Lag0008889 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008889
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionProtein kinase domain-containing protein
Locationchr9: 31787145 .. 31787510 (-)
RNA-Seq ExpressionLag0008889
SyntenyLag0008889
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGAAGATATCTCACGAGTCGAGACAGGGGATGAAGGAGTTCGAGGCAGCGATAGTGGGTGTAGGGCGGCTCCAGCACCGGAACTTGGTGGCGCTGCTGGGGTACTGCCGGCGAAAAGAGGAGTTGTTTTTGGTGTATGATTACAAGGCGAATGGAAGCTTGGATAGGTATTTACACGACTGGCCAGAAATGACGATAACTTGGGAGTAGAGATTTGAGATAATAAAAGAGGTTGCATCAGCGCTGTTTTATCTGCATGAACAATGCGAGAAAGTTGTGATTCATAGAGATGTGGAGGCAAGTAATGTGTTGCCGCCGGAGAGGAGCTTCGGCGGCGACTGCGAGGAGCTCCGGCGACGGTGA

mRNA sequence

ATGAAGAAGATATCTCACGAGTCGAGACAGGGGATGAAGGAGTTCGAGGCAGCGATAGTGGGTGTAGGGCGGCTCCAGCACCGGAACTTGGTGGCGCTGCTGGGGTACTGCCGGCGAAAAGAGGAGTTGTTTTTGGTGTATGATTACAAGGCGAATGGAAGCTTGGATAGAGATGTGGAGGCAAGTAATGTGTTGCCGCCGGAGAGGAGCTTCGGCGGCGACTGCGAGGAGCTCCGGCGACGGTGA

Coding sequence (CDS)

ATGAAGAAGATATCTCACGAGTCGAGACAGGGGATGAAGGAGTTCGAGGCAGCGATAGTGGGTGTAGGGCGGCTCCAGCACCGGAACTTGGTGGCGCTGCTGGGGTACTGCCGGCGAAAAGAGGAGTTGTTTTTGGTGTATGATTACAAGGCGAATGGAAGCTTGGATAGAGATGTGGAGGCAAGTAATGTGTTGCCGCCGGAGAGGAGCTTCGGCGGCGACTGCGAGGAGCTCCGGCGACGGTGA

Protein sequence

MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDRDVEASNVLPPERSFGGDCEELRRR
Homology
[Close]
BLAST of Lag0008889 vs. NCBI nr
Match: KAF3447743.1 (hypothetical protein FNV43_RR08446 [Rhamnella rubrinervis])

HSP 1 Score: 105.5 bits (262), Expect = 2.1e-19
Identity = 49/65 (75.38%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 1   MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDRDVE 60
           +K++SHESRQGM+EF A IV +GRL+HRNLV LLGYCRRK EL LVYDY +NGSLD+DV+
Sbjct: 321 VKRVSHESRQGMREFVAEIVSMGRLRHRNLVQLLGYCRRKGELMLVYDYMSNGSLDKDVK 380

Query: 61  ASNVL 66
           ASNVL
Sbjct: 381 ASNVL 385

[Close]
BLAST of Lag0008889 vs. NCBI nr
Match: PHT38059.1 (L-type lectin-domain containing receptor kinase IV.1 [Capsicum baccatum])

HSP 1 Score: 102.4 bits (254), Expect = 1.8e-18
Identity = 47/65 (72.31%), Postives = 56/65 (86.15%), Query Frame = 0 

Query: 1   MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDRDVE 60
           +KKISHESRQGMKEF   IV +GR+QHRN+V LLGYCRRK EL LVY+Y +N SLD+D++
Sbjct: 355 VKKISHESRQGMKEFVLEIVSIGRMQHRNVVPLLGYCRRKRELLLVYEYMSNESLDKDIK 414

Query: 61  ASNVL 66
           ASNVL
Sbjct: 415 ASNVL 419

[Close]
BLAST of Lag0008889 vs. NCBI nr
Match: KAA8549306.1 (hypothetical protein F0562_000990 [Nyssa sinensis])

HSP 1 Score: 100.5 bits (249), Expect = 6.9e-18
Identity = 47/65 (72.31%), Postives = 55/65 (84.62%), Query Frame = 0 

Query: 1   MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDRDVE 60
           +KK+SH+S+QGMKEF A I  +GRL+HRNLV LLGYCRRK EL LVYDY  NGSLD+ V+
Sbjct: 376 VKKVSHDSKQGMKEFVAEIASMGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKGVK 435

Query: 61  ASNVL 66
           ASNVL
Sbjct: 436 ASNVL 440

[Close]
BLAST of Lag0008889 vs. NCBI nr
Match: KAF2306170.1 (hypothetical protein GH714_014823 [Hevea brasiliensis])

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17
Identity = 49/67 (73.13%), Postives = 56/67 (83.58%), Query Frame = 0 

Query: 1   MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDR--D 60
           +KK+SHE+RQGMK F A IV +GRL+HRNLV LLGYCRRK EL LVYDY  NGSLD+  D
Sbjct: 380 VKKVSHETRQGMKVFVAEIVSIGRLRHRNLVTLLGYCRRKGELLLVYDYMLNGSLDKYLD 439

Query: 61  VEASNVL 66
           V+ASNVL
Sbjct: 440 VKASNVL 446

[Close]
BLAST of Lag0008889 vs. NCBI nr
Match: KAF3635849.1 (L-type lectin-domain containing receptor kinase IV.2 [Capsicum annuum])

HSP 1 Score: 99.4 bits (246), Expect = 1.5e-17
Identity = 46/65 (70.77%), Postives = 55/65 (84.62%), Query Frame = 0 

Query: 1   MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDRDVE 60
           +KKISHES QGMKEF   IV +GR+QHRN+V LLGYCRRK EL LVY+Y +N SLD+D++
Sbjct: 369 VKKISHESIQGMKEFVLEIVSIGRMQHRNVVPLLGYCRRKRELLLVYEYMSNESLDKDIK 428

Query: 61  ASNVL 66
           ASNVL
Sbjct: 429 ASNVL 433

[Close]
BLAST of Lag0008889 vs. ExPASy Swiss-Prot
Match: Q6H7D2 (L-type lectin-domain containing receptor kinase SIT1 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT1 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 1.9e-18
Identity = 43/63 (68.25%), Postives = 52/63 (82.54%), Query Frame = 0 

Query: 1   MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDRDVE 60
           +KK+SHESRQGMKEF A +V +G+L+HRNLV LLGYCR+K EL LVYDY  NGSLD+ + 
Sbjct: 385 VKKVSHESRQGMKEFIAEVVSIGQLRHRNLVQLLGYCRQKGELLLVYDYMPNGSLDKYLY 444

Query: 61  ASN 64
           A N
Sbjct: 445 AEN 447

[Close]
BLAST of Lag0008889 vs. ExPASy Swiss-Prot
Match: O80939 (L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana OX=3702 GN=LECRK41 PE=2 SV=1)

HSP 1 Score: 90.9 bits (224), Expect = 7.2e-18
Identity = 41/57 (71.93%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1   MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDR 58
           +K++SHESRQGMKEF A IV +GR+ HRNLV LLGYCRR+ EL LVYDY  NGSLD+
Sbjct: 375 VKRVSHESRQGMKEFVAEIVSIGRMSHRNLVPLLGYCRRRGELLLVYDYMPNGSLDK 431

[Close]
BLAST of Lag0008889 vs. ExPASy Swiss-Prot
Match: Q7XUN6 (L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japonica OX=39947 GN=SIT2 PE=2 SV=2)

HSP 1 Score: 89.4 bits (220), Expect = 2.1e-17
Identity = 40/59 (67.80%), Postives = 49/59 (83.05%), Query Frame = 0 

Query: 1   MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDRDV 60
           +KK++H SRQGM+EF A +V +GRL+HRNLV LLGYCRRK EL LVYDY  NGSLD+ +
Sbjct: 380 VKKVAHGSRQGMREFVAEVVSIGRLRHRNLVQLLGYCRRKGELLLVYDYMPNGSLDKQL 438

[Close]
BLAST of Lag0008889 vs. ExPASy Swiss-Prot
Match: Q9M345 (L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana OX=3702 GN=LECRK42 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-17
Identity = 39/57 (68.42%), Postives = 48/57 (84.21%), Query Frame = 0 

Query: 1   MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDR 58
           +K++SH+S+QGMKEF A IV +GR+ HRNLV LLGYCRR+ EL LVYDY  NGSLD+
Sbjct: 375 VKRVSHDSKQGMKEFVAEIVSIGRMSHRNLVPLLGYCRRRGELLLVYDYMPNGSLDK 431

[Close]
BLAST of Lag0008889 vs. ExPASy Swiss-Prot
Match: O81292 (L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana OX=3702 GN=LECRK43 PE=2 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.6e-17
Identity = 39/57 (68.42%), Postives = 49/57 (85.96%), Query Frame = 0 

Query: 1   MKKISHESRQGMKEFEAAIVGVGRLQHRNLVALLGYCRRKEELFLVYDYKANGSLDR 58
           +K++S+ESRQG+KEF A IV +GR+ HRNLV LLGYCRR++EL LVYDY  NGSLD+
Sbjct: 383 VKRVSNESRQGLKEFVAEIVSIGRMSHRNLVPLLGYCRRRDELLLVYDYMPNGSLDK 439

The following BLAST results are available for this feature:
BLAST of Lag0008889 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF3447743.12.1e-1975.38hypothetical protein FNV43_RR08446 [Rhamnella rubrinervis][more]
PHT38059.11.8e-1872.31L-type lectin-domain containing receptor kinase IV.1 [Capsicum baccatum][more]
KAA8549306.16.9e-1872.31hypothetical protein F0562_000990 [Nyssa sinensis][more]
KAF2306170.11.5e-1773.13hypothetical protein GH714_014823 [Hevea brasiliensis][more]
KAF3635849.11.5e-1770.77L-type lectin-domain containing receptor kinase IV.2 [Capsicum annuum][more]
BLAST of Lag0008889 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6H7D21.9e-1868.25L-type lectin-domain containing receptor kinase SIT1 OS=Oryza sativa subsp. japo... [more]
O809397.2e-1871.93L-type lectin-domain containing receptor kinase IV.1 OS=Arabidopsis thaliana OX=... [more]
Q7XUN62.1e-1767.80L-type lectin-domain containing receptor kinase SIT2 OS=Oryza sativa subsp. japo... [more]
Q9M3453.6e-1768.42L-type lectin-domain containing receptor kinase IV.2 OS=Arabidopsis thaliana OX=... [more]
O812923.6e-1768.42L-type lectin-domain containing receptor kinase IV.3 OS=Arabidopsis thaliana OX=... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.200.20Phosphorylase Kinase; domain 1coord: 1..50
e-value: 1.4E-14
score: 56.0
NoneNo IPR availablePANTHERPTHR27007FAMILY NOT NAMEDcoord: 2..57
NoneNo IPR availablePANTHERPTHR27007:SF307L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE IV.1-LIKEcoord: 2..57
IPR001245Serine-threonine/tyrosine-protein kinase, catalytic domainPFAMPF07714PK_Tyr_Ser-Thrcoord: 3..60
e-value: 6.9E-6
score: 25.5
IPR011009Protein kinase-like domain superfamilySUPERFAMILY56112Protein kinase-like (PK-like)coord: 1..63

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008889.1Lag0008889.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006468 protein phosphorylation
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane
molecular_function GO:0005524 ATP binding
molecular_function GO:0030246 carbohydrate binding
molecular_function GO:0020037 heme binding
molecular_function GO:0005506 iron ion binding
molecular_function GO:0004497 monooxygenase activity
molecular_function GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
molecular_function GO:0004674 protein serine/threonine kinase activity
molecular_function GO:0004672 protein kinase activity