAAAGAAGAAGAAAACCAACAAGCCAACAACAACCAATTCAAATCATGATGATTCAACTTCAACTACAATTACTACTAATACTTCTTCTTCTTCTTCTTCTTCTGGGATCATGCACTTTTCAACTCCTTAG

Protein sequence

MSGERGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKTNKPTTTNSNHDDSTSTTITTNTSSSSSSSGIMHFSTP

Homology

[Close]

BLAST of Lag0009682 vs. NCBI nr
Match: XP_023534180.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 354.0 bits (907), Expect = 8.2e-94
Identity = 177/192 (92.19%), Postives = 183/192 (95.31%), Query Frame = 0


Query: 1   MSGERGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVL 60
           MS ERGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVAL+QCNFNHVL
Sbjct: 1   MSSERGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALAQCNFNHVL 60

Query: 61  EFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSP 120
           EFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE+GGSP
Sbjct: 61  EFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEEHGGSP 120

Query: 121 ETNPFASASIRVYLREVRECQAKARGIPYKKKKKTNKPTTTNSNHDDSTSTTITTNTSSS 180
           ETNPFASASIRVYLREVRECQAKARGIPYKKKKK+NK + TN+NHDDS     TTNT SS
Sbjct: 121 ETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKASNTNTNHDDS-----TTNTCSS 180

Query: 181 SSSSGIMHFSTP 193
           SSSSG+MHFSTP
Sbjct: 181 SSSSGMMHFSTP 187

[Close]

BLAST of Lag0009682 vs. NCBI nr
Match: XP_022947237.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita moschata] >XP_022970867.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita maxima] >KAG6604771.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma subsp. sororia] >KAG7034898.1 Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 352.1 bits (902), Expect = 3.1e-93
Identity = 176/192 (91.67%), Postives = 183/192 (95.31%), Query Frame = 0


Query: 1   MSGERGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVL 60
           MS ERGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVAL+QCNFNHVL
Sbjct: 1   MSSERGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALAQCNFNHVL 60

Query: 61  EFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSP 120
           EFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEE+GGSP
Sbjct: 61  EFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEEHGGSP 120

Query: 121 ETNPFASASIRVYLREVRECQAKARGIPYKKKKKTNKPTTTNSNHDDSTSTTITTNTSSS 180
           ETNPFASASIRVYLREVRECQAKARGIPYKKKKK++K + TN+NHDDS     TTNT SS
Sbjct: 121 ETNPFASASIRVYLREVRECQAKARGIPYKKKKKSSKASNTNTNHDDS-----TTNTCSS 180

Query: 181 SSSSGIMHFSTP 193
           SSSSG+MHFSTP
Sbjct: 181 SSSSGMMHFSTP 187

[Close]

BLAST of Lag0009682 vs. NCBI nr
Match: XP_008448236.1 (PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >XP_016900524.1 PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >TYK04855.1 protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa])

HSP 1 Score: 323.2 bits (827), Expect = 1.6e-84
Identity = 170/201 (84.58%), Postives = 176/201 (87.56%), Query Frame = 0


Query: 1   MSGE------RGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC 60
           MSGE        KEYGEGSS+SPP T TTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC
Sbjct: 1   MSGEGVVGDRSSKEYGEGSSNSPP-TATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC 60

Query: 61  NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE 120
           NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE
Sbjct: 61  NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE 120

Query: 121 ENGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKTNK---PTTTNSNHDDSTST 180
           ENGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKK+NK   PT  N+ ++     
Sbjct: 121 ENGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKSNKQQQPTNNNNTNNLLIDD 180

Query: 181 TITTNTSSSSSSSGIMHFSTP 193
           + TTN  SSSSSS IMHFSTP
Sbjct: 181 STTTNNISSSSSSSIMHFSTP 200

[Close]

BLAST of Lag0009682 vs. NCBI nr
Match: XP_038900865.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida])

HSP 1 Score: 322.8 bits (826), Expect = 2.0e-84
Identity = 165/187 (88.24%), Postives = 168/187 (89.84%), Query Frame = 0


Query: 7   KEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYL 66
           KEYGEGSSSSPPTT TTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYL
Sbjct: 4   KEYGEGSSSSPPTTATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYL 63

Query: 67  DQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFA 126
           DQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPE+NPFA
Sbjct: 64  DQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPESNPFA 123

Query: 127 SASIRVYLREVRECQAKARGIPYKKKKKTNKP-TTTNSNHDDSTSTTITTNTSSSSSSSG 186
           SASIRVYLREVRECQAKARGIPYKKKKK+NK    TN   DDST+ T         SSS 
Sbjct: 124 SASIRVYLREVRECQAKARGIPYKKKKKSNKANNNTNLLVDDSTNNT---------SSSS 181

Query: 187 IMHFSTP 193
           IMHFSTP
Sbjct: 184 IMHFSTP 181

[Close]

BLAST of Lag0009682 vs. NCBI nr
Match: KAA0062179.1 (protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa])

HSP 1 Score: 322.4 bits (825), Expect = 2.7e-84
Identity = 170/203 (83.74%), Postives = 176/203 (86.70%), Query Frame = 0


Query: 1   MSGE------RGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC 60
           MSGE        KEYGEGSS+SPPT  TTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC
Sbjct: 1   MSGEGVVGDRSSKEYGEGSSNSPPTAATTPSRYESQKRRDWNTFGQYLKNQRPPVALSQC 60

Query: 61  NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE 120
           NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE
Sbjct: 61  NFNHVLEFLRYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYE 120

Query: 121 ENGGSPETNPFASASIRVYLREVRECQAKARGIPY--KKKKKTNK---PTTTNSNHDDST 180
           ENGGSPETNPFASASIRVYLREVRECQAKARGIPY  KKKKK+NK   PT  N+ ++   
Sbjct: 121 ENGGSPETNPFASASIRVYLREVRECQAKARGIPYKKKKKKKSNKQQQPTNNNNTNNLLI 180

Query: 181 STTITTNTSSSSSSSGIMHFSTP 193
             + TTN  SSSSSS IMHFSTP
Sbjct: 181 DDSTTTNNISSSSSSSIMHFSTP 203

[Close]

BLAST of Lag0009682 vs. ExPASy Swiss-Prot
Match: Q9S7R3 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=LSH10 PE=1 SV=1)

HSP 1 Score: 271.2 bits (692), Expect = 9.2e-72
Identity = 133/169 (78.70%), Postives = 142/169 (84.02%), Query Frame = 0


Query: 4   ERGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFL 63
           ERGK   E S S PP    TPSRYESQKRRDWNTFGQYLKNQRPPV +S C+ NHVL+FL
Sbjct: 6   ERGKSLMESSGSEPP---VTPSRYESQKRRDWNTFGQYLKNQRPPVPMSHCSCNHVLDFL 65

Query: 64  RYLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETN 123
           RYLDQFGKTKVHV GCMFYGQPEPPAPCTCPL+QAWGSLDALIGRLRAAYEENGG PETN
Sbjct: 66  RYLDQFGKTKVHVPGCMFYGQPEPPAPCTCPLRQAWGSLDALIGRLRAAYEENGGPPETN 125

Query: 124 PFASASIRVYLREVRECQAKARGIPYKKKKKTNKPTTTNSNHDDSTSTT 173
           PFAS +IRVYLREVRECQAKARGIPYKKKKK           +DS+S++
Sbjct: 126 PFASGAIRVYLREVRECQAKARGIPYKKKKKKKPTPEMGGGREDSSSSS 171

[Close]

BLAST of Lag0009682 vs. ExPASy Swiss-Prot
Match: Q9LMK2 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LSH6 PE=1 SV=1)

HSP 1 Score: 229.2 bits (583), Expect = 4.0e-59
Identity = 115/181 (63.54%), Postives = 139/181 (76.80%), Query Frame = 0


Query: 5   RGKEYGEGSSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLR 64
           +G + G    SSPP    TPSRYESQKRRDWNTF QYLKN +PP+ALS+C+  HV+EFL+
Sbjct: 13  KGDDPGPSFVSSPP---ATPSRYESQKRRDWNTFLQYLKNHKPPLALSRCSGAHVIEFLK 72

Query: 65  YLDQFGKTKVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNP 124
           YLDQFGKTKVHV  C ++G  +PP+PC+CPLKQAWGSLDALIGRLRAAYEENGG P++NP
Sbjct: 73  YLDQFGKTKVHVAACPYFGHQQPPSPCSCPLKQAWGSLDALIGRLRAAYEENGGRPDSNP 132

Query: 125 FASASIRVYLREVRECQAKARGIPYKKKKKTNKPTTTNSNHDDSTSTTITTNTSSSSSSS 184
           FA+ ++R+YLREVRE QAKARGIPY+KKK+   PT           TT+  + +SS  S 
Sbjct: 133 FAARAVRIYLREVRESQAKARGIPYEKKKRKRPPTV----------TTVRVDVASSRQSD 180

Query: 185 G 186
           G
Sbjct: 193 G 180

[Close]

BLAST of Lag0009682 vs. ExPASy Swiss-Prot
Match: Q9SN52 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LSH9 PE=1 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 8.9e-59
Identity = 107/139 (76.98%), Postives = 121/139 (87.05%), Query Frame = 0


Query: 17  PPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLDQFGKTKVHV 76
           PP      SRYESQKRRDWNTF QYLK+Q PP+ +SQ ++ HVL FLRYLDQFGKTKVH 
Sbjct: 28  PPQPQQPLSRYESQKRRDWNTFVQYLKSQNPPLMMSQFDYTHVLSFLRYLDQFGKTKVHH 87

Query: 77  QGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEEN-GGSPETNPFASASIRVYLR 136
           Q C+F+GQP+PP PCTCPLKQAWGSLDALIGRLRAAYEE+ GGSP+TNPFA+ SIRV+LR
Sbjct: 88  QACVFFGQPDPPGPCTCPLKQAWGSLDALIGRLRAAYEEHGGGSPDTNPFANGSIRVHLR 147

Query: 137 EVRECQAKARGIPYKKKKK 155
           EVRE QAKARGIPY+KKK+
Sbjct: 148 EVRESQAKARGIPYRKKKR 166

[Close]

BLAST of Lag0009682 vs. ExPASy Swiss-Prot
Match: Q9LW68 (Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LSH4 PE=1 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-58
Identity = 106/146 (72.60%), Postives = 123/146 (84.25%), Query Frame = 0


Query: 13  SSSSPPTTTTTPSRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLDQFGKT 72
           SSSS  + T   SRYE+QKRRDWNTFGQYL+N RPP++LS+C+  HVLEFLRYLDQFGKT
Sbjct: 35  SSSSGGSGTNQLSRYENQKRRDWNTFGQYLRNHRPPLSLSRCSGAHVLEFLRYLDQFGKT 94

Query: 73  KVHVQGCMFYGQPEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFASASIRV 132
           KVH   C F+G P PPAPC CPL+QAWGSLDALIGRLRAA+EENGGSPETNPF + ++R+
Sbjct: 95  KVHTHLCPFFGHPNPPAPCACPLRQAWGSLDALIGRLRAAFEENGGSPETNPFGARAVRL 154

Query: 133 YLREVRECQAKARGIPYKKKKKTNKP 159
           YLREVR+ QAKARGI Y+KKK+   P
Sbjct: 155 YLREVRDSQAKARGISYEKKKRKRPP 180

[Close]

BLAST of Lag0009682 vs. ExPASy Swiss-Prot
Match: Q6ATW6 (Protein G1-like8 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L8 PE=1 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 9.9e-58
Identity = 99/130 (76.15%), Postives = 117/130 (90.00%), Query Frame = 0


Query: 25  SRYESQKRRDWNTFGQYLKNQRPPVALSQCNFNHVLEFLRYLDQFGKTKVHVQGCMFYGQ 84
           SRYESQKRRDWNTF QYLKN RPP+ L++C+  HV+EFL+YLDQFGKTKVH  GC +YGQ
Sbjct: 29  SRYESQKRRDWNTFLQYLKNHRPPLTLARCSGAHVIEFLKYLDQFGKTKVHASGCAYYGQ 88

Query: 85  PEPPAPCTCPLKQAWGSLDALIGRLRAAYEENGGSPETNPFASASIRVYLREVRECQAKA 144
           P PPAPC CPL+QAWGSLDALIGRLRAAYEE+G +PE+NPFA+ ++R+YLREVR+ QAKA
Sbjct: 89  PSPPAPCPCPLRQAWGSLDALIGRLRAAYEESGHAPESNPFAARAVRIYLREVRDAQAKA 148

Query: 145 RGIPYKKKKK 155
           RGIPY+KKK+
Sbjct: 149 RGIPYEKKKR 158

The following BLAST results are available for this feature:

BLAST of Lag0009682 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023534180.1	8.2e-94	92.19	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita pepo subsp. pepo]	[more]
XP_022947237.1	3.1e-93	91.67	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucurbita moschata] >XP_022970...	[more]
XP_008448236.1	1.6e-84	84.58	PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo] >XP_0...	[more]
XP_038900865.1	2.0e-84	88.24	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Benincasa hispida]	[more]
KAA0062179.1	2.7e-84	83.74	protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10-like [Cucumis melo var. makuwa]	[more]

BLAST of Lag0009682 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9S7R3	9.2e-72	78.70	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10 OS=Arabidopsis thaliana OX=3702 GN=L...	[more]
Q9LMK2	4.0e-59	63.54	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 6 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
Q9SN52	8.9e-59	76.98	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 9 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
Q9LW68	1.5e-58	72.60	Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 OS=Arabidopsis thaliana OX=3702 GN=LS...	[more]
Q6ATW6	9.9e-58	76.15	Protein G1-like8 OS=Oryza sativa subsp. japonica OX=39947 GN=G1L8 PE=1 SV=1	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006936	ALOG domain	PFAM	PF04852	DUF640	coord: 21..139 e-value: 7.0E-65 score: 216.9
IPR006936	ALOG domain	PROSITE	PS51697	ALOG	coord: 26..153 score: 79.186714
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 12..26
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..192
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 161..192
None	No IPR available	PANTHER	PTHR31165:SF10	PROTEIN LIGHT-DEPENDENT SHORT HYPOCOTYLS 10	coord: 1..171
IPR040222	ALOG family	PANTHER	PTHR31165	PROTEIN G1-LIKE2	coord: 1..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0009682.1	Lag0009682.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009299	mRNA transcription
biological_process	GO:0009416	response to light stimulus
cellular_component	GO:0005634	nucleus