Lag0009215 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0009215
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	WD repeat-containing protein 13
Location	chr9: 36924746 .. 36928944 (-)
RNA-Seq Expression	Lag0009215
Synteny	Lag0009215

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAAGCGTGTGGGCCCTGTTGTTGAGAACCAAGATGATGAAATGAGATGCGATGTTGCATTGAGAAGACCTTGTCTTGGAGTAGAGACAAGGGTTGAGGCAAGGGTTGAGCCTTTGGACTTGGCTTGGAGTAGAGGCAAGTCGACTAGAATCAGGAATGAGGGGAAATACACACATGAGTGGCGTGTATGGTTGAGTAAGGCTCAATTGTTAGTAAAAGTTTGGTTGAGGATGAGAGAAACTTGCCTAAGGTCCGATGAAGCCACAAAGTCTTGTGAAAAGTTAATATGAGTTAGAGATTAGCCTTAAGGTTGGCCGTGGTCGAGTGTAGATCATGGTGCTGCACAGTTGAAACAATACGGTTGTGACACGAAGAGCAGACTTTCCCAGTGAAGAGCTTACCTGAAAAATCAGTGTTATTTTATGAATATGGTAAAAAAAAAGTGCGAGTTATCTTGGGACAAGAGTTTTGCAAGGTCTAGAAATTGCTACAAGAAATATACTATTCATGATAGGAGATGCATACTTCTTCTCTATCAAGCTAGTGGTAGTAGTAATGCTGGAAAACTAACATAAGCTCCTTCCACGGGAAGATTTTGTGAGAGTACTAGTTAGGGATATGTTGGGAATAGTAATGGAAGATGAGTAAGGGTATAGTGGTAATTAGATAGGAGTGCTTTGGTTATAAATAGGGGAGCTAGGGTCTTAGAATGAGGGGAGAATTTTGGTAGTCTCATAGTGGGACTTGGGAGAGAGTTAGTTAGCCCTCTCGAAAGACCCTGCTCCCCTATTTATAACCGAAGGACTCCTATCTAATTACCACTATACCCTTACTCATCTTCCACTACTATTCCCAACATATCCCTAACTAGTTCTCTCACAGATTTATCTTAGTGATCGACAGTCCTGGAAGTAGAAAATCGATGAGCTTCAATGCTCAATTCAGAATCTTTCCCATCAAATTGCCAGTTGAAATACCATTGGCAATCTGAGGGAAAGGAGAACTTTTGGAGAAAGGCTACCCAACCGAGAAGAAAGGGAAGAAATGCACAAAATTTTTAGTTGGGTGCAAGATAATAACAGTAGAAGAGTGTGAGAAAAGACTATTGGCTTGAGGTTTGGGCCTTTGTTAGATTCTATGTTTCTCTATGGGCTTCCGTGACAAGGTCTTTTTGTAATTACCCTCTAGGTCTTATTTTACTAGATTGGAACCCCTTTTTGTAATTTGCCTCCCTTTTGTAGACTTTTTTTTTTTTTTTTATGCCCTTACATTCTTTCATTTTTTCTCATAAAAAAAAAAAAACTATAGATTTGGCTAGAAACTAACGCAAGAAAGTGATTTGGAGTCAGCTTCAGAGGAGCAAATCTGATTCAGAAGGGGAAAAAAAAGCAAAAACCATACAAAAGGGAAGCTTAGCCTTTAAATTTATTGGCCAAGCTTTGAGTTACTGGAAACAAATGACAATAACGCTAAAAATTAAACTTAAAGTAAAAGTGAAGTTACTACCTAAGACTAATTAAAAGAGTTAAAACAAATACAAAGAAATTTACAAGAAATACCTCAGCATATCTACATCATGTCCTCTTATTACAACATAATATGTCACGTTCACCTTTTTGTTGTAGAACTCTTTAGGCTGATGCAATCAATGAAGCCTGTGATGGGAAATGTCGTTCAGGAGGAATCCAAGATTTTTTGTTGGAAGCAATAGATAGTCTCTTGAGATTTTTTTAATTAAGTTATCTTTTAGCTCCTAAATTGAGTTCTTCGGCTATGGAATTTTGAGTCAGTCTTCTTTGTTATTAATATAAATTGAGAGATGTTTTTGTAATACTTGTGAGTGAGCAAGTGGGATGATAACTCATCTTTTGTGGTCTTTCTTTTGTAGATGTTTATGTTTCATTATGTCTAGTACCCAACTATATATATACATAGGTATGAATATGTATATATGCATATTTATACAGATAATATTTTGAAATCTAATGGAACGTTTTCCTTTTCATTTTTATTATCATGGTAGGTAAATAACAACTTCGTCTCAGTTGGCAATGCAAATAAGGAAATCACGGTAAGGATGATGCAAGAAAAATGATGATATTTTTAAGTCATGATTGTCCTGGAAATTAATTTAATTGAAAGCTGTATTTTTCAGTCATGATTGTCCTAAGAGTGTAATTTAGTTGAAAAGTAAGATGACTTTCACTCTCTCTCTTCTTTTAGTTTTAGATTATTATTTTATTAGAAATTGAACTCTTGCCAACCTGAGTATAACTCAACTAGTTAAAAAATATATTCTCGTTCAATAGGTTAGAGGTTCAAATCTCCATTTCCTCATGTTGAACTGGAAAAAAAAAAAAAAAGGAAGTTGAACTCTCTCACACATGCACATGGATTGGACATAATTAATATGATTCTTGGGCGTGAATGCATAGAGGAGGATCATTCTCTATTTCCGTGTCATGTTTGTTCTAAGAGTAAAATTTATTCAAAAACTAATGTCCCTCACGCACACAGACCCAGGGGGAAGGGGGGATCTCATGAACGTAATAGTCAATGTGACAGTCAAAGGAGGATTCTGACCCGCACAGGGGGATCTAACACAGGCAATGTGATGCTTGCATGCAGAGAGGAACATATTCAAATATAGTCAATGCAACGCCGGACATACAGAGATAGGAGGATCATACTTAGTCATGTCATGCTTGTAGTAAATACGAACAACTGTAAAAACTGACTTTTAAAAACATAAGATCGTGTTCCTTGGAGATATCTTGTATTTTGTTTTGAGTTGTGAGTTTGACTCTCTCCAAGTCATTGCTCGAGGGGAAAAAGTTTGACGCTTGGATATAAAGTCTTTCATCTATTTAAATTTCTTTTGGCATCTAATACTTTGTTTTTGTATTGTCTGATTTTTTAGGACCTGATTTATGAAATGTTCTACAGAACAACACTTCACCAAAATTTTCTCATTCCTGATAATTCTATCTTTTCCAAAATATGTCTAACTAATTTTGATGAATATTTTAGGTGTTCAATTTCAGCACTGGGAGGATTGTTACAAAATCAGTTCTTGATAGTGAGGTTACCTCCATGGACCATGATCATACTGGTCAGCTCCTTTTCTGTGGGGATAAATATGTATGTCATTGGCAAAATTATTATATAAACTTTTTTCTCTAAAAACCAAATGTTGATTTGCTAAGATTGACTATTGAGATTGCATGTATAGGGATATGTTTACTCTGTGAGCATGAACTCACATACAGGAGCATTATCCCGTTCTCACCGCCAGTGGTGTAGTAGTCGACGAAAATCTCCTGTATTAACTGTACAATATCGAAGCTTTTCTCTGCTTGCCAGGGGCCCTGTATTGCTAACTTGCACTCAAGATGGGAACTTGTCTTTCTTCAGGTTTTGTCAACATAAATGGCTTTCATTTTATTCTTCTATTTCTCGTTGACTACTTATAAGGTTTTATGTTGATGTTCTAGTATTGCTTTGGAAGTTCAAGGATATTTGACCCTCCGCTGCTCACTCAAATTAGCTCCAAGGGTACATAGCATCCGTGCTTCATTCTGCCCCCTACTCTCCCTTGAAAAAGGAGAGTATATAGGTAAGGAATGTTTATTTAATGTTTCATCATAAATGGTCATTTTGTGGAAGGTCGTATTAGCACTCAATATTAACGTAGATCAGAAATCATATGATCAAGTGGTGAAAATAGACATAATTGTATGCTCATACAGGCAGATACAGGTTTAGAAGTATCATTGTAATCCATCCCATGAGATGGAAATCATGAATATTTAAAACGTGTAGACTCTGCATACAAATTTCATACTATTCCGATGCTCTCTGTTTGTTTGACAATGTCGTTGATTTCTGTGATATTTGGATTTTGTTATGGATTTAAGTCGCAGGAAGTGAGGATTCAAATGTCTACTTCTATGATTTAACACGACCTAAACATACTTGTGTCAACAAGCTACAGGTTCACATTTTCTTCATGCTTTCTCTCCAACGTAAAACTATTTAGTTGACAGTTCGTTGTCGATTGACCAGCACATATGTGACTCTGCAGGGCCACCAATTTCCAGTCATTGCTGTTGCCTGGAATCATGGGGAGAATTTGTTGGCTTCGTCAGATTTTTATGGGACGGTAATTGTATGGAAGAGATCAAAGACGAGTTAA

mRNA sequence

ATGCAAAAGCGTGTGGGCCCTGTTGTTGAGAACCAAGATGATGAAATGAGATGCGATGTTGCATTGAGAAGACCTTGTCTTGGAGTAGAGACAAGGGTTGAGGCAAGGGTTGAGCCTTTGGACTTGGCTTGGAGTAGAGGCAAGTCGACTAGAATCAGGAATGAGGGGAAATACACACATGAGTGGCGTGTAAATAACAACTTCGTCTCAGTTGGCAATGCAAATAAGGAAATCACGGTGTTCAATTTCAGCACTGGGAGGATTGTTACAAAATCAGTTCTTGATAGTGAGGTTACCTCCATGGACCATGATCATACTGGTCAGCTCCTTTTCTGTGGGGATAAATATGGATATGTTTACTCTGTGAGCATGAACTCACATACAGGAGCATTATCCCGTTCTCACCGCCAGTGGTGTAGTAGTCGACGAAAATCTCCTGTATTAACTGTACAATATCGAAGCTTTTCTCTGCTTGCCAGGGGCCCTGTATTGCTAACTTGCACTCAAGATGGGAACTTGTCTTTCTTCAGTATTGCTTTGGAAGTTCAAGGATATTTGACCCTCCGCTGCTCACTCAAATTAGCTCCAAGGGTACATAGCATCCGTGCTTCATTCTGCCCCCTACTCTCCCTTGAAAAAGGAGAGTATATAGTCGCAGGAAGTGAGGATTCAAATGTCTACTTCTATGATTTAACACGACCTAAACATACTTGTGTCAACAAGCTACAGGGCCACCAATTTCCAGTCATTGCTGTTGCCTGGAATCATGGGGAGAATTTGTTGGCTTCGTCAGATTTTTATGGGACGGTAATTGTATGGAAGAGATCAAAGACGAGTTAA

Coding sequence (CDS)

ATGCAAAAGCGTGTGGGCCCTGTTGTTGAGAACCAAGATGATGAAATGAGATGCGATGTTGCATTGAGAAGACCTTGTCTTGGAGTAGAGACAAGGGTTGAGGCAAGGGTTGAGCCTTTGGACTTGGCTTGGAGTAGAGGCAAGTCGACTAGAATCAGGAATGAGGGGAAATACACACATGAGTGGCGTGTAAATAACAACTTCGTCTCAGTTGGCAATGCAAATAAGGAAATCACGGTGTTCAATTTCAGCACTGGGAGGATTGTTACAAAATCAGTTCTTGATAGTGAGGTTACCTCCATGGACCATGATCATACTGGTCAGCTCCTTTTCTGTGGGGATAAATATGGATATGTTTACTCTGTGAGCATGAACTCACATACAGGAGCATTATCCCGTTCTCACCGCCAGTGGTGTAGTAGTCGACGAAAATCTCCTGTATTAACTGTACAATATCGAAGCTTTTCTCTGCTTGCCAGGGGCCCTGTATTGCTAACTTGCACTCAAGATGGGAACTTGTCTTTCTTCAGTATTGCTTTGGAAGTTCAAGGATATTTGACCCTCCGCTGCTCACTCAAATTAGCTCCAAGGGTACATAGCATCCGTGCTTCATTCTGCCCCCTACTCTCCCTTGAAAAAGGAGAGTATATAGTCGCAGGAAGTGAGGATTCAAATGTCTACTTCTATGATTTAACACGACCTAAACATACTTGTGTCAACAAGCTACAGGGCCACCAATTTCCAGTCATTGCTGTTGCCTGGAATCATGGGGAGAATTTGTTGGCTTCGTCAGATTTTTATGGGACGGTAATTGTATGGAAGAGATCAAAGACGAGTTAA

Protein sequence

MQKRVGPVVENQDDEMRCDVALRRPCLGVETRVEARVEPLDLAWSRGKSTRIRNEGKYTHEWRVNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVSMNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQGYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS

Homology

[Close]

BLAST of Lag0009215 vs. NCBI nr
Match: XP_022146138.1 (WD repeat-containing protein 13 [Momordica charantia])

HSP 1 Score: 425.2 bits (1092), Expect = 4.2e-115
Identity = 204/216 (94.44%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+SVGNANKEITVFNFSTGR+VTK+VLD EVTSMDHDHTGQLLFCGD +GYVYSVS
Sbjct: 267 VNNNFLSVGNANKEITVFNFSTGRVVTKTVLDGEVTSMDHDHTGQLLFCGDAHGYVYSVS 326

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           MNSHTGALSRSHRQWCSSRRKSPV TVQYRSFSLLARGPVLLTCTQDGNLSFFS+ALEVQ
Sbjct: 327 MNSHTGALSRSHRQWCSSRRKSPVSTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEVQ 386

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ
Sbjct: 387 GYLTLRCSLKLAPRIHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 446

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GH+FPVIAVAWNHGENLLASSDF+GTVIVWKRSK S
Sbjct: 447 GHRFPVIAVAWNHGENLLASSDFHGTVIVWKRSKMS 482

[Close]

BLAST of Lag0009215 vs. NCBI nr
Match: XP_004150062.1 (WD repeat-containing protein 13 isoform X1 [Cucumis sativus] >XP_031737023.1 WD repeat-containing protein 13 isoform X1 [Cucumis sativus])

HSP 1 Score: 422.9 bits (1086), Expect = 2.1e-114
Identity = 205/216 (94.91%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+SVGNANKEITVFNFSTGRIVTK VLDSEVTSMDHDHTGQLLFCGD  GYVYSVS
Sbjct: 275 VNNNFLSVGNANKEITVFNFSTGRIVTKLVLDSEVTSMDHDHTGQLLFCGDANGYVYSVS 334

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           MNSHTGAL+R+HRQWCSSRRKSPV TVQYRSFSLLAR PVLLTCTQDGNLSFFSIALEVQ
Sbjct: 335 MNSHTGALTRTHRQWCSSRRKSPVSTVQYRSFSLLARSPVLLTCTQDGNLSFFSIALEVQ 394

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ
Sbjct: 395 GYLTLRCSLKLAPRIHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 454

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GH+FPVI VAWNHGENLLASSDFYGTVIVWKRSKTS
Sbjct: 455 GHRFPVIGVAWNHGENLLASSDFYGTVIVWKRSKTS 490

[Close]

BLAST of Lag0009215 vs. NCBI nr
Match: XP_011649251.1 (WD repeat-containing protein 13 isoform X2 [Cucumis sativus] >KGN61888.2 hypothetical protein Csa_006278 [Cucumis sativus])

HSP 1 Score: 422.9 bits (1086), Expect = 2.1e-114
Identity = 205/216 (94.91%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+SVGNANKEITVFNFSTGRIVTK VLDSEVTSMDHDHTGQLLFCGD  GYVYSVS
Sbjct: 270 VNNNFLSVGNANKEITVFNFSTGRIVTKLVLDSEVTSMDHDHTGQLLFCGDANGYVYSVS 329

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           MNSHTGAL+R+HRQWCSSRRKSPV TVQYRSFSLLAR PVLLTCTQDGNLSFFSIALEVQ
Sbjct: 330 MNSHTGALTRTHRQWCSSRRKSPVSTVQYRSFSLLARSPVLLTCTQDGNLSFFSIALEVQ 389

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ
Sbjct: 390 GYLTLRCSLKLAPRIHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 449

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GH+FPVI VAWNHGENLLASSDFYGTVIVWKRSKTS
Sbjct: 450 GHRFPVIGVAWNHGENLLASSDFYGTVIVWKRSKTS 485

[Close]

BLAST of Lag0009215 vs. NCBI nr
Match: XP_022986518.1 (WD repeat-containing protein 13 [Cucurbita maxima])

HSP 1 Score: 422.5 bits (1085), Expect = 2.7e-114
Identity = 205/216 (94.91%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+SVGNANKEITVFNFSTGRIVTK VLDSEVTSMDHDHTGQ+LFCGD  GYVYSVS
Sbjct: 265 VNNNFLSVGNANKEITVFNFSTGRIVTKLVLDSEVTSMDHDHTGQILFCGDGNGYVYSVS 324

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           MNSHTGALSR+HRQWCSSRRKSPV TVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ
Sbjct: 325 MNSHTGALSRAHRQWCSSRRKSPVCTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 384

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ
Sbjct: 385 GYLTLRCSLKLAPRIHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 444

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GHQFPVI VAWNHGENLLASSD YGTVIVWKRSK S
Sbjct: 445 GHQFPVIGVAWNHGENLLASSDLYGTVIVWKRSKIS 480

[Close]

BLAST of Lag0009215 vs. NCBI nr
Match: TYK02639.1 (WD repeat-containing protein 13 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 421.8 bits (1083), Expect = 4.7e-114
Identity = 204/216 (94.44%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+SVGNANKEITV+NFSTGRIVTK VLDSEVTSMDHDHTGQLLFCGD  GYVYSVS
Sbjct: 139 VNNNFLSVGNANKEITVYNFSTGRIVTKLVLDSEVTSMDHDHTGQLLFCGDANGYVYSVS 198

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           MNSHTGAL+R+HRQWCSSRRKSPV TVQYRSFSLLAR PVLLTCTQDGNLSFFSIALEVQ
Sbjct: 199 MNSHTGALTRTHRQWCSSRRKSPVSTVQYRSFSLLARSPVLLTCTQDGNLSFFSIALEVQ 258

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ
Sbjct: 259 GYLTLRCSLKLAPRIHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 318

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GH+FPVI VAWNHGENLLASSDFYGTVIVWKRSKTS
Sbjct: 319 GHRFPVIGVAWNHGENLLASSDFYGTVIVWKRSKTS 354

[Close]

BLAST of Lag0009215 vs. ExPASy Swiss-Prot
Match: Q9H1Z4 (WD repeat-containing protein 13 OS=Homo sapiens OX=9606 GN=WDR13 PE=1 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 9.4e-33
Identity = 87/217 (40.09%), Postives = 123/217 (56.68%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVT--KSVLDSEVTSMDHDHTGQLLFCGDKYGYVYS 123
           VNNN   VGNA   + V N STG+ V    S L   V ++  D  G+LL+ GD +G V+S
Sbjct: 271 VNNNLTVVGNAKHNVHVMNISTGKKVKGGSSKLTGRVLALSFDAPGRLLWAGDDHGSVFS 330

Query: 124 VSMNSHTGALSRSHRQWCSSRRKSPVLTVQYRSF-SLLARGPVLLTCTQDGNLSFFSIAL 183
              +  TG L+++ R        SPV ++  RS+ S  AR P LL       L  + + +
Sbjct: 331 FLFDMATGKLTKAKR--LVVHEGSPVTSISARSWVSREARDPSLLINACLNKLLLYRV-V 390

Query: 184 EVQGYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVN 243
           + +G L L+ S  +    H +R+ FCPL+S  +G  +V GSED  V+F+D+ R     VN
Sbjct: 391 DNEGTLQLKRSFPIEQSSHPVRSIFCPLMSFRQGACVVTGSEDMCVHFFDVERAAKAAVN 450

Query: 244 KLQGHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSK 278
           KLQGH  PV+ V++N  E+LLASSD  G VIVW+R +
Sbjct: 451 KLQGHSAPVLDVSFNCDESLLASSDASGMVIVWRREQ 484

[Close]

BLAST of Lag0009215 vs. ExPASy Swiss-Prot
Match: Q91V09 (WD repeat-containing protein 13 OS=Mus musculus OX=10090 GN=Wdr13 PE=1 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32
Identity = 87/217 (40.09%), Postives = 122/217 (56.22%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVT--KSVLDSEVTSMDHDHTGQLLFCGDKYGYVYS 123
           VNNN   VGNA   + V N STG+ V    S L   V ++  D  G+LL+ GD  G V+S
Sbjct: 271 VNNNLTVVGNAKHNVHVMNISTGKKVKGGSSKLTGRVLALSFDAPGRLLWAGDDRGSVFS 330

Query: 124 VSMNSHTGALSRSHRQWCSSRRKSPVLTVQYRSF-SLLARGPVLLTCTQDGNLSFFSIAL 183
              +  TG L+++ R        SPV ++  RS+ S  AR P LL       L  + + +
Sbjct: 331 FLFDMATGKLTKAKR--LVVHEGSPVTSISARSWVSREARDPSLLINACLNKLLLYRV-V 390

Query: 184 EVQGYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVN 243
           + +G L L+ S  +    H +R+ FCPL+S  +G  +V GSED  V+F+D+ R     VN
Sbjct: 391 DNEGALQLKRSFPIEQSSHPVRSIFCPLMSFRQGACVVTGSEDMCVHFFDVERAAKAAVN 450

Query: 244 KLQGHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSK 278
           KLQGH  PV+ V++N  E+LLASSD  G VIVW+R +
Sbjct: 451 KLQGHSAPVLDVSFNCDESLLASSDASGMVIVWRREQ 484

[Close]

BLAST of Lag0009215 vs. ExPASy Swiss-Prot
Match: Q6DKP5 (WD repeat-containing protein 13 OS=Pan troglodytes OX=9598 GN=WDR13 PE=3 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32
Identity = 87/217 (40.09%), Postives = 122/217 (56.22%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVT--KSVLDSEVTSMDHDHTGQLLFCGDKYGYVYS 123
           VNNN   VGNA   + V N STG+ V    S L   V ++  D  G+LL+ GD  G V+S
Sbjct: 271 VNNNLTVVGNAKHNVHVMNISTGKKVKGGSSKLTGRVLALSFDAPGRLLWAGDDRGSVFS 330

Query: 124 VSMNSHTGALSRSHRQWCSSRRKSPVLTVQYRSF-SLLARGPVLLTCTQDGNLSFFSIAL 183
              +  TG L+++ R        SPV ++  RS+ S  AR P LL       L  + + +
Sbjct: 331 FLFDMATGKLTKAKR--LVVHEGSPVTSISARSWVSREARDPSLLINACLNKLLLYRV-V 390

Query: 184 EVQGYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVN 243
           + +G L L+ S  +    H +R+ FCPL+S  +G  +V GSED  V+F+D+ R     VN
Sbjct: 391 DNEGTLQLKRSFPIEQSSHPVRSIFCPLMSFRQGACVVTGSEDMCVHFFDVERAAKAAVN 450

Query: 244 KLQGHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSK 278
           KLQGH  PV+ V++N  E+LLASSD  G VIVW+R +
Sbjct: 451 KLQGHSAPVLDVSFNCDESLLASSDASGMVIVWRREQ 484

[Close]

BLAST of Lag0009215 vs. ExPASy Swiss-Prot
Match: Q5RF24 (WD repeat-containing protein 13 OS=Pongo abelii OX=9601 GN=WDR13 PE=2 SV=1)

HSP 1 Score: 140.6 bits (353), Expect = 2.7e-32
Identity = 87/217 (40.09%), Postives = 122/217 (56.22%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVT--KSVLDSEVTSMDHDHTGQLLFCGDKYGYVYS 123
           VNNN   VGNA   + V N STG+ V    S L   V ++  D  G+LL+ GD  G V+S
Sbjct: 271 VNNNLTVVGNAKHNVHVMNISTGKKVKGGSSKLTGRVLALSFDAPGRLLWAGDDRGSVFS 330

Query: 124 VSMNSHTGALSRSHRQWCSSRRKSPVLTVQYRSF-SLLARGPVLLTCTQDGNLSFFSIAL 183
              +  TG L+++ R        SPV ++  RS+ S  AR P LL       L  + + +
Sbjct: 331 FLFDMATGKLTKAKR--LVVHEGSPVTSISARSWVSREARDPSLLINACLNKLLLYRV-V 390

Query: 184 EVQGYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVN 243
           + +G L L+ S  +    H +R+ FCPL+S  +G  +V GSED  V+F+D+ R     VN
Sbjct: 391 DNEGTLQLKRSFPIEQSSHPVRSIFCPLMSFRQGACVVTGSEDMCVHFFDVERAAKAAVN 450

Query: 244 KLQGHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSK 278
           KLQGH  PV+ V++N  E+LLASSD  G VIVW+R +
Sbjct: 451 KLQGHSAPVLDVSFNCDESLLASSDASGMVIVWRREQ 484

[Close]

BLAST of Lag0009215 vs. ExPASy Swiss-Prot
Match: Q0UNA9 (Protein transport protein SEC13 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA-4574 / FGSC 10173) OX=321614 GN=SEC13 PE=3 SV=1)

HSP 1 Score: 56.6 bits (135), Expect = 5.2e-07
Identity = 25/68 (36.76%), Postives = 39/68 (57.35%), Query Frame = 0


Query: 214 GEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHQFPVIAVAWNHGE--NLLASSDFYGTVI 273
           G  +   S D  +  +++   KHT V  L+GH+ PV  VAW H +  N+LASS + G VI
Sbjct: 28  GRRLATCSSDKTIKIFEVEGDKHTLVETLRGHEGPVWCVAWAHPKYGNILASSSYDGKVI 87

Query: 274 VWKRSKTS 280
           +W+   ++
Sbjct: 88  IWREQSST 95

[Close]

BLAST of Lag0009215 vs. ExPASy TrEMBL
Match: A0A6J1CXS3 (WD repeat-containing protein 13 OS=Momordica charantia OX=3673 GN=LOC111015427 PE=4 SV=1)

HSP 1 Score: 425.2 bits (1092), Expect = 2.0e-115
Identity = 204/216 (94.44%), Postives = 212/216 (98.15%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+SVGNANKEITVFNFSTGR+VTK+VLD EVTSMDHDHTGQLLFCGD +GYVYSVS
Sbjct: 267 VNNNFLSVGNANKEITVFNFSTGRVVTKTVLDGEVTSMDHDHTGQLLFCGDAHGYVYSVS 326

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           MNSHTGALSRSHRQWCSSRRKSPV TVQYRSFSLLARGPVLLTCTQDGNLSFFS+ALEVQ
Sbjct: 327 MNSHTGALSRSHRQWCSSRRKSPVSTVQYRSFSLLARGPVLLTCTQDGNLSFFSVALEVQ 386

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ
Sbjct: 387 GYLTLRCSLKLAPRIHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 446

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GH+FPVIAVAWNHGENLLASSDF+GTVIVWKRSK S
Sbjct: 447 GHRFPVIAVAWNHGENLLASSDFHGTVIVWKRSKMS 482

[Close]

BLAST of Lag0009215 vs. ExPASy TrEMBL
Match: A0A0A0LIV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249890 PE=4 SV=1)

HSP 1 Score: 422.9 bits (1086), Expect = 1.0e-114
Identity = 205/216 (94.91%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+SVGNANKEITVFNFSTGRIVTK VLDSEVTSMDHDHTGQLLFCGD  GYVYSVS
Sbjct: 275 VNNNFLSVGNANKEITVFNFSTGRIVTKLVLDSEVTSMDHDHTGQLLFCGDANGYVYSVS 334

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           MNSHTGAL+R+HRQWCSSRRKSPV TVQYRSFSLLAR PVLLTCTQDGNLSFFSIALEVQ
Sbjct: 335 MNSHTGALTRTHRQWCSSRRKSPVSTVQYRSFSLLARSPVLLTCTQDGNLSFFSIALEVQ 394

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ
Sbjct: 395 GYLTLRCSLKLAPRIHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 454

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GH+FPVI VAWNHGENLLASSDFYGTVIVWKRSKTS
Sbjct: 455 GHRFPVIGVAWNHGENLLASSDFYGTVIVWKRSKTS 490

[Close]

BLAST of Lag0009215 vs. ExPASy TrEMBL
Match: A0A6J1JGR4 (WD repeat-containing protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111484233 PE=4 SV=1)

HSP 1 Score: 422.5 bits (1085), Expect = 1.3e-114
Identity = 205/216 (94.91%), Postives = 209/216 (96.76%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+SVGNANKEITVFNFSTGRIVTK VLDSEVTSMDHDHTGQ+LFCGD  GYVYSVS
Sbjct: 265 VNNNFLSVGNANKEITVFNFSTGRIVTKLVLDSEVTSMDHDHTGQILFCGDGNGYVYSVS 324

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           MNSHTGALSR+HRQWCSSRRKSPV TVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ
Sbjct: 325 MNSHTGALSRAHRQWCSSRRKSPVCTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 384

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ
Sbjct: 385 GYLTLRCSLKLAPRIHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 444

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GHQFPVI VAWNHGENLLASSD YGTVIVWKRSK S
Sbjct: 445 GHQFPVIGVAWNHGENLLASSDLYGTVIVWKRSKIS 480

[Close]

BLAST of Lag0009215 vs. ExPASy TrEMBL
Match: A0A1S3CDQ8 (WD repeat-containing protein 13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499708 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.3e-114
Identity = 204/216 (94.44%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+SVGNANKEITV+NFSTGRIVTK VLDSEVTSMDHDHTGQLLFCGD  GYVYSVS
Sbjct: 270 VNNNFLSVGNANKEITVYNFSTGRIVTKLVLDSEVTSMDHDHTGQLLFCGDANGYVYSVS 329

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           MNSHTGAL+R+HRQWCSSRRKSPV TVQYRSFSLLAR PVLLTCTQDGNLSFFSIALEVQ
Sbjct: 330 MNSHTGALTRTHRQWCSSRRKSPVSTVQYRSFSLLARSPVLLTCTQDGNLSFFSIALEVQ 389

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ
Sbjct: 390 GYLTLRCSLKLAPRIHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 449

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GH+FPVI VAWNHGENLLASSDFYGTVIVWKRSKTS
Sbjct: 450 GHRFPVIGVAWNHGENLLASSDFYGTVIVWKRSKTS 485

[Close]

BLAST of Lag0009215 vs. ExPASy TrEMBL
Match: A0A5D3BWX0 (WD repeat-containing protein 13 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold280G00470 PE=4 SV=1)

HSP 1 Score: 421.8 bits (1083), Expect = 2.3e-114
Identity = 204/216 (94.44%), Postives = 210/216 (97.22%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+SVGNANKEITV+NFSTGRIVTK VLDSEVTSMDHDHTGQLLFCGD  GYVYSVS
Sbjct: 139 VNNNFLSVGNANKEITVYNFSTGRIVTKLVLDSEVTSMDHDHTGQLLFCGDANGYVYSVS 198

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           MNSHTGAL+R+HRQWCSSRRKSPV TVQYRSFSLLAR PVLLTCTQDGNLSFFSIALEVQ
Sbjct: 199 MNSHTGALTRTHRQWCSSRRKSPVSTVQYRSFSLLARSPVLLTCTQDGNLSFFSIALEVQ 258

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+HSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ
Sbjct: 259 GYLTLRCSLKLAPRIHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 318

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GH+FPVI VAWNHGENLLASSDFYGTVIVWKRSKTS
Sbjct: 319 GHRFPVIGVAWNHGENLLASSDFYGTVIVWKRSKTS 354

[Close]

BLAST of Lag0009215 vs. TAIR 10
Match: AT2G16405.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 371.3 bits (952), Expect = 6.7e-103
Identity = 176/216 (81.48%), Postives = 197/216 (91.20%), Query Frame = 0


Query: 64  VNNNFVSVGNANKEITVFNFSTGRIVTKSVLDSEVTSMDHDHTGQLLFCGDKYGYVYSVS 123
           VNNNF+S GNANKE+TVFNFSTGRI+ K + + EVTSMDHDHTGQ++FCGD  G VYSVS
Sbjct: 268 VNNNFLSAGNANKELTVFNFSTGRIIKKLLFEDEVTSMDHDHTGQIIFCGDGQGTVYSVS 327

Query: 124 MNSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQ 183
           M+SHTG+LSRSHR    +  KSPV TV+YRSFSLLA GPVLLTCTQDGNLSFFS+AL+++
Sbjct: 328 MDSHTGSLSRSHRH--RTNHKSPVTTVKYRSFSLLASGPVLLTCTQDGNLSFFSVALQIK 387

Query: 184 GYLTLRCSLKLAPRVHSIRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQ 243
           GYLTLRCSLKLAPR+H I+ASFCPLLSLEKGEYIVAGSEDSNVYFYDLT+PKHTCVNKLQ
Sbjct: 388 GYLTLRCSLKLAPRIHRIQASFCPLLSLEKGEYIVAGSEDSNVYFYDLTKPKHTCVNKLQ 447

Query: 244 GHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSKTS 280
           GH+FPV+ VAWNHGENLLASSDFYG VIVWKR+KTS
Sbjct: 448 GHRFPVMCVAWNHGENLLASSDFYGVVIVWKRAKTS 481

[Close]

BLAST of Lag0009215 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 53.9 bits (128), Expect = 2.4e-07
Identity = 53/215 (24.65%), Postives = 96/215 (44.65%), Query Frame = 0


Query: 66  NNFVSVGNANKEITVFNFSTGRIVTKSVLDSE-VTSMDHDHTGQLLFCGDKYGYVYSVSM 125
           +N +  G+ ++ + +++ +TG+ +      S+ VT++D +  G L+      G       
Sbjct: 125 SNMIVSGSFDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCR--IW 184

Query: 126 NSHTGALSRSHRQWCSSRRKSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQG 185
           +S TG   ++           PV  V++        G  +L  T D  L  ++I+     
Sbjct: 185 DSGTGHCVKT----LIDDENPPVSFVRFS-----PNGKFILVGTLDNTLRLWNIS----- 244

Query: 186 YLTLRCSLKLAPRVHSIRASFC--PLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKL 245
                 +  L      + A +C     S+  G+ IV+GSED+ V+ ++L   K   + KL
Sbjct: 245 -----SAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSEDNCVHMWELNSKK--LLQKL 304

Query: 246 QGHQFPVIAVAWNHGENLLASSDFYGTVIVWKRSK 278
           +GH   V+ VA +  ENL+AS     TV +W + K
Sbjct: 305 EGHTETVMNVACHPTENLIASGSLDKTVRIWTQKK 316

[Close]

BLAST of Lag0009215 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 49.3 bits (116), Expect = 5.9e-06
Identity = 42/137 (30.66%), Postives = 68/137 (49.64%), Query Frame = 0


Query: 144 KSPVLTVQYRSFSLLARGPVLLTCTQDGNLSFFSIALEVQGYLT---LRCSLKLAPRVHS 203
           KSP   V +  FS    G  +L  T D         L++  Y T   L+       +V  
Sbjct: 212 KSP--AVSFAKFS--PNGKFILVATLDS-------TLKLSNYATGKFLKVYTGHTNKVFC 271

Query: 204 IRASFCPLLSLEKGEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHQFPVIAVAWNHGENL 263
           I ++F    S+  G+YIV+GSED+ VY +DL       + +L+GH   VI+V+ +  +N 
Sbjct: 272 ITSAF----SVTNGKYIVSGSEDNCVYLWDL--QARNILQRLEGHTDAVISVSCHPVQNE 331

Query: 264 LASSDFY--GTVIVWKR 276
           ++SS  +   T+ +WK+
Sbjct: 332 ISSSGNHLDKTIRIWKQ 331

[Close]

BLAST of Lag0009215 vs. TAIR 10
Match: AT3G27640.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 46.6 bits (109), Expect = 3.8e-05
Identity = 25/63 (39.68%), Postives = 37/63 (58.73%), Query Frame = 0


Query: 214 GEYIVAGSEDSNVYFYDLTRPKHTCVNKLQGHQFPVIAVAWNH---GENLLASSDFYGTV 273
           GEY+++GS D N Y + + +P+   +  L+GH F V AV W+    G+   AS DF  TV
Sbjct: 350 GEYVLSGSSDGNAYIWQVNKPQVDPI-ILKGHDFEVTAVDWSPSEIGKVATASDDF--TV 409

[Close]

BLAST of Lag0009215 vs. TAIR 10
Match: AT5G43920.1 (transducin family protein / WD-40 repeat family protein )

HSP 1 Score: 42.0 bits (97), Expect = 9.4e-04
Identity = 23/63 (36.51%), Postives = 33/63 (52.38%), Query Frame = 0


Query: 216 YIVAGSEDSNVYFYDLTRPKHTCVNKLQGHQFPVIAVAWN-HGENLLASSDFYGTVIVWK 275
           +I +GSEDS VY ++L   K   +  L GH   V  V+WN     +LAS+    T+ +W 
Sbjct: 457 FIASGSEDSQVYIWNLKNTKP--LEVLSGHSMTVNCVSWNPKNPRMLASASDDQTIRIWG 516

Query: 276 RSK 278
             K
Sbjct: 517 PGK 517

The following BLAST results are available for this feature:

BLAST of Lag0009215 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022146138.1	4.2e-115	94.44	WD repeat-containing protein 13 [Momordica charantia]	[more]
XP_004150062.1	2.1e-114	94.91	WD repeat-containing protein 13 isoform X1 [Cucumis sativus] >XP_031737023.1 WD ...	[more]
XP_011649251.1	2.1e-114	94.91	WD repeat-containing protein 13 isoform X2 [Cucumis sativus] >KGN61888.2 hypothe...	[more]
XP_022986518.1	2.7e-114	94.91	WD repeat-containing protein 13 [Cucurbita maxima]	[more]
TYK02639.1	4.7e-114	94.44	WD repeat-containing protein 13 isoform X2 [Cucumis melo var. makuwa]	[more]

BLAST of Lag0009215 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9H1Z4	9.4e-33	40.09	WD repeat-containing protein 13 OS=Homo sapiens OX=9606 GN=WDR13 PE=1 SV=2	[more]
Q91V09	2.7e-32	40.09	WD repeat-containing protein 13 OS=Mus musculus OX=10090 GN=Wdr13 PE=1 SV=1	[more]
Q6DKP5	2.7e-32	40.09	WD repeat-containing protein 13 OS=Pan troglodytes OX=9598 GN=WDR13 PE=3 SV=1	[more]
Q5RF24	2.7e-32	40.09	WD repeat-containing protein 13 OS=Pongo abelii OX=9601 GN=WDR13 PE=2 SV=1	[more]
Q0UNA9	5.2e-07	36.76	Protein transport protein SEC13 OS=Phaeosphaeria nodorum (strain SN15 / ATCC MYA...	[more]

BLAST of Lag0009215 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CXS3	2.0e-115	94.44	WD repeat-containing protein 13 OS=Momordica charantia OX=3673 GN=LOC111015427 P...	[more]
A0A0A0LIV0	1.0e-114	94.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G249890 PE=4 SV=1	[more]
A0A6J1JGR4	1.3e-114	94.91	WD repeat-containing protein 13 OS=Cucurbita maxima OX=3661 GN=LOC111484233 PE=4...	[more]
A0A1S3CDQ8	2.3e-114	94.44	WD repeat-containing protein 13 isoform X2 OS=Cucumis melo OX=3656 GN=LOC1034997...	[more]
A0A5D3BWX0	2.3e-114	94.44	WD repeat-containing protein 13 isoform X2 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of Lag0009215 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G16405.1	6.7e-103	81.48	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	2.4e-07	24.65	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	5.9e-06	30.66	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G27640.1	3.8e-05	39.68	Transducin/WD40 repeat-like superfamily protein	[more]
AT5G43920.1	9.4e-04	36.51	transducin family protein / WD-40 repeat family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 194..230 e-value: 72.0 score: 5.3 coord: 235..274 e-value: 1.6E-5 score: 34.4
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 238..274 e-value: 0.001 score: 19.9
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 242..279 score: 10.508451
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 28..180 e-value: 2.2E-7 score: 32.1
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 197..279 e-value: 8.1E-15 score: 56.7
None	No IPR available	PANTHER	PTHR22838:SF4	WD REPEAT-CONTAINING PROTEIN 13	coord: 64..278
None	No IPR available	PANTHER	PTHR22838	WD REPEAT PROTEIN 26-RELATED	coord: 64..278
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 242..279 score: 10.15287
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 60..275

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0009215.1	Lag0009215.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
molecular_function	GO:1990841	promoter-specific chromatin binding
molecular_function	GO:0005515	protein binding