Lag0009398 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGAAGTATGACCTTCAGCGATAATTGGATTGAAAGAATAATGAGTTGCATATCCACTGTGAGCTACTCCATCATGATTAATGGCTCACCCCATGACTTTTTCAAGCCTAGTAGGGGTCTAAGACAAGGAGATCCGCTTTCTCCTTATCTCTTCCTGCGTCACGCGGAAGGCTTCTCAGCGCTCCTAAAAAGGGAGGAATCTCTATCTAATATTGTTGGTTTCCAGATTAATAAATATTGCCCACTGTTGACTCACCTTTTCTTTGTAGATGACAGCTTGATATTTGTTAAATCTAAAGGAAAGGACTTGCACACTTTCAAAAGAATCCTAAAGTGGTACGAGGAAGCTTCGGGCCAAACTATCAATTTGGAGAATTCGTCCTTCATGGCTAGCAAGAATCTAAGTAAGGAAGCTAGGAATGAGTGCGAGAGAATCCTGAGGATAGAGAAAACCGATTCGCTAGGCCACTATTTGGGAATGTCGACTTAA ATGAGAAGTATGACCTTCAGCGATAATTGGATTGAAAGAATAATGAGTTGCATATCCACTGTGAGCTACTCCATCATGATTAATGGCTCACCCCATGACTTTTTCAAGCCTAGTAGGGGTCTAAGACAAGGAGATCCGCTTTCTCCTTATCTCTTCCTGCGTCACGCGGAAGGCTTCTCAGCGCTCCTAAAAAGGGAGGAATCTCTATCTAATATTGTTGGTTTCCAGATTAATAAATATTGCCCACTGTTGACTCACCTTTTCTTTGTAGATGACAGCTTGATATTTGTTAAATCTAAAGGAAAGGACTTGCACACTTTCAAAAGAATCCTAAAGTGGTACGAGGAAGCTTCGGGCCAAACTATCAATTTGGAGAATTCGTCCTTCATGGCTAGCAAGAATCTAAGTAAGGAAGCTAGGAATGAGTGCGAGAGAATCCTGAGGATAGAGAAAACCGATTCGCTAGGCCACTATTTGGGAATGTCGACTTAA ATGAGAAGTATGACCTTCAGCGATAATTGGATTGAAAGAATAATGAGTTGCATATCCACTGTGAGCTACTCCATCATGATTAATGGCTCACCCCATGACTTTTTCAAGCCTAGTAGGGGTCTAAGACAAGGAGATCCGCTTTCTCCTTATCTCTTCCTGCGTCACGCGGAAGGCTTCTCAGCGCTCCTAAAAAGGGAGGAATCTCTATCTAATATTGTTGGTTTCCAGATTAATAAATATTGCCCACTGTTGACTCACCTTTTCTTTGTAGATGACAGCTTGATATTTGTTAAATCTAAAGGAAAGGACTTGCACACTTTCAAAAGAATCCTAAAGTGGTACGAGGAAGCTTCGGGCCAAACTATCAATTTGGAGAATTCGTCCTTCATGGCTAGCAAGAATCTAAGTAAGGAAGCTAGGAATGAGTGCGAGAGAATCCTGAGGATAGAGAAAACCGATTCGCTAGGCCACTATTTGGGAATGTCGACTTAA MRSMTFSDNWIERIMSCISTVSYSIMINGSPHDFFKPSRGLRQGDPLSPYLFLRHAEGFSALLKREESLSNIVGFQINKYCPLLTHLFFVDDSLIFVKSKGKDLHTFKRILKWYEEASGQTINLENSSFMASKNLSKEARNECERILRIEKTDSLGHYLGMST Homology
BLAST of Lag0009398 vs. NCBI nr
Match: XP_022157437.1 (uncharacterized protein LOC111024135 [Momordica charantia]) HSP 1 Score: 157.9 bits (398), Expect = 7.3e-35 Identity = 76/162 (46.91%), Postives = 109/162 (67.28%), Query Frame = 0
BLAST of Lag0009398 vs. NCBI nr
Match: XP_019170410.1 (PREDICTED: uncharacterized protein LOC109165884 [Ipomoea nil]) HSP 1 Score: 156.4 bits (394), Expect = 2.1e-34 Identity = 75/161 (46.58%), Postives = 104/161 (64.60%), Query Frame = 0
BLAST of Lag0009398 vs. NCBI nr
Match: XP_027185015.1 (uncharacterized protein LOC113783152 [Coffea eugenioides]) HSP 1 Score: 155.2 bits (391), Expect = 4.8e-34 Identity = 79/163 (48.47%), Postives = 107/163 (65.64%), Query Frame = 0
BLAST of Lag0009398 vs. NCBI nr
Match: XP_024172304.2 (uncharacterized protein LOC112178381 [Rosa chinensis]) HSP 1 Score: 154.5 bits (389), Expect = 8.1e-34 Identity = 74/163 (45.40%), Postives = 99/163 (60.74%), Query Frame = 0
BLAST of Lag0009398 vs. NCBI nr
Match: XP_024156142.1 (uncharacterized protein LOC112164137 [Rosa chinensis]) HSP 1 Score: 154.1 bits (388), Expect = 1.1e-33 Identity = 74/163 (45.40%), Postives = 98/163 (60.12%), Query Frame = 0
BLAST of Lag0009398 vs. ExPASy Swiss-Prot
Match: P92555 (Uncharacterized mitochondrial protein AtMg01250 OS=Arabidopsis thaliana OX=3702 GN=AtMg01250 PE=4 SV=1) HSP 1 Score: 71.6 bits (174), Expect = 9.1e-12 Identity = 31/68 (45.59%), Postives = 42/68 (61.76%), Query Frame = 0
BLAST of Lag0009398 vs. ExPASy Swiss-Prot
Match: P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2) HSP 1 Score: 48.1 bits (113), Expect = 1.1e-04 Identity = 39/154 (25.32%), Postives = 67/154 (43.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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