Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCTAAATTAGAAAAATTGCAAACTAGACGGCCTGGATCTTTATCCGTGGCCGAGACTCTAGCAAAATGGAAAGATTACAATGATCACCTTGATTCATGTAATGAAGAGGCCAAACTCACCCGTAAAGTTCCAGCCAAGGGATCAAAGAAGGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATTTGCGATGTAATTACAGAGGAGTGAGGCAAAGGACATGGGGGAAATGGGTTGCAGAAATTCGGGCACCGAATAGGGGAAGTCGGCTCTGGTTGGGTACATTTCCATCTGCCATTGATGCTGCTCTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCAGTTTAGCTCGCCTCAATTTTCCCAACATCTCAATTCCAACCTTGCTAAAAGAAAAAGAACCATCAACAAAGGATTCCCCTGAAGTCAAGAGGTCATCAATCTCTTCTTTAGGGTCAACTTCACTTAGTCTGAGTTCTGAGTCCACAATAACATCATCAGATCACTCTGAGGATTGTGCAGGTGAAGATGTCTAG
mRNA sequence
ATGCCTAAATTAGAAAAATTGCAAACTAGACGGCCTGGATCTTTATCCGTGGCCGAGACTCTAGCAAAATGGAAAGATTACAATGATCACCTTGATTCATGTAATGAAGAGGCCAAACTCACCCGTAAAGTTCCAGCCAAGGGATCAAAGAAGGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATTTGCGATGTAATTACAGAGGAGTGAGGCAAAGGACATGGGGGAAATGGGTTGCAGAAATTCGGGCACCGAATAGGGGAAGTCGGCTCTGGTTGGGTACATTTCCATCTGCCATTGATGCTGCTCTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCAGTTTAGCTCGCCTCAATTTTCCCAACATCTCAATTCCAACCTTGCTAAAAGAAAAAGAACCATCAACAAAGGATTCCCCTGAAGTCAAGAGGTCATCAATCTCTTCTTTAGGGTCAACTTCACTTAGTCTGAGTTCTGAGTCCACAATAACATCATCAGATCACTCTGAGGATTGTGCAGGTGAAGATGTCTAG
Coding sequence (CDS)
ATGCCTAAATTAGAAAAATTGCAAACTAGACGGCCTGGATCTTTATCCGTGGCCGAGACTCTAGCAAAATGGAAAGATTACAATGATCACCTTGATTCATGTAATGAAGAGGCCAAACTCACCCGTAAAGTTCCAGCCAAGGGATCAAAGAAGGGCTGCATGAAAGGTAAGGGAGGGCCAGAGAATTTGCGATGTAATTACAGAGGAGTGAGGCAAAGGACATGGGGGAAATGGGTTGCAGAAATTCGGGCACCGAATAGGGGAAGTCGGCTCTGGTTGGGTACATTTCCATCTGCCATTGATGCTGCTCTTGCTTATGATGAAGCTGCAAGGGCCATGTATGGCAGTTTAGCTCGCCTCAATTTTCCCAACATCTCAATTCCAACCTTGCTAAAAGAAAAAGAACCATCAACAAAGGATTCCCCTGAAGTCAAGAGGTCATCAATCTCTTCTTTAGGGTCAACTTCACTTAGTCTGAGTTCTGAGTCCACAATAACATCATCAGATCACTCTGAGGATTGTGCAGGTGAAGATGTCTAG
Protein sequence
MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNEEAKLTRKVPAKGSKKGCMKGKGGPENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYGSLARLNFPNISIPTLLKEKEPSTKDSPEVKRSSISSLGSTSLSLSSESTITSSDHSEDCAGEDV
Homology
BLAST of Lag0009571 vs. NCBI nr
Match:
XP_038900306.1 (putative dehydration-responsive element-binding protein 2H [Benincasa hispida])
HSP 1 Score: 331.3 bits (848), Expect = 5.3e-87
Identity = 167/179 (93.30%), Postives = 174/179 (97.21%), Query Frame = 0
Query: 1 MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNEEAKLTRKVPAKGSKKGCMKGKGGP 60
MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCN+EAKL R+VPAKGSKKGCMKGKGGP
Sbjct: 1 MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNDEAKLARRVPAKGSKKGCMKGKGGP 60
Query: 61 ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYGSLARL 120
EN+RCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFP+AIDAALAYDEAARAMYG+LARL
Sbjct: 61 ENMRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPTAIDAALAYDEAARAMYGTLARL 120
Query: 121 NFPNISIPTLLKEKEPSTKDSPEVKRSSISSLGSTSLSLSSESTITSSDHSEDCAGEDV 180
NFPNISIPTLLKEKE STKDSPE+KRSSIS LGSTSLSLSSESTIT SDHSEDCA ED+
Sbjct: 121 NFPNISIPTLLKEKESSTKDSPEIKRSSISFLGSTSLSLSSESTIT-SDHSEDCAVEDI 178
BLAST of Lag0009571 vs. NCBI nr
Match:
XP_022140755.1 (putative dehydration-responsive element-binding protein 2H [Momordica charantia])
HSP 1 Score: 326.6 bits (836), Expect = 1.3e-85
Identity = 165/179 (92.18%), Postives = 172/179 (96.09%), Query Frame = 0
Query: 1 MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNEEAKLTRKVPAKGSKKGCMKGKGGP 60
MPKLEKLQ RRPGS SVAETLAKWKDYNDHLDSCN+E KLTR+VPAKGSKKGCMKGKGGP
Sbjct: 1 MPKLEKLQARRPGSSSVAETLAKWKDYNDHLDSCNDETKLTRRVPAKGSKKGCMKGKGGP 60
Query: 61 ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYGSLARL 120
ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAI+AALAYDEAARAMYG++ARL
Sbjct: 61 ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIEAALAYDEAARAMYGTMARL 120
Query: 121 NFPNISIPTLLKEKEPSTKDSPEVKRSSISSLGSTSLSLSSESTITSSDHSEDCAGEDV 180
NFPNISIPTLLKEKE +TKDSPE+KR SISSLGSTSLSLSSESTIT SDHSEDCA EDV
Sbjct: 121 NFPNISIPTLLKEKESATKDSPEIKRPSISSLGSTSLSLSSESTIT-SDHSEDCAVEDV 178
BLAST of Lag0009571 vs. NCBI nr
Match:
KAA0054414.1 (putative dehydration-responsive element-binding protein 2H [Cucumis melo var. makuwa] >TYJ96841.1 putative dehydration-responsive element-binding protein 2H [Cucumis melo var. makuwa])
HSP 1 Score: 315.1 bits (806), Expect = 3.9e-82
Identity = 162/180 (90.00%), Postives = 170/180 (94.44%), Query Frame = 0
Query: 1 MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNEEAKLTRKVPAKGSKKGCMKGKGGP 60
MPKL KLQTR PGSLSVAETLAKWKDYNDHLDSC +EAKL R+VPAKGSKKGCMKGKGGP
Sbjct: 1 MPKLGKLQTRLPGSLSVAETLAKWKDYNDHLDSCTDEAKLARRVPAKGSKKGCMKGKGGP 60
Query: 61 ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYGSLARL 120
EN+RCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFP+AIDAALAYDEAARAMYG+LARL
Sbjct: 61 ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGNLARL 120
Query: 121 NFPNISIPTLLKEKEPSTKDSP-EVKRSSISSLGSTSLSLSSESTITSSDHSEDCAGEDV 180
NFPN+SIPTLLKEKE STKDSP E+KRSS+S LGSTSLSLSSESTIT SDHSEDCA EDV
Sbjct: 121 NFPNVSIPTLLKEKELSTKDSPDEIKRSSLSFLGSTSLSLSSESTIT-SDHSEDCAVEDV 179
BLAST of Lag0009571 vs. NCBI nr
Match:
XP_023513197.1 (dehydration-responsive element-binding protein 2A-like [Cucurbita pepo subsp. pepo] >XP_023513198.1 dehydration-responsive element-binding protein 2A-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 313.9 bits (803), Expect = 8.8e-82
Identity = 164/182 (90.11%), Postives = 172/182 (94.51%), Query Frame = 0
Query: 1 MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNEEAKLTRKVPAKGSKKGCMKGKGGP 60
MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCN+EAKLTR+VPAKGSKKGCMKGKGGP
Sbjct: 1 MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNDEAKLTRRVPAKGSKKGCMKGKGGP 60
Query: 61 ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYGSLARL 120
EN+RCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFP+AIDAALAYDEAARAMYG+ ARL
Sbjct: 61 ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
Query: 121 NFPNISIPTLLKEKE-PSTKD--SPEVKRSSISSLGSTSLSLSSESTITSSDHSEDCAGE 180
NFPNISIPTLLKEKE P TK+ SPE+KRSSISSLGSTSLSLS ESTIT SDHSE+ A E
Sbjct: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSISSLGSTSLSLSYESTIT-SDHSEEGAAE 180
BLAST of Lag0009571 vs. NCBI nr
Match:
XP_022986391.1 (dehydration-responsive element-binding protein 2A-like [Cucurbita maxima] >XP_022986392.1 dehydration-responsive element-binding protein 2A-like [Cucurbita maxima])
HSP 1 Score: 313.5 bits (802), Expect = 1.1e-81
Identity = 163/182 (89.56%), Postives = 172/182 (94.51%), Query Frame = 0
Query: 1 MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNEEAKLTRKVPAKGSKKGCMKGKGGP 60
MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCN+EAKLTR+VPAKGSKKGCMKGKGGP
Sbjct: 1 MPKLEKLQTRRPGSLSVAETLAKWKDYNDHLDSCNDEAKLTRRVPAKGSKKGCMKGKGGP 60
Query: 61 ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYGSLARL 120
EN+RCNYRGVRQRTWGKWVAEIRAP RGSRLWLGTFP+AIDAALAYDEAARAMYG+ ARL
Sbjct: 61 ENMRCNYRGVRQRTWGKWVAEIRAPKRGSRLWLGTFPTAIDAALAYDEAARAMYGTSARL 120
Query: 121 NFPNISIPTLLKEKE-PSTKD--SPEVKRSSISSLGSTSLSLSSESTITSSDHSEDCAGE 180
NFPNISIPTLLKEKE P TK+ SPE+KRSS+SSLGSTSLSLS ESTIT SDHSE+ A E
Sbjct: 121 NFPNISIPTLLKEKESPPTKESPSPEIKRSSVSSLGSTSLSLSYESTIT-SDHSEEGAAE 180
BLAST of Lag0009571 vs. ExPASy Swiss-Prot
Match:
O82132 (Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=3702 GN=DREB2A PE=1 SV=1)
HSP 1 Score: 168.3 bits (425), Expect = 7.8e-41
Identity = 86/140 (61.43%), Postives = 106/140 (75.71%), Query Frame = 0
Query: 6 KLQTRRPGSLSVAETLAKWKDYNDHLDSCNEEAKLTRKVPAKGSKKGCMKGKGGPENLRC 65
K ++R G+ +VAE L +WK+YN+ ++ E + RKVPAKGSKKGCMKGKGGPEN RC
Sbjct: 22 KSRSRGDGT-TVAERLKRWKEYNETVE---EVSTKKRKVPAKGSKKGCMKGKGGPENSRC 81
Query: 66 NYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYGSLARLNFPN- 125
++RGVRQR WGKWVAEIR PNRGSRLWLGTFP+A +AA AYDEAA+AMYG LARLNFP
Sbjct: 82 SFRGVRQRIWGKWVAEIREPNRGSRLWLGTFPTAQEAASAYDEAAKAMYGPLARLNFPRS 141
Query: 126 --ISIPTLLKEKEPSTKDSP 143
+ + + E T ++P
Sbjct: 142 DASEVTSTSSQSEVCTVETP 157
BLAST of Lag0009571 vs. ExPASy Swiss-Prot
Match:
O82133 (Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana OX=3702 GN=DREB2B PE=2 SV=1)
HSP 1 Score: 165.2 bits (417), Expect = 6.6e-40
Identity = 83/124 (66.94%), Postives = 96/124 (77.42%), Query Frame = 0
Query: 2 PKLEKLQTRRPGSLSVAETLAKWKDYNDHLD--SCNEEAKLTRKVPAKGSKKGCMKGKGG 61
PK K + R G L+VA+ L KWK+YN+ ++ + E K RKVPAKGSKKGCMKGKGG
Sbjct: 12 PKKRKSRA-RAGGLTVADRLKKWKEYNEIVEASAVKEGEKPKRKVPAKGSKKGCMKGKGG 71
Query: 62 PENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYGSLAR 121
P+N C++RGVRQR WGKWVAEIR P G+RLWLGTFP+A AA AYDEAA AMYGSLAR
Sbjct: 72 PDNSHCSFRGVRQRIWGKWVAEIREPKIGTRLWLGTFPTAEKAASAYDEAATAMYGSLAR 131
Query: 122 LNFP 124
LNFP
Sbjct: 132 LNFP 134
BLAST of Lag0009571 vs. ExPASy Swiss-Prot
Match:
A2WL19 (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica OX=39946 GN=DREB2A PE=3 SV=2)
HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 87/152 (57.24%), Postives = 104/152 (68.42%), Query Frame = 0
Query: 3 KLEKLQTRR--PGSLSVAETLAKWKDYNDHLDSCNEEAKLTRKVPAKGSKKGCMKGKGGP 62
++ K +TRR G S+AET+ WK+ N L +E +RK PAKGSKKGCM GKGGP
Sbjct: 14 QVRKKRTRRKSDGPDSIAETIKWWKEQNQKL----QEENSSRKAPAKGSKKGCMAGKGGP 73
Query: 63 ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYGSLARL 122
EN C YRGVRQRTWGKWVAEIR PNRG RLWLG+FP+A++AA AYDEAARAMYG AR+
Sbjct: 74 ENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARV 133
Query: 123 NFPN---------ISIPTLLKEKEPSTKDSPE 144
NF + S P+L+ P+T S E
Sbjct: 134 NFADNSTDANSGCTSAPSLMMSNGPATIPSDE 161
BLAST of Lag0009571 vs. ExPASy Swiss-Prot
Match:
Q0JQF7 (Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2A PE=2 SV=1)
HSP 1 Score: 163.3 bits (412), Expect = 2.5e-39
Identity = 87/152 (57.24%), Postives = 104/152 (68.42%), Query Frame = 0
Query: 3 KLEKLQTRR--PGSLSVAETLAKWKDYNDHLDSCNEEAKLTRKVPAKGSKKGCMKGKGGP 62
++ K +TRR G S+AET+ WK+ N L +E +RK PAKGSKKGCM GKGGP
Sbjct: 14 QVRKKRTRRKSDGPDSIAETIKWWKEQNQKL----QEENSSRKAPAKGSKKGCMAGKGGP 73
Query: 63 ENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYGSLARL 122
EN C YRGVRQRTWGKWVAEIR PNRG RLWLG+FP+A++AA AYDEAARAMYG AR+
Sbjct: 74 ENSNCAYRGVRQRTWGKWVAEIREPNRGRRLWLGSFPTALEAAHAYDEAARAMYGPTARV 133
Query: 123 NFPN---------ISIPTLLKEKEPSTKDSPE 144
NF + S P+L+ P+T S E
Sbjct: 134 NFADNSTDANSGCTSAPSLMMSNGPATIPSDE 161
BLAST of Lag0009571 vs. ExPASy Swiss-Prot
Match:
Q5W6R4 (Dehydration-responsive element-binding protein 2B OS=Oryza sativa subsp. japonica OX=39947 GN=DREB2B PE=2 SV=2)
HSP 1 Score: 158.7 bits (400), Expect = 6.2e-38
Identity = 92/205 (44.88%), Postives = 123/205 (60.00%), Query Frame = 0
Query: 1 MPKLEKLQTRRP-----GSLSVAETLAKWKDYNDHLDSCNEEAKLTRKVPAKGSKKGCMK 60
MP ++ + +RP G SVAET+ +W + N+ + + K RK PAKGSKKGCMK
Sbjct: 18 MPPVQPGRKKRPRRSRDGPTSVAETIKRWAELNNQQELDPQGPKKARKAPAKGSKKGCMK 77
Query: 61 GKGGPENLRCNYRGVRQRTWGKWVAEIRAPNRGSRLWLGTFPSAIDAALAYDEAARAMYG 120
GKGGPEN RC++RGVRQRTWGKWVAEIR PN+ SRLWLGTFP+A AA AYDEAARAMYG
Sbjct: 78 GKGGPENTRCDFRGVRQRTWGKWVAEIREPNQQSRLWLGTFPTAEAAACAYDEAARAMYG 137
Query: 121 SLARLNF-----PNISIPTLL------------------KEKEPSTKDSPEVKRSSISSL 178
+AR NF P S+ L + ++ D +V +S+
Sbjct: 138 PMARTNFGQHHAPAASVQVALAAVKCALPGGGLTASKSRTSTQGASADVQDVLTGGLSAC 197
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038900306.1 | 5.3e-87 | 93.30 | putative dehydration-responsive element-binding protein 2H [Benincasa hispida] | [more] |
XP_022140755.1 | 1.3e-85 | 92.18 | putative dehydration-responsive element-binding protein 2H [Momordica charantia] | [more] |
KAA0054414.1 | 3.9e-82 | 90.00 | putative dehydration-responsive element-binding protein 2H [Cucumis melo var. ma... | [more] |
XP_023513197.1 | 8.8e-82 | 90.11 | dehydration-responsive element-binding protein 2A-like [Cucurbita pepo subsp. pe... | [more] |
XP_022986391.1 | 1.1e-81 | 89.56 | dehydration-responsive element-binding protein 2A-like [Cucurbita maxima] >XP_02... | [more] |
Match Name | E-value | Identity | Description | |
O82132 | 7.8e-41 | 61.43 | Dehydration-responsive element-binding protein 2A OS=Arabidopsis thaliana OX=370... | [more] |
O82133 | 6.6e-40 | 66.94 | Dehydration-responsive element-binding protein 2B OS=Arabidopsis thaliana OX=370... | [more] |
A2WL19 | 2.5e-39 | 57.24 | Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. indica ... | [more] |
Q0JQF7 | 2.5e-39 | 57.24 | Dehydration-responsive element-binding protein 2A OS=Oryza sativa subsp. japonic... | [more] |
Q5W6R4 | 6.2e-38 | 44.88 | Dehydration-responsive element-binding protein 2B OS=Oryza sativa subsp. japonic... | [more] |