Lag0008934 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0008934
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrovirus-related Pol polyprotein from transposon RE1
Location	chr9: 32708017 .. 32711370 (-)
RNA-Seq Expression	Lag0008934
Synteny	Lag0008934

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTATCTTCGTCCTCATCTTCGTCAGCAGCAACAGCAGCTGTTGCAGCATCTTCCTCTGCAACAAATATTATCAGTTCTTCATTGGGGCATCCGCTGAGTACGGTTCTTACCGTAAAGCTTGATGATAAGAACTATCTATTGTGGAAAGATATGGTTCTGGCTATTCTTAGAGGTCAGAAAGTTGATATGTATGTCTTGGGGACAAAAGCCCAACCCTCAGAGTTGATTGAGACCACGACTGAGTCAGGTAAGATGTTACTTTCGAATATGCTTTATGAGGAATGGATGACAGTGGATCAGGCGCTTTCTGGCTGGCTGTTTGGCTCGATGTCTCCAGCTATTGCCGCAGATGTGATAAATTTCAAGACATTACGTGAAGTTTGGAAAGCTTTGGAGGAGGTTTATGGCGACACAAGCAAGGCGTGCGTGAATCAGTTCAGAGGTATACTTCAGAATACAAAGAAAGGCTCCATGAAGATGATCGATTACCTGGCGATCATGAAACAAGCATCAGAGAATTTAAAACTTGTCGGTAACCCTGTTTCTCTTGATGATTTAGTGTCCTATGTCCTGGCTGGATTAGATTCTGAGTACATTCCAATTGTGTGTGCGATAGATGATAAAGATTTAAAAACTTGGCAAGAACTTAGCTCGATTCTGATAAATTTTGAAGGAACTTTGGCTCGATATTCCACTCCTACTAATGCTCATTTTGACCTACCTGATTTAGCTACTCATTTAGCTCTTAATAGACAAAGCATGTTCGATAATCAAAGGCAATTTAACCCTAGTAATGGAAATCGAGGGAATGACAATAATTCTGGGAGTTATTATGGTTCTGGAAATGGTCAAATGGGCAACAATCCTACTCAAGGAACTGCAATGGTGGAAATAGAGGAGGAAGAGGTCGAGGGCGCAACAATTTTCAGAGAGGAAATAACAAGTCGACTTGTCAGCTATGCGAGAAATATGGTCATTCTGCTCCAGCGTGCTACATGAGGTTTGAAGAACATTTTAACAATCTGCACGCTTCTGGTAATGGTTCTGTGCAAGGAAACAACTCAAACAATGCCAGTTCTTCGGCTTACATTGCAACCCCAGAAATTCTTCATGATCCAAAGTGGTTGGCTGATAGCGGAGCTACCAACCATGTCACGGCTAATGCAAGGAATCTTGCAGTAAAGATGGACTATAATGGTACGAATTCTCTTACTGTTGGAGATGGATCCAAATTACAAATATCTCATACTGGTGTTAGTTATATGTTCATTCTCCATTGTCTGATTCTGCCCTAGTTTTGAATAATATTCTTCATGTGCCTGAAATTAGAAAGAATTTGATAAGCATTGCTAGTTTGACTGTCGATAATAATGTTGTGGTTGAGTTTCATTCTAACTATTGTGTTGTGAAGGACAAGGCTTCAAAGAAGGTGATGTTGCACGAAATTCTTAGAAACGACCTCTACCAAATCGAGCTTCCTTCAATACAAACTCCAAAGTCTGAAATCAGGTCAACTTCCTTTGCTGGTGTCAAGTCTTTGTCAAATAAGCCTCCTAGTAGATTGAGTCCTATGTTTTTCATGTTGCAAAGTCGAAATCATGTACTGTGCCTTTTCAGTTATGGCATAATCGTTTGGGTCATGCGTCTTCTAAAGTTATCAAAAGTGTCCTAAAGTCCTGTAATGTTTCAACTTTTTTGAATGAAAGTCTTCATTTCTGTGATGCTTGTCAAAAAGGAAAGTCTCATCGCTTACCATTTTCTCGTTCTGTTTCACACACTTGGCAACCACTTGAACTAGTACACTGTGATCTTTGGGGCCCTTCCCCTATTGTATCCATTGTTGGTTATAAATACTACATTAGTTTCGTGGACGATTTCACTAGACTTGCCCACATCTATCCTCTTAAAACTAAAGGGGAGGCATTTTCTTCTTTCTCTCAATACAAACTTTTAGTTGCGAATCGTTTTGAGAAGAAAATTAAAACTCTTCAAACAGATTGGGGGGGTGAGTTTCGATCCTTTACTTCATTTCTTAGAGATAATGGTATTGAGTTTCGTCATTCATGTCCTCACACTAGTCAGCAAAATGGAATAGTTGAGCGTAAGCATAGGCACATTGTTGAAATGGGGTTGACTCTTTTAGCTCAAGCCTCGATGCCTTTAACCTACTGGTGGGAGGCTTTTTCTTCTGCTGTCTACATTATAAATTGCCTCCCTACTCCTATCCTAGGTGATGTTTCTCCATGGGAGCAAGCCTTTCATTATCCCTGTTTAAGGCTTTACCAATCACATAAATTTCAGCATCATAGCACAAAATGTGTCTTTTTGGGTTATAGTCTTGCACACAAAGGTTATAAGTGTTTAAGCTCAAGTGGTCGTCTCTTTATCTCCTGTCATGTTGTGTTTAATGAGTCTGAATTTCCCTTTAAATCTGAATTAGTTCCCTCATCCGGTCCTTCAAATATAGCTCTTGTTCCTCATCATGTTCCGTTTCCTCAACCTAGCCCTGCACCTTCCTTATCTCCACCTCACAATCCTTAATCCGTGTCTCCCGGTGATTCTGTGTGTCAGTCTTCTCCTGTTGCTGAATTCCAGACATCATCACCTACTTTGTCGACTCCTCCTCAAGATCAGTATGTTAGTCCACAACTAAGTGCTCACAGTCCAGAAGGTCATTCTTGTCCTGCATCTGTTATGCCATTATATACCTCATCTATGTTACCAGTTGATGGCTCGTCTGATGGTTCTCCTGAGCTTCCTCTTCAGATATCCACTGCTTTGAACAGTCATCCTATGCAGACTAGAGCGAAAAGTGGAATTTTTAAACAAAAGGACTGGGGTGCATTTCTAGTCAACAGTTCTTTTTCTCCAGAGGTTGAACCTACATCAGTTAAGGAGGCGCTTAAGTCAAGTCAGTGGAAGGCAGCAATGAATGATGAAATAGCAGTTTTAACTCGTAACAAAACATGGACTCTTGTCCCTCTTCTGCCCAACTTAAACTTAATTGGTTCTAAATGGATTTTCAAAGTTAAACGTAAGTCAAACAGCTCGTTTGATCGTTGTAAGGCCAGATTGGTTGCTCAAGGATTCAATCAAGTTCCAGGAGTTGATTTTCATGAGACGTTTAGTCCAGTGGTTAAAGCTCCAACGATTCAAATCATACTTGCTGTGGCGGTTATGAAAAATTGGTCCATTCGTCAGTTGGATGTCAATAACATTTTTCTCAATGGCAGGTTGCAAGAAGCTGTTTACATGAGGCAACTGACTGGATATATTGATCAGTCTTGTCCTGATTATGTGTGTAAGCTTGATAAAGCTTTGTATGGTCTTCGACAAGCTTCTCGGGCCTAG

mRNA sequence

ATGTTATCTTCGTCCTCATCTTCGTCAGCAGCAACAGCAGCTGTTGCAGCATCTTCCTCTGCAACAAATATTATCAGTTCTTCATTGGGGCATCCGCTGAGTACGGTTCTTACCGTAAAGCTTGATGATAAGAACTATCTATTGTGGAAAGATATGGTTCTGGCTATTCTTAGAGGTCAGAAAGTTGATATGTATGTCTTGGGGACAAAAGCCCAACCCTCAGAGTTGATTGAGACCACGACTGAGTCAGGTAAGATGTTACTTTCGAATATGCTTTATGAGGAATGGATGACAGTGGATCAGGCGCTTTCTGGCTGGCTGTTTGGCTCGATGTCTCCAGCTATTGCCGCAGATGTGATAAATTTCAAGACATTACGTGAAGTTTGGAAAGCTTTGGAGGAGGTTTATGGCGACACAAGCAAGGCGTGCGTGAATCAGTTCAGAGGTATACTTCAGAATACAAAGAAAGGCTCCATGAAGATGATCGATTACCTGGCGATCATGAAACAAGCATCAGAGAATTTAAAACTTGTCGGTAACCCTGTTTCTCTTGATGATTTAGTGTCCTATGTCCTGGCTGGATTAGATTCTGAGTACATTCCAATTGTGTGTGCGATAGATGATAAAGATTTAAAAACTTGGCAAGAACTTAGCTCGATTCTGATAAATTTTGAAGGAACTTTGGCTCGATATTCCACTCCTACTAATGCTCATTTTGACCTACCTGATTTAGCTACTCATTTAGCTCTTAATAGACAAAGCATGTTCGATAATCAAAGGCAATTTAACCCTAGTAATGGAAATCGAGGGAATGACAATAATTCTGGGAGTTATTATGGTTCTGGAAATGGTCAAATGGGCAACAATCCTACTCAAGGAACTGCAATGGTGGAAATAGAGGAGGAAGAGGTCGAGGGCGCAACAATTTTCAGAGAGGAAATAACAACGTGCTACATGAGGTTTGAAGAACATTTTAACAATCTGCACGCTTCTGGTAATGGTTCTGTGCAAGGAAACAACTCAAACAATGCCAGTTCTTCGGCTTACATTGCAACCCCAGAAATTCTTCATGATCCAAAGTGGTTGGCTGATAGCGGAGCTACCAACCATGTCACGGCTAATGCAAGGAATCTTGCAGTAAAGATGGACTATAATGTTTTGAATAATATTCTTCATGTGCCTGAAATTAGAAAGAATTTGATAAGCATTGCTAGTTTGACTGTCGATAATAATGTTGTGGTTGAGTTTCATTCTAACTATTGTGTTGTGAAGGACAAGGCTTCAAAGAAGGTGATGTTGCACGAAATTCTTAGAAACGACCTCTACCAAATCGAGCTTCCTTCAATACAAACTCCAAAGTCTGAAATCAGGTCAACTTCCTTTGCTGGTTTATGGCATAATCGTTTGGGTCATGCGTCTTCTAAAGTTATCAAAAGTGTCCTAAAGTCCTGTAATGTTTCAACTTTTTTGAATGAAAGTCTTCATTTCTGTGATGCTTGTCAAAAAGGAAAGTCTCATCGCTTACCATTTTCTCGTTCTGTTTCACACACTTGGCAACCACTTGAACTAGTACACTGTGATCTTTGGGGCCCTTCCCCTATTGTATCCATTGTTGGTTATAAATACTACATTAGTTTCGTGGACGATTTCACTAGACTTGCCCACATCTATCCTCTTAAAACTAAAGGGGAGGCATTTTCTTCTTTCTCTCAATACAAACTTTTAGTTGCGAATCGTTTTGAGAAGAAAATTAAAACTCTTCAAACAGATTGGGGGGGTGAGTTTCGATCCTTTACTTCATTTCTTAGAGATAATGGTATTGAGTTTCGTCATTCATGTCCTCACACTAGTCAGCAAAATGGAATAGTTGAGCGTAAGCATAGGCACATTGTTGAAATGGGGTTGACTCTTTTAGCTCAAGCCTCGATGCCTTTAACCTACTGGTGGGAGGCTTTTTCTTCTGCTGTCTACATTATAAATTGCCTCCCTACTCCTATCCTAGGTGATGTTTCTCCATGGGAGCAAGCCTTTCATTATCCCTGTTTAAGGCTTTACCAATCACATAAATTTCAGCATCATAGCACAAAATGTGTCTTTTTGGGTTATAGTCTTGCACACAAAGGTTATAAGTGTTTAAGCTCAAGTGGTCGTCTCTTTATCTCCTGTCATGTTGTGTTTAATGAGTCTGAATTTCCCTTTAAATCTGAATTAGTTCCCTCATCCGGTCCTTCAAATATAGCTCTTGTTCCTCATCATTCTTCTCCTGTTGCTGAATTCCAGACATCATCACCTACTTTGTCGACTCCTCCTCAAGATCAGTATGTTAGTCCACAACTAAGTGCTCACAGTCCAGAAGGTCATTCTTGTCCTGCATCTGTTATGCCATTATATACCTCATCTATGTTACCAGTTGATGGCTCGTCTGATGGTTCTCCTGAGCTTCCTCTTCAGATATCCACTGCTTTGAACAGTCATCCTATGCAGACTAGAGCGAAAAGTGGAATTTTTAAACAAAAGGACTGGGGTGCATTTCTAGTCAACAGTTCTTTTTCTCCAGAGGTTGAACCTACATCAGTTAAGGAGGCGCTTAAGTCAAGTCAGTGGAAGGCAGCAATGAATGATGAAATAGCAGTTTTAACTCGTAACAAAACATGGACTCTTGTCCCTCTTCTGCCCAACTTAAACTTAATTGGTTCTAAATGGATTTTCAAAGTTAAACGTAAGTCAAACAGCTCGTTTGATCGTTGTAAGGCCAGATTGGTTGCTCAAGGATTCAATCAAGTTCCAGGAGTTGATTTTCATGAGACGTTTAGTCCAGTGGTTAAAGCTCCAACGATTCAAATCATACTTGCTGTGGCGGTTATGAAAAATTGGTCCATTCGTCAGTTGGATGTCAATAACATTTTTCTCAATGGCAGGTTGCAAGAAGCTGTTTACATGAGGCAACTGACTGGATATATTGATCAGTCTTGTCCTGATTATGTGTGTAAGCTTGATAAAGCTTTGTATGGTCTTCGACAAGCTTCTCGGGCCTAG

Coding sequence (CDS)

ATGTTATCTTCGTCCTCATCTTCGTCAGCAGCAACAGCAGCTGTTGCAGCATCTTCCTCTGCAACAAATATTATCAGTTCTTCATTGGGGCATCCGCTGAGTACGGTTCTTACCGTAAAGCTTGATGATAAGAACTATCTATTGTGGAAAGATATGGTTCTGGCTATTCTTAGAGGTCAGAAAGTTGATATGTATGTCTTGGGGACAAAAGCCCAACCCTCAGAGTTGATTGAGACCACGACTGAGTCAGGTAAGATGTTACTTTCGAATATGCTTTATGAGGAATGGATGACAGTGGATCAGGCGCTTTCTGGCTGGCTGTTTGGCTCGATGTCTCCAGCTATTGCCGCAGATGTGATAAATTTCAAGACATTACGTGAAGTTTGGAAAGCTTTGGAGGAGGTTTATGGCGACACAAGCAAGGCGTGCGTGAATCAGTTCAGAGGTATACTTCAGAATACAAAGAAAGGCTCCATGAAGATGATCGATTACCTGGCGATCATGAAACAAGCATCAGAGAATTTAAAACTTGTCGGTAACCCTGTTTCTCTTGATGATTTAGTGTCCTATGTCCTGGCTGGATTAGATTCTGAGTACATTCCAATTGTGTGTGCGATAGATGATAAAGATTTAAAAACTTGGCAAGAACTTAGCTCGATTCTGATAAATTTTGAAGGAACTTTGGCTCGATATTCCACTCCTACTAATGCTCATTTTGACCTACCTGATTTAGCTACTCATTTAGCTCTTAATAGACAAAGCATGTTCGATAATCAAAGGCAATTTAACCCTAGTAATGGAAATCGAGGGAATGACAATAATTCTGGGAGTTATTATGGTTCTGGAAATGGTCAAATGGGCAACAATCCTACTCAAGGAACTGCAATGGTGGAAATAGAGGAGGAAGAGGTCGAGGGCGCAACAATTTTCAGAGAGGAAATAACAACGTGCTACATGAGGTTTGAAGAACATTTTAACAATCTGCACGCTTCTGGTAATGGTTCTGTGCAAGGAAACAACTCAAACAATGCCAGTTCTTCGGCTTACATTGCAACCCCAGAAATTCTTCATGATCCAAAGTGGTTGGCTGATAGCGGAGCTACCAACCATGTCACGGCTAATGCAAGGAATCTTGCAGTAAAGATGGACTATAATGTTTTGAATAATATTCTTCATGTGCCTGAAATTAGAAAGAATTTGATAAGCATTGCTAGTTTGACTGTCGATAATAATGTTGTGGTTGAGTTTCATTCTAACTATTGTGTTGTGAAGGACAAGGCTTCAAAGAAGGTGATGTTGCACGAAATTCTTAGAAACGACCTCTACCAAATCGAGCTTCCTTCAATACAAACTCCAAAGTCTGAAATCAGGTCAACTTCCTTTGCTGGTTTATGGCATAATCGTTTGGGTCATGCGTCTTCTAAAGTTATCAAAAGTGTCCTAAAGTCCTGTAATGTTTCAACTTTTTTGAATGAAAGTCTTCATTTCTGTGATGCTTGTCAAAAAGGAAAGTCTCATCGCTTACCATTTTCTCGTTCTGTTTCACACACTTGGCAACCACTTGAACTAGTACACTGTGATCTTTGGGGCCCTTCCCCTATTGTATCCATTGTTGGTTATAAATACTACATTAGTTTCGTGGACGATTTCACTAGACTTGCCCACATCTATCCTCTTAAAACTAAAGGGGAGGCATTTTCTTCTTTCTCTCAATACAAACTTTTAGTTGCGAATCGTTTTGAGAAGAAAATTAAAACTCTTCAAACAGATTGGGGGGGTGAGTTTCGATCCTTTACTTCATTTCTTAGAGATAATGGTATTGAGTTTCGTCATTCATGTCCTCACACTAGTCAGCAAAATGGAATAGTTGAGCGTAAGCATAGGCACATTGTTGAAATGGGGTTGACTCTTTTAGCTCAAGCCTCGATGCCTTTAACCTACTGGTGGGAGGCTTTTTCTTCTGCTGTCTACATTATAAATTGCCTCCCTACTCCTATCCTAGGTGATGTTTCTCCATGGGAGCAAGCCTTTCATTATCCCTGTTTAAGGCTTTACCAATCACATAAATTTCAGCATCATAGCACAAAATGTGTCTTTTTGGGTTATAGTCTTGCACACAAAGGTTATAAGTGTTTAAGCTCAAGTGGTCGTCTCTTTATCTCCTGTCATGTTGTGTTTAATGAGTCTGAATTTCCCTTTAAATCTGAATTAGTTCCCTCATCCGGTCCTTCAAATATAGCTCTTGTTCCTCATCATTCTTCTCCTGTTGCTGAATTCCAGACATCATCACCTACTTTGTCGACTCCTCCTCAAGATCAGTATGTTAGTCCACAACTAAGTGCTCACAGTCCAGAAGGTCATTCTTGTCCTGCATCTGTTATGCCATTATATACCTCATCTATGTTACCAGTTGATGGCTCGTCTGATGGTTCTCCTGAGCTTCCTCTTCAGATATCCACTGCTTTGAACAGTCATCCTATGCAGACTAGAGCGAAAAGTGGAATTTTTAAACAAAAGGACTGGGGTGCATTTCTAGTCAACAGTTCTTTTTCTCCAGAGGTTGAACCTACATCAGTTAAGGAGGCGCTTAAGTCAAGTCAGTGGAAGGCAGCAATGAATGATGAAATAGCAGTTTTAACTCGTAACAAAACATGGACTCTTGTCCCTCTTCTGCCCAACTTAAACTTAATTGGTTCTAAATGGATTTTCAAAGTTAAACGTAAGTCAAACAGCTCGTTTGATCGTTGTAAGGCCAGATTGGTTGCTCAAGGATTCAATCAAGTTCCAGGAGTTGATTTTCATGAGACGTTTAGTCCAGTGGTTAAAGCTCCAACGATTCAAATCATACTTGCTGTGGCGGTTATGAAAAATTGGTCCATTCGTCAGTTGGATGTCAATAACATTTTTCTCAATGGCAGGTTGCAAGAAGCTGTTTACATGAGGCAACTGACTGGATATATTGATCAGTCTTGTCCTGATTATGTGTGTAAGCTTGATAAAGCTTTGTATGGTCTTCGACAAGCTTCTCGGGCCTAG

Protein sequence

MLSSSSSSSAATAAVAASSSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNLAVKMDYNVLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFHYPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA

Homology

[Close]

BLAST of Lag0008934 vs. NCBI nr
Match: GAU51268.1 (hypothetical protein TSUD_412550 [Trifolium subterraneum])

HSP 1 Score: 725.7 bits (1872), Expect = 5.5e-205
Identity = 422/1060 (39.81%), Postives = 601/1060 (56.70%), Query Frame = 0


Query: 19   SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIE 78
            SSA N   S   + L ++++VKLD  NY LWK +VL+++RG K+D Y+LGT   P + + 
Sbjct: 2    SSAAN---SPKKNDLPSIISVKLDRDNYPLWKSLVLSLIRGCKLDGYILGTTECPEQFVT 61

Query: 79   TTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGD 138
            +  +S K+   N  + +W+  DQAL GWL  SM+  IA  +++ +T +++W   + + G 
Sbjct: 62   SADKSKKV---NPDFGDWIANDQALLGWLMNSMAIDIATQLLHCETSKQLWDETQSLAGA 121

Query: 139  TSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSE 198
             +K+ +   +    NT+KG MKM +YL  MK  S+ LKL G+P+S  DL+   L GLD+E
Sbjct: 122  HTKSRITYLKSEFHNTRKGEMKMEEYLIKMKNLSDKLKLAGSPISNSDLMIQTLNGLDAE 181

Query: 199  YIPIVCAIDDKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDN 258
            Y P+V  + D+   +W ++ + L+ FE  L +++             + L LN  + F N
Sbjct: 182  YNPVVVKLSDQINLSWVDVQAQLLAFESRLDQFNN-----------FSGLTLNASANFAN 241

Query: 259  QRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR 318
            + +F      S GN    N  G   G G G+M N   Q   GT  + ++           
Sbjct: 242  KTEFRGNKFNSRGNWRRSNFRGMRGGRGKGRMSNTKCQVCNGTGHIAVD----------- 301

Query: 319  EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHV 378
                 C  RF+  +   + S     QG      S SA+IA+P    D +W  DSGA NHV
Sbjct: 302  -----CSYRFDRPYTGRNYSTEADKQG------SHSAFIASPYHGQDYEWYFDSGANNHV 361

Query: 379  T--------------------ANARNLAV------KMDYNVLNNILHVPEIRKNLISIAS 438
            T                     N   L +      K++   L+++L+VP+I KNL+S++ 
Sbjct: 362  THQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKLNNLNLHDVLYVPQITKNLLSVSK 421

Query: 439  LTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLW 498
            LT DNN++VEF +N C VKDK + + +L   L++ LYQ+      + K      S    W
Sbjct: 422  LTADNNILVEFDANCCSVKDKLTGQTLLKGRLKDGLYQL------SNKEPCVYMSVKESW 481

Query: 499  HNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVH 558
            H +LGH ++KV+  VLK CNV    ++   FC+ACQ GK H LPF  S SH  +PL L+H
Sbjct: 482  HRKLGHPNNKVLDKVLKDCNVKISHSDQFSFCEACQFGKLHLLPFKPSSSHVQEPLALIH 541

Query: 559  CDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK 618
             D+WGP+PI+S  G+KYY+ F+DDF+R   I+PLK K +   +F Q+K L  N+F KKIK
Sbjct: 542  SDVWGPAPILSPSGFKYYVHFIDDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQFNKKIK 601

Query: 619  TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPL 678
             +Q D GGE+++      + GI+FR SCP+TSQQNG  ERKHRH+ E+GLTLLAQA MPL
Sbjct: 602  IIQCDGGGEYKAVQKVSIEAGIQFRMSCPYTSQQNGRAERKHRHVAELGLTLLAQAKMPL 661

Query: 679  TYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLYQSHKF 738
             YWWEAFS+AVY+IN LP+ +  + SP+   F                YPCL+ Y  HK 
Sbjct: 662  RYWWEAFSTAVYLINRLPSSVNPNESPYSLMFKREPDYNALKPFGCACYPCLKPYNQHKL 721

Query: 739  QHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGP------S 798
            Q H+T+CVF+GYS +HKGYKC++S GR+F+S HV+FNE+ FPF    + +  P      +
Sbjct: 722  QFHTTRCVFVGYSNSHKGYKCINSHGRIFVSRHVIFNENHFPFHGGFLDTKNPLKTLTDN 781

Query: 799  NIALVPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPV 858
            +  L+P  S+         P  +T       S + S ++       +S   + T++    
Sbjct: 782  SSILLPTCSAGATTQDAIEPDNNTTSDQNTHSIESSDNNENEEQVDSSEFFVNTNNSSTQ 841

Query: 859  DGSSDGSPELPLQISTAL-------------NSHPMQTRAKSGIFKQKDWGAFLVNSSFS 918
            D  +D S +   + ++ +             N+H M+TR+K GI K K     +  +  S
Sbjct: 842  DIEADNSVDSEDRNNSTMTGTIQQQAQQDNSNTHWMRTRSKDGIHKPKIPYVGMAETD-S 901

Query: 919  PEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNS 978
             E EP SVKEAL    WK AM+ E   L  N TWTLVP     N+I SKWIFK K KS+ 
Sbjct: 902  EEKEPKSVKEALGRPMWKEAMDKEYKALVSNHTWTLVPYQEQENIIDSKWIFKTKYKSDG 961

Query: 979  SFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLN 1012
            S +R KARLVA+GF Q  G+DF ETFSPVVK+ T++IIL +AV  NW +RQLD+NN FLN
Sbjct: 962  SIERRKARLVAKGFQQTAGLDFGETFSPVVKSSTVRIILTIAVHFNWEVRQLDINNAFLN 1015

[Close]

BLAST of Lag0008934 vs. NCBI nr
Match: GAU19483.1 (hypothetical protein TSUD_77270 [Trifolium subterraneum])

HSP 1 Score: 723.0 bits (1865), Expect = 3.5e-204
Identity = 417/1054 (39.56%), Postives = 588/1054 (55.79%), Query Frame = 0


Query: 14   AVAASSSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQP 73
            A AA S+  N + SS        ++VKLD  NY LWK +VL ++RG K+D Y+LGT+  P
Sbjct: 2    ASAAGSNNKNDLPSS--------VSVKLDRNNYPLWKSLVLPVIRGCKLDGYMLGTEGCP 61

Query: 74   SELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALE 133
             E I T+++S K    N  + EW   DQ L GW+  SM+  IA  +++ +T +++W   +
Sbjct: 62   EEFI-TSSDSSKN--KNSAFVEWQANDQRLLGWMLNSMTTEIATQLLHCETSKQLWDEAQ 121

Query: 134  EVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLA 193
             + G  +++ +   +    + +KG MKM DYL  MK   + LKL GNPVS  DL+   L 
Sbjct: 122  SLAGAHTRSQIIYLKSEFHSIRKGEMKMEDYLIKMKNLVDKLKLAGNPVSTSDLIIQTLN 181

Query: 194  GLDSEYIPIVCAIDDKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQ 253
            GLDSEY P+V  + D+   +W +L + L+ FE  + + +  TN   +    AT    NR 
Sbjct: 182  GLDSEYNPVVVKLSDQTTLSWVDLQAQLLTFESRIEQLNNLTNLTLN----ATANVANR- 241

Query: 254  SMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREE 313
                +  +   SN N    N+ G   G G G+ G NP Q                +    
Sbjct: 242  ----SDHRGKSSNNNWRGSNSRGWRGGRGRGKSGKNPCQVCG-------------LSNHI 301

Query: 314  ITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT- 373
               C+ RF++ ++  + S     QG      S +A++A+   + D  W  DSGA+NHVT 
Sbjct: 302  AIDCFHRFDKTYSRSNHSAGHDKQG------SHNAFLASQNSVEDYDWYFDSGASNHVTH 361

Query: 374  -------------------ANARNLAV------KMDYNVLNNILHVPEIRKNLISIASLT 433
                                N   LA+      K+    L++IL+VP I KNL+S++ L 
Sbjct: 362  QTEKFQDLTEHHGKNSLVVGNGEKLAILATGSSKLKSLNLHDILYVPNITKNLLSVSKLA 421

Query: 434  VDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHN 493
             DNN++VEF  N C VKDK + KV+L  +L++ LYQ+      T ++     S    WH 
Sbjct: 422  ADNNILVEFDENCCFVKDKLTGKVILKGLLKDGLYQLS----GTKRNPSAFVSVKESWHR 481

Query: 494  RLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCD 553
            RLGH ++KV+  VL+SC V    +++  FC+ACQ GK H LPF  S SH  +PLELVH D
Sbjct: 482  RLGHPNNKVLDKVLESCKVKVPPSDNFSFCEACQYGKMHLLPFKSSSSHAQEPLELVHTD 541

Query: 554  LWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTL 613
            +WGP+PI++  G+KYY+ FVDDF+R   IYPLK K E   +F Q+K L  N+F K+IK +
Sbjct: 542  VWGPAPIMTSSGFKYYVHFVDDFSRFTWIYPLKQKSETVQAFIQFKNLTENQFNKRIKVI 601

Query: 614  QTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTY 673
            Q D GGE++       + GI+FR SCP+TSQQNG  ERKHRHI E GLTLLAQA MPL Y
Sbjct: 602  QCDGGGEYKPVQKLAVEAGIQFRMSCPYTSQQNGRAERKHRHITEFGLTLLAQAQMPLHY 661

Query: 674  WWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLYQSHKFQH 733
            WWEAFS+AVY+IN LP+ +  + SP+                    YPCL+ Y  HK Q+
Sbjct: 662  WWEAFSTAVYLINRLPSQVTQNESPYSLMLQKEPDYKLLKTFGCACYPCLKPYNQHKLQY 721

Query: 734  HSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL---- 793
            H+T+CVFLGYS +HKGYKCL+S GR+FIS HV+FNE  FPF    + +  P    +    
Sbjct: 722  HTTRCVFLGYSNSHKGYKCLNSHGRIFISRHVIFNEDHFPFHDGFLNTRSPLKTTINVPS 781

Query: 794  -----------VPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLY 853
                       +   S P+ E +  + T +   QD      +++ + + ++ P+     +
Sbjct: 782  TSFPLCTAGNVIDDASMPILEAENPAETNTEDSQD------VNSDTEQTNNGPSEDNTTH 841

Query: 854  TSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPT 913
              ++      S G             SH + TR+KSGI K K      +  ++   +EP 
Sbjct: 842  EETLDITQQQSVGEAS-----QNTNTSHAIHTRSKSGIHKPK-LPYIGLTETYKDTMEPA 901

Query: 914  SVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCK 973
            + KEAL    WK AM  E   L  NKTW LVP     N++ SKW+FK K K + S +R K
Sbjct: 902  NAKEALSRPLWKEAMQKEFEALMSNKTWILVPYQNQENIVDSKWVFKTKYKPDGSLERRK 961

Query: 974  ARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEA 1012
            ARLVA+GF Q  G+D+ ETFSPV+KA T++IIL++AV  NW +RQLD+NN FLNG L+E 
Sbjct: 962  ARLVAKGFQQTAGIDYEETFSPVIKASTVRIILSIAVHLNWEVRQLDINNAFLNGHLKET 1000

[Close]

BLAST of Lag0008934 vs. NCBI nr
Match: PNX94503.1 (putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense])

HSP 1 Score: 712.2 bits (1837), Expect = 6.3e-201
Identity = 417/1048 (39.79%), Postives = 595/1048 (56.77%), Query Frame = 0


Query: 33   LSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNML 92
            L + ++VKLD  N+ LWK +VL ++RG K D Y+LGTK  P + + +   + K+   N  
Sbjct: 12   LPSTVSVKLDRDNFPLWKSLVLPLIRGCKYDGYMLGTKKCPDQFVTSIDNTEKI---NPD 71

Query: 93   YEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQ 152
            Y++W   DQAL GWL  SM+  IA  V++ +T +++W   + + G  +++ +   +    
Sbjct: 72   YQDWQADDQALLGWLMNSMTVDIATQVLHCETSKQLWDEAQSLAGAHTRSRIIYLKSEFH 131

Query: 153  NTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLK 212
            NT K  MKM  YLA MK  ++ LKL G+P+S  DL+   L GLDSEY P+V  + D+   
Sbjct: 132  NTHKREMKMEQYLAKMKNLADKLKLAGSPISSSDLMIQTLNGLDSEYNPVVVKLSDQTNI 191

Query: 213  TWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGND 272
            +W +  + L+ FE  L + +   N +    + + + A   +S      +F    G RG+ 
Sbjct: 192  SWVDFQAQLLAFESRLDQLNNFNNINL---NASANFASKNES---GGNKFGSRGGWRGS- 251

Query: 273  NNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHF--NNLHA 332
            N+ G   G G  +M   P              +    F      CY RF++ +   N +A
Sbjct: 252  NSRGMRGGRGRARMSKPP----------RPICQICGKFGHTAAQCYYRFDKSYTEKNHYA 311

Query: 333  SGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNL------------ 392
             G G          S SA++A+P    D +W  DSGA+NHVT  +  L            
Sbjct: 312  EGEG----------SHSAFVASPYHGQDYEWYFDSGASNHVTHQSGQLQDLNENNGKNSL 371

Query: 393  --------------AVKMDYNVLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVK 452
                          + K++   L N+L+VPEI KNL+S++ LT+DNN +VEF  NYC VK
Sbjct: 372  LVGNGEKLKILASGSTKLNDVNLRNVLYVPEITKNLLSVSKLTIDNNALVEFDENYCYVK 431

Query: 453  DKASKKVMLHEILRNDLYQI----ELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSV 512
            DK + K +L   L++ LYQ+    E P+ + P + I   S   +WH +LGH ++KV++ V
Sbjct: 432  DKLTGKALLKGRLKDGLYQLSANKEPPTNKDPCAYI---SLKEIWHRKLGHPNNKVLEKV 491

Query: 513  LKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGY 572
            LK  NV    ++   FC+ACQ GK H LPF  S SH  +PL+L+H D+WGP+PI+S   +
Sbjct: 492  LKDNNVKISPSDKFTFCEACQFGKLHLLPFKTSSSHAKEPLDLIHTDVWGPAPILSQSNF 551

Query: 573  KYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSFTS 632
            KYY+ F+DDF+R   I+PLK K E   +F+Q+K LV N+F KKIK ++ D GGE++    
Sbjct: 552  KYYVHFLDDFSRFTWIFPLKQKSETIHAFNQFKNLVENQFNKKIKVIRCDGGGEYKPVQK 611

Query: 633  FLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIIN 692
               D+GI+F+ SCP+TSQQNG  ERKHRH+ E+GLTLLAQA MPL+YWWEAFS+AVY+IN
Sbjct: 612  CAIDSGIQFQMSCPYTSQQNGRAERKHRHVTELGLTLLAQAKMPLSYWWEAFSTAVYLIN 671

Query: 693  CLPTPILGDVSPWEQAFH---------------YPCLRLYQSHKFQHHSTKCVFLGYSLA 752
             LP+ +  + SP+   F                YPCL+ Y  HK Q H+T+CVFLGYS +
Sbjct: 672  RLPSSVNPNESPYTLVFKKEPDYTALKPFGCACYPCLKPYNQHKLQFHTTRCVFLGYSNS 731

Query: 753  HKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL------VPHHSSPVAEF 812
            HKGYKC++S GR+F+S HVVFNE+ FPF+   + +  P  +         P   + +   
Sbjct: 732  HKGYKCVNSHGRVFVSRHVVFNENHFPFQEGFLDTRNPIKVVTNDTPIGFPSFPAGITTN 791

Query: 813  QTSSPTLSTPPQ------------DQYVSPQLSAHSPEGH----SCPASVMPLYTSSMLP 872
             T+  T +   Q            DQ V      H+ E +        S       SM  
Sbjct: 792  NTAEATDNIVDQQEPELNDINTVADQSVESDTFEHTDENNFSNGETEDSTEAAGRESMEE 851

Query: 873  VDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEAL 932
            +      +   P Q  T  N+H M+TR+K+G++K K     L   +   + EP SV EAL
Sbjct: 852  ISQPITETNPPPQQDIT--NTHWMRTRSKAGVYKPKLPYIGLTEEAKEGK-EPESVSEAL 911

Query: 933  KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQ 992
               +W  AM+ E   L  NKTWTLVP     N+I SKWIFK K K++ + +R KARLVA+
Sbjct: 912  SIPEWLNAMDAEYKALMNNKTWTLVPFEGQENVISSKWIFKTKYKADGTIERRKARLVAR 971

Query: 993  GFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQL 1012
            GF Q  GVD+ ETFSPVVK+ T++IIL++AV  +W +RQLD+NN FLNG L+E+V+M Q 
Sbjct: 972  GFQQTAGVDYDETFSPVVKSSTVRIILSIAVHLSWEVRQLDINNAFLNGNLKESVFMHQP 1023

[Close]

BLAST of Lag0008934 vs. NCBI nr
Match: PNY01489.1 (copia-like polyprotein, partial [Trifolium pratense])

HSP 1 Score: 684.9 bits (1766), Expect = 1.1e-192
Identity = 412/1041 (39.58%), Postives = 584/1041 (56.10%), Query Frame = 0


Query: 19   SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIE 78
            SSA N   S+  + L ++++VKLD  NY LWK +VL ++RG K D Y+LGTK  P + + 
Sbjct: 2    SSAAN---SNKKNDLPSIISVKLDRDNYPLWKSLVLPLIRGCKFDGYILGTKECPEQFVT 61

Query: 79   TTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGD 138
            +  +S K+   N  +++WM  DQAL GWL  SM+  IA  +++ +T +++W   + + G 
Sbjct: 62   SADKSKKV---NPDFQDWMADDQALLGWLMNSMAIDIATQLLHCETSKQLWDEAQSLAGA 121

Query: 139  TSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSE 198
             +K+ +   +    NT+KG MKM +YL  MK  S+ LKL G+P+S  DL+   L GLD+E
Sbjct: 122  HTKSRIIYLKSEFHNTRKGEMKMEEYLIKMKNLSDKLKLSGSPISNSDLMIQTLNGLDAE 181

Query: 199  YIPIVCAIDDKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDN 258
            Y P+V  + D+   +W ++ + L+ FE  L           D  +  + L LN  + F N
Sbjct: 182  YNPVVVKLSDQINLSWVDVQAQLLAFESRL-----------DQLNNFSGLTLNASANFAN 241

Query: 259  QRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR 318
            + +F      S GN    N  G   G G G+M N   Q   GT    ++           
Sbjct: 242  KTEFRGNKFHSRGNWRRSNFRGMRGGRGKGRMSNTKCQVCSGTGHTAVD----------- 301

Query: 319  EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHV 378
                 C  RF+  +   + S     QG      S SA++A+P    D +W  DSGA+NHV
Sbjct: 302  -----CSYRFDRSYTGRNYSTEADKQG------SHSAFVASPYHGQDYEWYFDSGASNHV 361

Query: 379  T--------------------ANARNLAV------KMDYNVLNNILHVPEIRKNLISIAS 438
            T                     N   L +      K++   L+++L+VP+I KNL+S++ 
Sbjct: 362  THQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKLNTLNLHDVLYVPQITKNLLSVSK 421

Query: 439  LTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLW 498
            LT DNN+ VEF +N C VKDK + + +L   L++ LYQ+   S Q+ K      S    W
Sbjct: 422  LTADNNIFVEFDANCCSVKDKLTGQTLLKGRLKDGLYQLSDVSPQSNKDPCVYMSVKESW 481

Query: 499  HNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVH 558
            H +LGH ++KV++ VLK CNV    ++   FC+ACQ GK H LPF  S SH  +PL L+H
Sbjct: 482  HRKLGHPNNKVLEKVLKDCNVKISPSDQFSFCEACQFGKLHLLPFKSSSSHVQEPLGLIH 541

Query: 559  CDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK 618
             D+WGP+PI+S  G+KYY+ F+DDF+R   I+PLK K +   +F Q+K L  N+F KKIK
Sbjct: 542  SDVWGPAPILSPSGFKYYVHFIDDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQFNKKIK 601

Query: 619  TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPL 678
             +Q D GGE+++      + GI+FR SCP+TSQQNG  ERKHRH+VE+GLTLLAQA MPL
Sbjct: 602  IIQCDGGGEYKAVQKVSIEAGIQFRMSCPYTSQQNGRAERKHRHVVELGLTLLAQAKMPL 661

Query: 679  TYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLYQSHKF 738
             YWWEAFS+AVY+IN L + +  + SP+   F                YPCL+ Y  HK 
Sbjct: 662  RYWWEAFSTAVYLINRLSSSVNPNESPYSLMFKREPDYNALKPFGCACYPCLKPYNQHKL 721

Query: 739  QHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIALVP 798
            Q H+T+CVF+GYS +HKG     + G    S + + N+ +     +   S+  S+     
Sbjct: 722  QFHTTRCVFMGYSNSHKGSTTQDAIG----SDNNIVNDQD-TTNDQNTHSTESSDNNEEE 781

Query: 799  HHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDG 858
            H  +  +   T++ +      D +V  +   +SP                   + G+S  
Sbjct: 782  HADNSESFVNTNNGSTQDIEVDNFVDSE-DRNSP------------------TITGTSQQ 841

Query: 859  SPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKA 918
                  Q +T  N+H ++TR+K+GI K K     +  +  S E EP SVKEAL    WK 
Sbjct: 842  QAH---QDNT--NTHGIRTRSKNGIHKPKLPYVGMTETD-SEEKEPESVKEALDKPMWKE 901

Query: 919  AMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPG 978
            AM+ E   L  N TWTLVP     N+I SKWIFK K KS+ S +R KARLVA+GF Q  G
Sbjct: 902  AMDKEYKALMSNYTWTLVPFQAQENIIDSKWIFKTKYKSDGSIERRKARLVAKGFQQTAG 961

Query: 979  VDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQS 1012
            +DFHETFSPVVK+ T++IIL +AV  NW +RQLD+NN FLNG+L+E V+M Q  GYID +
Sbjct: 962  LDFHETFSPVVKSSTVRIILTIAVHFNWEVRQLDINNAFLNGKLKETVFMHQPEGYIDTT 973

[Close]

BLAST of Lag0008934 vs. NCBI nr
Match: KYP50444.1 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan])

HSP 1 Score: 674.5 bits (1739), Expect = 1.4e-189
Identity = 379/947 (40.02%), Postives = 557/947 (58.82%), Query Frame = 0


Query: 111  MSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQ 170
            M+  +A  +++ +T +++W+  + + G  +++ +   +     T+KG +KM +YL  MK+
Sbjct: 1    MTQEVATQLLHCETSQQIWEDAQSLAGAHTRSRITFLKTEFHRTRKGGLKMEEYLTKMKE 60

Query: 171  ASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLKTWQELSSILINFEGTLAR 230
             +++L L G+ VS  DLV+  LAGLD+EY PIV  + DK+  TW E+ + L+ +E  L +
Sbjct: 61   IADDLALAGSSVSTMDLVTQTLAGLDNEYNPIVVQLSDKEHLTWVEMQAQLLTYENRLEQ 120

Query: 231  YSTPTNAHFDLPDLATHLALNRQSMFDNQR-QFNPSNGNRGNDNNSGSYYGSGNGQMGNN 290
             +  +N       L  + + N  ++  N+R + N   G RG   N G+  G G G+    
Sbjct: 121  INNQSN-------LTLNPSSNISTILYNRRGKSNAFGGGRGGQINRGARGGRGRGR---- 180

Query: 291  PTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAY 350
             T+   + ++  +    A       + CY RF +++   ++    S + +   N + +AY
Sbjct: 181  ATKDRIVCQVCCKPGHAA-------SHCYHRFNKNYIGQNSDEQKS-EKDKEQNYNFNAY 240

Query: 351  IATPEILHDPKWLADSGATNHVT--------------------ANARNLAV------KMD 410
            +A+P  + D  W  DSGA+NHVT                     N  NL +       +D
Sbjct: 241  VASPSTVEDLDWYFDSGASNHVTYDQNKVQEVNENDGKSFLTVGNGANLKIIACGDSSLD 300

Query: 411  YNV----LNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRN 470
                   L +IL+VP+I KNL+SI+ LT DN++ VEFH   C VKDK + +++L   +++
Sbjct: 301  TQQKSLNLKDILYVPKITKNLLSISKLTFDNDIYVEFHDVACFVKDKLTGRILLEGKIKD 360

Query: 471  DLYQIELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDA 530
             LYQ+   S  T K      S    WH +LGH +SKV+  V+K CN+     E+  FC+A
Sbjct: 361  GLYQLPGGSTSTNKRPHVFFSIKETWHRKLGHPNSKVLNEVMKLCNIEASPCENFEFCEA 420

Query: 531  CQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPL 590
            CQ GK+H LPF  SVS   +PL+LVH D+WGP+PI S+ G+KYY+ F+DD++R   IYPL
Sbjct: 421  CQFGKAHNLPFQNSVSCAKEPLDLVHSDVWGPAPISSVSGFKYYVLFLDDWSRFTWIYPL 480

Query: 591  KTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQ 650
            K K + F +F Q++ LV N+F K+IKTLQ D GGEF+S +  L   GI+ R SCP+TS Q
Sbjct: 481  KQKSDVFQAFIQFRNLVENQFNKRIKTLQCDGGGEFKSLSKVLIKTGIQLRESCPYTSAQ 540

Query: 651  NGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH- 710
            NG  ERKHRH+VE GLTLLAQA MPL YWWEAFS+AV++IN LPT ++ + SP++Q F  
Sbjct: 541  NGRAERKHRHVVESGLTLLAQAKMPLHYWWEAFSTAVFLINRLPTQVIKNKSPYQQLFDK 600

Query: 711  --------------YPCLRLYQSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHV 770
                          YPCL+ Y  HK Q H+TKCVFLGYS +HKGYKCL+S+GR+FIS HV
Sbjct: 601  NPDYTAMKTFGCACYPCLKPYNQHKLQFHTTKCVFLGYSGSHKGYKCLNSTGRIFISRHV 660

Query: 771  VFNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSP 830
            VFNE  FPF    + +  P+ I   P  +S +     +   ++   Q  + +   S+++ 
Sbjct: 661  VFNEHHFPFHDGFLNTRKPAEIITDP--TSLLFPISPTGSNVANEEQRLHTNNNSSSNTK 720

Query: 831  EGHSCPASVMPLYTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAF 890
              H    +       + +  +  ++   E  ++   ++N H M TR+K GI K K     
Sbjct: 721  SKHQVEQAENQNTIDATISQNTFANSRIENNIE---SINQHQMTTRSKMGIIKPKKPYVG 780

Query: 891  LVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFK 950
             V  +   E EP +  EAL++ +WK AM  E   L  NKTWTLVP     N+I  KW+FK
Sbjct: 781  AVEKTLE-EQEPETTYEALENPEWKKAMIAEFKALMMNKTWTLVPYQGQKNIIDCKWVFK 840

Query: 951  VKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLD 1010
             K K++ + +R KARLVA+GF Q  G+D+ ETFSPV+KA T++IIL++AV  NW IRQ+D
Sbjct: 841  TKYKADGTIERRKARLVAKGFQQTLGLDYDETFSPVIKAITVRIILSIAVHFNWEIRQMD 900

Query: 1011 VNNIFLNGRLQEAVYMRQLTGYIDQSCPDYVCKLDKALYGLRQASRA 1012
            +NN FLNG L+E V+MRQ  G++D+S P ++CKL KA+YGL+QA R+
Sbjct: 901  INNAFLNGELKETVFMRQPEGFLDKSRPQHICKLTKAIYGLKQAPRS 922

[Close]

BLAST of Lag0008934 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 510.4 bits (1313), Expect = 4.7e-143
Identity = 376/1114 (33.75%), Postives = 535/1114 (48.03%), Query Frame = 0


Query: 40   KLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTV 99
            KL   NYL+W   V A+  G ++  ++ G+   P   I T          N  Y  W   
Sbjct: 25   KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAP----RVNPDYTRWKRQ 84

Query: 100  DQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSM 159
            D+ +   + G++S ++   V    T  ++W+ L ++Y + S   V Q R  L+   KG+ 
Sbjct: 85   DKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRTQLKQWTKGTK 144

Query: 160  KMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDL-KTWQELS 219
             + DY+  +    + L L+G P+  D+ V  VL  L  EY P++  I  KD   T  E+ 
Sbjct: 145  TIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIAAKDTPPTLTEIH 204

Query: 220  SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSN--GNRGNDNNSG 279
              L+N E  +   S+ T     +P  A  ++    +  +N    N +N   NR N+NNS 
Sbjct: 205  ERLLNHESKILAVSSAT----VIPITANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSK 264

Query: 280  SYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHFNNLHASGNGSV 339
             +  S      NN      + + +   V+G +  R    +    F    N+       + 
Sbjct: 265  PWQQSSTNFHPNNNQSKPYLGKCQICGVQGHSAKR---CSQLQHFLSSVNSQQPPSPFTP 324

Query: 340  QGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNLAVKMDYN----------- 399
                +N A  S Y +         WL DSGAT+H+T++  NL++   Y            
Sbjct: 325  WQPRANLALGSPYSSN-------NWLLDSGATHHITSDFNNLSLHQPYTGGDDVMVADGS 384

Query: 400  -------------------VLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDK 459
                                L+NIL+VP I KNLIS+  L   N V VEF      VKD 
Sbjct: 385  TIPISHTGSTSLSTKSRPLNLHNILYVPNIHKNLISVYRLCNANGVSVEFFPASFQVKDL 444

Query: 460  ASKKVMLHEILRNDLYQIELPSIQ------TPKSEIRSTSFAGLWHNRLGHASSKVIKSV 519
             +   +L    +++LY+  + S Q      +P S+   +S    WH RLGH +  ++ SV
Sbjct: 445  NTGVPLLQGKTKDELYEWPIASSQPVSLFASPSSKATHSS----WHARLGHPAPSILNSV 504

Query: 520  LKSCNVSTFLNESLHF--CDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIV 579
            + + ++S  LN S  F  C  C   KS+++PFS+S  ++ +PLE ++ D+W  SPI+S  
Sbjct: 505  ISNYSLSV-LNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEYIYSDVWS-SPILSHD 564

Query: 580  GYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSF 639
             Y+YY+ FVD FTR   +YPLK K +   +F  +K L+ NRF+ +I T  +D GGEF + 
Sbjct: 565  NYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVAL 624

Query: 640  TSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYI 699
              +   +GI    S PHT + NG+ ERKHRHIVE GLTLL+ AS+P TYW  AF+ AVY+
Sbjct: 625  WEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYL 684

Query: 700  INCLPTPILGDVSPWEQAFH---------------YPCLRLYQSHKFQHHSTKCVFLGYS 759
            IN LPTP+L   SP+++ F                YP LR Y  HK    S +CVFLGYS
Sbjct: 685  INRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHKLDDKSRQCVFLGYS 744

Query: 760  LAHKGYKCLS-SSGRLFISCHVVFNESEFPFKSELVPSSG-------------------- 819
            L    Y CL   + RL+IS HV F+E+ FPF + L   S                     
Sbjct: 745  LTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRRESSCVWSPHTTLPT 804

Query: 820  -----PSNIALVPHH-----SSPVAEFQT-----------------SSPTLSTP------ 879
                 P+     PHH     SSP A F+                  SSP  + P      
Sbjct: 805  RTPVLPAPSCSDPHHAATPPSSPSAPFRNSQVSSSNLDSSFSSSFPSSPEPTAPRQNGPQ 864

Query: 880  PQDQYVSPQLSAHSPEGHS--CPASVMPLYTSSMLPVDGSSDGSPELPLQISTA------ 939
            P  Q    Q   HS +  S   P +  P   +  L     S  S   P   +++      
Sbjct: 865  PTTQPTQTQTQTHSSQNTSQNNPTNESPSQLAQSLSTPAQSSSSSPSPTTSASSSSTSPT 924

Query: 940  -----------------------LNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTS 999
                                   LN+H M TRAK+GI K     +  V  S + E EP +
Sbjct: 925  PPSILIHPPPPLAQIVNNNNQAPLNTHSMGTRAKAGIIKPNPKYSLAV--SLAAESEPRT 984

Query: 1000 VKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLP-NLNLIGSKWIFKVKRKSNSSFDRCK 1012
              +ALK  +W+ AM  EI     N TW LVP  P ++ ++G +WIF  K  S+ S +R K
Sbjct: 985  AIQALKDERWRNAMGSEINAQIGNHTWDLVPPPPSHVTIVGCRWIFTKKYNSDGSLNRYK 1044

[Close]

BLAST of Lag0008934 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 490.3 bits (1261), Expect = 5.1e-137
Identity = 370/1132 (32.69%), Postives = 535/1132 (47.26%), Query Frame = 0


Query: 22   TNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTT 81
            TNI++ ++ +        KL   NYL+W   V A+  G ++  ++ G+   P   I T  
Sbjct: 13   TNILNVNMSN------VTKLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDA 72

Query: 82   ESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSK 141
                +   N  Y  W   D+ +   + G++S ++   V    T  ++W+ L ++Y + S 
Sbjct: 73   ----VPRVNPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSY 132

Query: 142  ACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIP 201
              V Q R I +                    + L L+G P+  D+ V  VL  L  +Y P
Sbjct: 133  GHVTQLRFITR-------------------FDQLALLGKPMDHDEQVERVLENLPDDYKP 192

Query: 202  IVCAIDDKDL-KTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQR 261
            ++  I  KD   +  E+   LIN E  L   ++      ++  +  ++  +R +  +  +
Sbjct: 193  VIDQIAAKDTPPSLTEIHERLINRESKLLALNSA-----EVVPITANVVTHRNTNTNRNQ 252

Query: 262  QFNPSNGNRGNDNN-SGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYM 321
                 N N  N+NN S S+  S +G   +N      +   +   V+G +  R        
Sbjct: 253  NNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSAKR---CPQLH 312

Query: 322  RFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNLA 381
            +F+   N   ++   +     +N A +S Y A         WL DSGAT+H+T++  NL+
Sbjct: 313  QFQSTTNQQQSTSPFTPWQPRANLAVNSPYNAN-------NWLLDSGATHHITSDFNNLS 372

Query: 382  VKMDYN------------------------------VLNNILHVPEIRKNLISIASLTVD 441
                Y                                LN +L+VP I KNLIS+  L   
Sbjct: 373  FHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLCNT 432

Query: 442  NNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFA--GLWHN 501
            N V VEF      VKD  +   +L    +++LY+  + S Q         S A    WH+
Sbjct: 433  NRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIASSQAVSMFASPCSKATHSSWHS 492

Query: 502  RLGHASSKVIKSVLKSCNVSTFLNES--LHFCDACQKGKSHRLPFSRSVSHTWQPLELVH 561
            RLGH S  ++ SV+ + ++   LN S  L  C  C   KSH++PFS S   + +PLE ++
Sbjct: 493  RLGHPSLAILNSVISNHSLPV-LNPSHKLLSCSDCFINKSHKVPFSNSTITSSKPLEYIY 552

Query: 562  CDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK 621
             D+W  SPI+SI  Y+YY+ FVD FTR   +YPLK K +   +F  +K LV NRF+ +I 
Sbjct: 553  SDVWS-SPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTRIG 612

Query: 622  TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPL 681
            TL +D GGEF     +L  +GI    S PHT + NG+ ERKHRHIVEMGLTLL+ AS+P 
Sbjct: 613  TLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASVPK 672

Query: 682  TYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLYQSHKF 741
            TYW  AFS AVY+IN LPTP+L   SP+++ F                YP LR Y  HK 
Sbjct: 673  TYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRHKL 732

Query: 742  QHHSTKCVFLGYSLAHKGYKCLS-SSGRLFISCHVVFNESEFPFK--------------- 801
            +  S +C F+GYSL    Y CL   +GRL+ S HV F+E  FPF                
Sbjct: 733  EDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQRSD 792

Query: 802  -------------SELV----------------PSSGPSNIALVPHHSSPVAEFQTSSPT 861
                         + LV                P S PS +      SS +     SSP+
Sbjct: 793  SAPNWPSHTTLPTTPLVLPAPPCLGPHLDTSPRPPSSPSPLCTTQVSSSNLPSSSISSPS 852

Query: 862  LSTPPQDQYVSPQLSA--------------------HSPEGHSCPASVMPL----YTSSM 921
             S P    +  PQ +A                    +SP  +S P    PL     +S  
Sbjct: 853  SSEPTAPSHNGPQPTAQPHQTQNSNSNSPILNNPNPNSPSPNS-PNQNSPLPQSPISSPH 912

Query: 922  LPVDGSSDGSPELPLQISTA---------------------LNSHPMQTRAKSGIFKQKD 981
            +P   +S   P  P   ST+                     +N+H M TRAK GI K   
Sbjct: 913  IPTPSTSISEPNSPSSSSTSTPPLPPVLPAPPIIQVNAQAPVNTHSMATRAKDGIRKPNQ 972

Query: 982  WGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLV-PLLPNLNLIGS 1012
               +   +S +   EP +  +A+K  +W+ AM  EI     N TW LV P  P++ ++G 
Sbjct: 973  --KYSYATSLAANSEPRTAIQAMKDDRWRQAMGSEINAQIGNHTWDLVPPPPPSVTIVGC 1032

[Close]

BLAST of Lag0008934 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 277.7 bits (709), Expect = 5.2e-73
Identity = 259/994 (26.06%), Postives = 425/994 (42.76%), Query Frame = 0


Query: 91   MLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQF--- 150
            M  E+W  +D+  +  +   +S  +  ++I+  T R +W  LE +Y   SK   N+    
Sbjct: 47   MKAEDWADLDERAASAIRLHLSDDVVNNIIDEDTARGIWTRLESLY--MSKTLTNKLYLK 106

Query: 151  RGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAID 210
            + +           + +L +       L  +G  +  +D    +L  L S Y        
Sbjct: 107  KQLYALHMSEGTNFLSHLNVFNGLITQLANLGVKIEEEDKAILLLNSLPSSY-------- 166

Query: 211  DKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNR--QSMFDNQRQFNPS 270
                     L++ +++ + T+           +L D+ + L LN   +   +NQ Q   +
Sbjct: 167  -------DNLATTILHGKTTI-----------ELKDVTSALLLNEKMRKKPENQGQALIT 226

Query: 271  NGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCY-MRFEEH 330
             G   +   S + YG  +G  G +  +                  +  +  CY      H
Sbjct: 227  EGRGRSYQRSSNNYGR-SGARGKSKNRS-----------------KSRVRNCYNCNQPGH 286

Query: 331  F-----NNLHASGNGSVQGNNSNNASSSA--------YIATPEILH----DPKWLADSGA 390
            F     N     G  S Q N+ N A+                E +H    + +W+ D+ A
Sbjct: 287  FKRDCPNPRKGKGETSGQKNDDNTAAMVQNNDNVVLFINEEEECMHLSGPESEWVVDTAA 346

Query: 391  TNHVT---------------------------ANARNLAVKMDYN---VLNNILHVPEIR 450
            ++H T                           A   ++ +K +     VL ++ HVP++R
Sbjct: 347  SHHATPVRDLFCRYVAGDFGTVKMGNTSYSKIAGIGDICIKTNVGCTLVLKDVRHVPDLR 406

Query: 451  KNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIR 510
             NLIS   + +D +    + +N      K S  V+   + R  LY+      Q   +  +
Sbjct: 407  MNLIS--GIALDRDGYESYFANQKWRLTKGS-LVIAKGVARGTLYRTNAEICQGELNAAQ 466

Query: 511  STSFAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHT 570
                  LWH R+GH S K ++ + K   +S     ++  CD C  GK HR+ F  S    
Sbjct: 467  DEISVDLWHKRMGHMSEKGLQILAKKSLISYAKGTTVKPCDYCLFGKQHRVSFQTSSERK 526

Query: 571  WQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVA 630
               L+LV+ D+ GP  I S+ G KY+++F+DD +R   +Y LKTK + F  F ++  LV 
Sbjct: 527  LNILDLVYSDVCGPMEIESMGGNKYFVTFIDDASRKLWVYILKTKDQVFQVFQKFHALVE 586

Query: 631  NRFEKKIKTLQTDWGGEF--RSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGL 690
                +K+K L++D GGE+  R F  +   +GI    + P T Q NG+ ER +R IVE   
Sbjct: 587  RETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGTPQHNGVAERMNRTIVEKVR 646

Query: 691  TLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVSP---W-EQAFHYPCLRLYQSHKFQ 750
            ++L  A +P ++W EA  +A Y+IN  P+  L    P   W  +   Y  L+++    F 
Sbjct: 647  SMLRMAKLPKSFWGEAVQTACYLINRSPSVPLAFEIPERVWTNKEVSYSHLKVFGCRAFA 706

Query: 751  H-----------HSTKCVFLGYSLAHKGYKCLSSSGRLFI-SCHVVFNESEFPFKSELVP 810
            H            S  C+F+GY     GY+      +  I S  VVF ESE    +++  
Sbjct: 707  HVPKEQRTKLDDKSIPCIFIGYGDEEFGYRLWDPVKKKVIRSRDVVFRESEVRTAADM-- 766

Query: 811  SSGPSNIALVPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTS 870
             S      ++P+       F T   T + P   +  + ++S    +    P  V+     
Sbjct: 767  -SEKVKNGIIPN-------FVTIPSTSNNPTSAESTTDEVSEQGEQ----PGEVIE---- 826

Query: 871  SMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSV 930
                 +   +G  E+           P++   +  +  ++      V    S + EP S+
Sbjct: 827  ---QGEQLDEGVEEVEHPTQGEEQHQPLRRSERPRVESRRYPSTEYV--LISDDREPESL 886

Query: 931  KEAL---KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRC 990
            KE L   + +Q   AM +E+  L +N T+ LV L      +  KW+FK+K+  +    R 
Sbjct: 887  KEVLSHPEKNQLMKAMQEEMESLQKNGTYKLVELPKGKRPLKCKWVFKLKKDGDCKLVRY 946

Query: 991  KARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQE 1011
            KARLV +GF Q  G+DF E FSPVVK  +I+ IL++A   +  + QLDV   FL+G L+E
Sbjct: 947  KARLVVKGFEQKKGIDFDEIFSPVVKMTSIRTILSLAASLDLEVEQLDVKTAFLHGDLEE 968

[Close]

BLAST of Lag0008934 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 212.6 bits (540), Expect = 2.0e-53
Identity = 261/1069 (24.42%), Postives = 433/1069 (40.51%), Query Frame = 0


Query: 42   DDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVDQ 101
            D + Y +WK  + A+L  Q V   V G                  L+ N + + W   ++
Sbjct: 12   DGEKYAIWKFRIRALLAEQDVLKVVDG------------------LMPNEVDDSWKKAER 71

Query: 102  ALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGS-MK 161
                 +   +S +      +  T R++ + L+ VY   S A     R  L + K  S M 
Sbjct: 72   CAKSTIIEYLSDSFLNFATSDITARQILENLDAVYERKSLASQLALRKRLLSLKLSSEMS 131

Query: 162  MIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAID--DKDLKTWQELS 221
            ++ +  I  +    L   G  +   D +S++L  L S Y  I+ AI+   ++  T   + 
Sbjct: 132  LLSHFHIFDELISELLAAGAKIEEMDKISHLLITLPSCYDGIITAIETLSEENLTLAFVK 191

Query: 222  SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGNDNNSGSY 281
            + L++ E  +      T+       +  +    + ++F N R   P    +GN       
Sbjct: 192  NRLLDQEIKIKNDHNDTSKKVMNAIVHNNNNTYKNNLFKN-RVTKPKKIFKGNSKYKVKC 251

Query: 282  YGSG-NGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHFNNLHASGN-GSV 341
            +  G  G +  +      ++  + +E E            +M   +  NN     N G V
Sbjct: 252  HHCGREGHIKKDCFHYKRILNNKNKENEKQVQTATSHGIAFM--VKEVNNTSVMDNCGFV 311

Query: 342  QGNNSNN---ASSSAYIATPEILHDPKWLADSGATNHVTANARNLA-VKMDYNV-LNNIL 401
              + +++      S Y  + E++  P  +A +     + A  R +  ++ D+ + L ++L
Sbjct: 312  LDSGASDHLINDESLYTDSVEVV-PPLKIAVAKQGEFIYATKRGIVRLRNDHEITLEDVL 371

Query: 402  HVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQT 461
               E   NL+S+  L  +  + +EF  +   +       V    +L N    + + + Q 
Sbjct: 372  FCKEAAGNLMSVKRLQ-EAGMSIEFDKSGVTISKNGLMVVKNSGMLNN----VPVINFQA 431

Query: 462  PKSEIRSTSFAGLWHNRLGHASSKVI-----KSVLKSCNVSTFLNESLHFCDACQKGKSH 521
                 +  +   LWH R GH S   +     K++    ++   L  S   C+ C  GK  
Sbjct: 432  YSINAKHKNNFRLWHERFGHISDGKLLEIKRKNMFSDQSLLNNLELSCEICEPCLNGKQA 491

Query: 522  RLPFS--RSVSHTWQPLELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGE 581
            RLPF   +  +H  +PL +VH D+ GP   V++    Y++ FVD FT     Y +K K +
Sbjct: 492  RLPFKQLKDKTHIKRPLFVVHSDVCGPITPVTLDDKNYFVIFVDQFTHYCVTYLIKYKSD 551

Query: 582  AFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRS--FTSFLRDNGIEFRHSCPHTSQQNGI 641
             FS F  +       F  K+  L  D G E+ S     F    GI +  + PHT Q NG+
Sbjct: 552  VFSMFQDFVAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYHLTVPHTPQLNGV 611

Query: 642  VERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIINCLPTPILGDVS--PWE----QA 701
             ER  R I E   T+++ A +  ++W EA  +A Y+IN +P+  L D S  P+E    + 
Sbjct: 612  SERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSRALVDSSKTPYEMWHNKK 671

Query: 702  FHYPCLRLY----------QSHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVV- 761
             +   LR++          +  KF   S K +F+GY     G+K   +    FI    V 
Sbjct: 672  PYLKHLRVFGATVYVHIKNKQGKFDDKSFKSIFVGYE--PNGFKLWDAVNEKFIVARDVV 731

Query: 762  ------FNESEFPFKSELVPSSGPSNIALVPHHSSPVAEFQTSSPTLSTP---------- 821
                   N     F++  +  S  S     P+ S  +   QT  P  S            
Sbjct: 732  VDETNMVNSRAVKFETVFLKDSKESENKNFPNDSRKI--IQTEFPNESKECDNIQFLKDS 791

Query: 822  --------PQD--QYVSPQLSAHSPE-------GHSCPASVMPLYTSSMLPVD-----GS 881
                    P D  + +  +    S E         S  ++   L  S     D       
Sbjct: 792  KESENKNFPNDSRKIIQTEFPNESKECDNIQFLKDSKESNKYFLNESKKRKRDDHLNESK 851

Query: 882  SDGSPELPLQISTA-------------------LNSHPMQTRAKSGI-FKQKD--WGAFL 941
              G+P    +  TA                   +N    + + K  I + ++D      +
Sbjct: 852  GSGNPNESRESETAEHLKEIGIDNPTKNDGIEIINRRSERLKTKPQISYNEEDNSLNKVV 911

Query: 942  VNSSFSPEVEPTSVKEAL---KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWI 1001
            +N+       P S  E       S W+ A+N E+     N TWT+     N N++ S+W+
Sbjct: 912  LNAHTIFNDVPNSFDEIQYRDDKSSWEEAINTELNAHKINNTWTITKRPENKNIVDSRWV 971

Query: 1002 FKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQ 1011
            F VK     +  R KARLVA+GF Q   +D+ ETF+PV +  + + IL++ +  N  + Q
Sbjct: 972  FSVKYNELGNPIRYKARLVARGFTQKYQIDYEETFAPVARISSFRFILSLVIQYNLKVHQ 1031

[Close]

BLAST of Lag0008934 vs. ExPASy Swiss-Prot
Match: P92520 (Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 GN=AtMg00820 PE=4 SV=1)

HSP 1 Score: 111.7 bits (278), Expect = 4.9e-23
Identity = 61/127 (48.03%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 827 MQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWT 886
           M TR+K+GI K     +  + ++   + EP SV  ALK   W  AM +E+  L+RNKTW 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTI--KKEPKSVIFALKDPGWCQAMQEELDALSRNKTWI 60

Query: 887 LVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTI 946
           LVP   N N++G KW+FK K  S+ + DR KARLVA+GF+Q  G+ F ET+SPVV+  TI
Sbjct: 61  LVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 120

Query: 947 QIILAVA 954
           + IL VA
Sbjct: 121 RTILNVA 125

[Close]

BLAST of Lag0008934 vs. ExPASy TrEMBL
Match: A0A803PM38 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 737.3 bits (1902), Expect = 8.8e-209
Identity = 450/1083 (41.55%), Postives = 612/1083 (56.51%), Query Frame = 0


Query: 21   ATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETT 80
            A NI+    G  L+    +KLD  N+ LW+ MV AI+RG ++D Y+ GT  +P E + +T
Sbjct: 32   APNIVVPQFGSTLNQPFALKLDRNNFSLWRTMVSAIVRGHRLDGYLKGTLPKPQEFLSST 91

Query: 81   TESGKML---LSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYG 140
               G +      N  +E+W+  DQ L GWL+GSM+  IA +V+   +   +W ALEE++G
Sbjct: 92   DLDGSVSSVGQVNPAFEQWIVNDQLLLGWLYGSMTEGIACEVMGCDSSASLWTALEELFG 151

Query: 141  DTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDS 200
              SKA ++++R  +Q  +KG++ M DYL   +Q ++ L L G P   + LVS VL+GLD 
Sbjct: 152  AHSKAKMDEYRTKIQTARKGALSMADYLRQKRQWADVLALAGEPYPENQLVSNVLSGLDI 211

Query: 201  EYIPIVCAIDDKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFD 260
            EY+P+V  I+ +   TWQ+L  +L++ +  + R  +     F      T + +N  +   
Sbjct: 212  EYLPMVLLIEARGSTTWQQLQDMLLSLDSKMERLHS-----FSGSSKLTGVPMNPSASLA 271

Query: 261  NQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIF-REEITT 320
            N+     +N    N+NN G   G  N +  NN ++G            G T   R     
Sbjct: 272  NKGPHPGANRGNHNNNNRG---GHSNNRGSNNRSRGRG----------GRTSGPRPTCQV 331

Query: 321  C--YMRFEEHFNNLHASGNGSVQGNNSN-----NASSSAYIATPEILHDPKWLADSGATN 380
            C  Y     H  N  AS + + + N  N     N      +A    L     +   G  +
Sbjct: 332  CGKYGHSAAHCYNRGASNHITSEINKMNLKEEYNGKEKVTVANGNRLP----IHHIGLGS 391

Query: 381  HVTANARNLAVKMDYNVLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVKDKASK 440
              T +A  L       +L  ILHVP I KNL+SI+ LT DNNV VEF S+ C VKDK + 
Sbjct: 392  LQTLSASPL-------ILKEILHVPSITKNLLSISKLTSDNNVCVEFLSDLCFVKDKETG 451

Query: 441  KVMLHEILRNDLYQIELPSIQTPKSEIRS----TSFAGL--------------------- 500
            +V+L   L++ LYQ + P+  T  S  RS    TSF+GL                     
Sbjct: 452  QVVLKGKLKDGLYQFDAPTSTTSMSSNRSISCPTSFSGLVVSAVESNVTKPMANQLLCSI 511

Query: 501  ---WHNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPL 560
               WH RLGH S +V+ +VL   NV   +N SL FCDACQ GKSH LPF  +      PL
Sbjct: 512  KDRWHRRLGHPSIRVLDTVLHKINVKN-INSSLSFCDACQLGKSHSLPFKVNPKRATAPL 571

Query: 561  ELVHCDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFE 620
            ELVH D+WGPSPI+S   ++YYI F+DDF+R   IYPLK K EA ++F Q+KLLV N+F 
Sbjct: 572  ELVHTDIWGPSPIMSNTNFRYYIHFIDDFSRYTWIYPLKAKSEALAAFVQFKLLVENQFN 631

Query: 621  KKIKTLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQA 680
             ++K +QTDWGGE++ F  F  D+GI F+H CPHTS QNG  ERKHRHIVEMGLTLLAQA
Sbjct: 632  SRVKRVQTDWGGEYQGFPRFGSDHGIGFQHPCPHTSGQNGRAERKHRHIVEMGLTLLAQA 691

Query: 681  SMPLTYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLYQ 740
             +P  YWW+AF +AVY+IN LPTP+L   +P+E  F                +PCLR YQ
Sbjct: 692  HVPQKYWWDAFQTAVYLINRLPTPVLKLKTPFEVLFKQQPDYKFLKVFGVSCFPCLRAYQ 751

Query: 741  SHKFQHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSN- 800
            +HKFQ HSTKCV LGYS  HKGYKCLSS+GRL+IS  V+FNE EFPFKS  + ++ P   
Sbjct: 752  NHKFQFHSTKCVNLGYSDKHKGYKCLSSTGRLYISRDVIFNEDEFPFKSGFLNTNKPETP 811

Query: 801  -IALVP----------------HHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAH------ 860
               LVP                  SS +   QT      TP   + V P LS        
Sbjct: 812  VSVLVPFWTASSFVNSQSSSQNDFSSSIGNNQTDEVDHGTPTTSRVV-PDLSTFQGNDTD 871

Query: 861  ---SPEGHSCPASVMPL--------YTSSMLPVDGSSDGSPELPLQISTALNSHPMQTRA 920
               S  G+    S + +          S+  P+D S+         +   +++HPM TRA
Sbjct: 872  HVISDFGNIDRISDVQIQQHADTTTLESAADPIDTSASDH-----NLKAVVSTHPMITRA 931

Query: 921  KSGIFKQKDW---GAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLV 980
            K+GIFK K +     ++ NSS     EP S++EAL+   W  AM+ E+  L RN TW LV
Sbjct: 932  KAGIFKPKTYLTQTKWIGNSS-----EPQSIEEALQHKGWNNAMSSEVHALARNGTWKLV 991

Query: 981  PLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQI 1012
            P LP++++I +KW++K KR ++ SF R KARLVA+GF Q PGVDF ETFSPV+KA T++I
Sbjct: 992  PRLPHMHIIDNKWVYKEKRNADGSFQRLKARLVAKGFTQRPGVDFSETFSPVIKASTVRI 1051

[Close]

BLAST of Lag0008934 vs. ExPASy TrEMBL
Match: A0A2Z6P4D5 (Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_412550 PE=4 SV=1)

HSP 1 Score: 725.7 bits (1872), Expect = 2.7e-205
Identity = 422/1060 (39.81%), Postives = 601/1060 (56.70%), Query Frame = 0


Query: 19   SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIE 78
            SSA N   S   + L ++++VKLD  NY LWK +VL+++RG K+D Y+LGT   P + + 
Sbjct: 2    SSAAN---SPKKNDLPSIISVKLDRDNYPLWKSLVLSLIRGCKLDGYILGTTECPEQFVT 61

Query: 79   TTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGD 138
            +  +S K+   N  + +W+  DQAL GWL  SM+  IA  +++ +T +++W   + + G 
Sbjct: 62   SADKSKKV---NPDFGDWIANDQALLGWLMNSMAIDIATQLLHCETSKQLWDETQSLAGA 121

Query: 139  TSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSE 198
             +K+ +   +    NT+KG MKM +YL  MK  S+ LKL G+P+S  DL+   L GLD+E
Sbjct: 122  HTKSRITYLKSEFHNTRKGEMKMEEYLIKMKNLSDKLKLAGSPISNSDLMIQTLNGLDAE 181

Query: 199  YIPIVCAIDDKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDN 258
            Y P+V  + D+   +W ++ + L+ FE  L +++             + L LN  + F N
Sbjct: 182  YNPVVVKLSDQINLSWVDVQAQLLAFESRLDQFNN-----------FSGLTLNASANFAN 241

Query: 259  QRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR 318
            + +F      S GN    N  G   G G G+M N   Q   GT  + ++           
Sbjct: 242  KTEFRGNKFNSRGNWRRSNFRGMRGGRGKGRMSNTKCQVCNGTGHIAVD----------- 301

Query: 319  EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHV 378
                 C  RF+  +   + S     QG      S SA+IA+P    D +W  DSGA NHV
Sbjct: 302  -----CSYRFDRPYTGRNYSTEADKQG------SHSAFIASPYHGQDYEWYFDSGANNHV 361

Query: 379  T--------------------ANARNLAV------KMDYNVLNNILHVPEIRKNLISIAS 438
            T                     N   L +      K++   L+++L+VP+I KNL+S++ 
Sbjct: 362  THQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKLNNLNLHDVLYVPQITKNLLSVSK 421

Query: 439  LTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLW 498
            LT DNN++VEF +N C VKDK + + +L   L++ LYQ+      + K      S    W
Sbjct: 422  LTADNNILVEFDANCCSVKDKLTGQTLLKGRLKDGLYQL------SNKEPCVYMSVKESW 481

Query: 499  HNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVH 558
            H +LGH ++KV+  VLK CNV    ++   FC+ACQ GK H LPF  S SH  +PL L+H
Sbjct: 482  HRKLGHPNNKVLDKVLKDCNVKISHSDQFSFCEACQFGKLHLLPFKPSSSHVQEPLALIH 541

Query: 559  CDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK 618
             D+WGP+PI+S  G+KYY+ F+DDF+R   I+PLK K +   +F Q+K L  N+F KKIK
Sbjct: 542  SDVWGPAPILSPSGFKYYVHFIDDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQFNKKIK 601

Query: 619  TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPL 678
             +Q D GGE+++      + GI+FR SCP+TSQQNG  ERKHRH+ E+GLTLLAQA MPL
Sbjct: 602  IIQCDGGGEYKAVQKVSIEAGIQFRMSCPYTSQQNGRAERKHRHVAELGLTLLAQAKMPL 661

Query: 679  TYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLYQSHKF 738
             YWWEAFS+AVY+IN LP+ +  + SP+   F                YPCL+ Y  HK 
Sbjct: 662  RYWWEAFSTAVYLINRLPSSVNPNESPYSLMFKREPDYNALKPFGCACYPCLKPYNQHKL 721

Query: 739  QHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGP------S 798
            Q H+T+CVF+GYS +HKGYKC++S GR+F+S HV+FNE+ FPF    + +  P      +
Sbjct: 722  QFHTTRCVFVGYSNSHKGYKCINSHGRIFVSRHVIFNENHFPFHGGFLDTKNPLKTLTDN 781

Query: 799  NIALVPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPV 858
            +  L+P  S+         P  +T       S + S ++       +S   + T++    
Sbjct: 782  SSILLPTCSAGATTQDAIEPDNNTTSDQNTHSIESSDNNENEEQVDSSEFFVNTNNSSTQ 841

Query: 859  DGSSDGSPELPLQISTAL-------------NSHPMQTRAKSGIFKQKDWGAFLVNSSFS 918
            D  +D S +   + ++ +             N+H M+TR+K GI K K     +  +  S
Sbjct: 842  DIEADNSVDSEDRNNSTMTGTIQQQAQQDNSNTHWMRTRSKDGIHKPKIPYVGMAETD-S 901

Query: 919  PEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNS 978
             E EP SVKEAL    WK AM+ E   L  N TWTLVP     N+I SKWIFK K KS+ 
Sbjct: 902  EEKEPKSVKEALGRPMWKEAMDKEYKALVSNHTWTLVPYQEQENIIDSKWIFKTKYKSDG 961

Query: 979  SFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLN 1012
            S +R KARLVA+GF Q  G+DF ETFSPVVK+ T++IIL +AV  NW +RQLD+NN FLN
Sbjct: 962  SIERRKARLVAKGFQQTAGLDFGETFSPVVKSSTVRIILTIAVHFNWEVRQLDINNAFLN 1015

[Close]

BLAST of Lag0008934 vs. ExPASy TrEMBL
Match: A0A2Z6MBG6 (Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 GN=TSUD_77270 PE=4 SV=1)

HSP 1 Score: 723.0 bits (1865), Expect = 1.7e-204
Identity = 417/1054 (39.56%), Postives = 588/1054 (55.79%), Query Frame = 0


Query: 14   AVAASSSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQP 73
            A AA S+  N + SS        ++VKLD  NY LWK +VL ++RG K+D Y+LGT+  P
Sbjct: 2    ASAAGSNNKNDLPSS--------VSVKLDRNNYPLWKSLVLPVIRGCKLDGYMLGTEGCP 61

Query: 74   SELIETTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALE 133
             E I T+++S K    N  + EW   DQ L GW+  SM+  IA  +++ +T +++W   +
Sbjct: 62   EEFI-TSSDSSKN--KNSAFVEWQANDQRLLGWMLNSMTTEIATQLLHCETSKQLWDEAQ 121

Query: 134  EVYGDTSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLA 193
             + G  +++ +   +    + +KG MKM DYL  MK   + LKL GNPVS  DL+   L 
Sbjct: 122  SLAGAHTRSQIIYLKSEFHSIRKGEMKMEDYLIKMKNLVDKLKLAGNPVSTSDLIIQTLN 181

Query: 194  GLDSEYIPIVCAIDDKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQ 253
            GLDSEY P+V  + D+   +W +L + L+ FE  + + +  TN   +    AT    NR 
Sbjct: 182  GLDSEYNPVVVKLSDQTTLSWVDLQAQLLTFESRIEQLNNLTNLTLN----ATANVANR- 241

Query: 254  SMFDNQRQFNPSNGNRGNDNNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREE 313
                +  +   SN N    N+ G   G G G+ G NP Q                +    
Sbjct: 242  ----SDHRGKSSNNNWRGSNSRGWRGGRGRGKSGKNPCQVCG-------------LSNHI 301

Query: 314  ITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVT- 373
               C+ RF++ ++  + S     QG      S +A++A+   + D  W  DSGA+NHVT 
Sbjct: 302  AIDCFHRFDKTYSRSNHSAGHDKQG------SHNAFLASQNSVEDYDWYFDSGASNHVTH 361

Query: 374  -------------------ANARNLAV------KMDYNVLNNILHVPEIRKNLISIASLT 433
                                N   LA+      K+    L++IL+VP I KNL+S++ L 
Sbjct: 362  QTEKFQDLTEHHGKNSLVVGNGEKLAILATGSSKLKSLNLHDILYVPNITKNLLSVSKLA 421

Query: 434  VDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLWHN 493
             DNN++VEF  N C VKDK + KV+L  +L++ LYQ+      T ++     S    WH 
Sbjct: 422  ADNNILVEFDENCCFVKDKLTGKVILKGLLKDGLYQLS----GTKRNPSAFVSVKESWHR 481

Query: 494  RLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCD 553
            RLGH ++KV+  VL+SC V    +++  FC+ACQ GK H LPF  S SH  +PLELVH D
Sbjct: 482  RLGHPNNKVLDKVLESCKVKVPPSDNFSFCEACQYGKMHLLPFKSSSSHAQEPLELVHTD 541

Query: 554  LWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTL 613
            +WGP+PI++  G+KYY+ FVDDF+R   IYPLK K E   +F Q+K L  N+F K+IK +
Sbjct: 542  VWGPAPIMTSSGFKYYVHFVDDFSRFTWIYPLKQKSETVQAFIQFKNLTENQFNKRIKVI 601

Query: 614  QTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTY 673
            Q D GGE++       + GI+FR SCP+TSQQNG  ERKHRHI E GLTLLAQA MPL Y
Sbjct: 602  QCDGGGEYKPVQKLAVEAGIQFRMSCPYTSQQNGRAERKHRHITEFGLTLLAQAQMPLHY 661

Query: 674  WWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLYQSHKFQH 733
            WWEAFS+AVY+IN LP+ +  + SP+                    YPCL+ Y  HK Q+
Sbjct: 662  WWEAFSTAVYLINRLPSQVTQNESPYSLMLQKEPDYKLLKTFGCACYPCLKPYNQHKLQY 721

Query: 734  HSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL---- 793
            H+T+CVFLGYS +HKGYKCL+S GR+FIS HV+FNE  FPF    + +  P    +    
Sbjct: 722  HTTRCVFLGYSNSHKGYKCLNSHGRIFISRHVIFNEDHFPFHDGFLNTRSPLKTTINVPS 781

Query: 794  -----------VPHHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLY 853
                       +   S P+ E +  + T +   QD      +++ + + ++ P+     +
Sbjct: 782  TSFPLCTAGNVIDDASMPILEAENPAETNTEDSQD------VNSDTEQTNNGPSEDNTTH 841

Query: 854  TSSMLPVDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPT 913
              ++      S G             SH + TR+KSGI K K      +  ++   +EP 
Sbjct: 842  EETLDITQQQSVGEAS-----QNTNTSHAIHTRSKSGIHKPK-LPYIGLTETYKDTMEPA 901

Query: 914  SVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCK 973
            + KEAL    WK AM  E   L  NKTW LVP     N++ SKW+FK K K + S +R K
Sbjct: 902  NAKEALSRPLWKEAMQKEFEALMSNKTWILVPYQNQENIVDSKWVFKTKYKPDGSLERRK 961

Query: 974  ARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEA 1012
            ARLVA+GF Q  G+D+ ETFSPV+KA T++IIL++AV  NW +RQLD+NN FLNG L+E 
Sbjct: 962  ARLVAKGFQQTAGIDYEETFSPVIKASTVRIILSIAVHLNWEVRQLDINNAFLNGHLKET 1000

[Close]

BLAST of Lag0008934 vs. ExPASy TrEMBL
Match: A0A2K3MUJ9 (Putative retrotransposon Ty1-copia subclass protein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g017679 PE=4 SV=1)

HSP 1 Score: 712.2 bits (1837), Expect = 3.0e-201
Identity = 417/1048 (39.79%), Postives = 595/1048 (56.77%), Query Frame = 0


Query: 33   LSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNML 92
            L + ++VKLD  N+ LWK +VL ++RG K D Y+LGTK  P + + +   + K+   N  
Sbjct: 12   LPSTVSVKLDRDNFPLWKSLVLPLIRGCKYDGYMLGTKKCPDQFVTSIDNTEKI---NPD 71

Query: 93   YEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQ 152
            Y++W   DQAL GWL  SM+  IA  V++ +T +++W   + + G  +++ +   +    
Sbjct: 72   YQDWQADDQALLGWLMNSMTVDIATQVLHCETSKQLWDEAQSLAGAHTRSRIIYLKSEFH 131

Query: 153  NTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKDLK 212
            NT K  MKM  YLA MK  ++ LKL G+P+S  DL+   L GLDSEY P+V  + D+   
Sbjct: 132  NTHKREMKMEQYLAKMKNLADKLKLAGSPISSSDLMIQTLNGLDSEYNPVVVKLSDQTNI 191

Query: 213  TWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDNQRQFNPSNGNRGND 272
            +W +  + L+ FE  L + +   N +    + + + A   +S      +F    G RG+ 
Sbjct: 192  SWVDFQAQLLAFESRLDQLNNFNNINL---NASANFASKNES---GGNKFGSRGGWRGS- 251

Query: 273  NNSGSYYGSGNGQMGNNPTQGTAMVEIEEEEVEGATIFREEITTCYMRFEEHF--NNLHA 332
            N+ G   G G  +M   P              +    F      CY RF++ +   N +A
Sbjct: 252  NSRGMRGGRGRARMSKPP----------RPICQICGKFGHTAAQCYYRFDKSYTEKNHYA 311

Query: 333  SGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHVTANARNL------------ 392
             G G          S SA++A+P    D +W  DSGA+NHVT  +  L            
Sbjct: 312  EGEG----------SHSAFVASPYHGQDYEWYFDSGASNHVTHQSGQLQDLNENNGKNSL 371

Query: 393  --------------AVKMDYNVLNNILHVPEIRKNLISIASLTVDNNVVVEFHSNYCVVK 452
                          + K++   L N+L+VPEI KNL+S++ LT+DNN +VEF  NYC VK
Sbjct: 372  LVGNGEKLKILASGSTKLNDVNLRNVLYVPEITKNLLSVSKLTIDNNALVEFDENYCYVK 431

Query: 453  DKASKKVMLHEILRNDLYQI----ELPSIQTPKSEIRSTSFAGLWHNRLGHASSKVIKSV 512
            DK + K +L   L++ LYQ+    E P+ + P + I   S   +WH +LGH ++KV++ V
Sbjct: 432  DKLTGKALLKGRLKDGLYQLSANKEPPTNKDPCAYI---SLKEIWHRKLGHPNNKVLEKV 491

Query: 513  LKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWGPSPIVSIVGY 572
            LK  NV    ++   FC+ACQ GK H LPF  S SH  +PL+L+H D+WGP+PI+S   +
Sbjct: 492  LKDNNVKISPSDKFTFCEACQFGKLHLLPFKTSSSHAKEPLDLIHTDVWGPAPILSQSNF 551

Query: 573  KYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIKTLQTDWGGEFRSFTS 632
            KYY+ F+DDF+R   I+PLK K E   +F+Q+K LV N+F KKIK ++ D GGE++    
Sbjct: 552  KYYVHFLDDFSRFTWIFPLKQKSETIHAFNQFKNLVENQFNKKIKVIRCDGGGEYKPVQK 611

Query: 633  FLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPLTYWWEAFSSAVYIIN 692
               D+GI+F+ SCP+TSQQNG  ERKHRH+ E+GLTLLAQA MPL+YWWEAFS+AVY+IN
Sbjct: 612  CAIDSGIQFQMSCPYTSQQNGRAERKHRHVTELGLTLLAQAKMPLSYWWEAFSTAVYLIN 671

Query: 693  CLPTPILGDVSPWEQAFH---------------YPCLRLYQSHKFQHHSTKCVFLGYSLA 752
             LP+ +  + SP+   F                YPCL+ Y  HK Q H+T+CVFLGYS +
Sbjct: 672  RLPSSVNPNESPYTLVFKKEPDYTALKPFGCACYPCLKPYNQHKLQFHTTRCVFLGYSNS 731

Query: 753  HKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIAL------VPHHSSPVAEF 812
            HKGYKC++S GR+F+S HVVFNE+ FPF+   + +  P  +         P   + +   
Sbjct: 732  HKGYKCVNSHGRVFVSRHVVFNENHFPFQEGFLDTRNPIKVVTNDTPIGFPSFPAGITTN 791

Query: 813  QTSSPTLSTPPQ------------DQYVSPQLSAHSPEGH----SCPASVMPLYTSSMLP 872
             T+  T +   Q            DQ V      H+ E +        S       SM  
Sbjct: 792  NTAEATDNIVDQQEPELNDINTVADQSVESDTFEHTDENNFSNGETEDSTEAAGRESMEE 851

Query: 873  VDGSSDGSPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEAL 932
            +      +   P Q  T  N+H M+TR+K+G++K K     L   +   + EP SV EAL
Sbjct: 852  ISQPITETNPPPQQDIT--NTHWMRTRSKAGVYKPKLPYIGLTEEAKEGK-EPESVSEAL 911

Query: 933  KSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQ 992
               +W  AM+ E   L  NKTWTLVP     N+I SKWIFK K K++ + +R KARLVA+
Sbjct: 912  SIPEWLNAMDAEYKALMNNKTWTLVPFEGQENVISSKWIFKTKYKADGTIERRKARLVAR 971

Query: 993  GFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQL 1012
            GF Q  GVD+ ETFSPVVK+ T++IIL++AV  +W +RQLD+NN FLNG L+E+V+M Q 
Sbjct: 972  GFQQTAGVDYDETFSPVVKSSTVRIILSIAVHLSWEVRQLDINNAFLNGNLKESVFMHQP 1023

[Close]

BLAST of Lag0008934 vs. ExPASy TrEMBL
Match: A0A2K3NEN7 (Copia-like polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g024786 PE=4 SV=1)

HSP 1 Score: 684.9 bits (1766), Expect = 5.2e-193
Identity = 412/1041 (39.58%), Postives = 584/1041 (56.10%), Query Frame = 0


Query: 19   SSATNIISSSLGHPLSTVLTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIE 78
            SSA N   S+  + L ++++VKLD  NY LWK +VL ++RG K D Y+LGTK  P + + 
Sbjct: 2    SSAAN---SNKKNDLPSIISVKLDRDNYPLWKSLVLPLIRGCKFDGYILGTKECPEQFVT 61

Query: 79   TTTESGKMLLSNMLYEEWMTVDQALSGWLFGSMSPAIAADVINFKTLREVWKALEEVYGD 138
            +  +S K+   N  +++WM  DQAL GWL  SM+  IA  +++ +T +++W   + + G 
Sbjct: 62   SADKSKKV---NPDFQDWMADDQALLGWLMNSMAIDIATQLLHCETSKQLWDEAQSLAGA 121

Query: 139  TSKACVNQFRGILQNTKKGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSE 198
             +K+ +   +    NT+KG MKM +YL  MK  S+ LKL G+P+S  DL+   L GLD+E
Sbjct: 122  HTKSRIIYLKSEFHNTRKGEMKMEEYLIKMKNLSDKLKLSGSPISNSDLMIQTLNGLDAE 181

Query: 199  YIPIVCAIDDKDLKTWQELSSILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDN 258
            Y P+V  + D+   +W ++ + L+ FE  L           D  +  + L LN  + F N
Sbjct: 182  YNPVVVKLSDQINLSWVDVQAQLLAFESRL-----------DQLNNFSGLTLNASANFAN 241

Query: 259  QRQFN----PSNGNRGNDNNSGSYYGSGNGQMGNNPTQ---GTAMVEIEEEEVEGATIFR 318
            + +F      S GN    N  G   G G G+M N   Q   GT    ++           
Sbjct: 242  KTEFRGNKFHSRGNWRRSNFRGMRGGRGKGRMSNTKCQVCSGTGHTAVD----------- 301

Query: 319  EEITTCYMRFEEHFNNLHASGNGSVQGNNSNNASSSAYIATPEILHDPKWLADSGATNHV 378
                 C  RF+  +   + S     QG      S SA++A+P    D +W  DSGA+NHV
Sbjct: 302  -----CSYRFDRSYTGRNYSTEADKQG------SHSAFVASPYHGQDYEWYFDSGASNHV 361

Query: 379  T--------------------ANARNLAV------KMDYNVLNNILHVPEIRKNLISIAS 438
            T                     N   L +      K++   L+++L+VP+I KNL+S++ 
Sbjct: 362  THQTDKFQGFNEHNGKNSLMVGNGEKLKIVASGSTKLNTLNLHDVLYVPQITKNLLSVSK 421

Query: 439  LTVDNNVVVEFHSNYCVVKDKASKKVMLHEILRNDLYQIELPSIQTPKSEIRSTSFAGLW 498
            LT DNN+ VEF +N C VKDK + + +L   L++ LYQ+   S Q+ K      S    W
Sbjct: 422  LTADNNIFVEFDANCCSVKDKLTGQTLLKGRLKDGLYQLSDVSPQSNKDPCVYMSVKESW 481

Query: 499  HNRLGHASSKVIKSVLKSCNVSTFLNESLHFCDACQKGKSHRLPFSRSVSHTWQPLELVH 558
            H +LGH ++KV++ VLK CNV    ++   FC+ACQ GK H LPF  S SH  +PL L+H
Sbjct: 482  HRKLGHPNNKVLEKVLKDCNVKISPSDQFSFCEACQFGKLHLLPFKSSSSHVQEPLGLIH 541

Query: 559  CDLWGPSPIVSIVGYKYYISFVDDFTRLAHIYPLKTKGEAFSSFSQYKLLVANRFEKKIK 618
             D+WGP+PI+S  G+KYY+ F+DDF+R   I+PLK K +   +F Q+K L  N+F KKIK
Sbjct: 542  SDVWGPAPILSPSGFKYYVHFIDDFSRFTWIFPLKQKSDTIHAFIQFKNLAENQFNKKIK 601

Query: 619  TLQTDWGGEFRSFTSFLRDNGIEFRHSCPHTSQQNGIVERKHRHIVEMGLTLLAQASMPL 678
             +Q D GGE+++      + GI+FR SCP+TSQQNG  ERKHRH+VE+GLTLLAQA MPL
Sbjct: 602  IIQCDGGGEYKAVQKVSIEAGIQFRMSCPYTSQQNGRAERKHRHVVELGLTLLAQAKMPL 661

Query: 679  TYWWEAFSSAVYIINCLPTPILGDVSPWEQAFH---------------YPCLRLYQSHKF 738
             YWWEAFS+AVY+IN L + +  + SP+   F                YPCL+ Y  HK 
Sbjct: 662  RYWWEAFSTAVYLINRLSSSVNPNESPYSLMFKREPDYNALKPFGCACYPCLKPYNQHKL 721

Query: 739  QHHSTKCVFLGYSLAHKGYKCLSSSGRLFISCHVVFNESEFPFKSELVPSSGPSNIALVP 798
            Q H+T+CVF+GYS +HKG     + G    S + + N+ +     +   S+  S+     
Sbjct: 722  QFHTTRCVFMGYSNSHKGSTTQDAIG----SDNNIVNDQD-TTNDQNTHSTESSDNNEEE 781

Query: 799  HHSSPVAEFQTSSPTLSTPPQDQYVSPQLSAHSPEGHSCPASVMPLYTSSMLPVDGSSDG 858
            H  +  +   T++ +      D +V  +   +SP                   + G+S  
Sbjct: 782  HADNSESFVNTNNGSTQDIEVDNFVDSE-DRNSP------------------TITGTSQQ 841

Query: 859  SPELPLQISTALNSHPMQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKA 918
                  Q +T  N+H ++TR+K+GI K K     +  +  S E EP SVKEAL    WK 
Sbjct: 842  QAH---QDNT--NTHGIRTRSKNGIHKPKLPYVGMTETD-SEEKEPESVKEALDKPMWKE 901

Query: 919  AMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPG 978
            AM+ E   L  N TWTLVP     N+I SKWIFK K KS+ S +R KARLVA+GF Q  G
Sbjct: 902  AMDKEYKALMSNYTWTLVPFQAQENIIDSKWIFKTKYKSDGSIERRKARLVAKGFQQTAG 961

Query: 979  VDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRLQEAVYMRQLTGYIDQS 1012
            +DFHETFSPVVK+ T++IIL +AV  NW +RQLD+NN FLNG+L+E V+M Q  GYID +
Sbjct: 962  LDFHETFSPVVKSSTVRIILTIAVHFNWEVRQLDINNAFLNGKLKETVFMHQPEGYIDTT 973

[Close]

BLAST of Lag0008934 vs. TAIR 10
Match: AT4G23160.1 (cysteine-rich RLK (RECEPTOR-like protein kinase) 8 )

HSP 1 Score: 148.7 bits (374), Expect = 2.6e-35
Identity = 72/160 (45.00%), Postives = 105/160 (65.62%), Query Frame = 0


Query: 855  EPTSVKEALKSSQWKAAMNDEIAVLTRNKTWTLVPLLPNLNLIGSKWIFKVKRKSNSSFD 914
            EP++  EA +   W  AM+DEI  +    TW +  L PN   IG KW++K+K  S+ + +
Sbjct: 85   EPSTYNEAKEFLVWCGAMDDEIGAMETTHTWEICTLPPNKKPIGCKWVYKIKYNSDGTIE 144

Query: 915  RCKARLVAQGFNQVPGVDFHETFSPVVKAPTIQIILAVAVMKNWSIRQLDVNNIFLNGRL 974
            R KARLVA+G+ Q  G+DF ETFSPV K  ++++ILA++ + N+++ QLD++N FLNG L
Sbjct: 145  RYKARLVAKGYTQQEGIDFIETFSPVCKLTSVKLILAISAIYNFTLHQLDISNAFLNGDL 204

Query: 975  QEAVYMRQLTGYI----DQSCPDYVCKLDKALYGLRQASR 1011
             E +YM+   GY     D   P+ VC L K++YGL+QASR
Sbjct: 205  DEEIYMKLPPGYAARQGDSLPPNAVCYLKKSIYGLKQASR 244

[Close]

BLAST of Lag0008934 vs. TAIR 10
Match: ATMG00820.1 (Reverse transcriptase (RNA-dependent DNA polymerase) )

HSP 1 Score: 111.7 bits (278), Expect = 3.5e-24
Identity = 61/127 (48.03%), Postives = 82/127 (64.57%), Query Frame = 0


Query: 827 MQTRAKSGIFKQKDWGAFLVNSSFSPEVEPTSVKEALKSSQWKAAMNDEIAVLTRNKTWT 886
           M TR+K+GI K     +  + ++   + EP SV  ALK   W  AM +E+  L+RNKTW 
Sbjct: 1   MLTRSKAGINKLNPKYSLTITTTI--KKEPKSVIFALKDPGWCQAMQEELDALSRNKTWI 60

Query: 887 LVPLLPNLNLIGSKWIFKVKRKSNSSFDRCKARLVAQGFNQVPGVDFHETFSPVVKAPTI 946
           LVP   N N++G KW+FK K  S+ + DR KARLVA+GF+Q  G+ F ET+SPVV+  TI
Sbjct: 61  LVPPPVNQNILGCKWVFKTKLHSDGTLDRLKARLVAKGFHQEEGIYFVETYSPVVRTATI 120

Query: 947 QIILAVA 954
           + IL VA
Sbjct: 121 RTILNVA 125

[Close]

BLAST of Lag0008934 vs. TAIR 10
Match: AT5G48050.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G34070.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 67.4 bits (163), Expect = 7.5e-11
Identity = 62/257 (24.12%), Postives = 118/257 (45.91%), Query Frame = 0


Query: 37  LTVKLDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEW 96
           +T+ L+  NY +W+++   +     V  ++ G+ + P+ + E               + W
Sbjct: 24  VTLDLNKLNYDVWRELFETLCLSFGVLGHIDGS-STPTPMTE---------------KRW 83

Query: 97  MTVDQALSGWLFGSMSPAIAADVINFK-TLREVWKALEEVYGDTSKACVNQFRGILQNTK 156
              D  +  W++G+++ ++   +I    T R++W +LE ++ D  +A   QF   L+ T 
Sbjct: 84  KERDGLVKMWIYGTITDSLLDTIIKVGCTARDLWLSLENLFRDNKEARALQFENELRTTT 143

Query: 157 KGSMKMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKD-LKTW 216
              + + +Y   +K  S+ L  V +P+S   LV ++L GL  +Y  I+  I  K    ++
Sbjct: 144 IDDLSVHEYCQKLKSLSDLLTNVDSPISDRVLVMHLLNGLTEKYDYILNVIKHKSPFPSF 203

Query: 217 QELSSILINFEGTLARYSTPTNAHFDLPDLATHL--ALNRQSMFDNQRQFNPSNGNRGND 276
            E  S+L+  E  L+  S  + +H + P L+  L     +Q  +  +   N SN  RG  
Sbjct: 204 TEARSMLLMEESRLSNKSKSSLSHTNHPSLSNVLFTVPRQQERYPQEYHNNNSNMGRGRS 263

Query: 277 NNSGSYYGSGNGQMGNN 290
                  GS +G+  NN
Sbjct: 264 KKKNRGGGSSDGRYNNN 264

[Close]

BLAST of Lag0008934 vs. TAIR 10
Match: ATMG00300.1 (Gag-Pol-related retrotransposon family protein )

HSP 1 Score: 67.0 bits (162), Expect = 9.8e-11
Identity = 35/95 (36.84%), Postives = 53/95 (55.79%), Query Frame = 0


Query: 438 RNDLYQIELPSIQTPKSEIRSTS--FAGLWHNRLGHASSKVIKSVLKSCNVSTFLNESLH 497
           R+D   I   S++T +S +  T+     LWH+RL H S + ++ ++K   + +    SL 
Sbjct: 43  RHDSLYILQGSVETGESNLAETAKDETRLWHSRLAHMSQRGMELLVKKGFLDSSKVSSLK 102

Query: 498 FCDACQKGKSHRLPFSRSVSHTWQPLELVHCDLWG 531
           FC+ C  GK+HR+ FS     T  PL+ VH DLWG
Sbjct: 103 FCEDCIYGKTHRVNFSTGQHTTKNPLDYVHSDLWG 137

[Close]

BLAST of Lag0008934 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 4.6e-08
Identity = 56/245 (22.86%), Postives = 104/245 (42.45%), Query Frame = 0


Query: 41  LDDKNYLLWKDMVLAILRGQKVDMYVLGTKAQPSELIETTTESGKMLLSNMLYEEWMTVD 100
           +++ NY  W+++ L       V  ++ GT                +L +N     W   D
Sbjct: 26  IEESNYDAWRELFLTHCLSFDVMGHIDGT----------------LLPTNANDVNWQKRD 85

Query: 101 QALSGWLFGSMSP-AIAADVINFKTLREVWKALEEVYGDTSKACVNQFRGILQNTKKGSM 160
             +   L+G+++P       +   T R++W  ++  + +   A   +    L+    G M
Sbjct: 86  GIVKLSLYGTLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSELRTKDIGDM 145

Query: 161 KMIDYLAIMKQASENLKLVGNPVSLDDLVSYVLAGLDSEYIPIVCAIDDKD-LKTWQELS 220
           ++ DY   MK+ +++L+ V  PV+  +LV YVL GL+ ++  I+  I  +    ++ + +
Sbjct: 146 RVADYYRKMKKLADSLRNVDVPVTDRNLVMYVLNGLNPKFDNIINVIKHRQPFPSFDDAA 205

Query: 221 SILINFEGTLARYSTPTNAHFDLPDLATHLALNRQSMFDN-QRQFNPSNGNRGNDNNSGS 280
           ++L   E  L R   P   H D    +T LA +      N QR      G RG    +  
Sbjct: 206 TMLQEEEDRLKRAIKPNPTHVDHSSSSTVLACSEAPPVTNFQRSGGNQMGYRGRGRGNNI 254

Query: 281 YYGSG 283
           + G G
Sbjct: 266 FRGRG 254

The following BLAST results are available for this feature:

BLAST of Lag0008934 vs. NCBI nr


Match Name	E-value	Identity	Description
GAU51268.1	5.5e-205	39.81	hypothetical protein TSUD_412550 [Trifolium subterraneum]	[more]
GAU19483.1	3.5e-204	39.56	hypothetical protein TSUD_77270 [Trifolium subterraneum]	[more]
PNX94503.1	6.3e-201	39.79	putative retrotransposon Ty1-copia subclass protein, partial [Trifolium pratense...	[more]
PNY01489.1	1.1e-192	39.58	copia-like polyprotein, partial [Trifolium pratense]	[more]
KYP50444.1	1.4e-189	40.02	Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cajanus cajan]	[more]

BLAST of Lag0008934 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q94HW2	4.7e-143	33.75	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	5.1e-137	32.69	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P10978	5.2e-73	26.06	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
P04146	2.0e-53	24.42	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
P92520	4.9e-23	48.03	Uncharacterized mitochondrial protein AtMg00820 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of Lag0008934 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A803PM38	8.8e-209	41.55	Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1	[more]
A0A2Z6P4D5	2.7e-205	39.81	Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 ...	[more]
A0A2Z6MBG6	1.7e-204	39.56	Integrase catalytic domain-containing protein OS=Trifolium subterraneum OX=3900 ...	[more]
A0A2K3MUJ9	3.0e-201	39.79	Putative retrotransposon Ty1-copia subclass protein (Fragment) OS=Trifolium prat...	[more]
A0A2K3NEN7	5.2e-193	39.58	Copia-like polyprotein (Fragment) OS=Trifolium pratense OX=57577 GN=L195_g024786...	[more]

BLAST of Lag0008934 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G23160.1	2.6e-35	45.00	cysteine-rich RLK (RECEPTOR-like protein kinase) 8	[more]
ATMG00820.1	3.5e-24	48.03	Reverse transcriptase (RNA-dependent DNA polymerase)	[more]
AT5G48050.1	7.5e-11	24.12	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE...	[more]
ATMG00300.1	9.8e-11	36.84	Gag-Pol-related retrotransposon family protein	[more]
AT1G34070.1	4.6e-08	22.86	CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE...	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013103	Reverse transcriptase, RNA-dependent DNA polymerase	PFAM	PF07727	RVT_2	coord: 882..1010 e-value: 3.1E-37 score: 128.5
None	No IPR available	PFAM	PF14223	Retrotran_gag_2	coord: 96..224 e-value: 2.3E-13 score: 50.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 258..292
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 757..785
None	No IPR available	PANTHER	PTHR45895	FAMILY NOT NAMED	coord: 371..731 coord: 855..1010
IPR001584	Integrase, catalytic core	PFAM	PF00665	rve	coord: 519..616 e-value: 1.8E-8 score: 34.6
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 516..680 score: 20.010164
IPR025724	GAG-pre-integrase domain	PFAM	PF13976	gag_pre-integrs	coord: 441..505 e-value: 7.9E-12 score: 44.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 512..697 e-value: 4.3E-33 score: 116.3
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 518..677

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0008934.1	Lag0008934.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
molecular_function	GO:0003676	nucleic acid binding