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Lag0009483 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCATCGGCGCTAGGTCTGTTTTTCGGTCATTTTCCGGTTCTGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCCGGCCGTCGAGCTCTCCCTTTCGAATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGCGTTGCTTAATGCATTTGCTTCCATTAAAAGTGCGAAAAGATTTCGAATCAATAGCTCTCTGAGTTTTTTTTTTTTTTTTTTGCTCTCCCAAAAGGAGAAACATTTCAATAAGTATGGTAATGTATTTGGCTTATGAAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGCTGATGCCATTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATCTCTCGCCGCAGCTGCGGTTGGCTTCCCGAAGGTGCGTTAACTGATAACTCAATTCTCCACTTTCTTTATCTGTCATGA ATGGCTTCCATCGGCGCTAGGTCTGTTTTTCGGTCATTTTCCGGTTCTGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCCGGCCGTCGAGCTCTCCCTTTCGAATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGCTGATGCCATTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATCTCTCGCCGCAGCTGCGGTTGGCTTCCCGAAGGTGCGTTAACTGATAACTCAATTCTCCACTTTCTTTATCTGTCATGA ATGGCTTCCATCGGCGCTAGGTCTGTTTTTCGGTCATTTTCCGGTTCTGCACGCCGTGCTGCTGCTCAGATCGGTTCTCAAGCCCGGCCGTCGAGCTCTCCCTTTCGAATGGCAACTAACAAGCCCCTCTCTCATCGAACTTTCAGGTGTGCGGCTGAGATGAGCTTCTGTTTGGAGTCGCTGATGCCATTTCACTCTGCGTCGTCGTCAGCTTTGATGACTTCAATGCTCTCTATCTCTCGCCGCAGCTGCGGTTGGCTTCCCGAAGGTGCGTTAACTGATAACTCAATTCTCCACTTTCTTTATCTGTCATGA MASIGARSVFRSFSGSARRAAAQIGSQARPSSSPFRMATNKPLSHRTFRCAAEMSFCLESLMPFHSASSSALMTSMLSISRRSCGWLPEGALTDNSILHFLYLS Homology
BLAST of Lag0009483 vs. NCBI nr
Match: KAG7026975.1 (Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 172.6 bits (436), Expect = 1.8e-39 Identity = 94/105 (89.52%), Postives = 98/105 (93.33%), Query Frame = 0
BLAST of Lag0009483 vs. NCBI nr
Match: XP_022140728.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X3 [Momordica charantia]) HSP 1 Score: 161.0 bits (406), Expect = 5.5e-36 Identity = 84/90 (93.33%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Lag0009483 vs. NCBI nr
Match: XP_022140726.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X1 [Momordica charantia]) HSP 1 Score: 161.0 bits (406), Expect = 5.5e-36 Identity = 84/90 (93.33%), Postives = 87/90 (96.67%), Query Frame = 0
BLAST of Lag0009483 vs. NCBI nr
Match: XP_022140727.1 (protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial-like isoform X2 [Momordica charantia]) HSP 1 Score: 159.8 bits (403), Expect = 1.2e-35 Identity = 84/94 (89.36%), Postives = 87/94 (92.55%), Query Frame = 0
BLAST of Lag0009483 vs. NCBI nr
Match: KAG7010763.1 (Protein NUCLEAR FUSION DEFECTIVE 6, chloroplastic/mitochondrial, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 157.9 bits (398), Expect = 4.7e-35 Identity = 85/92 (92.39%), Postives = 88/92 (95.65%), Query Frame = 0
BLAST of Lag0009483 vs. ExPASy Swiss-Prot
Match: Q93ZJ3 (Protein NUCLEAR FUSION DEFECTIVE 6, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=NFD6 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.5e-09 Identity = 42/93 (45.16%), Postives = 57/93 (61.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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