Lag0009273 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0009273
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	DUF3414 domain-containing protein
Location	chr9: 37570637 .. 37572936 (+)
RNA-Seq Expression	Lag0009273
Synteny	Lag0009273

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTAGATTGTCCCATTAGGTTACAGCTTGGTTCCTCCTTGTTTCCCATCTTTCCAAGGTCTTTGTTTCTCGAGGAGTCCGTCTCGTCTTGTTGTCTTCTATACAGGGGATTATTGTTGAATTCTTGGAGCATTGGTCGGCGTTCTTGATGGATTCTTGGAGGAAAATCTGCTTCTTGGACCATTATTTGTTTCATTCCTAGCTTTTCTTGCATCATCGGGTTTGTTGATTGTTGATCCGGTTTAATTCCCAACTTCTCGCATATTATTTTCTAAGGTTTTCTTGATCTCACGCACGTCGTTTTCAACTGACAGCAAGCGTGCAATTGATTCTTGTGGTGAGAGGACGGTGGTTGACTCCGCCTCTTTTTCCAACCGAAGATGGATCTCCTCCCTCATTGGTCGAGACTCTCTTGGTCGTCATAGTGGAAGCGTCCAAAAATCGTGCGCTCTGATACCAAAAATGGTGTAGCCGATTACTAGGTGATAATTAGAAGGGTCGGTTGCAAATGTAGCAAGCTGACCCAAAATAATTGTAAATGTAGCGGCTCACAAAAAAAAATTGCAAAAATGGCCAAATCTCAAGGTCTAGAACGAACATTTACTAAGATCTGATGGTCTGATAGAATATTTTTTGATCACTGATAGATTCTATCGCTAAAAACTTTGGATCAGTGAACATAATCTAAATTGCACGTCAAACATGCCTCTATATGAATTAATCTTAACAAGAAGCTCAAGCCATCTAACCTGTTTTCAAACCATCTAATATATTAGACAATTTCTGCCGGTTGAACTATGTTCATATTGTGATTTTGACCCACTTGTATACCTTTTACATTTTTGTGTATATCGTGGACAATATTGCCGTGTTTAATGTTTTAAACTATGAAGTACAAAAATCAACTAAAAAAATAAATTCCATTAAATTCTCACCCTCACATGTTATTTAAAAGAAGACAACAGTAATTTTTTTTTAAACCATTTTTTTTAACAAGAAGACAACAGTAATAATTTTTAGAGTTAAAAATTTCAAACTGTGTTACCTAAAAGAAAAGATATTTCAAATTATGGTATACTAAAAAAAATCACATAATATATTAAAAAAAAAACCTGAACATTTTGGATTCTATCGCACTAGGTACCGCGAAAGCCGAAAAAGCACTATTAGTTCATCTCTTCTTGAGCAGCTCTGTGCCAATTGCTTAAGCCCTCTGAAAACCCAGAGGCGCGAAAAAGAGAGAATTACACAGCCATTTCTGTTTTCCTTGCTAGGGTTCAGCTTCGAAGCTCTCACTGGGACTTCTCGCATGGCCACGTCCACTTCCGTCGACTCCTCTCTCTGGTGGGATCCTTTCTGTCTGCTTCTAACCGAGCTCGAAAATGTCTCCCTCTCTTCTGCAGAGCTTCCTCCGAAACTGGTGAAATTCCTCCCTTCTATGACTTACGCGTAAGTGATTGAGTGGACATTTAACTGTGGTGGTGTCTTTTCAGATGAAAAAGTTGGATGACAACCATGCGTGGTTCTTGGATACCGTTTCACTCTTCAAGAAACCGAACGAGAAATCGAGGGTGGCTTTAGATTCTCAGGAAGTCAAGATAGGATCCCACACACTATCTATACAACCTGAACTAAAAGCTAAAGCTCTCAAGTTGAGCTACTATCTGGTCTGCCTGCACGCTTTGTATGCTGTAGTTGTTATATTCGGATTTTGAATGCTTTCCATTGCATTGTAAATGTCACAGCACTATACTCGTTTAGCTAATGAGTCATTTATTTCGTTAGTCCATATGCACGACAACATGAGAATTCTCTTGTTATATTATTTTCTCTTAACAAGATATGAACTTGTTCAAAGAATACAAATTCGGGAGTTTGTATCCTGACCAATAGGTTTTATTTATTTATTTATTTCATCAATGAAAAGTTTTGTATCTCTTTAAAAAAAAGAAAAGAAATATAAAAGACTTGAAAAAACAGAGAACATGAGAATTCTCTTATCATTTTCGCTATTCATCTAATTTATATTTTTTCCGATGGGTTTTCAATTATGAGGTATAATATGAATGAAAAGGGTGATCTTCAAAAATATTTACTGGAATGTTAGTTTCTCTTTTCCTTGATAAAATAATAATATTATCATTTTATTTATTGACGATATACTTTTATCCGTCGGTTTCAGTGTTTGGATGAGGTGCAATCATATATTTTGGCTGAAAGAACCACCGAGCACGATAATGTAGATAACAATTCCCCATTTCAGGAACTTCTTCACATGGTTAGTAGCTTGTTCCATTAA

mRNA sequence

ATGGTAGATTGTCCCATTAGGTTACAGCTTGGTTCCTCCTTGTTTCCCATCTTTCCAAGCAAGCGTGCAATTGATTCTTGTGGTGAGAGGACGGTGGTTGACTCCGCCTCTTTTTCCAACCGAAGATGGATCTCCTCCCTCATTGGTCGAGACTCTCTTGGTCGTCATAGTGGAAGCGTCCAAAAATCGTACCGCGAAAGCCGAAAAAGCACTATTAGTTCATCTCTTCTTGAGCAGCTCTGTGCCAATTGCTTAAGCCCTCTGAAAACCCAGAGGCGCGAAAAAGAGAGAATTACACAGCCATTTCTGTTTTCCTTGCTAGGGTTCAGCTTCGAAGCTCTCACTGGGACTTCTCGCATGGCCACGTCCACTTCCGTCGACTCCTCTCTCTGGTGGGATCCTTTCTGTCTGCTTCTAACCGAGCTCGAAAATGTCTCCCTCTCTTCTGCAGAGCTTCCTCCGAAACTGATGAAAAAGTTGGATGACAACCATGCGTGGTTCTTGGATACCGTTTCACTCTTCAAGAAACCGAACGAGAAATCGAGGGTGGCTTTAGATTCTCAGGAAGTCAAGATAGGATCCCACACACTATCTATACAACCTGAACTAAAAGCTAAAGCTCTCAAGTTGAGCTACTATCTGTGTTTGGATGAGGTGCAATCATATATTTTGGCTGAAAGAACCACCGAGCACGATAATGTAGATAACAATTCCCCATTTCAGGAACTTCTTCACATGGTTAGTAGCTTGTTCCATTAA

Coding sequence (CDS)

ATGGTAGATTGTCCCATTAGGTTACAGCTTGGTTCCTCCTTGTTTCCCATCTTTCCAAGCAAGCGTGCAATTGATTCTTGTGGTGAGAGGACGGTGGTTGACTCCGCCTCTTTTTCCAACCGAAGATGGATCTCCTCCCTCATTGGTCGAGACTCTCTTGGTCGTCATAGTGGAAGCGTCCAAAAATCGTACCGCGAAAGCCGAAAAAGCACTATTAGTTCATCTCTTCTTGAGCAGCTCTGTGCCAATTGCTTAAGCCCTCTGAAAACCCAGAGGCGCGAAAAAGAGAGAATTACACAGCCATTTCTGTTTTCCTTGCTAGGGTTCAGCTTCGAAGCTCTCACTGGGACTTCTCGCATGGCCACGTCCACTTCCGTCGACTCCTCTCTCTGGTGGGATCCTTTCTGTCTGCTTCTAACCGAGCTCGAAAATGTCTCCCTCTCTTCTGCAGAGCTTCCTCCGAAACTGATGAAAAAGTTGGATGACAACCATGCGTGGTTCTTGGATACCGTTTCACTCTTCAAGAAACCGAACGAGAAATCGAGGGTGGCTTTAGATTCTCAGGAAGTCAAGATAGGATCCCACACACTATCTATACAACCTGAACTAAAAGCTAAAGCTCTCAAGTTGAGCTACTATCTGTGTTTGGATGAGGTGCAATCATATATTTTGGCTGAAAGAACCACCGAGCACGATAATGTAGATAACAATTCCCCATTTCAGGAACTTCTTCACATGGTTAGTAGCTTGTTCCATTAA

Protein sequence

MVDCPIRLQLGSSLFPIFPSKRAIDSCGERTVVDSASFSNRRWISSLIGRDSLGRHSGSVQKSYRESRKSTISSSLLEQLCANCLSPLKTQRREKERITQPFLFSLLGFSFEALTGTSRMATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNEKSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSPFQELLHMVSSLFH

Homology

[Close]

BLAST of Lag0009273 vs. NCBI nr
Match: XP_022947489.1 (uncharacterized protein LOC111451342 [Cucurbita moschata])

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-55
Identity = 112/128 (87.50%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MA STSVDSSLWWDPFCLLLTELENV LSSAELPPKL+KKLDDN AWFLDTVSLFKKPNE
Sbjct: 1   MAASTSVDSSLWWDPFCLLLTELENVPLSSAELPPKLVKKLDDNRAWFLDTVSLFKKPNE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KSR ALDSQE+KIG+HTLSIQ ELK KALKLS YLCLDEVQSYILAERT EH+N+ +NSP
Sbjct: 61  KSRAALDSQEIKIGAHTLSIQSELKDKALKLSSYLCLDEVQSYILAERTAEHENLASNSP 120

Query: 240 FQELLHMV 248
           FQELLH+V
Sbjct: 121 FQELLHLV 128

[Close]

BLAST of Lag0009273 vs. NCBI nr
Match: KAG6605000.1 (Nucleoporin 188-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-55
Identity = 112/128 (87.50%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MA STSVDSSLWWDPFCLLLTELENV LSSAELPPKL+KKLDDN AWFLDTVSLFKKPNE
Sbjct: 1   MAASTSVDSSLWWDPFCLLLTELENVPLSSAELPPKLVKKLDDNRAWFLDTVSLFKKPNE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KSR ALDS E+KIG+HTLSIQ ELK KALKLS YLCLDEVQSYILAERTTEH+N+ +NSP
Sbjct: 61  KSRAALDSHEIKIGAHTLSIQSELKDKALKLSSYLCLDEVQSYILAERTTEHENLASNSP 120

Query: 240 FQELLHMV 248
           FQELLH+V
Sbjct: 121 FQELLHLV 128

[Close]

BLAST of Lag0009273 vs. NCBI nr
Match: XP_038902764.1 (uncharacterized protein LOC120089385 isoform X1 [Benincasa hispida])

HSP 1 Score: 227.3 bits (578), Expect = 1.5e-55
Identity = 115/128 (89.84%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MATSTSVDSSLWWDPF  LLTELENVSLSSAELPPKLMKK+DDNHAWF+DTVSLFKKPNE
Sbjct: 1   MATSTSVDSSLWWDPFRPLLTELENVSLSSAELPPKLMKKMDDNHAWFVDTVSLFKKPNE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KSRVALDSQEVKIGSHTLSIQPELK KALKLS YLCLDEVQSYILA RT  HDNV  NS 
Sbjct: 61  KSRVALDSQEVKIGSHTLSIQPELKTKALKLSSYLCLDEVQSYILAARTIAHDNVAENSS 120

Query: 240 FQELLHMV 248
           FQEL HMV
Sbjct: 121 FQELFHMV 128

[Close]

BLAST of Lag0009273 vs. NCBI nr
Match: TYJ99584.1 (DUF3414 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 226.9 bits (577), Expect = 2.0e-55
Identity = 113/132 (85.61%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MA+STSVDSSLWWDPF   LTELENVSLSS ELPP LMKK+DDNHAWF+ TVSLFKKPNE
Sbjct: 1   MASSTSVDSSLWWDPFHPFLTELENVSLSSTELPPTLMKKMDDNHAWFVGTVSLFKKPNE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KSRVALDSQEVKIG+HTLSIQPELKAKALKLS YLCLDEVQSYILA RT EH+NV  NSP
Sbjct: 61  KSRVALDSQEVKIGAHTLSIQPELKAKALKLSSYLCLDEVQSYILASRTIEHENVHENSP 120

Query: 240 FQELLHMVSSLF 252
           F+ELLHMV S F
Sbjct: 121 FEELLHMVGSFF 132

[Close]

BLAST of Lag0009273 vs. NCBI nr
Match: XP_023533343.1 (uncharacterized protein LOC111795266 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 226.5 bits (576), Expect = 2.6e-55
Identity = 112/128 (87.50%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MA STSVDSSLWWDPFCLLLTELENV LSSAELPPKL+KKLDDN AWFLDTVSLFKKPNE
Sbjct: 1   MAASTSVDSSLWWDPFCLLLTELENVPLSSAELPPKLVKKLDDNRAWFLDTVSLFKKPNE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KSR ALDSQ +KIG+HTLSIQ ELK KALKLS YLCLDEVQSYILAERTTEH+N+ +NSP
Sbjct: 61  KSRAALDSQGIKIGAHTLSIQSELKDKALKLSSYLCLDEVQSYILAERTTEHENLASNSP 120

Query: 240 FQELLHMV 248
           FQELLH+V
Sbjct: 121 FQELLHLV 128

[Close]

BLAST of Lag0009273 vs. ExPASy TrEMBL
Match: A0A6J1G6Y8 (uncharacterized protein LOC111451342 OS=Cucurbita moschata OX=3662 GN=LOC111451342 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 7.4e-56
Identity = 112/128 (87.50%), Postives = 119/128 (92.97%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MA STSVDSSLWWDPFCLLLTELENV LSSAELPPKL+KKLDDN AWFLDTVSLFKKPNE
Sbjct: 1   MAASTSVDSSLWWDPFCLLLTELENVPLSSAELPPKLVKKLDDNRAWFLDTVSLFKKPNE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KSR ALDSQE+KIG+HTLSIQ ELK KALKLS YLCLDEVQSYILAERT EH+N+ +NSP
Sbjct: 61  KSRAALDSQEIKIGAHTLSIQSELKDKALKLSSYLCLDEVQSYILAERTAEHENLASNSP 120

Query: 240 FQELLHMV 248
           FQELLH+V
Sbjct: 121 FQELLHLV 128

[Close]

BLAST of Lag0009273 vs. ExPASy TrEMBL
Match: A0A5D3BKP2 (DUF3414 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G001560 PE=4 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 9.6e-56
Identity = 113/132 (85.61%), Postives = 119/132 (90.15%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MA+STSVDSSLWWDPF   LTELENVSLSS ELPP LMKK+DDNHAWF+ TVSLFKKPNE
Sbjct: 1   MASSTSVDSSLWWDPFHPFLTELENVSLSSTELPPTLMKKMDDNHAWFVGTVSLFKKPNE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KSRVALDSQEVKIG+HTLSIQPELKAKALKLS YLCLDEVQSYILA RT EH+NV  NSP
Sbjct: 61  KSRVALDSQEVKIGAHTLSIQPELKAKALKLSSYLCLDEVQSYILASRTIEHENVHENSP 120

Query: 240 FQELLHMVSSLF 252
           F+ELLHMV S F
Sbjct: 121 FEELLHMVGSFF 132

[Close]

BLAST of Lag0009273 vs. ExPASy TrEMBL
Match: A0A6J1I6R8 (uncharacterized protein LOC111469682 OS=Cucurbita maxima OX=3661 GN=LOC111469682 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 3.7e-55
Identity = 112/128 (87.50%), Postives = 118/128 (92.19%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MA STSVDSSLWWDPFCLLLTELENV LSSAELPPKL+KKLDDN AWFLDTVSLFKKPNE
Sbjct: 1   MAASTSVDSSLWWDPFCLLLTELENVPLSSAELPPKLVKKLDDNRAWFLDTVSLFKKPNE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KSR ALDSQE+KIGSH LSIQ ELK KALKLS YLCLDEVQSYILAERTTEH+N+ +NS 
Sbjct: 61  KSRAALDSQEIKIGSHILSIQSELKDKALKLSSYLCLDEVQSYILAERTTEHENLASNST 120

Query: 240 FQELLHMV 248
           FQELLH+V
Sbjct: 121 FQELLHLV 128

[Close]

BLAST of Lag0009273 vs. ExPASy TrEMBL
Match: A0A5A7TWR3 (Nucleoporin NUP188-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G002170 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 111/128 (86.72%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MA+STSVDSSLWWDPF   LTELENVSLSS ELPP LMKK+DDNHAWF+ TVSLFKKPNE
Sbjct: 1   MASSTSVDSSLWWDPFHPFLTELENVSLSSTELPPTLMKKMDDNHAWFVGTVSLFKKPNE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KSRVALDSQEVKIG+HTLSIQPELKAKALKLS YLCLDEVQSYILA RT EH+NV  NSP
Sbjct: 61  KSRVALDSQEVKIGAHTLSIQPELKAKALKLSSYLCLDEVQSYILASRTIEHENVHENSP 120

Query: 240 FQELLHMV 248
           F+ELLHMV
Sbjct: 121 FEELLHMV 128

[Close]

BLAST of Lag0009273 vs. ExPASy TrEMBL
Match: A0A1S3C7B7 (uncharacterized protein LOC103497512 OS=Cucumis melo OX=3656 GN=LOC103497512 PE=4 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 1.4e-54
Identity = 111/128 (86.72%), Postives = 117/128 (91.41%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MA+STSVDSSLWWDPF   LTELENVSLSS ELPP LMKK+DDNHAWF+ TVSLFKKPNE
Sbjct: 1   MASSTSVDSSLWWDPFHPFLTELENVSLSSTELPPTLMKKMDDNHAWFVGTVSLFKKPNE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KSRVALDSQEVKIG+HTLSIQPELKAKALKLS YLCLDEVQSYILA RT EH+NV  NSP
Sbjct: 61  KSRVALDSQEVKIGAHTLSIQPELKAKALKLSSYLCLDEVQSYILASRTIEHENVHENSP 120

Query: 240 FQELLHMV 248
           F+ELLHMV
Sbjct: 121 FEELLHMV 128

[Close]

BLAST of Lag0009273 vs. TAIR 10
Match: AT4G38760.1 (Protein of unknown function (DUF3414) )

HSP 1 Score: 137.9 bits (346), Expect = 1.1e-32
Identity = 72/124 (58.06%), Postives = 92/124 (74.19%), Query Frame = 0


Query: 120 MATSTSVDSSLWWDPFCLLLTELENVSLSSAELPPKLMKKLDDNHAWFLDTVSLFKKPNE 179
           MA   SVDSSLWWDPF  LLT+LEN SLS  +LP  + KKL++NHAWF+ T+S+FK P+E
Sbjct: 1   MANPNSVDSSLWWDPFDSLLTDLENASLSD-DLPQPIAKKLEENHAWFVGTLSMFKPPSE 60

Query: 180 KSRVALDSQEVKIGSHTLSIQPELKAKALKLSYYLCLDEVQSYILAERTTEHDNVDNNSP 239
           KS+ AL+S  VKI  H L I+P+LK KAL++S +L LDE+QSYIL ER+ E +    +S 
Sbjct: 61  KSKEALNSDLVKIKEHQLVIKPQLKDKALRISSHLNLDEIQSYILVERSMEQEYGTTDSV 120

Query: 240 FQEL 244
            QEL
Sbjct: 121 AQEL 123

The following BLAST results are available for this feature:

BLAST of Lag0009273 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022947489.1	1.5e-55	87.50	uncharacterized protein LOC111451342 [Cucurbita moschata]	[more]
KAG6605000.1	1.5e-55	87.50	Nucleoporin 188-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]
XP_038902764.1	1.5e-55	89.84	uncharacterized protein LOC120089385 isoform X1 [Benincasa hispida]	[more]
TYJ99584.1	2.0e-55	85.61	DUF3414 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_023533343.1	2.6e-55	87.50	uncharacterized protein LOC111795266 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Lag0009273 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0009273 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1G6Y8	7.4e-56	87.50	uncharacterized protein LOC111451342 OS=Cucurbita moschata OX=3662 GN=LOC1114513...	[more]
A0A5D3BKP2	9.6e-56	85.61	DUF3414 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A6J1I6R8	3.7e-55	87.50	uncharacterized protein LOC111469682 OS=Cucurbita maxima OX=3661 GN=LOC111469682...	[more]
A0A5A7TWR3	1.4e-54	86.72	Nucleoporin NUP188-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_...	[more]
A0A1S3C7B7	1.4e-54	86.72	uncharacterized protein LOC103497512 OS=Cucumis melo OX=3656 GN=LOC103497512 PE=...	[more]

BLAST of Lag0009273 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38760.1	1.1e-32	58.06	Protein of unknown function (DUF3414)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR044840	Nucleoporin Nup188	PANTHER	PTHR31431	NUCLEOPORIN NUP188 HOMOLOG	coord: 120..248

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0009273.1	Lag0009273.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006913	nucleocytoplasmic transport
biological_process	GO:0015031	protein transport
cellular_component	GO:0005643	nuclear pore
molecular_function	GO:0017056	structural constituent of nuclear pore