Lag0009071 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0009071
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	extensin-like isoform X3
Location	chr9: 35019997 .. 35020713 (-)
RNA-Seq Expression	Lag0009071
Synteny	Lag0009071

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAAAGCTTCGCCAACTGTGATCTTGGAAGGGCCAAAATGCTAGCAAATTCAACACAAGGAAGTGGGGATGGGTTTGAGTTTGTGCTCAAACAACAAAATCCCTACTACTTTGCATGTGGAGAAGGCAATGGCTTCCATTGCAACGGTGGATCCATGAAGTTCTCCATAACACCAACATCACGACGTCTGCCGTCACCGCCACCATCACCACCGTCATTACCATCGCCGCTGCCAATATCACCATCGCCACCTCCGTCACCGACTCCATCAAGTCCAAGAAAGATCATAGTGGGTGGTTCTGAACATTGGCGCCTTGCGGTCGACTATAACGATTGGGCGCTTAAGAACGGTCCCTTTTATGTAAACGATATTCTAGGTAAGCTTATTCAGTTCAGTTTGATCCTCATAATGAAAGAATTTCGTTCCCAAACTTACTGGAAGTTATATTTTTTTGCAGTGTTCAAATACGATCCTCCAAACAGTTCGACAGTTCCTCACAATGTTTATTTGCTACCAAACATGCGGAGCTTCGTGAACTGTGATTTTAGAAGGGCGAAAATGGTGGCAAGTTTAACACAAGGGAGTGGAGATGGGTTTGAGTTTGAGCTCAAACAGAAAAATCCTTACTACTTTGCCTGTGGTGAAGGCAATGGCTTCCATTGCAAAACTGGATCCATGAAGTTCTCTGTTACACCAATAATGGTTCAGAGTTGA

mRNA sequence

ATGCAAAGCTTCGCCAACTGTGATCTTGGAAGGGCCAAAATGCTAGCAAATTCAACACAAGGAAGTGGGGATGGGTTTGAGTTTGTGCTCAAACAACAAAATCCCTACTACTTTGCATGTGGAGAAGGCAATGGCTTCCATTGCAACGGTGGATCCATGAAGTTCTCCATAACACCAACATCACGACGTCTGCCGTCACCGCCACCATCACCACCGTCATTACCATCGCCGCTGCCAATATCACCATCGCCACCTCCGTCACCGACTCCATCAAGTCCAAGAAAGATCATAGTGGGTGGTTCTGAACATTGGCGCCTTGCGGTCGACTATAACGATTGGGCGCTTAAGAACGGTCCCTTTTATGTAAACGATATTCTAGTGTTCAAATACGATCCTCCAAACAGTTCGACAGTTCCTCACAATGTTTATTTGCTACCAAACATGCGGAGCTTCGTGAACTGTGATTTTAGAAGGGCGAAAATGGTGGCAAGTTTAACACAAGGGAGTGGAGATGGGTTTGAGTTTGAGCTCAAACAGAAAAATCCTTACTACTTTGCCTGTGGTGAAGGCAATGGCTTCCATTGCAAAACTGGATCCATGAAGTTCTCTGTTACACCAATAATGGTTCAGAGTTGA

Coding sequence (CDS)

ATGCAAAGCTTCGCCAACTGTGATCTTGGAAGGGCCAAAATGCTAGCAAATTCAACACAAGGAAGTGGGGATGGGTTTGAGTTTGTGCTCAAACAACAAAATCCCTACTACTTTGCATGTGGAGAAGGCAATGGCTTCCATTGCAACGGTGGATCCATGAAGTTCTCCATAACACCAACATCACGACGTCTGCCGTCACCGCCACCATCACCACCGTCATTACCATCGCCGCTGCCAATATCACCATCGCCACCTCCGTCACCGACTCCATCAAGTCCAAGAAAGATCATAGTGGGTGGTTCTGAACATTGGCGCCTTGCGGTCGACTATAACGATTGGGCGCTTAAGAACGGTCCCTTTTATGTAAACGATATTCTAGTGTTCAAATACGATCCTCCAAACAGTTCGACAGTTCCTCACAATGTTTATTTGCTACCAAACATGCGGAGCTTCGTGAACTGTGATTTTAGAAGGGCGAAAATGGTGGCAAGTTTAACACAAGGGAGTGGAGATGGGTTTGAGTTTGAGCTCAAACAGAAAAATCCTTACTACTTTGCCTGTGGTGAAGGCAATGGCTTCCATTGCAAAACTGGATCCATGAAGTTCTCTGTTACACCAATAATGGTTCAGAGTTGA

Protein sequence

MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPTSRRLPSPPPSPPSLPSPLPISPSPPPSPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKYDPPNSSTVPHNVYLLPNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTGSMKFSVTPIMVQS

Homology

[Close]

BLAST of Lag0009071 vs. NCBI nr
Match: XP_023007478.1 (extensin-like isoform X3 [Cucurbita maxima])

HSP 1 Score: 309.7 bits (792), Expect = 2.0e-80
Identity = 164/242 (67.77%), Postives = 173/242 (71.49%), Query Frame = 0


Query: 1   MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPT 60
           MQSF  CD  RAK++AN TQGSG+GF FVLKQQ  YYFACGEG GFHCN GSMKFSITP 
Sbjct: 178 MQSFNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITPQ 237

Query: 61  SRRLPSP-----------------------------------PPSPPSLPSPLPISPSPP 120
           SRRLPSP                                   PPS P  PSP P SPSPP
Sbjct: 238 SRRLPSPLPPSRPPRIPPPRHVPPPSKRPRIPPPRPMPPPLSPPSLPPSPSPSP-SPSPP 297

Query: 121 PSPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKYDPPNSSTVPHNVYLL 180
           PSPTP  PRKIIVGGSE WRL  DYNDWALKNGPFY+NDILVFKYDP       H+VYLL
Sbjct: 298 PSPTPQIPRKIIVGGSERWRLGSDYNDWALKNGPFYLNDILVFKYDP------SHSVYLL 357

Query: 181 PNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTGSMKFSVT 208
           PNM+S V+CDF  AKMVA+LTQGSGDGFEF L Q+NPYYFACGEGNGFHCK GSMKFSVT
Sbjct: 358 PNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLGSMKFSVT 412

[Close]

BLAST of Lag0009071 vs. NCBI nr
Match: XP_022947109.1 (extensin-like isoform X4 [Cucurbita moschata])

HSP 1 Score: 308.5 bits (789), Expect = 4.4e-80
Identity = 165/242 (68.18%), Postives = 174/242 (71.90%), Query Frame = 0


Query: 1   MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPT 60
           MQS   CD  RAK++AN TQGSG+GF FVLKQQ  YYFACGEGNGFHCN GSMKFSITP 
Sbjct: 187 MQSLNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGNGFHCNLGSMKFSITPQ 246

Query: 61  SRRLPSPPP--------------------------------SPPSL---PSPLPISPSPP 120
           SR LPSPPP                                SPPSL   PSP P SPSPP
Sbjct: 247 SRCLPSPPPPSRPPRIPPPRHVPPPSKRPRIPPPRQVPPPLSPPSLPPSPSPSP-SPSPP 306

Query: 121 PSPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKYDPPNSSTVPHNVYLL 180
           PSPTP  PRKIIVGGSE WRL  DYNDWALKNGPFY+NDILVFKYD        H+VYLL
Sbjct: 307 PSPTPQIPRKIIVGGSEQWRLGFDYNDWALKNGPFYLNDILVFKYDR------THSVYLL 366

Query: 181 PNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTGSMKFSVT 208
           PNM+S V+CDF  AKMVA+LTQGSGDGFEF L Q+NPYYFACGEGNGFHCK GSMKFSVT
Sbjct: 367 PNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLGSMKFSVT 421

[Close]

BLAST of Lag0009071 vs. NCBI nr
Match: KAG6605125.1 (hypothetical protein SDJN03_02442, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 305.4 bits (781), Expect = 3.7e-79
Identity = 163/241 (67.63%), Postives = 172/241 (71.37%), Query Frame = 0


Query: 1   MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPT 60
           MQS   CD  RAK++AN TQGSG+GF FVLKQQ  YYFAC EGNGFHCN GSMKFSITP 
Sbjct: 149 MQSLNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACAEGNGFHCNLGSMKFSITPQ 208

Query: 61  SRRLPS---------------------------------PPPSPPSL-PSPLPISPSPPP 120
           SRRLPS                                 PPPSPPSL PSP P SPSPPP
Sbjct: 209 SRRLPSPPPPSRRPRIPPPRQMPPPPSKRPRMPPPRQMPPPPSPPSLPPSPSP-SPSPPP 268

Query: 121 SPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKYDPPNSSTVPHNVYLLP 180
           SPTP  PRKIIVGGSE WRL  DYNDWALKNGPFY+NDILVFKYD        H+VYLLP
Sbjct: 269 SPTPQIPRKIIVGGSEQWRLGFDYNDWALKNGPFYLNDILVFKYDR------THSVYLLP 328

Query: 181 NMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTGSMKFSVTP 208
           NM+S V+CDF  AKMVA+LTQGSGDGFEF L  +NPYYFACGE NGFHCK GSMKFSVTP
Sbjct: 329 NMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNHQNPYYFACGEANGFHCKLGSMKFSVTP 382

[Close]

BLAST of Lag0009071 vs. NCBI nr
Match: XP_022947108.1 (extensin-like isoform X3 [Cucurbita moschata])

HSP 1 Score: 303.9 bits (777), Expect = 1.1e-78
Identity = 164/249 (65.86%), Postives = 173/249 (69.48%), Query Frame = 0


Query: 1   MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPT 60
           MQS   CD  RAK++AN TQGSG+GF FVLKQQ  YYFACGEGNGFHCN GSMKFSITP 
Sbjct: 187 MQSLNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGNGFHCNLGSMKFSITPQ 246

Query: 61  SRRLPSPP---------------------------------------PSPPSL---PSPL 120
           SR LPSPP                                       P PPSL   PSP 
Sbjct: 247 SRCLPSPPPPSRPPRIPPPRHVPPSSPPPPSKRPRIPPPRPMPPQPMPPPPSLPPSPSPS 306

Query: 121 PISPSPPPSPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKYDPPNSSTV 180
           P SPSPPPSPTP  PRKIIVGGSE WRL  DYNDWALKNGPFY+NDILVFKYD       
Sbjct: 307 P-SPSPPPSPTPQIPRKIIVGGSEQWRLGFDYNDWALKNGPFYLNDILVFKYDR------ 366

Query: 181 PHNVYLLPNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTG 208
            H+VYLLPNM+S V+CDF  AKMVA+LTQGSGDGFEF L Q+NPYYFACGEGNGFHCK G
Sbjct: 367 THSVYLLPNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLG 426

[Close]

BLAST of Lag0009071 vs. NCBI nr
Match: XP_023007477.1 (extensin-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 302.4 bits (773), Expect = 3.1e-78
Identity = 164/261 (62.84%), Postives = 175/261 (67.05%), Query Frame = 0


Query: 1   MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPT 60
           MQSF  CD  RAK++AN TQGSG+GF FVLKQQ  YYFACGEG GFHCN GSMKFSITP 
Sbjct: 178 MQSFNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITPQ 237

Query: 61  SRRLPS-------------------------------PPPSP------PSLPSPLPI--- 120
           SRRLPS                               PPPSP      P +P P P+   
Sbjct: 238 SRRLPSPLPPSRPPRIPPPRHVPPPSKRPRIPPPRQVPPPSPPPPSKRPRIPPPRPMPPP 297

Query: 121 --------------SPSPPPSPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDIL 180
                         SPSPPPSPTP  PRKIIVGGSE WRL  DYNDWALKNGPFY+NDIL
Sbjct: 298 LSPPSLPPSPSPSPSPSPPPSPTPQIPRKIIVGGSERWRLGSDYNDWALKNGPFYLNDIL 357

Query: 181 VFKYDPPNSSTVPHNVYLLPNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFA 208
           VFKYDP       H+VYLLPNM+S V+CDF  AKMVA+LTQGSGDGFEF L Q+NPYYFA
Sbjct: 358 VFKYDP------SHSVYLLPNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFA 417

[Close]

BLAST of Lag0009071 vs. ExPASy TrEMBL
Match: A0A6J1L7S6 (extensin-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1)

HSP 1 Score: 309.7 bits (792), Expect = 9.5e-81
Identity = 164/242 (67.77%), Postives = 173/242 (71.49%), Query Frame = 0


Query: 1   MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPT 60
           MQSF  CD  RAK++AN TQGSG+GF FVLKQQ  YYFACGEG GFHCN GSMKFSITP 
Sbjct: 178 MQSFNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITPQ 237

Query: 61  SRRLPSP-----------------------------------PPSPPSLPSPLPISPSPP 120
           SRRLPSP                                   PPS P  PSP P SPSPP
Sbjct: 238 SRRLPSPLPPSRPPRIPPPRHVPPPSKRPRIPPPRPMPPPLSPPSLPPSPSPSP-SPSPP 297

Query: 121 PSPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKYDPPNSSTVPHNVYLL 180
           PSPTP  PRKIIVGGSE WRL  DYNDWALKNGPFY+NDILVFKYDP       H+VYLL
Sbjct: 298 PSPTPQIPRKIIVGGSERWRLGSDYNDWALKNGPFYLNDILVFKYDP------SHSVYLL 357

Query: 181 PNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTGSMKFSVT 208
           PNM+S V+CDF  AKMVA+LTQGSGDGFEF L Q+NPYYFACGEGNGFHCK GSMKFSVT
Sbjct: 358 PNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLGSMKFSVT 412

[Close]

BLAST of Lag0009071 vs. ExPASy TrEMBL
Match: A0A6J1G5T9 (extensin-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)

HSP 1 Score: 308.5 bits (789), Expect = 2.1e-80
Identity = 165/242 (68.18%), Postives = 174/242 (71.90%), Query Frame = 0


Query: 1   MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPT 60
           MQS   CD  RAK++AN TQGSG+GF FVLKQQ  YYFACGEGNGFHCN GSMKFSITP 
Sbjct: 187 MQSLNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGNGFHCNLGSMKFSITPQ 246

Query: 61  SRRLPSPPP--------------------------------SPPSL---PSPLPISPSPP 120
           SR LPSPPP                                SPPSL   PSP P SPSPP
Sbjct: 247 SRCLPSPPPPSRPPRIPPPRHVPPPSKRPRIPPPRQVPPPLSPPSLPPSPSPSP-SPSPP 306

Query: 121 PSPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKYDPPNSSTVPHNVYLL 180
           PSPTP  PRKIIVGGSE WRL  DYNDWALKNGPFY+NDILVFKYD        H+VYLL
Sbjct: 307 PSPTPQIPRKIIVGGSEQWRLGFDYNDWALKNGPFYLNDILVFKYDR------THSVYLL 366

Query: 181 PNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTGSMKFSVT 208
           PNM+S V+CDF  AKMVA+LTQGSGDGFEF L Q+NPYYFACGEGNGFHCK GSMKFSVT
Sbjct: 367 PNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLGSMKFSVT 421

[Close]

BLAST of Lag0009071 vs. ExPASy TrEMBL
Match: A0A6J1G5Q0 (extensin-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)

HSP 1 Score: 303.9 bits (777), Expect = 5.2e-79
Identity = 164/249 (65.86%), Postives = 173/249 (69.48%), Query Frame = 0


Query: 1   MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPT 60
           MQS   CD  RAK++AN TQGSG+GF FVLKQQ  YYFACGEGNGFHCN GSMKFSITP 
Sbjct: 187 MQSLNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGNGFHCNLGSMKFSITPQ 246

Query: 61  SRRLPSPP---------------------------------------PSPPSL---PSPL 120
           SR LPSPP                                       P PPSL   PSP 
Sbjct: 247 SRCLPSPPPPSRPPRIPPPRHVPPSSPPPPSKRPRIPPPRPMPPQPMPPPPSLPPSPSPS 306

Query: 121 PISPSPPPSPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKYDPPNSSTV 180
           P SPSPPPSPTP  PRKIIVGGSE WRL  DYNDWALKNGPFY+NDILVFKYD       
Sbjct: 307 P-SPSPPPSPTPQIPRKIIVGGSEQWRLGFDYNDWALKNGPFYLNDILVFKYDR------ 366

Query: 181 PHNVYLLPNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTG 208
            H+VYLLPNM+S V+CDF  AKMVA+LTQGSGDGFEF L Q+NPYYFACGEGNGFHCK G
Sbjct: 367 THSVYLLPNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFACGEGNGFHCKLG 426

[Close]

BLAST of Lag0009071 vs. ExPASy TrEMBL
Match: A0A6J1KYU0 (extensin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1)

HSP 1 Score: 302.4 bits (773), Expect = 1.5e-78
Identity = 164/261 (62.84%), Postives = 175/261 (67.05%), Query Frame = 0


Query: 1   MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPT 60
           MQSF  CD  RAK++AN TQGSG+GF FVLKQQ  YYFACGEG GFHCN GSMKFSITP 
Sbjct: 178 MQSFNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGIGFHCNIGSMKFSITPQ 237

Query: 61  SRRLPS-------------------------------PPPSP------PSLPSPLPI--- 120
           SRRLPS                               PPPSP      P +P P P+   
Sbjct: 238 SRRLPSPLPPSRPPRIPPPRHVPPPSKRPRIPPPRQVPPPSPPPPSKRPRIPPPRPMPPP 297

Query: 121 --------------SPSPPPSPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDIL 180
                         SPSPPPSPTP  PRKIIVGGSE WRL  DYNDWALKNGPFY+NDIL
Sbjct: 298 LSPPSLPPSPSPSPSPSPPPSPTPQIPRKIIVGGSERWRLGSDYNDWALKNGPFYLNDIL 357

Query: 181 VFKYDPPNSSTVPHNVYLLPNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFA 208
           VFKYDP       H+VYLLPNM+S V+CDF  AKMVA+LTQGSGDGFEF L Q+NPYYFA
Sbjct: 358 VFKYDP------SHSVYLLPNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPYYFA 417

[Close]

BLAST of Lag0009071 vs. ExPASy TrEMBL
Match: A0A6J1G5G3 (extensin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.8e-77
Identity = 164/264 (62.12%), Postives = 173/264 (65.53%), Query Frame = 0


Query: 1   MQSFANCDLGRAKMLANSTQGSGDGFEFVLKQQNPYYFACGEGNGFHCNGGSMKFSITPT 60
           MQS   CD  RAK++AN TQGSG+GF FVLKQQ  YYFACGEGNGFHCN GSMKFSITP 
Sbjct: 187 MQSLNKCDFRRAKLVANLTQGSGNGFNFVLKQQKAYYFACGEGNGFHCNLGSMKFSITPQ 246

Query: 61  SRRLPSPP---------------------------------------------------- 120
           SR LPSPP                                                    
Sbjct: 247 SRCLPSPPPPSRPPRIPPPRHVPPPSKRPRIPPPRQVPPSSPPPPSKRPRIPPPRPMPPQ 306

Query: 121 --PSPPSL---PSPLPISPSPPPSPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVN 180
             P PPSL   PSP P SPSPPPSPTP  PRKIIVGGSE WRL  DYNDWALKNGPFY+N
Sbjct: 307 PMPPPPSLPPSPSPSP-SPSPPPSPTPQIPRKIIVGGSEQWRLGFDYNDWALKNGPFYLN 366

Query: 181 DILVFKYDPPNSSTVPHNVYLLPNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPY 208
           DILVFKYD        H+VYLLPNM+S V+CDF  AKMVA+LTQGSGDGFEF L Q+NPY
Sbjct: 367 DILVFKYDR------THSVYLLPNMQSLVDCDFGTAKMVANLTQGSGDGFEFVLNQQNPY 426

[Close]

BLAST of Lag0009071 vs. TAIR 10
Match: AT2G15780.1 (Cupredoxin superfamily protein )

HSP 1 Score: 150.2 bits (378), Expect = 1.8e-36
Identity = 67/120 (55.83%), Postives = 85/120 (70.83%), Query Frame = 0


Query: 89  TPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKYDPPNSSTVPHNVYLLPNM 148
           T + PRKIIVGG + W    +Y DWA K  PF++NDILVFKY+PP   T  H+VYLLPN 
Sbjct: 137 TYNGPRKIIVGGDKEWTYGFNYADWASKTAPFFLNDILVFKYNPPAPFT--HSVYLLPNP 196

Query: 149 RSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTGSMKFSVTPIM 208
            S+  CD ++ KM+AS  QG+G GFEF LKQ  PYY +CGE +G HC  G+MKF+V P++
Sbjct: 197 SSYEKCDVKKGKMIASPKQGAGKGFEFVLKQMKPYYISCGEHDGAHCSNGTMKFTVMPML 254

[Close]

BLAST of Lag0009071 vs. TAIR 10
Match: AT2G15770.1 (Cupredoxin superfamily protein )

HSP 1 Score: 132.9 bits (333), Expect = 3.1e-31
Identity = 57/117 (48.72%), Postives = 83/117 (70.94%), Query Frame = 0


Query: 92  SPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKYDPPNSSTVPHNVYLLPNMRSF 151
           +P+KIIVGGS+ W+  +DY DWA KN PFYVND+LVFKYD   S+   +NVYL  +  S+
Sbjct: 142 TPKKIIVGGSDGWKKGLDYKDWASKNAPFYVNDVLVFKYD--KSAKRRNNVYLFKDRWSY 201

Query: 152 VNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTGSMKFSVTPIM 209
           +NCD + A+ + S  +GS + F F LK+  PY+FA GE +G +C+  +MKF++ P++
Sbjct: 202 MNCDIKNARKIGSTRKGSEESFNFTLKKIQPYFFASGEHDGDYCRNHNMKFTIFPVL 256

[Close]

BLAST of Lag0009071 vs. TAIR 10
Match: AT4G34300.1 (Cupredoxin superfamily protein )

HSP 1 Score: 85.5 bits (210), Expect = 5.6e-17
Identity = 51/127 (40.16%), Postives = 68/127 (53.54%), Query Frame = 0


Query: 90  PSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKY---DPPNSSTVPH------ 149
           PS  RKI V     W+    Y +W  K+ PFYVND+LVF Y   D   S T  H      
Sbjct: 187 PSLGRKIAV---TVWKNGYGYTEWTAKHAPFYVNDVLVFTYNNNDQTQSKTKHHHDKKKN 246

Query: 150 NVYLLPNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTGSM 208
           +VYLLP+M+SF  C+  R K + +    S  GF+  L++ + YYF  G+ N  +    +M
Sbjct: 247 DVYLLPDMKSFKRCNVARGKKLVARGGSSSRGFKLLLRKVHTYYFVSGDHNDCN---HNM 306

[Close]

BLAST of Lag0009071 vs. TAIR 10
Match: AT4G33930.1 (Cupredoxin superfamily protein )

HSP 1 Score: 84.7 bits (208), Expect = 9.5e-17
Identity = 52/129 (40.31%), Postives = 70/129 (54.26%), Query Frame = 0


Query: 87  SPTPSSPRKIIVGGSEHWRLAVDYNDWALKNGPFYVNDILVFKY--DPPNSSTVPH---- 146
           +P P+  RKI V     W+    Y +W  K+ PFYV+D+LVFKY  D    S   H    
Sbjct: 216 APIPAG-RKIAV---TVWKNGYGYTEWTAKHAPFYVSDVLVFKYNNDDQTQSKTKHRNKK 275

Query: 147 --NVYLLPNMRSFVNCDFRRAKMVASLTQGSGDGFEFELKQKNPYYFACGEGNGFHCKTG 206
             +VYLLP+M+SF  C+  R K + +    S  GF+  L++   YYFA G+ N   C   
Sbjct: 276 KNDVYLLPDMKSFKRCNVARGKKLVARGGSSSRGFKLLLRKVQTYYFASGDHN--EC-NH 335

Query: 207 SMKFSVTPI 208
           +MKFSV PI
Sbjct: 336 NMKFSVHPI 337

The following BLAST results are available for this feature:

BLAST of Lag0009071 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023007478.1	2.0e-80	67.77	extensin-like isoform X3 [Cucurbita maxima]	[more]
XP_022947109.1	4.4e-80	68.18	extensin-like isoform X4 [Cucurbita moschata]	[more]
KAG6605125.1	3.7e-79	67.63	hypothetical protein SDJN03_02442, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022947108.1	1.1e-78	65.86	extensin-like isoform X3 [Cucurbita moschata]	[more]
XP_023007477.1	3.1e-78	62.84	extensin-like isoform X2 [Cucurbita maxima]	[more]

BLAST of Lag0009071 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0009071 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1L7S6	9.5e-81	67.77	extensin-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1	[more]
A0A6J1G5T9	2.1e-80	68.18	extensin-like isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1	[more]
A0A6J1G5Q0	5.2e-79	65.86	extensin-like isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1	[more]
A0A6J1KYU0	1.5e-78	62.84	extensin-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111499957 PE=4 SV=1	[more]
A0A6J1G5G3	2.8e-77	62.12	extensin-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111451078 PE=4 SV=1	[more]

BLAST of Lag0009071 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G15780.1	1.8e-36	55.83	Cupredoxin superfamily protein	[more]
AT2G15770.1	3.1e-31	48.72	Cupredoxin superfamily protein	[more]
AT4G34300.1	5.6e-17	40.16	Cupredoxin superfamily protein	[more]
AT4G33930.1	9.5e-17	40.31	Cupredoxin superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 93..208 e-value: 2.8E-22 score: 81.0
IPR008972	Cupredoxin	GENE3D	2.60.40.420		coord: 1..66 e-value: 1.6E-7 score: 33.3
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 94..206
IPR008972	Cupredoxin	SUPERFAMILY	49503	Cupredoxins	coord: 3..59
IPR003245	Phytocyanin domain	PFAM	PF02298	Cu_bind_like	coord: 106..198 e-value: 7.7E-6 score: 25.8
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 94..208 score: 22.169535
IPR003245	Phytocyanin domain	PROSITE	PS51485	PHYTOCYANIN	coord: 1..61 score: 12.46713
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 57..95
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..92
None	No IPR available	PANTHER	PTHR34052	GLYCINE-RICH PROTEIN-LIKE	coord: 89..208 coord: 1..63
None	No IPR available	PANTHER	PTHR34052:SF1	GLYCINE-RICH PROTEIN-LIKE	coord: 89..208
None	No IPR available	PANTHER	PTHR34052:SF1	GLYCINE-RICH PROTEIN-LIKE	coord: 1..63

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0009071.1	Lag0009071.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0022900	electron transport chain
molecular_function	GO:0009055	electron transfer activity