Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAATCTCTCTGTTTCAATTTCCCTCATCTTCCTCCTCGCAACTCTCCCCTGGACTCAAAGCCTCAACGCAAAGAAAACCGTAATCTCCCGACGCGATTCTCAGACGCAGACCGTCACCCACATCCAATTCTACTTCCACGACACCATCAGCGGGAACACCCCCTCCGCCGTCAAGGTCGCCGATGCCCCATCCACCAGCAAGTCCCCGACGCTCTTCGGCTCCGTGTTCATGGTCGACGACCCGTTGACGGAGTCGCCGGACCCGAAATCGAAGGAGGTGGGCCGGGCACAGGGGCTCTACGGGTCGGCCGGGCAGCAGGAGCTGGGCCTCCTCATGGCGTTGACCTACGAGTTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTTTGGGGAAGAATTCGGTGATGCATACGGTTCGTGAGTTGCCGATCGTCGGAGGGACGGGGGTTTTCCGGTTGGCTCGCGGCTATGCACTGGCCAGGACTTACTGGTTCAACTCCCTTGGTGATGCGATTGTGGGTTATAATGTAACGGTTATTCACTAA
mRNA sequence
ATGGCAAATCTCTCTGTTTCAATTTCCCTCATCTTCCTCCTCGCAACTCTCCCCTGGACTCAAAGCCTCAACGCAAAGAAAACCGTAATCTCCCGACGCGATTCTCAGACGCAGACCGTCACCCACATCCAATTCTACTTCCACGACACCATCAGCGGGAACACCCCCTCCGCCGTCAAGGTCGCCGATGCCCCATCCACCAGCAAGTCCCCGACGCTCTTCGGCTCCGTGTTCATGGTCGACGACCCGTTGACGGAGTCGCCGGACCCGAAATCGAAGGAGGTGGGCCGGGCACAGGGGCTCTACGGGTCGGCCGGGCAGCAGGAGCTGGGCCTCCTCATGGCGTTGACCTACGAGTTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTTTGGGGAAGAATTCGGTGATGCATACGGTTCGTGAGTTGCCGATCGTCGGAGGGACGGGGGTTTTCCGGTTGGCTCGCGGCTATGCACTGGCCAGGACTTACTGGTTCAACTCCCTTGGTGATGCGATTGTGGGTTATAATGTAACGGTTATTCACTAA
Coding sequence (CDS)
ATGGCAAATCTCTCTGTTTCAATTTCCCTCATCTTCCTCCTCGCAACTCTCCCCTGGACTCAAAGCCTCAACGCAAAGAAAACCGTAATCTCCCGACGCGATTCTCAGACGCAGACCGTCACCCACATCCAATTCTACTTCCACGACACCATCAGCGGGAACACCCCCTCCGCCGTCAAGGTCGCCGATGCCCCATCCACCAGCAAGTCCCCGACGCTCTTCGGCTCCGTGTTCATGGTCGACGACCCGTTGACGGAGTCGCCGGACCCGAAATCGAAGGAGGTGGGCCGGGCACAGGGGCTCTACGGGTCGGCCGGGCAGCAGGAGCTGGGCCTCCTCATGGCGTTGACCTACGAGTTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTTTGGGGAAGAATTCGGTGATGCATACGGTTCGTGAGTTGCCGATCGTCGGAGGGACGGGGGTTTTCCGGTTGGCTCGCGGCTATGCACTGGCCAGGACTTACTGGTTCAACTCCCTTGGTGATGCGATTGTGGGTTATAATGTAACGGTTATTCACTAA
Protein sequence
MANLSVSISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVKVADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEFTAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNVTVIH
Homology
BLAST of Lag0009286 vs. NCBI nr
Match:
XP_038902199.1 (dirigent protein 23 [Benincasa hispida])
HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 155/184 (84.24%), Postives = 171/184 (92.93%), Query Frame = 0
Query: 1 MANLSVSISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVK 60
M NLSV+ SLI L+ATLPW QSLN KK VISR DSQ QTV++IQFYFHDT+SG TPSAVK
Sbjct: 1 MTNLSVAFSLILLIATLPWIQSLNPKKPVISRHDSQKQTVSNIQFYFHDTVSGKTPSAVK 60
Query: 61 VADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120
VA+AP+T SPTLFG+VF+ DDPLTESPDPKSKEVGRAQGLYGSAGQQELGL+MALTYEF
Sbjct: 61 VAEAPTTGNSPTLFGAVFIADDPLTESPDPKSKEVGRAQGLYGSAGQQELGLMMALTYEF 120
Query: 121 TAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNV 180
TAGEFNGSSIV++GKNSVMHTVRELP+VGGTGVFR+ARGYALARTYW N++GDAIVGYNV
Sbjct: 121 TAGEFNGSSIVVVGKNSVMHTVRELPVVGGTGVFRMARGYALARTYWVNTVGDAIVGYNV 180
Query: 181 TVIH 185
TVIH
Sbjct: 181 TVIH 184
BLAST of Lag0009286 vs. NCBI nr
Match:
XP_008457663.1 (PREDICTED: dirigent protein 23-like [Cucumis melo] >ADN34005.1 disease resistance response protein [Cucumis melo subsp. melo] >KAA0045714.1 dirigent protein 23-like [Cucumis melo var. makuwa] >TYJ99566.1 dirigent protein 23-like [Cucumis melo var. makuwa])
HSP 1 Score: 313.9 bits (803), Expect = 9.0e-82
Identity = 155/184 (84.24%), Postives = 170/184 (92.39%), Query Frame = 0
Query: 1 MANLSVSISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVK 60
MANLSVS S I L+ATLPWTQSLN KK VISR SQ QTVT+IQFYFHDT+SG TPSA+K
Sbjct: 1 MANLSVSFSFILLIATLPWTQSLNPKKPVISRHLSQKQTVTNIQFYFHDTVSGKTPSAIK 60
Query: 61 VADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120
VA+AP++SKSPTLFG++F+ DDPLTESPDPKSKEVGRAQGLYGSA QQE+GL+MALTYEF
Sbjct: 61 VAEAPTSSKSPTLFGALFIADDPLTESPDPKSKEVGRAQGLYGSAAQQEIGLMMALTYEF 120
Query: 121 TAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNV 180
TAGEF GSSIV+LGKNSVMHTVRELP+VGGTGVFR ARGYA ARTYWFN+LGDAIVGYNV
Sbjct: 121 TAGEFKGSSIVVLGKNSVMHTVRELPVVGGTGVFRFARGYAEARTYWFNTLGDAIVGYNV 180
Query: 181 TVIH 185
TVIH
Sbjct: 181 TVIH 184
BLAST of Lag0009286 vs. NCBI nr
Match:
XP_004147026.1 (dirigent protein 23 [Cucumis sativus] >AVN99019.1 hypothetical protein [Cucumis sativus])
HSP 1 Score: 312.0 bits (798), Expect = 3.4e-81
Identity = 155/184 (84.24%), Postives = 169/184 (91.85%), Query Frame = 0
Query: 1 MANLSVSISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVK 60
MANLSVS S I L+ATLPW QSLN KK VISR SQ QTVT+IQFYFHDT+SG TPSA+K
Sbjct: 1 MANLSVSFSFILLIATLPWIQSLNPKKPVISRHVSQKQTVTNIQFYFHDTVSGKTPSAIK 60
Query: 61 VADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120
VA+AP++SKSPTLFG++F+ DDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF
Sbjct: 61 VAEAPTSSKSPTLFGALFIADDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120
Query: 121 TAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNV 180
TAG+F GSS+V+LGKNSVMHTVRELPIVGGTGVFR ARGYA ARTYW NS+GDAIVGYNV
Sbjct: 121 TAGKFKGSSVVVLGKNSVMHTVRELPIVGGTGVFRFARGYAEARTYWLNSVGDAIVGYNV 180
Query: 181 TVIH 185
TVIH
Sbjct: 181 TVIH 184
BLAST of Lag0009286 vs. NCBI nr
Match:
XP_022146249.1 (dirigent protein 23 [Momordica charantia])
HSP 1 Score: 303.9 bits (777), Expect = 9.4e-79
Identity = 153/186 (82.26%), Postives = 171/186 (91.94%), Query Frame = 0
Query: 1 MANLSV-SISL-IFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSA 60
MA LS+ S SL + ++ LPWTQ+LNAKKTVISRRDSQ QTVT+IQFYFHD +SG TP+A
Sbjct: 1 MAKLSITSFSLTVLVVLALPWTQALNAKKTVISRRDSQNQTVTNIQFYFHDIVSGKTPTA 60
Query: 61 VKVADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTY 120
V+VA+AP TSKSPTLFG++F+VDDPLTE+P+PKSKEVGRAQGLYGSAGQQELGL MALTY
Sbjct: 61 VRVAEAPMTSKSPTLFGALFIVDDPLTETPNPKSKEVGRAQGLYGSAGQQELGLFMALTY 120
Query: 121 EFTAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGY 180
EFTAGE+NGSSI ILGKNSVMH VRELP+VGGTGVFRLARGYALARTYWFN+ GDAIVGY
Sbjct: 121 EFTAGEYNGSSICILGKNSVMHQVRELPVVGGTGVFRLARGYALARTYWFNAAGDAIVGY 180
Query: 181 NVTVIH 185
NVTVIH
Sbjct: 181 NVTVIH 186
BLAST of Lag0009286 vs. NCBI nr
Match:
KAE8651893.1 (hypothetical protein Csa_006446 [Cucumis sativus])
HSP 1 Score: 303.9 bits (777), Expect = 9.4e-79
Identity = 151/180 (83.89%), Postives = 165/180 (91.67%), Query Frame = 0
Query: 1 MANLSVSISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVK 60
MANLSVS S I L+ATLPW QSLN KK VISR SQ QTVT+IQFYFHDT+SG TPSA+K
Sbjct: 1 MANLSVSFSFILLIATLPWIQSLNPKKPVISRHVSQKQTVTNIQFYFHDTVSGKTPSAIK 60
Query: 61 VADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120
VA+AP++SKSPTLFG++F+ DDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF
Sbjct: 61 VAEAPTSSKSPTLFGALFIADDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120
Query: 121 TAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNV 180
TAG+F GSS+V+LGKNSVMHTVRELPIVGGTGVFR ARGYA ARTYW NS+GDAIVGYNV
Sbjct: 121 TAGKFKGSSVVVLGKNSVMHTVRELPIVGGTGVFRFARGYAEARTYWLNSVGDAIVGYNV 180
BLAST of Lag0009286 vs. ExPASy Swiss-Prot
Match:
Q84TH6 (Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1)
HSP 1 Score: 198.4 bits (503), Expect = 7.3e-50
Identity = 101/181 (55.80%), Postives = 136/181 (75.14%), Query Frame = 0
Query: 6 VSISLIFLLATLPWTQSLNAKKTVISR-RDSQTQTVTHIQFYFHDTISGNTPSAVKVADA 65
VS L+ L+ +P + + +R ++ VT++QFYFHDT+SG P+AVKVA
Sbjct: 7 VSRMLVMLIMIMPLVAQGSRLHSWANRLEETGKDKVTNLQFYFHDTLSGKNPTAVKVAQG 66
Query: 66 PSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEFTAGE 125
T KSPTLFG+VFMVDD LTE+ DPKSK VGRAQGLYGS+ ++E+GL+MA+++ F G
Sbjct: 67 TDTEKSPTLFGAVFMVDDALTETADPKSKLVGRAQGLYGSSCKEEVGLIMAMSFCFEDGP 126
Query: 126 FNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFN-SLGDAIVGYNVTVI 185
+ S+I ++GKNS M+ +RE+PIVGGTG+FR+ARGYA+ART WF+ GDAIVGYNVT++
Sbjct: 127 YKDSTISMIGKNSAMNPIREMPIVGGTGMFRMARGYAIARTNWFDPKTGDAIVGYNVTIM 186
BLAST of Lag0009286 vs. ExPASy Swiss-Prot
Match:
Q9FIG6 (Dirigent protein 1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=2 SV=1)
HSP 1 Score: 171.0 bits (432), Expect = 1.2e-41
Identity = 90/177 (50.85%), Postives = 114/177 (64.41%), Query Frame = 0
Query: 8 ISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVKVADAPST 67
+S I LLA S+ A T + + + TH+ FYFHD ISG+ P+AVKVA+A T
Sbjct: 12 LSSILLLAV-----SVTAYSTTTPYQGYKPEKFTHLHFYFHDVISGDKPTAVKVAEARPT 71
Query: 68 SKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEFTAGEFNG 127
+ FG + + DDPLTE PDP SKEVGRAQG+Y S +++ M Y FTAGEFNG
Sbjct: 72 TTLNVKFGVIMIADDPLTEGPDPSSKEVGRAQGMYASTAMKDIVFTMVFNYVFTAGEFNG 131
Query: 128 SSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNVTVIH 185
S+I + G+N + VRELPI+GGTG FR ARGYAL +TY L DA+V YNV + H
Sbjct: 132 STIAVYGRNDIFSKVRELPIIGGTGAFRFARGYALPKTYKIVGL-DAVVEYNVFIWH 182
BLAST of Lag0009286 vs. ExPASy Swiss-Prot
Match:
Q9FIG7 (Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1)
HSP 1 Score: 164.5 bits (415), Expect = 1.2e-39
Identity = 79/144 (54.86%), Postives = 99/144 (68.75%), Query Frame = 0
Query: 41 THIQFYFHDTISGNTPSAVKVADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQG 100
TH+ FYFHD ISG+ P+AVKVA+A T+ S FG + + DDPLTE PDP SKEVGRAQG
Sbjct: 43 THLHFYFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMIADDPLTEGPDPSSKEVGRAQG 102
Query: 101 LYGSAGQQELGLLMALTYEFTAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGY 160
+Y + + M FTAGEFNGS++ + G+N + VRE+PI+GGTG FR ARGY
Sbjct: 103 MYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAFRFARGY 162
Query: 161 ALARTYWFNSLGDAIVGYNVTVIH 185
A A+TY L DA+V YNV + H
Sbjct: 163 AQAKTYKVVGL-DAVVEYNVFIWH 185
BLAST of Lag0009286 vs. ExPASy Swiss-Prot
Match:
Q67YM6 (Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1)
HSP 1 Score: 163.7 bits (413), Expect = 2.0e-39
Identity = 89/184 (48.37%), Postives = 121/184 (65.76%), Query Frame = 0
Query: 4 LSVSISLIF---LLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVK 63
L + + LIF LL T+ TQS KT + ++ +TH+ FYFHD ISG+ P+ ++
Sbjct: 12 LLLLLPLIFSTVLLLTITVTQSKPYSKTT-PFQGNKPDKLTHLHFYFHDIISGDKPTTIR 71
Query: 64 VADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 123
VA+AP T+ S T+FG+V +VD P+TE P+ SKEVGRAQGLY S + G M + F
Sbjct: 72 VAEAPGTNSSATVFGAVLIVDAPVTEGPELSSKEVGRAQGLYASTDMKTFGFTMVFNFVF 131
Query: 124 TAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNV 183
T GEFNGS+ + G+N ++ RELPI+GGTG FR ARGYAL +TY ++ DA+V YNV
Sbjct: 132 TEGEFNGSTAALYGRNPILLEERELPIIGGTGDFRFARGYALPKTYKVVNI-DAVVEYNV 191
Query: 184 TVIH 185
+ H
Sbjct: 192 FIWH 193
BLAST of Lag0009286 vs. ExPASy Swiss-Prot
Match:
Q9SS03 (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)
HSP 1 Score: 162.9 bits (411), Expect = 3.4e-39
Identity = 87/186 (46.77%), Postives = 120/186 (64.52%), Query Frame = 0
Query: 11 IFLLATLPWTQSLNAKKTVISRRDSQT-----------QTVTHIQFYFHDTISGNTPSAV 70
++LL LP +L T+ + T +TH+ FYFHD +SG+ P++V
Sbjct: 4 LYLLLLLPLFLALILAATITESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKPTSV 63
Query: 71 KVADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYE 130
+VA+ P+T+ S T FG V +VDD LT P+ S+EVGRAQG+Y SA Q +LGLLMA
Sbjct: 64 QVANGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLV 123
Query: 131 FTAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFN-SLGDAIVGY 185
FT G+F+ S++ + G+N V+ VRE+PI+GGTG FR RGYALA+T FN + GDA+V Y
Sbjct: 124 FTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEY 183
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_038902199.1 | 1.8e-82 | 84.24 | dirigent protein 23 [Benincasa hispida] | [more] |
XP_008457663.1 | 9.0e-82 | 84.24 | PREDICTED: dirigent protein 23-like [Cucumis melo] >ADN34005.1 disease resistanc... | [more] |
XP_004147026.1 | 3.4e-81 | 84.24 | dirigent protein 23 [Cucumis sativus] >AVN99019.1 hypothetical protein [Cucumis ... | [more] |
XP_022146249.1 | 9.4e-79 | 82.26 | dirigent protein 23 [Momordica charantia] | [more] |
KAE8651893.1 | 9.4e-79 | 83.89 | hypothetical protein Csa_006446 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Q84TH6 | 7.3e-50 | 55.80 | Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1 | [more] |
Q9FIG6 | 1.2e-41 | 50.85 | Dirigent protein 1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=2 SV=1 | [more] |
Q9FIG7 | 1.2e-39 | 54.86 | Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1 | [more] |
Q67YM6 | 2.0e-39 | 48.37 | Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1 | [more] |
Q9SS03 | 3.4e-39 | 46.77 | Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1 | [more] |