Lag0009503 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0009503
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPentatricopeptide repeat-containing protein
Locationchr9: 39755768 .. 39756799 (+)
RNA-Seq ExpressionLag0009503
SyntenyLag0009503
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATAGGAACAACAAAGACTTGTGCGTTCTCACTCCATTTCCATCAATTTTTCCGGCAATATTCTTCTAGCCACTCAATATCTCCATCACAAACCCTTCAAGAAAATATTAAAGCTGCAGTTGAATCAAAGTCATATAAGAAACTTCCAGATTTGTTTCCTTCTTTACGGGAAGCTTGCCACAGCCCCAATCCTTTCTCGTTTCTCTCTACCTTGCCTGATAACTTCAGAACACAAGTTGTGGATGAGATTTTGCAGTCATTAATCCCTCTTAGACCTCGCTCAAGGCCCCAGTTTGTTCATGCCTCTCTGCTTTTCTACACTCTTCAAAGCCCATCACCCCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTGTCCCTGCTCCTCAGATCCACCTTCTCCTCTCTTCTGCATGGCTAAAACAACGTCACCAGTCTAAGTCTGTTGCTAGTATGTTGTTGGACATGCGGTCAATTGGATATGAACCTGACAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCATTGATGAGTTAGCAGAGGCTTTTCAAGTCTTGAAGGGTATGGGACGGGCAGGATGCGTTCCTGACTTGGAGAGTTATGGCACTTTAATCAGTGCATCAACAGCAGTTAGACGGACAGCTGAGGCTGTGGAATTGCTGAATGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAATGTTGTGGCTGCATTACGAGCAAACCGAGAGATAAGGAGAGCAGTTCAGATCATTGAGCTCTTGGAGAAGGAGAGTTACAATGTTGGATTCGAGAGCTATGAGCTTCTCGTTGACGGTTGTTTGGAGTGTCATGAGTATATTTTAGCAGGAAAGGTGATCATGGGGATGACAGAAAAAGGGTTTATACCATATATCAGGGTCAGGCAAAAGGTTGTTGAGGGACTGGCTGGTATTGGAGAGCTGGAACTTGCTTCTGCTGTGAGACGCAGATTTGCAGAGTTGAGGTCTTAA

mRNA sequence

ATGAAAATAGGAACAACAAAGACTTGTGCGTTCTCACTCCATTTCCATCAATTTTTCCGGCAATATTCTTCTAGCCACTCAATATCTCCATCACAAACCCTTCAAGAAAATATTAAAGCTGCAGTTGAATCAAAGTCATATAAGAAACTTCCAGATTTGTTTCCTTCTTTACGGGAAGCTTGCCACAGCCCCAATCCTTTCTCGTTTCTCTCTACCTTGCCTGATAACTTCAGAACACAAGTTGTGGATGAGATTTTGCAGTCATTAATCCCTCTTAGACCTCGCTCAAGGCCCCAGTTTGTTCATGCCTCTCTGCTTTTCTACACTCTTCAAAGCCCATCACCCCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTGTCCCTGCTCCTCAGATCCACCTTCTCCTCTCTTCTGCATGGCTAAAACAACGTCACCAGTCTAAGTCTGTTGCTAGTATGTTGTTGGACATGCGGTCAATTGGATATGAACCTGACAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCATTGATGAGTTAGCAGAGGCTTTTCAAGTCTTGAAGGGTATGGGACGGGCAGGATGCGTTCCTGACTTGGAGAGTTATGGCACTTTAATCAGTGCATCAACAGCAGTTAGACGGACAGCTGAGGCTGTGGAATTGCTGAATGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAATGTTGTGGCTGCATTACGAGCAAACCGAGAGATAAGGAGAGCAGTTCAGATCATTGAGCTCTTGGAGAAGGAGAGTTACAATGTTGGATTCGAGAGCTATGAGCTTCTCGTTGACGGTTGTTTGGAGTGTCATGAGTATATTTTAGCAGGAAAGGTGATCATGGGGATGACAGAAAAAGGGTTTATACCATATATCAGGGTCAGGCAAAAGGTTGTTGAGGGACTGGCTGGTATTGGAGAGCTGGAACTTGCTTCTGCTGTGAGACGCAGATTTGCAGAGTTGAGGTCTTAA

Coding sequence (CDS)

ATGAAAATAGGAACAACAAAGACTTGTGCGTTCTCACTCCATTTCCATCAATTTTTCCGGCAATATTCTTCTAGCCACTCAATATCTCCATCACAAACCCTTCAAGAAAATATTAAAGCTGCAGTTGAATCAAAGTCATATAAGAAACTTCCAGATTTGTTTCCTTCTTTACGGGAAGCTTGCCACAGCCCCAATCCTTTCTCGTTTCTCTCTACCTTGCCTGATAACTTCAGAACACAAGTTGTGGATGAGATTTTGCAGTCATTAATCCCTCTTAGACCTCGCTCAAGGCCCCAGTTTGTTCATGCCTCTCTGCTTTTCTACACTCTTCAAAGCCCATCACCCCTTCCCCTCTCTCTTCCAGTTCTCCAGCGGATTCTCCACTCTGGTTGTGTCCCTGCTCCTCAGATCCACCTTCTCCTCTCTTCTGCATGGCTAAAACAACGTCACCAGTCTAAGTCTGTTGCTAGTATGTTGTTGGACATGCGGTCAATTGGATATGAACCTGACAGCAGCATATGTAATTATCTTATATCCTCTCTTTGTGCCATTGATGAGTTAGCAGAGGCTTTTCAAGTCTTGAAGGGTATGGGACGGGCAGGATGCGTTCCTGACTTGGAGAGTTATGGCACTTTAATCAGTGCATCAACAGCAGTTAGACGGACAGCTGAGGCTGTGGAATTGCTGAATGAAATGGTTGTAAAAGTTAAATTGACACCAAGACAAGGAACGATCATCAATGTTGTGGCTGCATTACGAGCAAACCGAGAGATAAGGAGAGCAGTTCAGATCATTGAGCTCTTGGAGAAGGAGAGTTACAATGTTGGATTCGAGAGCTATGAGCTTCTCGTTGACGGTTGTTTGGAGTGTCATGAGTATATTTTAGCAGGAAAGGTGATCATGGGGATGACAGAAAAAGGGTTTATACCATATATCAGGGTCAGGCAAAAGGTTGTTGAGGGACTGGCTGGTATTGGAGAGCTGGAACTTGCTTCTGCTGTGAGACGCAGATTTGCAGAGTTGAGGTCTTAA

Protein sequence

MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS
Homology
[Close]
BLAST of Lag0009503 vs. NCBI nr
Match: XP_022971046.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022971047.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022971048.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima])

HSP 1 Score: 591.7 bits (1524), Expect = 4.2e-165
Identity = 306/343 (89.21%), Postives = 323/343 (94.17%), Query Frame = 0 

Query: 1   MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREA 60
           MK+GT +T +F LHFHQF R  SS  SI+P+QTLQE+IKAAVESKSYKKLPDLFPSL+EA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120
           C +PNPFSFLST P NFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISS 180
           PVLQRILHSGC P PQ HLLLSSAWLKQR QSKSVAS+LLDMRSIGYEPDSSICNYLISS
Sbjct: 121 PVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTP 240
           LCAIDELAEAFQVLKGMG AGCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTP
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI 300
           R+GT+INVVAALRANREIRRAV+IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Sbjct: 241 RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS 343

[Close]
BLAST of Lag0009503 vs. NCBI nr
Match: KAG6604878.1 (Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 589.7 bits (1519), Expect = 1.6e-164
Identity = 303/343 (88.34%), Postives = 324/343 (94.46%), Query Frame = 0 

Query: 1   MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREA 60
           MK+GT +T +F LHFHQF RQ SS  SI+P+Q+LQE+I+AAVESKSY++LPDLFPSL+EA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQRLPDLFPSLQEA 60

Query: 61  CHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120
           C +PNPFSFLST P NFRT VVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISS 180
           PVLQRILHSGCVP PQ HLLLSS WLKQR QSKSVAS+LL+MRSIGYEPDSSICNYLISS
Sbjct: 121 PVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTP 240
           LCAIDELAEAFQVLKGMG AGCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTP
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI 300
           RQGT+INVVAALRANREIRRAV+IIELLEKESYNVGFESYE+LV+GCLECHEYILAGKV+
Sbjct: 241 RQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECHEYILAGKVV 300

Query: 301 MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS 343

[Close]
BLAST of Lag0009503 vs. NCBI nr
Match: XP_022947166.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata] >XP_022947167.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata] >XP_022947168.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata])

HSP 1 Score: 587.8 bits (1514), Expect = 6.0e-164
Identity = 303/343 (88.34%), Postives = 323/343 (94.17%), Query Frame = 0 

Query: 1   MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREA 60
           MK+GT +T +F LHFHQF RQ SS  SI+P+Q+LQE+I+AAVESKSY+KLPDLFPSL+EA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEA 60

Query: 61  CHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120
           C +PNPFSFLST P NFRT VVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISS 180
           PVLQRILHSGCVP PQ HLLLSS WLKQR QSKSVAS+LL+MRSIGYEPDSSICNYLISS
Sbjct: 121 PVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTP 240
           LCAIDELAEAFQVLKGMG AGCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTP
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI 300
           RQGT+INVVAALRANREIRRAV+IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Sbjct: 241 RQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS 343

[Close]
BLAST of Lag0009503 vs. NCBI nr
Match: XP_023533787.1 (pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pepo] >XP_023533788.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pepo] >XP_023533789.1 pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 587.0 bits (1512), Expect = 1.0e-163
Identity = 303/343 (88.34%), Postives = 322/343 (93.88%), Query Frame = 0 

Query: 1   MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREA 60
           MK+GT +T +F LHFHQF RQ SS  SI+P+Q+LQE+I+AAVESKSY+KLPDLFPSL+EA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEA 60

Query: 61  CHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120
           C +PNPFSFLST P NFRT VVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISS 180
           PVLQRILHSGCVP PQ HLLLSS WLKQR QSKSVAS+LLDMRSIGYEPDSSICNYLISS
Sbjct: 121 PVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTP 240
           LCAIDELAEAFQVLKGMG AGCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTP
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI 300
           RQGT+INVVAALRAN EIRRAV+IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Sbjct: 241 RQGTVINVVAALRANGEIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS 343

[Close]
BLAST of Lag0009503 vs. NCBI nr
Match: XP_022140758.1 (pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia])

HSP 1 Score: 572.0 bits (1473), Expect = 3.4e-159
Identity = 301/343 (87.76%), Postives = 319/343 (93.00%), Query Frame = 0 

Query: 1   MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREA 60
           MK GTT   AF L FHQF RQYSS H+ISPSQTLQE+IKAAVESK YKKLPDLFPSLR+A
Sbjct: 1   MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDA 60

Query: 61  CHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120
           C +P+PFSFLSTLP NF TQVVDEILQSLIPLRPRSRPQ V+ASLLFYTLQSPSPLPLSL
Sbjct: 61  CQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLVYASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISS 180
            VLQRILHSGCVPAPQ HLLLSSAWLKQR QSKSVA++LLDMRSIGYEPDSSICNYLISS
Sbjct: 121 SVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTP 240
           LCAIDELAEA QVLK MG AGC+PDLESYGTLI ASTAVRRT EAVELL EMVVKVKLTP
Sbjct: 181 LCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI 300
           RQGTIINVVAALRANREIRRAV+IIELLEKES+NVGFESYELLV+GCL+C EYILAGKV+
Sbjct: 241 RQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV 300

Query: 301 MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           MGMT++GFIPYIRVRQKVVEGLA +GE+ELASAVRRRFAELRS
Sbjct: 301 MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS 342

[Close]
BLAST of Lag0009503 vs. ExPASy Swiss-Prot
Match: Q9LNC0 (Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana OX=3702 GN=At1g06270 PE=2 SV=1)

HSP 1 Score: 344.7 bits (883), Expect = 1.2e-93
Identity = 181/340 (53.24%), Postives = 245/340 (72.06%), Query Frame = 0 

Query: 7   KTCAFSLHFH---QFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHS 66
           K  A+S  F     FFR      SIS  + +++ IK AVE+K Y ++P+L  SL+E   +
Sbjct: 10  KPLAYSRSFDVCIPFFR------SISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQN 69

Query: 67  PNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVL 126
              FSFLS    + R +V+DEILQS +P+RPRS P+ V++SLL Y LQS  PLPLS  +L
Sbjct: 70  STLFSFLSAFQRHHRIRVIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAIL 129

Query: 127 QRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCA 186
           QR L SGC+P PQ HLLLS AWL++R  S+SVA ++ +M+ IGY PD+  CNYL+SSLCA
Sbjct: 130 QRTLRSGCLPNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCA 189

Query: 187 IDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQG 246
           +D+L EA +V++ M  AGC+PD+ESYG +I++    R+T + V+++ EMV K  ++PR+G
Sbjct: 190 VDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKG 249

Query: 247 TIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGM 306
            +  V AALRANREI +A+++IE +E   Y V FESYE++V+GCLE  EYILAGKV+M M
Sbjct: 250 MLTKVAAALRANREIWKAIEMIEFVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRM 309

Query: 307 TEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           T++GFIPYI+VRQKVVE L  IGE +LA  VR+R +ELRS
Sbjct: 310 TDRGFIPYIKVRQKVVERLINIGEWKLACTVRQRVSELRS 343

[Close]
BLAST of Lag0009503 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 1.7e-12
Identity = 75/322 (23.29%), Postives = 138/322 (42.86%), Query Frame = 0 

Query: 18  FFRQYSSSHSISPSQ-TLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDN 77
           F ++ S+     P Q T    +    ++   K   ++   + +  + P+ +++ S +   
Sbjct: 281 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340

Query: 78  FRTQVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVP-A 137
            +   V E ++ L  +  R   P  V  + L  TL   + +  +  + + +   G +P  
Sbjct: 341 CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 400

Query: 138 PQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVL 197
              + L+    L + H  +    +  +MRS G EPD    N LI SLC+  +L EA  +L
Sbjct: 401 CTFNSLIQGLCLTRNH--RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 460

Query: 198 KGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRA 257
           K M  +GC   + +Y TLI       +T EA E+ +EM V   ++    T   ++  L  
Sbjct: 461 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCK 520

Query: 258 NREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRV 317
           +R +  A Q+++ +  E       +Y  L+       +   A  ++  MT  G  P I  
Sbjct: 521 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 580

Query: 318 RQKVVEGLAGIGELELASAVRR 337
              ++ GL   G +E+AS + R
Sbjct: 581 YGTLISGLCKAGRVEVASKLLR 599

[Close]
BLAST of Lag0009503 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 69.3 bits (168), Expect = 9.5e-11
Identity = 58/207 (28.02%), Postives = 93/207 (44.93%), Query Frame = 0 

Query: 131 CVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEA 190
           C+P    +  L     K+    ++V  +L +M+S G  P   I N LI  LC   +L   
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVL-LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 277

Query: 191 FQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVA 250
            +++  M   GCVP+  +Y TLI       +  +AV LL E +V  K  P   T   ++ 
Sbjct: 278 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL-ERMVSSKCIPNDVTYGTLIN 337

Query: 251 ALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIP 310
            L   R    AV+++  +E+  Y++    Y +L+ G  +  +   A  +   M EKG  P
Sbjct: 338 GLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 397

Query: 311 YIRVRQKVVEGLAGIGELELASAVRRR 338
            I V   +V+GL   G+   A  +  R
Sbjct: 398 NIVVYSVLVDGLCREGKPNEAKEILNR 422

[Close]
BLAST of Lag0009503 vs. ExPASy Swiss-Prot
Match: Q0WVK7 (Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At1g05670 PE=2 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 4.0e-09
Identity = 51/164 (31.10%), Postives = 75/164 (45.73%), Query Frame = 0 

Query: 166 GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEA 225
           G EPDS     LI+  C    + +AF+V   M +AGC P++ +Y TLI           A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475

Query: 226 VELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVD 285
            ELL+EM  K+ L P   T  ++V  L  +  I  AV+++   E    N    +Y  L+D
Sbjct: 476 NELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 535

Query: 286 GCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE 330
              +  E   A +++  M  KG  P I     ++ G    G LE
Sbjct: 536 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578

[Close]
BLAST of Lag0009503 vs. ExPASy Swiss-Prot
Match: Q9FH87 (Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis thaliana OX=3702 GN=At5g65820 PE=3 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.2e-08
Identity = 45/175 (25.71%), Postives = 84/175 (48.00%), Query Frame = 0 

Query: 158 MLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISAST 217
           +L DMR  G+EP+++    LI +LC +D + EA +V   M R  C  D+ +Y  L+S   
Sbjct: 309 LLRDMRRRGFEPNANCYTVLIQALCKVDRMEEAMKVFVEMERYECEADVVTYTALVSGFC 368

Query: 218 AVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGF 277
              +  +   +L++M +K  L P + T ++++ A          ++++E + +  Y+   
Sbjct: 369 KWGKIDKCYIVLDDM-IKKGLMPSELTYMHIMVAHEKKESFEECLELMEKMRQIEYHPDI 428

Query: 278 ESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELELAS 333
             Y +++    +  E   A ++   M E G  P +     ++ GLA  G L  AS
Sbjct: 429 GIYNVVIRLACKLGEVKEAVRLWNEMEENGLSPGVDTFVIMINGLASQGCLLEAS 482

[Close]
BLAST of Lag0009503 vs. ExPASy TrEMBL
Match: A0A6J1I5P5 (pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita maxima OX=3661 GN=LOC111469834 PE=4 SV=1)

HSP 1 Score: 591.7 bits (1524), Expect = 2.0e-165
Identity = 306/343 (89.21%), Postives = 323/343 (94.17%), Query Frame = 0 

Query: 1   MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREA 60
           MK+GT +T +F LHFHQF R  SS  SI+P+QTLQE+IKAAVESKSYKKLPDLFPSL+EA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRPCSSVPSITPAQTLQESIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120
           C +PNPFSFLST P NFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISS 180
           PVLQRILHSGC P PQ HLLLSSAWLKQR QSKSVAS+LLDMRSIGYEPDSSICNYLISS
Sbjct: 121 PVLQRILHSGCFPVPQTHLLLSSAWLKQRRQSKSVASILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTP 240
           LCAIDELAEAFQVLKGMG AGCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTP
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI 300
           R+GT+INVVAALRANREIRRAV+IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Sbjct: 241 RRGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS 343

[Close]
BLAST of Lag0009503 vs. ExPASy TrEMBL
Match: A0A6J1G5M7 (pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita moschata OX=3662 GN=LOC111451115 PE=4 SV=1)

HSP 1 Score: 587.8 bits (1514), Expect = 2.9e-164
Identity = 303/343 (88.34%), Postives = 323/343 (94.17%), Query Frame = 0 

Query: 1   MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREA 60
           MK+GT +T +F LHFHQF RQ SS  SI+P+Q+LQE+I+AAVESKSY+KLPDLFPSL+EA
Sbjct: 1   MKLGTARTSSFLLHFHQFLRQCSSVPSITPAQSLQESIRAAVESKSYQKLPDLFPSLQEA 60

Query: 61  CHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120
           C +PNPFSFLST P NFRT VVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL
Sbjct: 61  CQNPNPFSFLSTFPVNFRTHVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISS 180
           PVLQRILHSGCVP PQ HLLLSS WLKQR QSKSVAS+LL+MRSIGYEPDSSICNYLISS
Sbjct: 121 PVLQRILHSGCVPVPQTHLLLSSVWLKQRRQSKSVASILLNMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTP 240
           LCAIDELAEAFQVLKGMG AGCVPDLESYGTLIS+STAVRRTAEAVELL EMVVKVKLTP
Sbjct: 181 LCAIDELAEAFQVLKGMGGAGCVPDLESYGTLISSSTAVRRTAEAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI 300
           RQGT+INVVAALRANREIRRAV+IIELLEKESYNVGFESYE+LV+GCLEC EYILAGKV+
Sbjct: 241 RQGTVINVVAALRANREIRRAVEIIELLEKESYNVGFESYEILVEGCLECREYILAGKVV 300

Query: 301 MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           MGMTEKG+IPYIRVR KVVEGLAGIGE ELASAVRRRFAELRS
Sbjct: 301 MGMTEKGYIPYIRVRHKVVEGLAGIGETELASAVRRRFAELRS 343

[Close]
BLAST of Lag0009503 vs. ExPASy TrEMBL
Match: A0A6J1CIR0 (pentatricopeptide repeat-containing protein At1g06270 OS=Momordica charantia OX=3673 GN=LOC111011343 PE=4 SV=1)

HSP 1 Score: 572.0 bits (1473), Expect = 1.7e-159
Identity = 301/343 (87.76%), Postives = 319/343 (93.00%), Query Frame = 0 

Query: 1   MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREA 60
           MK GTT   AF L FHQF RQYSS H+ISPSQTLQE+IKAAVESK YKKLPDLFPSLR+A
Sbjct: 1   MKTGTTNFSAFLL-FHQFLRQYSSIHTISPSQTLQESIKAAVESKLYKKLPDLFPSLRDA 60

Query: 61  CHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120
           C +P+PFSFLSTLP NF TQVVDEILQSLIPLRPRSRPQ V+ASLLFYTLQSPSPLPLSL
Sbjct: 61  CQNPSPFSFLSTLPVNFTTQVVDEILQSLIPLRPRSRPQLVYASLLFYTLQSPSPLPLSL 120

Query: 121 PVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISS 180
            VLQRILHSGCVPAPQ HLLLSSAWLKQR QSKSVA++LLDMRSIGYEPDSSICNYLISS
Sbjct: 121 SVLQRILHSGCVPAPQTHLLLSSAWLKQRGQSKSVANILLDMRSIGYEPDSSICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTP 240
           LCAIDELAEA QVLK MG AGC+PDLESYGTLI ASTAVRRT EAVELL EMVVKVKLTP
Sbjct: 181 LCAIDELAEASQVLKAMGGAGCIPDLESYGTLIGASTAVRRTREAVELLKEMVVKVKLTP 240

Query: 241 RQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI 300
           RQGTIINVVAALRANREIRRAV+IIELLEKES+NVGFESYELLV+GCL+C EYILAGKV+
Sbjct: 241 RQGTIINVVAALRANREIRRAVEIIELLEKESHNVGFESYELLVEGCLDCREYILAGKVV 300

Query: 301 MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           MGMT++GFIPYIRVRQKVVEGLA +GE+ELASAVRRRFAELRS
Sbjct: 301 MGMTKRGFIPYIRVRQKVVEGLADVGEVELASAVRRRFAELRS 342

[Close]
BLAST of Lag0009503 vs. ExPASy TrEMBL
Match: A0A0A0LFL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013260 PE=4 SV=1)

HSP 1 Score: 545.4 bits (1404), Expect = 1.7e-151
Identity = 280/343 (81.63%), Postives = 311/343 (90.67%), Query Frame = 0 

Query: 1   MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREA 60
           M IG TKT AF L+FH F  QYSS HSISPSQTLQ++IKAAVESKSYKKLPDLFPSL+EA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLGQYSSIHSISPSQTLQDSIKAAVESKSYKKLPDLFPSLQEA 60

Query: 61  CHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120
           CH+PN F FLST P N RTQVVDEILQSLI +RPRS+ QFVH SLLFYTLQSPSP PLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLISIRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISS 180
           PVLQRILHSGCVP+PQ H LLSSAWLKQR Q+KSVA++L+DM+SIGY+PDS+ICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTP 240
           LC+I ELAEAFQVLKGMG AGC+PDLESYGTLI A+TAVRRT +AVELL EMVVKVKL P
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCIPDLESYGTLIHAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI 300
           RQGTI NVVAALR NRE+RRAV+IIELLE++S++VGFESYELLV+GCLEC EYILAGKV 
Sbjct: 241 RQGTITNVVAALRTNREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVT 300

Query: 301 MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           MGMT++GFIPYI+VRQ+VVEGLAGIGE+ELASAVRRRF EL S
Sbjct: 301 MGMTDRGFIPYIKVRQEVVEGLAGIGEVELASAVRRRFVELGS 343

[Close]
BLAST of Lag0009503 vs. ExPASy TrEMBL
Match: A0A5D3D4C7 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold456G001070 PE=3 SV=1)

HSP 1 Score: 539.3 bits (1388), Expect = 1.2e-149
Identity = 281/343 (81.92%), Postives = 309/343 (90.09%), Query Frame = 0 

Query: 1   MKIGTTKTCAFSLHFHQFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREA 60
           M IG TKT AF L+FH F  Q SS HSISPSQTLQ++IKAAVESKSYKKLP LFPSL+EA
Sbjct: 1   MNIGRTKTSAFLLNFHHFLEQCSSIHSISPSQTLQDSIKAAVESKSYKKLPGLFPSLQEA 60

Query: 61  CHSPNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSL 120
           CH+PN F FLST P N RTQVVDEILQSLI +RPRS+ QFVH SLLFYTLQSPSP PLSL
Sbjct: 61  CHNPNLFLFLSTFPLNLRTQVVDEILQSLIFVRPRSKSQFVHGSLLFYTLQSPSPFPLSL 120

Query: 121 PVLQRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISS 180
           PVLQRILHSGCVP+PQ H LLSSAWLKQR Q+KSVA++L+DM+SIGY+PDS+ICNYLISS
Sbjct: 121 PVLQRILHSGCVPSPQTHFLLSSAWLKQRSQAKSVANILMDMQSIGYKPDSNICNYLISS 180

Query: 181 LCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTP 240
           LC+I ELAEAFQVLKGMG AGCVPDLESYGTLI A+TAVRRT +AVELL EMVVKVKL P
Sbjct: 181 LCSIGELAEAFQVLKGMGGAGCVPDLESYGTLIRAATAVRRTDKAVELLKEMVVKVKLMP 240

Query: 241 RQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVI 300
           RQ TIINVVAALRANRE+RRAV+IIELLE++S++VGFESYELLV+GCLEC EYILAGKVI
Sbjct: 241 RQRTIINVVAALRANREVRRAVEIIELLERDSHDVGFESYELLVEGCLECREYILAGKVI 300

Query: 301 MGMTEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           M MT++GFIPYI+VRQKVVEGL GIGELELASAVRRRF EL S
Sbjct: 301 MAMTDRGFIPYIKVRQKVVEGLYGIGELELASAVRRRFVELGS 343

[Close]
BLAST of Lag0009503 vs. TAIR 10
Match: AT1G06270.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 344.7 bits (883), Expect = 8.3e-95
Identity = 181/340 (53.24%), Postives = 245/340 (72.06%), Query Frame = 0 

Query: 7   KTCAFSLHFH---QFFRQYSSSHSISPSQTLQENIKAAVESKSYKKLPDLFPSLREACHS 66
           K  A+S  F     FFR      SIS  + +++ IK AVE+K Y ++P+L  SL+E   +
Sbjct: 10  KPLAYSRSFDVCIPFFR------SISSFEAVEKAIKCAVETKEYLRIPELVVSLKEPYQN 69

Query: 67  PNPFSFLSTLPDNFRTQVVDEILQSLIPLRPRSRPQFVHASLLFYTLQSPSPLPLSLPVL 126
              FSFLS    + R +V+DEILQS +P+RPRS P+ V++SLL Y LQS  PLPLS  +L
Sbjct: 70  STLFSFLSAFQRHHRIRVIDEILQSFVPVRPRSLPKIVYSSLLTYCLQSSDPLPLSFAIL 129

Query: 127 QRILHSGCVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCA 186
           QR L SGC+P PQ HLLLS AWL++R  S+SVA ++ +M+ IGY PD+  CNYL+SSLCA
Sbjct: 130 QRTLRSGCLPNPQTHLLLSDAWLERRRGSQSVADIINEMKLIGYSPDTGTCNYLVSSLCA 189

Query: 187 IDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQG 246
           +D+L EA +V++ M  AGC+PD+ESYG +I++    R+T + V+++ EMV K  ++PR+G
Sbjct: 190 VDKLDEAIKVVEEMSAAGCIPDVESYGAVINSLCLARKTTDVVKIVKEMVSKAGISPRKG 249

Query: 247 TIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGM 306
            +  V AALRANREI +A+++IE +E   Y V FESYE++V+GCLE  EYILAGKV+M M
Sbjct: 250 MLTKVAAALRANREIWKAIEMIEFVESRDYPVEFESYEVVVEGCLEVREYILAGKVVMRM 309

Query: 307 TEKGFIPYIRVRQKVVEGLAGIGELELASAVRRRFAELRS 344
           T++GFIPYI+VRQKVVE L  IGE +LA  VR+R +ELRS
Sbjct: 310 TDRGFIPYIKVRQKVVERLINIGEWKLACTVRQRVSELRS 343

[Close]
BLAST of Lag0009503 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 75.1 bits (183), Expect = 1.2e-13
Identity = 75/322 (23.29%), Postives = 138/322 (42.86%), Query Frame = 0 

Query: 18  FFRQYSSSHSISPSQ-TLQENIKAAVESKSYKKLPDLFPSLREACHSPNPFSFLSTLPDN 77
           F ++ S+     P Q T    +    ++   K   ++   + +  + P+ +++ S +   
Sbjct: 281 FIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGL 340

Query: 78  FRTQVVDEILQSLIPLRPRS-RPQFVHASLLFYTLQSPSPLPLSLPVLQRILHSGCVP-A 137
            +   V E ++ L  +  R   P  V  + L  TL   + +  +  + + +   G +P  
Sbjct: 341 CKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDV 400

Query: 138 PQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEAFQVL 197
              + L+    L + H  +    +  +MRS G EPD    N LI SLC+  +L EA  +L
Sbjct: 401 CTFNSLIQGLCLTRNH--RVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNML 460

Query: 198 KGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVAALRA 257
           K M  +GC   + +Y TLI       +T EA E+ +EM V   ++    T   ++  L  
Sbjct: 461 KQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVH-GVSRNSVTYNTLIDGLCK 520

Query: 258 NREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIPYIRV 317
           +R +  A Q+++ +  E       +Y  L+       +   A  ++  MT  G  P I  
Sbjct: 521 SRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVT 580

Query: 318 RQKVVEGLAGIGELELASAVRR 337
              ++ GL   G +E+AS + R
Sbjct: 581 YGTLISGLCKAGRVEVASKLLR 599

[Close]
BLAST of Lag0009503 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 69.3 bits (168), Expect = 6.7e-12
Identity = 58/207 (28.02%), Postives = 93/207 (44.93%), Query Frame = 0 

Query: 131 CVPAPQIHLLLSSAWLKQRHQSKSVASMLLDMRSIGYEPDSSICNYLISSLCAIDELAEA 190
           C+P    +  L     K+    ++V  +L +M+S G  P   I N LI  LC   +L   
Sbjct: 218 CLPDGYTYCTLMDGLCKEERIDEAVL-LLDEMQSEGCSPSPVIYNVLIDGLCKKGDLTRV 277

Query: 191 FQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEAVELLNEMVVKVKLTPRQGTIINVVA 250
            +++  M   GCVP+  +Y TLI       +  +AV LL E +V  K  P   T   ++ 
Sbjct: 278 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLL-ERMVSSKCIPNDVTYGTLIN 337

Query: 251 ALRANREIRRAVQIIELLEKESYNVGFESYELLVDGCLECHEYILAGKVIMGMTEKGFIP 310
            L   R    AV+++  +E+  Y++    Y +L+ G  +  +   A  +   M EKG  P
Sbjct: 338 GLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCKP 397

Query: 311 YIRVRQKVVEGLAGIGELELASAVRRR 338
            I V   +V+GL   G+   A  +  R
Sbjct: 398 NIVVYSVLVDGLCREGKPNEAKEILNR 422

[Close]
BLAST of Lag0009503 vs. TAIR 10
Match: AT1G05670.1 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.8e-10
Identity = 51/164 (31.10%), Postives = 75/164 (45.73%), Query Frame = 0 

Query: 166 GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEA 225
           G EPDS     LI+  C    + +AF+V   M +AGC P++ +Y TLI           A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475

Query: 226 VELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVD 285
            ELL+EM  K+ L P   T  ++V  L  +  I  AV+++   E    N    +Y  L+D
Sbjct: 476 NELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 535

Query: 286 GCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE 330
              +  E   A +++  M  KG  P I     ++ G    G LE
Sbjct: 536 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578

[Close]
BLAST of Lag0009503 vs. TAIR 10
Match: AT1G05670.2 (Pentatricopeptide repeat (PPR-like) superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 2.8e-10
Identity = 51/164 (31.10%), Postives = 75/164 (45.73%), Query Frame = 0 

Query: 166 GYEPDSSICNYLISSLCAIDELAEAFQVLKGMGRAGCVPDLESYGTLISASTAVRRTAEA 225
           G EPDS     LI+  C    + +AF+V   M +AGC P++ +Y TLI           A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475

Query: 226 VELLNEMVVKVKLTPRQGTIINVVAALRANREIRRAVQIIELLEKESYNVGFESYELLVD 285
            ELL+EM  K+ L P   T  ++V  L  +  I  AV+++   E    N    +Y  L+D
Sbjct: 476 NELLHEM-WKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMD 535

Query: 286 GCLECHEYILAGKVIMGMTEKGFIPYIRVRQKVVEGLAGIGELE 330
              +  E   A +++  M  KG  P I     ++ G    G LE
Sbjct: 536 AYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLE 578

The following BLAST results are available for this feature:
BLAST of Lag0009503 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022971046.14.2e-16589.21pentatricopeptide repeat-containing protein At1g06270 [Cucurbita maxima] >XP_022... [more]
KAG6604878.11.6e-16488.34Pentatricopeptide repeat-containing protein, partial [Cucurbita argyrosperma sub... [more]
XP_022947166.16.0e-16488.34pentatricopeptide repeat-containing protein At1g06270 [Cucurbita moschata] >XP_0... [more]
XP_023533787.11.0e-16388.34pentatricopeptide repeat-containing protein At1g06270 [Cucurbita pepo subsp. pep... [more]
XP_022140758.13.4e-15987.76pentatricopeptide repeat-containing protein At1g06270 [Momordica charantia][more]
BLAST of Lag0009503 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LNC01.2e-9353.24Pentatricopeptide repeat-containing protein At1g06270 OS=Arabidopsis thaliana OX... [more]
Q9LFF11.7e-1223.29Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop... [more]
O494369.5e-1128.02Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX... [more]
Q0WVK74.0e-0931.10Pentatricopeptide repeat-containing protein At1g05670, mitochondrial OS=Arabidop... [more]
Q9FH871.2e-0825.71Putative pentatricopeptide repeat-containing protein At5g65820 OS=Arabidopsis th... [more]
BLAST of Lag0009503 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1I5P52.0e-16589.21pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita maxima OX=366... [more]
A0A6J1G5M72.9e-16488.34pentatricopeptide repeat-containing protein At1g06270 OS=Cucurbita moschata OX=3... [more]
A0A6J1CIR01.7e-15987.76pentatricopeptide repeat-containing protein At1g06270 OS=Momordica charantia OX=... [more]
A0A0A0LFL31.7e-15181.63Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G013260 PE=4 SV=1[more]
A0A5D3D4C71.2e-14981.92Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946... [more]
BLAST of Lag0009503 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G06270.18.3e-9553.24Pentatricopeptide repeat (PPR) superfamily protein [more]
AT3G53700.11.2e-1323.29Pentatricopeptide repeat (PPR) superfamily protein [more]
AT4G20090.16.7e-1228.02Pentatricopeptide repeat (PPR) superfamily protein [more]
AT1G05670.12.8e-1031.10Pentatricopeptide repeat (PPR-like) superfamily protein [more]
AT1G05670.22.8e-1031.10Pentatricopeptide repeat (PPR-like) superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 251..271
NoneNo IPR availablePANTHERPTHR47933:SF18PPR CONTAINING PLANT-LIKE PROTEINcoord: 1..343
NoneNo IPR availablePANTHERPTHR47933PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEIN 1, MITOCHONDRIALcoord: 1..343
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 169..215
e-value: 3.1E-7
score: 30.5
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 173..205
e-value: 5.5E-6
score: 24.2
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 170..204
score: 10.172144
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 105..236
e-value: 1.8E-15
score: 58.9
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 237..343
e-value: 9.0E-6
score: 27.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0009503.1Lag0009503.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0005515 protein binding