Lag0009286 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0009286
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionDirigent protein
Locationchr9: 37734040 .. 37734594 (+)
RNA-Seq ExpressionLag0009286
SyntenyLag0009286
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAATCTCTCTGTTTCAATTTCCCTCATCTTCCTCCTCGCAACTCTCCCCTGGACTCAAAGCCTCAACGCAAAGAAAACCGTAATCTCCCGACGCGATTCTCAGACGCAGACCGTCACCCACATCCAATTCTACTTCCACGACACCATCAGCGGGAACACCCCCTCCGCCGTCAAGGTCGCCGATGCCCCATCCACCAGCAAGTCCCCGACGCTCTTCGGCTCCGTGTTCATGGTCGACGACCCGTTGACGGAGTCGCCGGACCCGAAATCGAAGGAGGTGGGCCGGGCACAGGGGCTCTACGGGTCGGCCGGGCAGCAGGAGCTGGGCCTCCTCATGGCGTTGACCTACGAGTTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTTTGGGGAAGAATTCGGTGATGCATACGGTTCGTGAGTTGCCGATCGTCGGAGGGACGGGGGTTTTCCGGTTGGCTCGCGGCTATGCACTGGCCAGGACTTACTGGTTCAACTCCCTTGGTGATGCGATTGTGGGTTATAATGTAACGGTTATTCACTAA

mRNA sequence

ATGGCAAATCTCTCTGTTTCAATTTCCCTCATCTTCCTCCTCGCAACTCTCCCCTGGACTCAAAGCCTCAACGCAAAGAAAACCGTAATCTCCCGACGCGATTCTCAGACGCAGACCGTCACCCACATCCAATTCTACTTCCACGACACCATCAGCGGGAACACCCCCTCCGCCGTCAAGGTCGCCGATGCCCCATCCACCAGCAAGTCCCCGACGCTCTTCGGCTCCGTGTTCATGGTCGACGACCCGTTGACGGAGTCGCCGGACCCGAAATCGAAGGAGGTGGGCCGGGCACAGGGGCTCTACGGGTCGGCCGGGCAGCAGGAGCTGGGCCTCCTCATGGCGTTGACCTACGAGTTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTTTGGGGAAGAATTCGGTGATGCATACGGTTCGTGAGTTGCCGATCGTCGGAGGGACGGGGGTTTTCCGGTTGGCTCGCGGCTATGCACTGGCCAGGACTTACTGGTTCAACTCCCTTGGTGATGCGATTGTGGGTTATAATGTAACGGTTATTCACTAA

Coding sequence (CDS)

ATGGCAAATCTCTCTGTTTCAATTTCCCTCATCTTCCTCCTCGCAACTCTCCCCTGGACTCAAAGCCTCAACGCAAAGAAAACCGTAATCTCCCGACGCGATTCTCAGACGCAGACCGTCACCCACATCCAATTCTACTTCCACGACACCATCAGCGGGAACACCCCCTCCGCCGTCAAGGTCGCCGATGCCCCATCCACCAGCAAGTCCCCGACGCTCTTCGGCTCCGTGTTCATGGTCGACGACCCGTTGACGGAGTCGCCGGACCCGAAATCGAAGGAGGTGGGCCGGGCACAGGGGCTCTACGGGTCGGCCGGGCAGCAGGAGCTGGGCCTCCTCATGGCGTTGACCTACGAGTTCACCGCCGGCGAGTTCAACGGCAGCTCCATTGTTATTTTGGGGAAGAATTCGGTGATGCATACGGTTCGTGAGTTGCCGATCGTCGGAGGGACGGGGGTTTTCCGGTTGGCTCGCGGCTATGCACTGGCCAGGACTTACTGGTTCAACTCCCTTGGTGATGCGATTGTGGGTTATAATGTAACGGTTATTCACTAA

Protein sequence

MANLSVSISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVKVADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEFTAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNVTVIH
Homology
BLAST of Lag0009286 vs. NCBI nr
Match: XP_038902199.1 (dirigent protein 23 [Benincasa hispida])

HSP 1 Score: 316.2 bits (809), Expect = 1.8e-82
Identity = 155/184 (84.24%), Postives = 171/184 (92.93%), Query Frame = 0

Query: 1   MANLSVSISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVK 60
           M NLSV+ SLI L+ATLPW QSLN KK VISR DSQ QTV++IQFYFHDT+SG TPSAVK
Sbjct: 1   MTNLSVAFSLILLIATLPWIQSLNPKKPVISRHDSQKQTVSNIQFYFHDTVSGKTPSAVK 60

Query: 61  VADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120
           VA+AP+T  SPTLFG+VF+ DDPLTESPDPKSKEVGRAQGLYGSAGQQELGL+MALTYEF
Sbjct: 61  VAEAPTTGNSPTLFGAVFIADDPLTESPDPKSKEVGRAQGLYGSAGQQELGLMMALTYEF 120

Query: 121 TAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNV 180
           TAGEFNGSSIV++GKNSVMHTVRELP+VGGTGVFR+ARGYALARTYW N++GDAIVGYNV
Sbjct: 121 TAGEFNGSSIVVVGKNSVMHTVRELPVVGGTGVFRMARGYALARTYWVNTVGDAIVGYNV 180

Query: 181 TVIH 185
           TVIH
Sbjct: 181 TVIH 184

BLAST of Lag0009286 vs. NCBI nr
Match: XP_008457663.1 (PREDICTED: dirigent protein 23-like [Cucumis melo] >ADN34005.1 disease resistance response protein [Cucumis melo subsp. melo] >KAA0045714.1 dirigent protein 23-like [Cucumis melo var. makuwa] >TYJ99566.1 dirigent protein 23-like [Cucumis melo var. makuwa])

HSP 1 Score: 313.9 bits (803), Expect = 9.0e-82
Identity = 155/184 (84.24%), Postives = 170/184 (92.39%), Query Frame = 0

Query: 1   MANLSVSISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVK 60
           MANLSVS S I L+ATLPWTQSLN KK VISR  SQ QTVT+IQFYFHDT+SG TPSA+K
Sbjct: 1   MANLSVSFSFILLIATLPWTQSLNPKKPVISRHLSQKQTVTNIQFYFHDTVSGKTPSAIK 60

Query: 61  VADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120
           VA+AP++SKSPTLFG++F+ DDPLTESPDPKSKEVGRAQGLYGSA QQE+GL+MALTYEF
Sbjct: 61  VAEAPTSSKSPTLFGALFIADDPLTESPDPKSKEVGRAQGLYGSAAQQEIGLMMALTYEF 120

Query: 121 TAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNV 180
           TAGEF GSSIV+LGKNSVMHTVRELP+VGGTGVFR ARGYA ARTYWFN+LGDAIVGYNV
Sbjct: 121 TAGEFKGSSIVVLGKNSVMHTVRELPVVGGTGVFRFARGYAEARTYWFNTLGDAIVGYNV 180

Query: 181 TVIH 185
           TVIH
Sbjct: 181 TVIH 184

BLAST of Lag0009286 vs. NCBI nr
Match: XP_004147026.1 (dirigent protein 23 [Cucumis sativus] >AVN99019.1 hypothetical protein [Cucumis sativus])

HSP 1 Score: 312.0 bits (798), Expect = 3.4e-81
Identity = 155/184 (84.24%), Postives = 169/184 (91.85%), Query Frame = 0

Query: 1   MANLSVSISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVK 60
           MANLSVS S I L+ATLPW QSLN KK VISR  SQ QTVT+IQFYFHDT+SG TPSA+K
Sbjct: 1   MANLSVSFSFILLIATLPWIQSLNPKKPVISRHVSQKQTVTNIQFYFHDTVSGKTPSAIK 60

Query: 61  VADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120
           VA+AP++SKSPTLFG++F+ DDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF
Sbjct: 61  VAEAPTSSKSPTLFGALFIADDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120

Query: 121 TAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNV 180
           TAG+F GSS+V+LGKNSVMHTVRELPIVGGTGVFR ARGYA ARTYW NS+GDAIVGYNV
Sbjct: 121 TAGKFKGSSVVVLGKNSVMHTVRELPIVGGTGVFRFARGYAEARTYWLNSVGDAIVGYNV 180

Query: 181 TVIH 185
           TVIH
Sbjct: 181 TVIH 184

BLAST of Lag0009286 vs. NCBI nr
Match: XP_022146249.1 (dirigent protein 23 [Momordica charantia])

HSP 1 Score: 303.9 bits (777), Expect = 9.4e-79
Identity = 153/186 (82.26%), Postives = 171/186 (91.94%), Query Frame = 0

Query: 1   MANLSV-SISL-IFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSA 60
           MA LS+ S SL + ++  LPWTQ+LNAKKTVISRRDSQ QTVT+IQFYFHD +SG TP+A
Sbjct: 1   MAKLSITSFSLTVLVVLALPWTQALNAKKTVISRRDSQNQTVTNIQFYFHDIVSGKTPTA 60

Query: 61  VKVADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTY 120
           V+VA+AP TSKSPTLFG++F+VDDPLTE+P+PKSKEVGRAQGLYGSAGQQELGL MALTY
Sbjct: 61  VRVAEAPMTSKSPTLFGALFIVDDPLTETPNPKSKEVGRAQGLYGSAGQQELGLFMALTY 120

Query: 121 EFTAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGY 180
           EFTAGE+NGSSI ILGKNSVMH VRELP+VGGTGVFRLARGYALARTYWFN+ GDAIVGY
Sbjct: 121 EFTAGEYNGSSICILGKNSVMHQVRELPVVGGTGVFRLARGYALARTYWFNAAGDAIVGY 180

Query: 181 NVTVIH 185
           NVTVIH
Sbjct: 181 NVTVIH 186

BLAST of Lag0009286 vs. NCBI nr
Match: KAE8651893.1 (hypothetical protein Csa_006446 [Cucumis sativus])

HSP 1 Score: 303.9 bits (777), Expect = 9.4e-79
Identity = 151/180 (83.89%), Postives = 165/180 (91.67%), Query Frame = 0

Query: 1   MANLSVSISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVK 60
           MANLSVS S I L+ATLPW QSLN KK VISR  SQ QTVT+IQFYFHDT+SG TPSA+K
Sbjct: 1   MANLSVSFSFILLIATLPWIQSLNPKKPVISRHVSQKQTVTNIQFYFHDTVSGKTPSAIK 60

Query: 61  VADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120
           VA+AP++SKSPTLFG++F+ DDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF
Sbjct: 61  VAEAPTSSKSPTLFGALFIADDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 120

Query: 121 TAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNV 180
           TAG+F GSS+V+LGKNSVMHTVRELPIVGGTGVFR ARGYA ARTYW NS+GDAIVGYNV
Sbjct: 121 TAGKFKGSSVVVLGKNSVMHTVRELPIVGGTGVFRFARGYAEARTYWLNSVGDAIVGYNV 180

BLAST of Lag0009286 vs. ExPASy Swiss-Prot
Match: Q84TH6 (Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1)

HSP 1 Score: 198.4 bits (503), Expect = 7.3e-50
Identity = 101/181 (55.80%), Postives = 136/181 (75.14%), Query Frame = 0

Query: 6   VSISLIFLLATLPWTQSLNAKKTVISR-RDSQTQTVTHIQFYFHDTISGNTPSAVKVADA 65
           VS  L+ L+  +P     +   +  +R  ++    VT++QFYFHDT+SG  P+AVKVA  
Sbjct: 7   VSRMLVMLIMIMPLVAQGSRLHSWANRLEETGKDKVTNLQFYFHDTLSGKNPTAVKVAQG 66

Query: 66  PSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEFTAGE 125
             T KSPTLFG+VFMVDD LTE+ DPKSK VGRAQGLYGS+ ++E+GL+MA+++ F  G 
Sbjct: 67  TDTEKSPTLFGAVFMVDDALTETADPKSKLVGRAQGLYGSSCKEEVGLIMAMSFCFEDGP 126

Query: 126 FNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFN-SLGDAIVGYNVTVI 185
           +  S+I ++GKNS M+ +RE+PIVGGTG+FR+ARGYA+ART WF+   GDAIVGYNVT++
Sbjct: 127 YKDSTISMIGKNSAMNPIREMPIVGGTGMFRMARGYAIARTNWFDPKTGDAIVGYNVTIM 186

BLAST of Lag0009286 vs. ExPASy Swiss-Prot
Match: Q9FIG6 (Dirigent protein 1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=2 SV=1)

HSP 1 Score: 171.0 bits (432), Expect = 1.2e-41
Identity = 90/177 (50.85%), Postives = 114/177 (64.41%), Query Frame = 0

Query: 8   ISLIFLLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVKVADAPST 67
           +S I LLA      S+ A  T    +  + +  TH+ FYFHD ISG+ P+AVKVA+A  T
Sbjct: 12  LSSILLLAV-----SVTAYSTTTPYQGYKPEKFTHLHFYFHDVISGDKPTAVKVAEARPT 71

Query: 68  SKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEFTAGEFNG 127
           +     FG + + DDPLTE PDP SKEVGRAQG+Y S   +++   M   Y FTAGEFNG
Sbjct: 72  TTLNVKFGVIMIADDPLTEGPDPSSKEVGRAQGMYASTAMKDIVFTMVFNYVFTAGEFNG 131

Query: 128 SSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNVTVIH 185
           S+I + G+N +   VRELPI+GGTG FR ARGYAL +TY    L DA+V YNV + H
Sbjct: 132 STIAVYGRNDIFSKVRELPIIGGTGAFRFARGYALPKTYKIVGL-DAVVEYNVFIWH 182

BLAST of Lag0009286 vs. ExPASy Swiss-Prot
Match: Q9FIG7 (Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 1.2e-39
Identity = 79/144 (54.86%), Postives = 99/144 (68.75%), Query Frame = 0

Query: 41  THIQFYFHDTISGNTPSAVKVADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQG 100
           TH+ FYFHD ISG+ P+AVKVA+A  T+ S   FG + + DDPLTE PDP SKEVGRAQG
Sbjct: 43  THLHFYFHDVISGDKPTAVKVAEARRTNSSNVNFGVIMIADDPLTEGPDPSSKEVGRAQG 102

Query: 101 LYGSAGQQELGLLMALTYEFTAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGY 160
           +Y     + +   M     FTAGEFNGS++ + G+N +   VRE+PI+GGTG FR ARGY
Sbjct: 103 MYALTAMKNISFTMVFNLAFTAGEFNGSTVAMYGRNEIFSKVREMPIIGGTGAFRFARGY 162

Query: 161 ALARTYWFNSLGDAIVGYNVTVIH 185
           A A+TY    L DA+V YNV + H
Sbjct: 163 AQAKTYKVVGL-DAVVEYNVFIWH 185

BLAST of Lag0009286 vs. ExPASy Swiss-Prot
Match: Q67YM6 (Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 2.0e-39
Identity = 89/184 (48.37%), Postives = 121/184 (65.76%), Query Frame = 0

Query: 4   LSVSISLIF---LLATLPWTQSLNAKKTVISRRDSQTQTVTHIQFYFHDTISGNTPSAVK 63
           L + + LIF   LL T+  TQS    KT    + ++   +TH+ FYFHD ISG+ P+ ++
Sbjct: 12  LLLLLPLIFSTVLLLTITVTQSKPYSKTT-PFQGNKPDKLTHLHFYFHDIISGDKPTTIR 71

Query: 64  VADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYEF 123
           VA+AP T+ S T+FG+V +VD P+TE P+  SKEVGRAQGLY S   +  G  M   + F
Sbjct: 72  VAEAPGTNSSATVFGAVLIVDAPVTEGPELSSKEVGRAQGLYASTDMKTFGFTMVFNFVF 131

Query: 124 TAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFNSLGDAIVGYNV 183
           T GEFNGS+  + G+N ++   RELPI+GGTG FR ARGYAL +TY   ++ DA+V YNV
Sbjct: 132 TEGEFNGSTAALYGRNPILLEERELPIIGGTGDFRFARGYALPKTYKVVNI-DAVVEYNV 191

Query: 184 TVIH 185
            + H
Sbjct: 192 FIWH 193

BLAST of Lag0009286 vs. ExPASy Swiss-Prot
Match: Q9SS03 (Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 3.4e-39
Identity = 87/186 (46.77%), Postives = 120/186 (64.52%), Query Frame = 0

Query: 11  IFLLATLPWTQSLNAKKTVISRRDSQT-----------QTVTHIQFYFHDTISGNTPSAV 70
           ++LL  LP   +L    T+   +   T             +TH+ FYFHD +SG+ P++V
Sbjct: 4   LYLLLLLPLFLALILAATITESKSFSTTVKAPYPGHKPDKLTHLHFYFHDIVSGDKPTSV 63

Query: 71  KVADAPSTSKSPTLFGSVFMVDDPLTESPDPKSKEVGRAQGLYGSAGQQELGLLMALTYE 130
           +VA+ P+T+ S T FG V +VDD LT  P+  S+EVGRAQG+Y SA Q +LGLLMA    
Sbjct: 64  QVANGPTTNSSATGFGLVAVVDDKLTVGPEITSEEVGRAQGMYASADQNKLGLLMAFNLV 123

Query: 131 FTAGEFNGSSIVILGKNSVMHTVRELPIVGGTGVFRLARGYALARTYWFN-SLGDAIVGY 185
           FT G+F+ S++ + G+N V+  VRE+PI+GGTG FR  RGYALA+T  FN + GDA+V Y
Sbjct: 124 FTKGKFSDSTVAMYGRNPVLSKVREMPIIGGTGAFRFGRGYALAKTLVFNITSGDAVVEY 183

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038902199.11.8e-8284.24dirigent protein 23 [Benincasa hispida][more]
XP_008457663.19.0e-8284.24PREDICTED: dirigent protein 23-like [Cucumis melo] >ADN34005.1 disease resistanc... [more]
XP_004147026.13.4e-8184.24dirigent protein 23 [Cucumis sativus] >AVN99019.1 hypothetical protein [Cucumis ... [more]
XP_022146249.19.4e-7982.26dirigent protein 23 [Momordica charantia][more]
KAE8651893.19.4e-7983.89hypothetical protein Csa_006446 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
Q84TH67.3e-5055.80Dirigent protein 23 OS=Arabidopsis thaliana OX=3702 GN=DIR23 PE=2 SV=1[more]
Q9FIG61.2e-4150.85Dirigent protein 1 OS=Arabidopsis thaliana OX=3702 GN=DIR1 PE=2 SV=1[more]
Q9FIG71.2e-3954.86Dirigent protein 2 OS=Arabidopsis thaliana OX=3702 GN=DIR2 PE=2 SV=1[more]
Q67YM62.0e-3948.37Dirigent protein 11 OS=Arabidopsis thaliana OX=3702 GN=DIR11 PE=2 SV=1[more]
Q9SS033.4e-3946.77Dirigent protein 21 OS=Arabidopsis thaliana OX=3702 GN=DIR21 PE=3 SV=1[more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR044859Allene oxide cyclase/Dirigent proteinGENE3D2.40.480.10coord: 25..177
e-value: 4.2E-21
score: 77.3
IPR004265Dirigent proteinPFAMPF03018Dirigentcoord: 40..182
e-value: 4.9E-53
score: 178.9
NoneNo IPR availablePANTHERPTHR21495:SF80DIRIGENT PROTEIN 23coord: 8..184
NoneNo IPR availablePANTHERPTHR21495NUCLEOPORIN-RELATEDcoord: 8..184

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0009286.1Lag0009286.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0048046 apoplast