Lag0009236 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0009236
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	B-box zinc finger family protein
Location	chr9: 37162144 .. 37163846 (-)
RNA-Seq Expression	Lag0009236
Synteny	Lag0009236

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGAGCTCTTTGCGACGTCTGTGAAACCGCCGCCGCAACCCTCTTCTGCGCCGCCGACGAGGCCGCCCTTTGCCCCGCCTGCGATCACGAGGTGCTTCTGCGCTAACCCATCTCTTTTTCTTCAAACCCTTTTCTTCTCCGATCATTTTCGTCATCGCTTTGCTTTGAAATTTTCGTTACATGATTCTTATAAGCTCAGAGAATGGTCTATTCTGTAGTGTTCGGGAGCATGGATGTTGATTTGATGGTTTATTGTTGTGAAGTTGTATGAGGAAATGTTTGGCTTGGAAATAACCTTTCTATTTCAAACCAAACACTCTGTTATCAACTCTCTGTAGAAGTCTCGTTTATTATTGGTTTAGAATTGTGCATGATTGATTCTATTGTTTGGGATAAGGAATTTTGAATGTGAAAGAAATATGGGCTAGCAATCAATTTTTGTTTCTCCCTGTTTTTATTATGAACAACCACTTTTTTAGTCTTTGTTTTGTTCTGTATTTTTTATTTTGGGATGTATTTCTGAATTGTGTAAGTTTTAAAAATAAGAACTAGGAAGAAAAAAATATTGAGCTCTCTATGTGATATGTACCAATTCGAAGAGTTTTTTTTTTTTGTGATTTTCTTAGTATTTGGTTGGCTGATGACTGATATGTCTGTTCATCTCATAAATATGGCTTTAATAAGTACTCTAACATCACAAAAACTTACAATTATTGTCATATCATTGTGTTTAAATTTTGAGAATGAAACCAGAGATGAATATCAAACTTTGAAATGAAGAGAAGACAGTAAAATCAGAGAACTTGGAAGTATAAGAAGAAAGTAAAAGATCTGTAACTGGGAGACTCTTTCATGCTCTGGTGCTGCAGGTCCACATGTGTAACAAACTTGCTAGGAGACATGTTCGTGTTGGACTTGCCGAACCCTGCGATGTTCTGCTGTGTGATGTGTGTGAAACCGCACCTGGTTCGTCGCCTTTCCAGTATTTGTTTAGTTTAATTTACCTTTATAGATATTATAACTGGTGATTAAAGAGTGTCTTTGTCATTCAAACCATGGATGTAGCTTTCTTTTACTGTGATGTAGACGGTAGCTCCCTATGCTTGCAATGTGATATGATTGTGCATGTTGGAGGTAAAAGATCCCATGGAAGGTTCCTCCTGTTGAGGCAGAGAATTGAGGTTTGTTTCTGCACTAGAGATCGGTAGTTCGAGTCTTATAACAGTTCCATGGACTGTTGGAAATTAACCTTTTCTGCCTTTGGGATTTCATTTATAGTTTCCAGAGGATAAACCGAGCGAAGTTCATGAATTTTTTCAGAAACCTGGTAGCACAAATGAATTTAGGAGACAAAAAGTTCAGCCTGCTAACCTCACTCTGAGAGAGAATAAACAGTATGAGAATGGCTTGTTAGCTCCAATGGTAGAAAATAGTGATGCTGGTGGCAATATGGACTGCAACTTGATTGACTTGAATGCAGGGCCTCAGAGGATAAATTGTCAAACACCTGATAATCAGGTGTTTCTCTTTTTTTCATCTTCAATTTCAATTATGAAGATTTATTTAGGATACAAGACTGTTCTGAATTCCATGATGATCACATGTCTTCTACTTTAGGAACCGCACGCCGAAGTTCATCGTAGGTACAATCAAGAACCTGAAGAGTATGATGCTTGCAAGATCCTTCAAACAAGAACCTGA

mRNA sequence

ATGCGAGCTCTTTGCGACGTCTGTGAAACCGCCGCCGCAACCCTCTTCTGCGCCGCCGACGAGGCCGCCCTTTGCCCCGCCTGCGATCACGAGGTCCACATGTGTAACAAACTTGCTAGGAGACATGTTCGTGTTGGACTTGCCGAACCCTGCGATGTTCTGCTGTGTGATGTGTGTGAAACCGCACCTGCTTTCTTTTACTGTGATGTAGACGGTAGCTCCCTATGCTTGCAATGTGATATGATTGTGCATGTTGGAGGTAAAAGATCCCATGGAAGGTTCCTCCTGTTGAGGCAGAGAATTGAGTTTCCAGAGGATAAACCGAGCGAAGTTCATGAATTTTTTCAGAAACCTGGTAGCACAAATGAATTTAGGAGACAAAAAGTTCAGCCTGCTAACCTCACTCTGAGAGAGAATAAACAGTATGAGAATGGCTTGTTAGCTCCAATGGTAGAAAATAGTGATGCTGGTGGCAATATGGACTGCAACTTGATTGACTTGAATGCAGGGCCTCAGAGGATAAATTGTCAAACACCTGATAATCAGGAACCGCACGCCGAAGTTCATCGTAGGTACAATCAAGAACCTGAAGAGTATGATGCTTGCAAGATCCTTCAAACAAGAACCTGA

Coding sequence (CDS)

ATGCGAGCTCTTTGCGACGTCTGTGAAACCGCCGCCGCAACCCTCTTCTGCGCCGCCGACGAGGCCGCCCTTTGCCCCGCCTGCGATCACGAGGTCCACATGTGTAACAAACTTGCTAGGAGACATGTTCGTGTTGGACTTGCCGAACCCTGCGATGTTCTGCTGTGTGATGTGTGTGAAACCGCACCTGCTTTCTTTTACTGTGATGTAGACGGTAGCTCCCTATGCTTGCAATGTGATATGATTGTGCATGTTGGAGGTAAAAGATCCCATGGAAGGTTCCTCCTGTTGAGGCAGAGAATTGAGTTTCCAGAGGATAAACCGAGCGAAGTTCATGAATTTTTTCAGAAACCTGGTAGCACAAATGAATTTAGGAGACAAAAAGTTCAGCCTGCTAACCTCACTCTGAGAGAGAATAAACAGTATGAGAATGGCTTGTTAGCTCCAATGGTAGAAAATAGTGATGCTGGTGGCAATATGGACTGCAACTTGATTGACTTGAATGCAGGGCCTCAGAGGATAAATTGTCAAACACCTGATAATCAGGAACCGCACGCCGAAGTTCATCGTAGGTACAATCAAGAACCTGAAGAGTATGATGCTTGCAAGATCCTTCAAACAAGAACCTGA

Protein sequence

MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCETAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGSTNEFRRQKVQPANLTLRENKQYENGLLAPMVENSDAGGNMDCNLIDLNAGPQRINCQTPDNQEPHAEVHRRYNQEPEEYDACKILQTRT

Homology

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BLAST of Lag0009236 vs. NCBI nr
Match: KAF9856762.1 (hypothetical protein H0E87_009145 [Populus deltoides])

HSP 1 Score: 253.8 bits (647), Expect = 1.3e-63
Identity = 126/186 (67.74%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR LCDVCE+AAA LFCAADEAALC +CD +VHMCNKLA RHVRVGLA+P DV  CD+CE
Sbjct: 1   MRMLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPSDVPRCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDMIVHVGGKR+HGR+LLLRQR+EFP DKP    E  Q+P  
Sbjct: 61  KAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGCTEEQGQQPLD 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVE-NSDAGGNMDCNLIDLNAGPQRINCQTP 180
            NE RR + QP  LT REN+Q       PMVE N+D+ G MD  LIDLNA PQR++ + P
Sbjct: 121 DNETRRDQNQPPKLTARENQQNHRASPVPMVENNTDSDGKMDNKLIDLNARPQRVHGKNP 180

Query: 181 DNQEPH 186
            NQE H
Sbjct: 181 TNQENH 186

[Close]

BLAST of Lag0009236 vs. NCBI nr
Match: XP_002306138.1 (B-box zinc finger protein 19 isoform X1 [Populus trichocarpa] >XP_024454836.1 B-box zinc finger protein 19 isoform X1 [Populus trichocarpa] >XP_024454837.1 B-box zinc finger protein 19 isoform X1 [Populus trichocarpa] >AOF43387.1 DBB family protein [Populus trichocarpa] >PNT41571.1 hypothetical protein POPTR_004G162600 [Populus trichocarpa] >RQO89425.1 hypothetical protein POPTR_004G162600 [Populus trichocarpa])

HSP 1 Score: 253.8 bits (647), Expect = 1.3e-63
Identity = 126/186 (67.74%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR LCDVCE+AAA LFCAADEAALC +CD +VHMCNKLA RHVRVGLA+P DV  CD+CE
Sbjct: 1   MRMLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPSDVPQCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDMIVHVGGKR+HGR+LLLRQR+EFP DKP    E  Q+P  
Sbjct: 61  KAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGCTEEQGQQPLD 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVE-NSDAGGNMDCNLIDLNAGPQRINCQTP 180
            NE RR + QP  LT REN+Q       PMVE N+D+ G MD  LIDLNA PQR++ + P
Sbjct: 121 DNETRRDQNQPPKLTARENQQNHRASPVPMVENNTDSDGKMDNKLIDLNARPQRVHGKNP 180

Query: 181 DNQEPH 186
            NQE H
Sbjct: 181 TNQENH 186

[Close]

BLAST of Lag0009236 vs. NCBI nr
Match: XP_002313009.1 (B-box zinc finger protein 19 isoform X1 [Populus trichocarpa] >XP_024463705.1 B-box zinc finger protein 19 isoform X1 [Populus trichocarpa] >XP_024463706.1 B-box zinc finger protein 19 isoform X2 [Populus trichocarpa] >RQO95845.1 hypothetical protein POPTR_009G124400 [Populus trichocarpa] >RQO95846.1 hypothetical protein POPTR_009G124400 [Populus trichocarpa] >RQO95847.1 hypothetical protein POPTR_009G124400 [Populus trichocarpa])

HSP 1 Score: 253.8 bits (647), Expect = 1.3e-63
Identity = 126/186 (67.74%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR +CDVCE+AAA LFCAADEAALC +CD +VH+CNKLA RHVRVGLA+P  V  CD+CE
Sbjct: 1   MRTICDVCESAAAILFCAADEAALCRSCDEKVHLCNKLASRHVRVGLADPSAVPQCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDMIVHVGGKR+HGR+LLLRQR+EFP DKP  + E  Q+P  
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGRMEEQGQQPLD 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVE-NSDAGGNMDCNLIDLNAGPQRINCQTP 180
            NE RR + QP  LT RENKQ       PMVE N+D+ G MD NLIDLNA PQRI+ Q  
Sbjct: 121 HNETRRDQNQPLKLTARENKQNHRASPVPMVENNTDSDGKMDNNLIDLNARPQRIHGQNS 180

Query: 181 DNQEPH 186
            NQE H
Sbjct: 181 TNQENH 186

[Close]

BLAST of Lag0009236 vs. NCBI nr
Match: KAG6761596.1 (hypothetical protein POTOM_034824 [Populus tomentosa])

HSP 1 Score: 253.1 bits (645), Expect = 2.2e-63
Identity = 129/209 (61.72%), Postives = 153/209 (73.21%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR +CDVCE+AAA LFCAADEAALC +CD +VH+CNKLA RHVRVGLA+P  V  CD+CE
Sbjct: 1   MRTICDVCESAAAILFCAADEAALCRSCDEKVHLCNKLASRHVRVGLADPSAVPQCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDMIVHVGGKR+HGR+LLLRQR+EFP DKP  + E  Q+P  
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGRMEEQGQQPLD 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVE-NSDAGGNMDCNLIDLNAGPQRINCQTP 180
            NE RR + QP  LT RENKQ       PM+E N+D+ G MD NLIDLNA PQRI+ Q  
Sbjct: 121 HNETRRDQNQPFKLTARENKQNHRASPVPMIENNTDSDGKMDNNLIDLNARPQRIHGQNS 180

Query: 181 DNQEPH----AEVHRRYNQEPEEYDACKI 205
            NQE H    A     + +EPE  +  ++
Sbjct: 181 TNQENHESSSAVPVGSFKREPENVEKLQV 209

[Close]

BLAST of Lag0009236 vs. NCBI nr
Match: XP_034927675.1 (B-box zinc finger protein 19-like isoform X1 [Populus alba] >XP_034927676.1 B-box zinc finger protein 19-like isoform X2 [Populus alba] >KAG6762908.1 hypothetical protein POTOM_033435 [Populus tomentosa] >TKS05431.1 zinc finger family protein [Populus alba])

HSP 1 Score: 252.3 bits (643), Expect = 3.7e-63
Identity = 130/203 (64.04%), Postives = 151/203 (74.38%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR +CDVCE+AAA LFCAADEAALC +CD +VH+CNKLA RHVRVGLA+P  V  CD+CE
Sbjct: 1   MRTICDVCESAAAILFCAADEAALCRSCDEKVHLCNKLASRHVRVGLADPSAVPQCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDMIVHVGGKR+HGR+LLLRQR+EFP DKP  + E  Q+P  
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGRMEEQGQQPLD 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVE-NSDAGGNMDCNLIDLNAGPQRINCQTP 180
            NE RR + QP  LT RENKQ       PMVE N+D+ G MD NLIDLNA PQRI+ Q  
Sbjct: 121 HNETRRDQNQPLKLTARENKQNHRASPVPMVENNTDSDGQMDNNLIDLNARPQRIHGQNS 180

Query: 181 DNQEPH----AEVHRRYNQEPEE 199
            NQE H    A     + +EPE+
Sbjct: 181 TNQENHESSSAVPVGSFKREPEK 203

[Close]

BLAST of Lag0009236 vs. ExPASy Swiss-Prot
Match: C0SVM5 (B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 6.7e-52
Identity = 108/196 (55.10%), Postives = 128/196 (65.31%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR LCD CE AAA +FCAADEAALC  CD +VHMCNKLA RHVRVGLAEP +   CD+CE
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDM+VHVGGKR+HGRFLLLRQRIEFP DKP E         +
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGDKPKE--------NN 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVENSDAGGNMDCNLIDLNAGPQRINCQTPD 180
           T +            L+  +   NG       N +A G +D  +IDLNA PQR++   P 
Sbjct: 121 TRD-----------NLQNQRVSTNG-------NGEANGKIDDEMIDLNANPQRVH--EPS 168

Query: 181 NQEPHAEVHRRYNQEP 197
           +     +V+   N EP
Sbjct: 181 SNNNGIDVNNENNHEP 168

[Close]

BLAST of Lag0009236 vs. ExPASy Swiss-Prot
Match: Q9SJU5 (B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2)

HSP 1 Score: 197.2 bits (500), Expect = 1.8e-49
Identity = 102/197 (51.78%), Postives = 127/197 (64.47%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR LCD CE+AAA +FCAADEAALC +CD +VH CNKLA RH+RVGLA+P +   CD+CE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDM+VHVGGKR+H RFLLLRQRIEFP DKP+   +   +   
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQK 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVENSDAGGNMDCNLIDLNAGPQRINCQTPD 180
            +  R Q+                         S+  G+ D N+IDLN+ PQR++     
Sbjct: 121 ASSGRGQE-------------------------SNGNGDHDHNMIDLNSNPQRVHEPGSH 172

Query: 181 NQEPHAEVHRRYNQEPE 198
           NQE   +V+   N E E
Sbjct: 181 NQEEGIDVNNANNHEHE 172

[Close]

BLAST of Lag0009236 vs. ExPASy Swiss-Prot
Match: Q96288 (B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1)

HSP 1 Score: 99.0 bits (245), Expect = 6.8e-20
Identity = 63/181 (34.81%), Postives = 91/181 (50.28%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGL-AEPCDVLLCDVC 60
           M+  CDVCE A AT+ C ADEAALCP CD E+H  NKLA +H R+ L +       CD+C
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  ETAPAFFYCDVDGSSLCLQCDMIVHVGGKRS--HGRFLLLRQRIEFPEDKPSEVHEFFQK 120
           +   AF +C  D + LC  CD  +HV   RS  H RFL    ++       S+  E  Q 
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120

Query: 121 PGSTNEFRRQKVQPANLTLRENKQYENGLLAPM----------VENSDAGGNMDCNLIDL 169
             S N+ +  ++ PA  T ++ +Q  +    P           +E++D  G +D    +L
Sbjct: 121 EPSNNQQKANQI-PAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDKKGQLDLGAGEL 180

[Close]

BLAST of Lag0009236 vs. ExPASy Swiss-Prot
Match: Q9SYM2 (B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2)

HSP 1 Score: 94.4 bits (233), Expect = 1.7e-18
Identity = 54/136 (39.71%), Postives = 77/136 (56.62%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGL-AEPCDVLLCDVC 60
           M+  C+VCE A AT+ C ADEAALC ACD ++H  NKLA +H RV L A    +  CD+C
Sbjct: 1   MKIQCNVCEAAEATVLCCADEAALCWACDEKIHAANKLAGKHQRVPLSASASSIPKCDIC 60

Query: 61  ETAPAFFYCDVDGSSLCLQCDMIVHVGGKR--SHGRFLL--LRQRIEFPEDKPSEVHEFF 120
           + A  FF+C  D + LC +CD+ +H       +H RFLL  ++  +E  +  PS      
Sbjct: 61  QEASGFFFCLQDRALLCRKCDVAIHTVNPHVSAHQRFLLTGIKVGLESIDTGPS------ 120

Query: 121 QKPGSTNEFRRQKVQP 132
            K   TN+ +  + +P
Sbjct: 121 TKSSPTNDDKTMETKP 130

[Close]

BLAST of Lag0009236 vs. ExPASy Swiss-Prot
Match: Q9LQZ7 (B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 4.9e-18
Identity = 51/136 (37.50%), Postives = 71/136 (52.21%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEP----CDVLLC 60
           M+  CDVC+   A++FC ADEA+LC  CDH+VH  NKLA +H+R  L  P        LC
Sbjct: 1   MKIRCDVCDKEEASVFCTADEASLCGGCDHQVHHANKLASKHLRFSLLYPSSSNTSSPLC 60

Query: 61  DVCETAPAFFYCDVDGSSLCLQCDMIVHVGGK--RSHGRFLLLRQRIEFPED--KP---- 120
           D+C+   A  +C  D + LC  CD  +H   +  + H RFLL   ++       KP    
Sbjct: 61  DICQDKKALLFCQQDRAILCKDCDSSIHAANEHTKKHDRFLLTGVKLSATSSVYKPTSKS 120

Query: 121 ---SEVHEFFQKPGST 122
              S  ++ F  PGS+
Sbjct: 121 SSSSSSNQDFSVPGSS 136

[Close]

BLAST of Lag0009236 vs. ExPASy TrEMBL
Match: B9H0Y0 (DBB family protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G162600 PE=2 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.1e-64
Identity = 126/186 (67.74%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR LCDVCE+AAA LFCAADEAALC +CD +VHMCNKLA RHVRVGLA+P DV  CD+CE
Sbjct: 1   MRMLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPSDVPQCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDMIVHVGGKR+HGR+LLLRQR+EFP DKP    E  Q+P  
Sbjct: 61  KAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGCTEEQGQQPLD 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVE-NSDAGGNMDCNLIDLNAGPQRINCQTP 180
            NE RR + QP  LT REN+Q       PMVE N+D+ G MD  LIDLNA PQR++ + P
Sbjct: 121 DNETRRDQNQPPKLTARENQQNHRASPVPMVENNTDSDGKMDNKLIDLNARPQRVHGKNP 180

Query: 181 DNQEPH 186
            NQE H
Sbjct: 181 TNQENH 186

[Close]

BLAST of Lag0009236 vs. ExPASy TrEMBL
Match: A0A3N7FND9 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G124400 PE=4 SV=1)

HSP 1 Score: 253.8 bits (647), Expect = 6.1e-64
Identity = 126/186 (67.74%), Postives = 144/186 (77.42%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR +CDVCE+AAA LFCAADEAALC +CD +VH+CNKLA RHVRVGLA+P  V  CD+CE
Sbjct: 1   MRTICDVCESAAAILFCAADEAALCRSCDEKVHLCNKLASRHVRVGLADPSAVPQCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDMIVHVGGKR+HGR+LLLRQR+EFP DKP  + E  Q+P  
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGRMEEQGQQPLD 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVE-NSDAGGNMDCNLIDLNAGPQRINCQTP 180
            NE RR + QP  LT RENKQ       PMVE N+D+ G MD NLIDLNA PQRI+ Q  
Sbjct: 121 HNETRRDQNQPLKLTARENKQNHRASPVPMVENNTDSDGKMDNNLIDLNARPQRIHGQNS 180

Query: 181 DNQEPH 186
            NQE H
Sbjct: 181 TNQENH 186

[Close]

BLAST of Lag0009236 vs. ExPASy TrEMBL
Match: A0A4U5Q6S1 (Zinc finger family protein OS=Populus alba OX=43335 GN=D5086_0000135280 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.8e-63
Identity = 130/203 (64.04%), Postives = 151/203 (74.38%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR +CDVCE+AAA LFCAADEAALC +CD +VH+CNKLA RHVRVGLA+P  V  CD+CE
Sbjct: 1   MRTICDVCESAAAILFCAADEAALCRSCDEKVHLCNKLASRHVRVGLADPSAVPQCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDMIVHVGGKR+HGR+LLLRQR+EFP DKP  + E  Q+P  
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGRMEEQGQQPLD 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVE-NSDAGGNMDCNLIDLNAGPQRINCQTP 180
            NE RR + QP  LT RENKQ       PMVE N+D+ G MD NLIDLNA PQRI+ Q  
Sbjct: 121 HNETRRDQNQPLKLTARENKQNHRASPVPMVENNTDSDGQMDNNLIDLNARPQRIHGQNS 180

Query: 181 DNQEPH----AEVHRRYNQEPEE 199
            NQE H    A     + +EPE+
Sbjct: 181 TNQENHESSSAVPVGSFKREPEK 203

[Close]

BLAST of Lag0009236 vs. ExPASy TrEMBL
Match: A0A4U5QMT5 (Zinc finger family protein OS=Populus alba OX=43335 GN=D5086_0000071930 PE=4 SV=1)

HSP 1 Score: 251.5 bits (641), Expect = 3.0e-63
Identity = 125/186 (67.20%), Postives = 143/186 (76.88%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR LCDVCE+AAA LFCAADEAALC +CD +VHMCNKLA RHVRVGLA+P DV  CD+CE
Sbjct: 1   MRMLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPSDVRRCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDM+VHVGGKR+HGR+LLLRQR+EFP DKP    E  Q+P  
Sbjct: 61  KAPAFFYCEIDGSSLCLQCDMMVHVGGKRTHGRYLLLRQRVEFPGDKPGCTEEQGQQPLD 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVE-NSDAGGNMDCNLIDLNAGPQRINCQTP 180
            NE RR + QP  LT REN Q       PMVE N+D+ G MD  LIDLNA PQR++ + P
Sbjct: 121 DNETRRDQNQPPKLTARENLQNHRASPVPMVENNTDSDGKMDNKLIDLNARPQRVHGKNP 180

Query: 181 DNQEPH 186
            NQE H
Sbjct: 181 ANQENH 186

[Close]

BLAST of Lag0009236 vs. ExPASy TrEMBL
Match: A0A3N7ETL3 (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G162600 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 8.8e-63
Identity = 124/183 (67.76%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR LCDVCE+AAA LFCAADEAALC +CD +VHMCNKLA RHVRVGLA+P DV  CD+CE
Sbjct: 1   MRMLCDVCESAAAILFCAADEAALCRSCDEKVHMCNKLASRHVRVGLADPSDVPQCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDMIVHVGGKR+HGR+LLLRQR+EFP DKP    E  Q+P  
Sbjct: 61  KAPAFFYCEIDGSSLCLQCDMIVHVGGKRTHGRYLLLRQRVEFPGDKPGCTEEQGQQPLD 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVE-NSDAGGNMDCNLIDLNAGPQRINCQTP 180
            NE RR + QP  LT REN+Q       PMVE N+D+ G MD  LIDLNA PQR++ + P
Sbjct: 121 DNETRRDQNQPPKLTARENQQNHRASPVPMVENNTDSDGKMDNKLIDLNARPQRVHGKNP 180

Query: 181 DNQ 183
            NQ
Sbjct: 181 TNQ 183

[Close]

BLAST of Lag0009236 vs. TAIR 10
Match: AT4G38960.1 (B-box type zinc finger family protein )

HSP 1 Score: 205.3 bits (521), Expect = 4.8e-53
Identity = 108/196 (55.10%), Postives = 128/196 (65.31%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR LCD CE AAA +FCAADEAALC  CD +VHMCNKLA RHVRVGLAEP +   CD+CE
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKVHMCNKLASRHVRVGLAEPSNAPCCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDM+VHVGGKR+HGRFLLLRQRIEFP DKP E         +
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGRFLLLRQRIEFPGDKPKE--------NN 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVENSDAGGNMDCNLIDLNAGPQRINCQTPD 180
           T +            L+  +   NG       N +A G +D  +IDLNA PQR++   P 
Sbjct: 121 TRD-----------NLQNQRVSTNG-------NGEANGKIDDEMIDLNANPQRVH--EPS 168

Query: 181 NQEPHAEVHRRYNQEP 197
           +     +V+   N EP
Sbjct: 181 SNNNGIDVNNENNHEP 168

[Close]

BLAST of Lag0009236 vs. TAIR 10
Match: AT2G21320.1 (B-box zinc finger family protein )

HSP 1 Score: 197.2 bits (500), Expect = 1.3e-50
Identity = 102/197 (51.78%), Postives = 127/197 (64.47%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGLAEPCDVLLCDVCE 60
           MR LCD CE+AAA +FCAADEAALC +CD +VH CNKLA RH+RVGLA+P +   CD+CE
Sbjct: 1   MRILCDACESAAAIVFCAADEAALCCSCDEKVHKCNKLASRHLRVGLADPSNAPSCDICE 60

Query: 61  TAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGS 120
            APAFFYC++DGSSLCLQCDM+VHVGGKR+H RFLLLRQRIEFP DKP+   +   +   
Sbjct: 61  NAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHRRFLLLRQRIEFPGDKPNHADQLGLRCQK 120

Query: 121 TNEFRRQKVQPANLTLRENKQYENGLLAPMVENSDAGGNMDCNLIDLNAGPQRINCQTPD 180
            +  R Q+                         S+  G+ D N+IDLN+ PQR++     
Sbjct: 121 ASSGRGQE-------------------------SNGNGDHDHNMIDLNSNPQRVHEPGSH 172

Query: 181 NQEPHAEVHRRYNQEPE 198
           NQE   +V+   N E E
Sbjct: 181 NQEEGIDVNNANNHEHE 172

[Close]

BLAST of Lag0009236 vs. TAIR 10
Match: AT4G38960.3 (B-box type zinc finger family protein )

HSP 1 Score: 184.5 bits (467), Expect = 8.8e-47
Identity = 108/239 (45.19%), Postives = 128/239 (53.56%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHE----------------------------- 60
           MR LCD CE AAA +FCAADEAALC  CD +                             
Sbjct: 1   MRILCDACENAAAIIFCAADEAALCRPCDEKALHMRLDISKCSESVKRVQIVETSSLIWW 60

Query: 61  --------------VHMCNKLARRHVRVGLAEPCDVLLCDVCETAPAFFYCDVDGSSLCL 120
                         VHMCNKLA RHVRVGLAEP +   CD+CE APAFFYC++DGSSLCL
Sbjct: 61  IKMGTFCLQSLHLVVHMCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCL 120

Query: 121 QCDMIVHVGGKRSHGRFLLLRQRIEFPEDKPSEVHEFFQKPGSTNEFRRQKVQPANLTLR 180
           QCDM+VHVGGKR+HGRFLLLRQRIEFP DKP E         +T +            L+
Sbjct: 121 QCDMVVHVGGKRTHGRFLLLRQRIEFPGDKPKE--------NNTRD-----------NLQ 180

Query: 181 ENKQYENGLLAPMVENSDAGGNMDCNLIDLNAGPQRINCQTPDNQEPHAEVHRRYNQEP 197
             +   NG       N +A G +D  +IDLNA PQR++   P +     +V+   N EP
Sbjct: 181 NQRVSTNG-------NGEANGKIDDEMIDLNANPQRVH--EPSSNNNGIDVNNENNHEP 211

[Close]

BLAST of Lag0009236 vs. TAIR 10
Match: AT4G38960.2 (B-box type zinc finger family protein )

HSP 1 Score: 157.1 bits (396), Expect = 1.5e-38
Identity = 84/163 (51.53%), Postives = 102/163 (62.58%), Query Frame = 0


Query: 34  MCNKLARRHVRVGLAEPCDVLLCDVCETAPAFFYCDVDGSSLCLQCDMIVHVGGKRSHGR 93
           MCNKLA RHVRVGLAEP +   CD+CE APAFFYC++DGSSLCLQCDM+VHVGGKR+HGR
Sbjct: 1   MCNKLASRHVRVGLAEPSNAPCCDICENAPAFFYCEIDGSSLCLQCDMVVHVGGKRTHGR 60

Query: 94  FLLLRQRIEFPEDKPSEVHEFFQKPGSTNEFRRQKVQPANLTLRENKQYENGLLAPMVEN 153
           FLLLRQRIEFP DKP E         +T +            L+  +   NG       N
Sbjct: 61  FLLLRQRIEFPGDKPKE--------NNTRD-----------NLQNQRVSTNG-------N 120

Query: 154 SDAGGNMDCNLIDLNAGPQRINCQTPDNQEPHAEVHRRYNQEP 197
            +A G +D  +IDLNA PQR++   P +     +V+   N EP
Sbjct: 121 GEANGKIDDEMIDLNANPQRVH--EPSSNNNGIDVNNENNHEP 135

[Close]

BLAST of Lag0009236 vs. TAIR 10
Match: AT1G06040.1 (B-box zinc finger family protein )

HSP 1 Score: 99.0 bits (245), Expect = 4.8e-21
Identity = 63/181 (34.81%), Postives = 91/181 (50.28%), Query Frame = 0


Query: 1   MRALCDVCETAAATLFCAADEAALCPACDHEVHMCNKLARRHVRVGL-AEPCDVLLCDVC 60
           M+  CDVCE A AT+ C ADEAALCP CD E+H  NKLA +H R+ L +       CD+C
Sbjct: 1   MKIQCDVCEKAPATVICCADEAALCPQCDIEIHAANKLASKHQRLHLNSLSTKFPRCDIC 60

Query: 61  ETAPAFFYCDVDGSSLCLQCDMIVHVGGKRS--HGRFLLLRQRIEFPEDKPSEVHEFFQK 120
           +   AF +C  D + LC  CD  +HV   RS  H RFL    ++       S+  E  Q 
Sbjct: 61  QEKAAFIFCVEDRALLCRDCDESIHVANSRSANHQRFLATGIKVALTSTICSKEIEKNQP 120

Query: 121 PGSTNEFRRQKVQPANLTLRENKQYENGLLAPM----------VENSDAGGNMDCNLIDL 169
             S N+ +  ++ PA  T ++ +Q  +    P           +E++D  G +D    +L
Sbjct: 121 EPSNNQQKANQI-PAKSTSQQQQQPSSATPLPWAVDDFFHFSDIESTDKKGQLDLGAGEL 180

The following BLAST results are available for this feature:

BLAST of Lag0009236 vs. NCBI nr


Match Name	E-value	Identity	Description
KAF9856762.1	1.3e-63	67.74	hypothetical protein H0E87_009145 [Populus deltoides]	[more]
XP_002306138.1	1.3e-63	67.74	B-box zinc finger protein 19 isoform X1 [Populus trichocarpa] >XP_024454836.1 B-...	[more]
XP_002313009.1	1.3e-63	67.74	B-box zinc finger protein 19 isoform X1 [Populus trichocarpa] >XP_024463705.1 B-...	[more]
KAG6761596.1	2.2e-63	61.72	hypothetical protein POTOM_034824 [Populus tomentosa]	[more]
XP_034927675.1	3.7e-63	64.04	B-box zinc finger protein 19-like isoform X1 [Populus alba] >XP_034927676.1 B-bo...	[more]

BLAST of Lag0009236 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
C0SVM5	6.7e-52	55.10	B-box zinc finger protein 19 OS=Arabidopsis thaliana OX=3702 GN=BBX19 PE=1 SV=1	[more]
Q9SJU5	1.8e-49	51.78	B-box zinc finger protein 18 OS=Arabidopsis thaliana OX=3702 GN=BBX18 PE=1 SV=2	[more]
Q96288	6.8e-20	34.81	B-box zinc finger protein 24 OS=Arabidopsis thaliana OX=3702 GN=BBX24 PE=1 SV=1	[more]
Q9SYM2	1.7e-18	39.71	B-box zinc finger protein 22 OS=Arabidopsis thaliana OX=3702 GN=BBX22 PE=1 SV=2	[more]
Q9LQZ7	4.9e-18	37.50	B-box zinc finger protein 21 OS=Arabidopsis thaliana OX=3702 GN=BBX21 PE=1 SV=1	[more]

BLAST of Lag0009236 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
B9H0Y0	6.1e-64	67.74	DBB family protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G162600 PE=2 SV=1	[more]
A0A3N7FND9	6.1e-64	67.74	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_009G124400 PE=4 ...	[more]
A0A4U5Q6S1	1.8e-63	64.04	Zinc finger family protein OS=Populus alba OX=43335 GN=D5086_0000135280 PE=4 SV=...	[more]
A0A4U5QMT5	3.0e-63	67.20	Zinc finger family protein OS=Populus alba OX=43335 GN=D5086_0000071930 PE=4 SV=...	[more]
A0A3N7ETL3	8.8e-63	67.76	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G162600 PE=4 ...	[more]

BLAST of Lag0009236 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G38960.1	4.8e-53	55.10	B-box type zinc finger family protein	[more]
AT2G21320.1	1.3e-50	51.78	B-box zinc finger family protein	[more]
AT4G38960.3	8.8e-47	45.19	B-box type zinc finger family protein	[more]
AT4G38960.2	1.5e-38	51.53	B-box type zinc finger family protein	[more]
AT1G06040.1	4.8e-21	34.81	B-box zinc finger family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000315	B-box-type zinc finger	SMART	SM00336	bboxneu5	coord: 51..96 e-value: 9.2E-7 score: 38.5 coord: 1..47 e-value: 1.3E-4 score: 31.3
IPR000315	B-box-type zinc finger	PFAM	PF00643	zf-B_box	coord: 4..34 e-value: 1.7E-5 score: 24.8
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 51..96 score: 8.930027
IPR000315	B-box-type zinc finger	PROSITE	PS50119	ZF_BBOX	coord: 1..47 score: 10.153325
None	No IPR available	GENE3D	3.30.160.60	Classic Zinc Finger	coord: 2..92 e-value: 1.5E-5 score: 27.4
None	No IPR available	PANTHER	PTHR31832	B-BOX ZINC FINGER PROTEIN 22	coord: 1..202
None	No IPR available	PANTHER	PTHR31832:SF5	B-BOX ZINC FINGER PROTEIN 19	coord: 1..202
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 55..96 e-value: 2.21031E-9 score: 49.6035
None	No IPR available	CDD	cd19821	Bbox1_BBX-like	coord: 4..47 e-value: 4.62919E-16 score: 67.3227

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0009236.1	Lag0009236.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009640	photomorphogenesis
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0008270	zinc ion binding