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Lag0009246 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCATGAGCATCTCGAGATGTCTGGATATCTTACATTACTGCAAAACAAACGAGGTAATCCAAATGCTTATTTTATGAGAATCTTGGATTACCGCAAAACAAACGGCCCTAAAACTCACTACTAATTTCAACAAAATTTAAGTTTTGCTAAAATTGAGTAGATTAGTGCACAACATGATTGAATAAATCTTTCAATGATGCAAATTTCAACAATAATCCTAATGGTTTTTTCTTAATTCATTAATCTTGTACTAAACATTTTTTTTATTAATTACATGCATATAAGAAAATTTTCATCCACGATGTTTTAGATGAAAGTCTATGATAAAATTTAGGGAAAAATACACTTTTGGTCCCTGAAGTTTGGGTTAAGTGACACTTTGGTCCTCGAGTTTTCAAACTCAACAAAAATACCCCGAGGTTTGAGATAAGGAGCAATTTGGTCCCTGCCGTCAATTTTTCTGTTAAACCCTAACGGTAAGCTGACGTGGCACTATTATTTTAATTAAAAAAATTAATTTTTAATTTTTTTAAATAAAAAATATAAAAATATTAAATATATTATTATTTTATTATTATTTTTAAAATTCTCTCTTTATCTTCTCCATCTTCTTTCTTCTCCACCTTCTTTCTCCCTCCATCTTCTTCCTTCCCCCTCCCATCTTCTTCAGCTCCGGTGGCCGGCCGCCGCCGGCTGCCGGCGAACGGCGGCGGTCGCTGGAATTTTTCTTTTTCCTTCTTTCTTCTTCTTCTCTTCTTCTCTTCTTCCCTTCTTCTTCTTTCTTTTCCTTTTTTCTGTTTTTTTTTTTAAAGAAGGGAGTTTCGGGAGGAGGAGCTCTTCCCCGAAACTCCCTTCTTTTTTTTTTTTTTAAAAAAAAAACAGAAGAAAGGAAGAGAAAGAAGAAGAAGAGAAGAAGAGAAGAAGAAGAAAGAAGGAAAAAAATAAAAAATTTCGGAGACCGCCGCCGCTGCGGTCGGCCACCGGAGCTGAAGAAGATGGGAGGGGGAAGGAAGAAGATGGAGGGAGAAAGAAGGTGGAGAAGAAAGAAGATGGAGAAGATAGAGAGAGAATTTTAAAAATAATAATAAAATAATAATATATTTAATATTTTTATATTTTTTATTTAAAAAAATTAAAAATTAATTTTTTTAATTAAAATAATAGTGTCACGTCAGCTTACCGTTAGGCTTTAACAGAAAAATTGACGGCAGCGACCAAATTGCTCCTTATCTCAAACCTCGGGGTATTTTTGTTGAGTTTGAAAACTCGGGGACCAAAGTGTCACTTAACCCAAACCTCAGGGACCAAAAGTGTATTTTTCCCTAAAATTTACAACACGTATTCACGTTGAATGTGATTGCAACACTTATGGAAGTTTAAATTTCAATTTGATAAAACTGAAAGTTTAAGGTAAAAGTTGATACAAGTGGTCAAATACGGACTAAAATTTGATTTTTTTTTTTCATAATTATTTTTGGTTAAATATACTAAATAGTTCCGAGTCTTTTAATCCATTATCAATTTGGTCTTCAATCTTTAAAAACTCTCAAGTTTACCTTTACTAGTTACTAATATATTCAAAATTCTTCCCTATGTCATTTTATAAAATAAAATAGTTGAAATTTGTTAAAGAAAAGTTGATATGCCATTAAATTATTGTTTTATTAACATATTTAGACAAGTGAATATACTACTCAAATATTATTAGCATATATTAATAATTTTCTTATATGACATATTTTTTAAACCTGCGAGAGAGATGTCTAACAAGTTAACATTTTAAATAACATACATGAAAGTAACTAAACTATCATTGTATGATGACAAGTAATCAAATTATAAAGATCGGATTGAAAAGTCCACCCAAGACATAATTCAACTTGTTATTTGTTAAGATCTATTCACACTCAAACAAGAAGTTAGAAATTTGAATCTCACTCCAAAAAGTATTTGGCTCAAGGAGTTGTGAAGTCAGAGGTTAGGTAGAGTTAATAACTCCGCTCAACTCCTTGTTTGGCAGAGTCGTCCTTTAGCATGTGTGAGTTGTGACTCATCACAATACCCCAAACTTCAGGCTCCAAATTGAAAAAGTTGCTTACAAAAAAAAATCTTTTGACAGAAGGTAGACAAAAAATTTTAAATTCTTACGTCTTCATTTCTCTTTCATCGTCAAGAAAAACTCTTCCAAATCATTCTTTTGTCAATTCTCATGCTAAGTTAGACATAAAACTTTTTAATCTAGTTTGAAGGATGACACTTTTTAAATAAAATATCACATTATATAGTTGTTTGGTGACATTTTTTTTGTTTCATATATTTTGTTTTGTTTTCTTTTTTGTAAAAACAATTGTATAATAAAATGAATTTTGATATTTTCAAATCTTGTCGTTATAAAATATTTTAGGGTCTCATTCTGAAAAGAATCACAGGGCCCATCTCATTTGGTACGGGCCGGTTGTTTATCTAGAAAATTTATAGTACATACTCCCTCCATTCAACATTTGACGGATCATGTAATGATCACTTAATAATATAATATTTTATTCCATGAGTACTACATCATTTTTAAATGTTTCTTTCCTGGCAACCAATGAATCGAGGTAGTGTGGAAAAATTGTTCATTTTTAATCTAGCCAGACGTGAGTCCATCAACTTATTAACTAATTACAACACTCTATTGTAGATCCCACAAACTTATTAACTCTTATCCAAACACTTTAGTAGGGGTTCCATAAACTTATGAAGTCCTACTCTAACTCCTAACACAAAACAATTCTCATCAAACATTTTTCACAAAATTGACTGAGATGTAAGAATTGGGCTAAAAAAAAAATCTGGAGTTAGAATGATGCTCAAATCCAAAACACTCTCTTCTCTGCAATTTCACAGGCCTTGCTAATCCAAAACCTCAGAAAAAGCTCATAGCTCGCAAATCCGAATCCATTTCAGCCCAACAAAGTAGAGATTTCGATCACAAATATCAAAATTATTCATCTGGGGAATCAAATTTCAGGATGCCGCATCTTCTGCAGCAAATTCATCCTCAACCCCATCATTCGCCACTCAAACTTTCGTCTTCCCTCGCATCTTCACGATTTCCTTCCCAATTGCAAGCTTCACCGCCATGGTTTTGCTCCCAGAGTTCCGTCGCCCTTGTTCGTCAACGTCCGACAATGAGGGGCGCAACCATTCGGTGTATGGCCAATTCACGGAGGGTTAAAATGGTGGCGAAGCAGATTCAGAGGGAGCTTTCCGACATGCTTCTTACTGATAAGGTGTTGCAGTACGCCATTCTTCCTGAGGCCTCTTTGGGAGCGGATAAGTACCTCTCGTCTCTCACCACCATCACCGATGTTGAAGTCTCCGCCGACTTGCAGGTATTTTGACAGATTGTTCAAATTGAAGAGCTGGGATGGGTGTTTCTTTTTGCTGTTCTTGAGATATTTTGTAGTGGGTAGCAGAATTATGTTTTGTTTTTCATTCGTTTTCTGGATACCCCCCAAAACTGTAGTTCGTTATGGAACTGGGAAAGAATTGAAGCTAAGGGATGAAGCCTGAGGCCTAAATGGTGATTTTTTGCTTGAATATGATAGTAAATATGAATATCGTATGAGATTTACACGATTTACACGATTTACACTACATTCAAGCGGTGCATTTGTTGAAGAGAAGGGATTGTATCGAATTTTGACTTCTTAAATTGCTACACAACTCAATTGCTGGTTGCATCTTGAACTGTGGATATAGTGTAGTTTAGCCTCTGGGAAACCCGGAAACGATTAGGAGGCTTCAGAAGCCCATTAGAAATGTTTGGTTGAAACGTTTATGACATTAGTTCTTAACTCGAGGAACTAGACTTTTTGAGAAGGAGAACATATTGAAGAGAATTCTTGTGGAATGCTTGAAAGTCACTTTAGCCTTGATAAGCAAGTGCTGGGACTACAATGCTTTTGGAAGAATTTTCCTGATAAGTCATGCTTATATCGACCACTGGGATAACCATTGCTTCTCAAGCCTGGATTGATTCTACTATAGAGACCAAGGAAAGAAGTTTGTCGATATCTTTTTTCATACAGCAACCAATCCACCTCACTTCTGCTTTTGAACTTGCAGTGGCAGATGTGTAAGTGGTGGTTGTGTTTTTTTTTTATCGATGTTTGAACAGATTTAACATTGCAAGCTGCCTATATCTTAGGATTTACCTTTTAGTCTTATTATTATTGAAAGTTTTTCTTTAAACGAGGTTTAGATATGGATATGTCACACCTTTGAGTGTCAGAATGAAAAAATGTTAATGTGATAAAAGCCATGACAGTGTGATACAAACCCTTTGGTCTTCTCTGAGCCTTGACTGAGCTGGTTAGTGGTTTGCTCTTTGCTCAGCAGTAGTAAGCCTCTTGGCTTTCAATCTTTCCCTGAAATCAGTTTTCATCTATCCTTTTCTTGTTTGTTGTCAAAGCCAAAAGCAACGTAAATATTGTTTCTTGAAAGAGTGGACATATACCTTTTTATTGTCATGAAAATTTCAGTACTACAAAGGTCAAACCTTATTTCGCCATTTAACGCTTCACCTTCCTTGAGTTTACAAGTCAGTTTGTTATTTCTTATTTGAATTGTACAGTTTAGGTACCATGTGGATGTGATTGTGTCAATATCAGCTTAAACACACCAGGAAAAGAATCAAAGAGCTTTTTCTTTTCATTTTGGTTTATATGTTGGCAACCTTGACCGATGCTTCAGCTAATAAGTAATTGTTGTATGCTATATATGAATACGGACACACAGGTGGTTAAAGTATATGTATCTGTCTTTGGTGATGAAAGAGGAAAGGATGTTGCTATGGCTGGGTTGAAGTCTAAAGCTAAGTATGTTCGAAGTGTATTGGGAAAACGTATGAAGCTTCGACTAACTCCTGAGATACGTTTTATAGAGGATGAATCTTTTGAGAGAGGAAGCAGGGTAAGTAACAATTTATCTTCTTGCTTATATATATTTTCTTGCAATGGCTGGAGACCAGTTCAGTTACTTTTAAGAATTCCTTCCACAAGATGTTTTTCATCTCATATTCTTCCCTGTTTCTCAATGCATGTGCTTATGTCTTAGGAACTTCGGGTTTATTGCATCTTTCCTATTGAAATATCTCTGGGAAGTTTTAGAAATATCATTGTTTTGGATGCTATTTCGAACAACACAAAATACTTGGAAATCACCAATTTTCCAGTAACAAAAAGAGAGATGGTTTTGTGTGAGAACAAAATGGATCATCTTAGTAAGCAAGGGCTTGAGATGTTAGAGCTCCAAGGTCTGAATTTAAGTCTATCTATAGAACTTTAAAAGTGTAAAACTTTTGTTGTCTTTGAAGTTGACCTTGGGATGGGTGTAGCATCTGAAGATTATTGGAGTTGGCCATAAGCATAATGCAATGAGTGGGGGGCTCTCAGTACTTTAGGCCCCGTTTGATAATCACTTGGTTTTGGTTTTTTTGAAAATTAAGCTTATAAACACTCCTTTCACCTATGAGTTTCTTTGTTTTATTATTTCCTTTCTAAAGAAAATTCAAAATTCAAGCCCAGTTTTGAAAACTTAAAAAAAGCAGTTTTTAAAATTTTGTTTTGTTTTTAAAACCATAATAAAGAAATTGTGAAGACAATAAGGTATCAAGTGCAATTTTGAAAAGATAGAAAACTAAAAATGAGATGGTTATCAAAAGATGTCTCAATAATTCTATTATCAAGAGAGAGAGAACAAGATTATGTAGATGCAATAGATTTGACTGTTAAAAGTACAGCACAAACACTCATATGCATTGGGTAGGATCTTCTTGGGTGAAAAAGAGACTCCTATTTGAAACTCATCCTATCATTGCCTATTGCAACTTTTCATATCCCTATAATTTAAGCAACTGGAAGATTATTTTAAAGCTTCTTTCCTGTGCTATTTCGGTTTGAACTTTCCCAGGTAATTGCCATATTGGATCGGATCAAGGACAAAAAGAAGGATATCGATGATGAAGACTTTGAGCAATCTGAACTATCTGATGCTCCTCAAGACGACAGGGACTGGGAAGGCGACGATGCTGATGAAGACATAATATATGTACGATAG ATGCATGAGCATCTCGAGATGTCTGGATATCTTACATTACTGCAAAACAAACGAGGCCTTGCTAATCCAAAACCTCAGAAAAAGCTCATAGCTCGCAAATCCGAATCCATTTCAGCCCAACAAAGTAGAGATTTCGATCACAAATATCAAAATTATTCATCTGGGGAATCAAATTTCAGGATGCCGCATCTTCTGCAGCAAATTCATCCTCAACCCCATCATTCGCCACTCAAACTTTCGTCTTCCCTCGCATCTTCACGATTTCCTTCCCAATTGCAAGCTTCACCGCCATGGTTTTGCTCCCAGAGTTCCGTCGCCCTTGTTCGTCAACGTCCGACAATGAGGGGCGCAACCATTCGGTGTATGGCCAATTCACGGAGGGTTAAAATGGTGGCGAAGCAGATTCAGAGGGAGCTTTCCGACATGCTTCTTACTGATAAGGTGTTGCAGTACGCCATTCTTCCTGAGGCCTCTTTGGGAGCGGATAAGTACCTCTCGTCTCTCACCACCATCACCGATGTTGAAGTCTCCGCCGACTTGCAGGTGGTTAAAGTATATGTATCTGTCTTTGGTGATGAAAGAGGAAAGGATGTTGCTATGGCTGGGTTGAAGTCTAAAGCTAAGTATGTTCGAAGTGTATTGGGAAAACGTATGAAGCTTCGACTAACTCCTGAGATACGTTTTATAGAGGATGAATCTTTTGAGAGAGGAAGCAGGGTAATTGCCATATTGGATCGGATCAAGGACAAAAAGAAGGATATCGATGATGAAGACTTTGAGCAATCTGAACTATCTGATGCTCCTCAAGACGACAGGGACTGGGAAGGCGACGATGCTGATGAAGACATAATATATGTACGATAG ATGCATGAGCATCTCGAGATGTCTGGATATCTTACATTACTGCAAAACAAACGAGGCCTTGCTAATCCAAAACCTCAGAAAAAGCTCATAGCTCGCAAATCCGAATCCATTTCAGCCCAACAAAGTAGAGATTTCGATCACAAATATCAAAATTATTCATCTGGGGAATCAAATTTCAGGATGCCGCATCTTCTGCAGCAAATTCATCCTCAACCCCATCATTCGCCACTCAAACTTTCGTCTTCCCTCGCATCTTCACGATTTCCTTCCCAATTGCAAGCTTCACCGCCATGGTTTTGCTCCCAGAGTTCCGTCGCCCTTGTTCGTCAACGTCCGACAATGAGGGGCGCAACCATTCGGTGTATGGCCAATTCACGGAGGGTTAAAATGGTGGCGAAGCAGATTCAGAGGGAGCTTTCCGACATGCTTCTTACTGATAAGGTGTTGCAGTACGCCATTCTTCCTGAGGCCTCTTTGGGAGCGGATAAGTACCTCTCGTCTCTCACCACCATCACCGATGTTGAAGTCTCCGCCGACTTGCAGGTGGTTAAAGTATATGTATCTGTCTTTGGTGATGAAAGAGGAAAGGATGTTGCTATGGCTGGGTTGAAGTCTAAAGCTAAGTATGTTCGAAGTGTATTGGGAAAACGTATGAAGCTTCGACTAACTCCTGAGATACGTTTTATAGAGGATGAATCTTTTGAGAGAGGAAGCAGGGTAATTGCCATATTGGATCGGATCAAGGACAAAAAGAAGGATATCGATGATGAAGACTTTGAGCAATCTGAACTATCTGATGCTCCTCAAGACGACAGGGACTGGGAAGGCGACGATGCTGATGAAGACATAATATATGTACGATAG MHEHLEMSGYLTLLQNKRGLANPKPQKKLIARKSESISAQQSRDFDHKYQNYSSGESNFRMPHLLQQIHPQPHHSPLKLSSSLASSRFPSQLQASPPWFCSQSSVALVRQRPTMRGATIRCMANSRRVKMVAKQIQRELSDMLLTDKVLQYAILPEASLGADKYLSSLTTITDVEVSADLQVVKVYVSVFGDERGKDVAMAGLKSKAKYVRSVLGKRMKLRLTPEIRFIEDESFERGSRVIAILDRIKDKKKDIDDEDFEQSELSDAPQDDRDWEGDDADEDIIYVR Homology
BLAST of Lag0009246 vs. NCBI nr
Match: XP_022948118.1 (probable ribosome-binding factor A, chloroplastic [Cucurbita moschata]) HSP 1 Score: 387.1 bits (993), Expect = 1.3e-103 Identity = 206/227 (90.75%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Lag0009246 vs. NCBI nr
Match: XP_023006992.1 (probable ribosome-binding factor A, chloroplastic [Cucurbita maxima]) HSP 1 Score: 385.2 bits (988), Expect = 5.0e-103 Identity = 203/227 (89.43%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Lag0009246 vs. NCBI nr
Match: KAG6605037.1 (putative ribosome-binding factor A, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 384.4 bits (986), Expect = 8.5e-103 Identity = 205/225 (91.11%), Postives = 215/225 (95.56%), Query Frame = 0
BLAST of Lag0009246 vs. NCBI nr
Match: XP_023534592.1 (probable ribosome-binding factor A, chloroplastic [Cucurbita pepo subsp. pepo]) HSP 1 Score: 383.3 bits (983), Expect = 1.9e-102 Identity = 203/227 (89.43%), Postives = 216/227 (95.15%), Query Frame = 0
BLAST of Lag0009246 vs. NCBI nr
Match: XP_038900542.1 (probable ribosome-binding factor A, chloroplastic [Benincasa hispida]) HSP 1 Score: 374.8 bits (961), Expect = 6.7e-100 Identity = 206/227 (90.75%), Postives = 211/227 (92.95%), Query Frame = 0
BLAST of Lag0009246 vs. ExPASy Swiss-Prot
Match: O65693 (Probable ribosome-binding factor A, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g34730 PE=2 SV=2) HSP 1 Score: 241.1 bits (614), Expect = 1.5e-62 Identity = 143/217 (65.90%), Postives = 167/217 (76.96%), Query Frame = 0
BLAST of Lag0009246 vs. ExPASy Swiss-Prot
Match: B0JRP8 (Ribosome-binding factor A OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rbfA PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.0e-21 Identity = 59/140 (42.14%), Postives = 89/140 (63.57%), Query Frame = 0
BLAST of Lag0009246 vs. ExPASy Swiss-Prot
Match: Q8Z0M8 (Ribosome-binding factor A OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=rbfA PE=3 SV=1) HSP 1 Score: 103.2 bits (256), Expect = 5.0e-21 Identity = 57/134 (42.54%), Postives = 86/134 (64.18%), Query Frame = 0
BLAST of Lag0009246 vs. ExPASy Swiss-Prot
Match: Q93LL7 (Ribosome-binding factor A OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=rbfA PE=3 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.4e-20 Identity = 62/151 (41.06%), Postives = 89/151 (58.94%), Query Frame = 0
BLAST of Lag0009246 vs. ExPASy Swiss-Prot
Match: B8HWS1 (Ribosome-binding factor A OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) OX=395961 GN=rbfA PE=3 SV=1) HSP 1 Score: 100.5 bits (249), Expect = 3.2e-20 Identity = 59/145 (40.69%), Postives = 92/145 (63.45%), Query Frame = 0
BLAST of Lag0009246 vs. ExPASy TrEMBL
Match: A0A6J1G8H2 (probable ribosome-binding factor A, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111451795 PE=3 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 6.3e-104 Identity = 206/227 (90.75%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Lag0009246 vs. ExPASy TrEMBL
Match: A0A6J1KXB5 (probable ribosome-binding factor A, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111499618 PE=3 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 2.4e-103 Identity = 203/227 (89.43%), Postives = 217/227 (95.59%), Query Frame = 0
BLAST of Lag0009246 vs. ExPASy TrEMBL
Match: A0A1S4E1P3 (probable ribosome-binding factor A, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103497269 PE=3 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 1.3e-93 Identity = 198/228 (86.84%), Postives = 206/228 (90.35%), Query Frame = 0
BLAST of Lag0009246 vs. ExPASy TrEMBL
Match: A0A5A7TVW4 (Putative ribosome-binding factor A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00030 PE=3 SV=1) HSP 1 Score: 352.8 bits (904), Expect = 1.3e-93 Identity = 198/228 (86.84%), Postives = 206/228 (90.35%), Query Frame = 0
BLAST of Lag0009246 vs. ExPASy TrEMBL
Match: A0A6J1CYL8 (probable ribosome-binding factor A, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111015387 PE=3 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 7.3e-92 Identity = 191/227 (84.14%), Postives = 200/227 (88.11%), Query Frame = 0
BLAST of Lag0009246 vs. TAIR 10
Match: AT4G34730.1 (ribosome-binding factor A family protein ) HSP 1 Score: 241.1 bits (614), Expect = 1.1e-63 Identity = 143/217 (65.90%), Postives = 167/217 (76.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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