Lag0009403 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTGCCGATTGTTTTGAGAATTTGTTGTTTTGGGCTGGTGGCTGTGGAATAGGAGGAATAAGAGGGTTGTTGGTGGAGGGAATTTGGGAGGGGGATGGAAATGGGTGGTTGTGGGTCTCTGAGTATTTAGACCATTTTAGGGCTTTCAATGGGAGGAGAGTGTGTGGGGGTCTGGTTCGAAGGGAAGGGATACGGTGGATGCCACCAAATTCAGAGAATTATAAGTTTAATACAGATGCAGCAGTATGCAAAGCAATGAAGTCCAGCAGTTTGGCAGCAATTATTCGAGACGCCGAAGGAAGAGTTATGCTTACATTGATGAAATTAGTCTCTTATGTGCAAGATGTGGATGCTCTTGAGGCTATGGTGATCCGTGACAGCCTGCTTGCTGCTAAGGAAGCTGGCCTCCTGAGATTGGAGGTGGAATTGGACTCAGCTCGCGTCGTGGCTTTGATTCGGTCCGAAAAGAGGGATTGTTCTGAAGTGGGCGTCCTCGTGCAAGAAATTATCCAGATCTCGAAGGGTCTGCAGTTCTGTTCCGTGAGTTGGTGCCTAAGGGAAGCAAATCTGGTGGCGCATACGGCGGCGCGTCAGGTCGTGGAGCTGGGTATTCAAGGCGTCTGGTTGGAGGAGACGCCGATGTCGTTGGAGGAGGTCTATTGCAATGAAATTTTGGACAACCAAGGAGAGAGGTTGTGTTTCTTGTTTGAGGGTTCTGTTTAG ATGAGTGCCGATTGTTTTGAGAATTTGTTGTTTTGGGCTGGTGGCTGTGGAATAGGAGGAATAAGAGGGTTGTTGGTGGAGGGAATTTGGGAGGGGGATGGAAATGGGTGGTTGTGGGTCTCTGAGTATTTAGACCATTTTAGGGCTTTCAATGGGAGGAGAGTGTGTGGGGGTCTGGTTCGAAGGGAAGGGATACGGTGGATGCCACCAAATTCAGAGAATTATAAGTTTAATACAGATGCAGCAGTATGCAAAGCAATGAAGTCCAGCAGTTTGGCAGCAATTATTCGAGACGCCGAAGGAAGAGTTATGCTTACATTGATGAAATTAGTCTCTTATGTGCAAGATGTGGATGCTCTTGAGGCTATGGTGATCCGTGACAGCCTGCTTGCTGCTAAGGAAGCTGGCCTCCTGAGATTGGAGGTGGAATTGGACTCAGCTCGCGTCGTGGCTTTGATTCGGTCCGAAAAGAGGGATTGTTCTGAAGTGGGCGTCCTCGTGCAAGAAATTATCCAGATCTCGAAGGGTCTGCAGTTCTGTTCCGTGAGTTGGTGCCTAAGGGAAGCAAATCTGGTGGCGCATACGGCGGCGCGTCAGGTCGTGGAGCTGGGTATTCAAGGCGTCTGGTTGGAGGAGACGCCGATGTCGTTGGAGGAGGTCTATTGCAATGAAATTTTGGACAACCAAGGAGAGAGGTTGTGTTTCTTGTTTGAGGGTTCTGTTTAG ATGAGTGCCGATTGTTTTGAGAATTTGTTGTTTTGGGCTGGTGGCTGTGGAATAGGAGGAATAAGAGGGTTGTTGGTGGAGGGAATTTGGGAGGGGGATGGAAATGGGTGGTTGTGGGTCTCTGAGTATTTAGACCATTTTAGGGCTTTCAATGGGAGGAGAGTGTGTGGGGGTCTGGTTCGAAGGGAAGGGATACGGTGGATGCCACCAAATTCAGAGAATTATAAGTTTAATACAGATGCAGCAGTATGCAAAGCAATGAAGTCCAGCAGTTTGGCAGCAATTATTCGAGACGCCGAAGGAAGAGTTATGCTTACATTGATGAAATTAGTCTCTTATGTGCAAGATGTGGATGCTCTTGAGGCTATGGTGATCCGTGACAGCCTGCTTGCTGCTAAGGAAGCTGGCCTCCTGAGATTGGAGGTGGAATTGGACTCAGCTCGCGTCGTGGCTTTGATTCGGTCCGAAAAGAGGGATTGTTCTGAAGTGGGCGTCCTCGTGCAAGAAATTATCCAGATCTCGAAGGGTCTGCAGTTCTGTTCCGTGAGTTGGTGCCTAAGGGAAGCAAATCTGGTGGCGCATACGGCGGCGCGTCAGGTCGTGGAGCTGGGTATTCAAGGCGTCTGGTTGGAGGAGACGCCGATGTCGTTGGAGGAGGTCTATTGCAATGAAATTTTGGACAACCAAGGAGAGAGGTTGTGTTTCTTGTTTGAGGGTTCTGTTTAG MSADCFENLLFWAGGCGIGGIRGLLVEGIWEGDGNGWLWVSEYLDHFRAFNGRRVCGGLVRREGIRWMPPNSENYKFNTDAAVCKAMKSSSLAAIIRDAEGRVMLTLMKLVSYVQDVDALEAMVIRDSLLAAKEAGLLRLEVELDSARVVALIRSEKRDCSEVGVLVQEIIQISKGLQFCSVSWCLREANLVAHTAARQVVELGIQGVWLEETPMSLEEVYCNEILDNQGERLCFLFEGSV Homology
BLAST of Lag0009403 vs. NCBI nr
Match: XP_023880084.1 (uncharacterized protein LOC111992454 [Quercus suber]) HSP 1 Score: 96.7 bits (239), Expect = 3.0e-16 Identity = 57/160 (35.62%), Postives = 88/160 (55.00%), Query Frame = 0
BLAST of Lag0009403 vs. NCBI nr
Match: XP_030963892.1 (uncharacterized protein LOC115985062 [Quercus lobata]) HSP 1 Score: 93.6 bits (231), Expect = 2.5e-15 Identity = 55/166 (33.13%), Postives = 91/166 (54.82%), Query Frame = 0
BLAST of Lag0009403 vs. NCBI nr
Match: KAF7819670.1 (uncharacterized protein G2W53_025125 [Senna tora]) HSP 1 Score: 93.2 bits (230), Expect = 3.3e-15 Identity = 55/164 (33.54%), Postives = 88/164 (53.66%), Query Frame = 0
BLAST of Lag0009403 vs. NCBI nr
Match: XP_023876296.1 (uncharacterized protein LOC111988743 [Quercus suber]) HSP 1 Score: 92.8 bits (229), Expect = 4.3e-15 Identity = 56/160 (35.00%), Postives = 86/160 (53.75%), Query Frame = 0
BLAST of Lag0009403 vs. NCBI nr
Match: XP_023885847.1 (keratin, type I cytoskeletal 13-like [Quercus suber]) HSP 1 Score: 92.8 bits (229), Expect = 4.3e-15 Identity = 55/173 (31.79%), Postives = 91/173 (52.60%), Query Frame = 0
BLAST of Lag0009403 vs. ExPASy TrEMBL
Match: A0A2N9HRK6 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS42141 PE=3 SV=1) HSP 1 Score: 97.4 bits (241), Expect = 8.4e-17 Identity = 54/182 (29.67%), Postives = 93/182 (51.10%), Query Frame = 0
BLAST of Lag0009403 vs. ExPASy TrEMBL
Match: A0A2N9FJ03 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS18678 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 2.1e-15 Identity = 50/182 (27.47%), Postives = 92/182 (50.55%), Query Frame = 0
BLAST of Lag0009403 vs. ExPASy TrEMBL
Match: A0A2N9J7Z2 (Reverse transcriptase domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS61378 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 3.5e-15 Identity = 47/161 (29.19%), Postives = 86/161 (53.42%), Query Frame = 0
BLAST of Lag0009403 vs. ExPASy TrEMBL
Match: A0A6J1C467 (uncharacterized protein LOC111007775 OS=Momordica charantia OX=3673 GN=LOC111007775 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 4.6e-15 Identity = 67/198 (33.84%), Postives = 102/198 (51.52%), Query Frame = 0
BLAST of Lag0009403 vs. ExPASy TrEMBL
Match: A0A2N9EZZ2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS12168 PE=4 SV=1) HSP 1 Score: 91.7 bits (226), Expect = 4.6e-15 Identity = 51/156 (32.69%), Postives = 82/156 (52.56%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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