Lag0008831 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008831
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Locationchr9: 30836549 .. 30837875 (-)
RNA-Seq ExpressionLag0008831
SyntenyLag0008831
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATGGTTCAATCAAAGCTCCTGAGGCAATCATTCAGACTGAAGGACAACCACTGTGCATCAATCCTGAGCATGAAGTCTGGTACGAACAAGATCAAACATTGATTACCTTGATTAACTCTACTTTGACATAGACGACGTTATCGTATGTTATCGGTTGTCAGACTTCTAAGGAAGTATGGGATACCTTGGAGAAACACTTCTCTTCCTCTACTCGAACCAATATCATAAGTCTGAAAACTGAACTACAAAGTATTTCGAAACAATCTGGAGAAACAATTGATGCCTATGTATGTCGTGGGAAGGAAATTGTCAATAAATTGGCTGCGGTTTCTATTGTGATCGATGTTGAGGATTTGATAACCTACACGATCAATGGCTTGCCATCCACCTATAATATCTTCAAGACCTCACTGCGAACTCGTTCTCAGAGCCTCTCGTTTGATGAACTACACATTCTCATGAAAACGGAGGAAATGACTCTTGAAAAACAATCCAAGGTTGAGGATGCTACTACTGTTTCGCATCTCGCTATGGCAGTGAATCTTGAATCTCAAGGCCGTGGGGGATGGCGTCAGCAAGGAACTCGTGGTAGAGGCACTGGTGGTGGCTGTTTTGACAATAGTCGAGGACGCGGTCGAGGAGGGGTAACTCTTTTTCTTTGGGCAATACCAATGGTTCTGGTCAAGGTCAGTTCTCGTCTTCTTCCTTCTCTGGACAGAATTCAAGCAAGGTGAATTGTCAGATTTGTCACAAATACGGTCATAATGCTTTTGACTGCTTCAATTGAATGAACTATTCCTTCCAAGGAAGACATCCTCCAACGAAACTCACTGCTATGGATGCCTCTGCCAGCTCTAATACTAATGGTTTTACTTCTGGAACTTTGCCTCAGGACTCCAATGTTTGGCTGACTGATATAGGGTGCAATGCGCATTTGACCAATGAGTTAGCAAATCTGAATGTGTCTACTGCATACAACGGTGATGAGAACATTACAGTAGGTAACGGTCAGTCCCTTTCTATCTCCCATGTTGGTTCTGGACAACTTTCCTTATCTGATAAAACCTTTAATCTTTCTAATCTCCTTCGTGTGCCCAACATTACTACCAATTTACTTTCTGTTCACCAATTTTGTACTGATAGCAACTGTCTTTTCATCTTTGATTCTTTTTCCTTCACTATCCAAGACAAAACATCGGGCCAAATTCTGTTCCATGGACCCAACATTAATGGTTTGTATCCCATATCCACCTTACCTGTTTCAACAGCACCAGTAGGTCTCTTTGCTCAAGTTGGTGCCAAGGTCTCTTCTACTATATGA

mRNA sequence

ATGTTGATGGTTCAATCAAAGCTCCTGAGGCAATCATTCAGACTGAAGGACAACCACTGTGCATCAATCCTGAGCATGAAGTCTGTATGGGATACCTTGGAGAAACACTTCTCTTCCTCTACTCGAACCAATATCATAAGTCTGAAAACTGAACTACAAAGTATTTCGAAACAATCTGGAGAAACAATTGATGCCTATGTATGTCGTGGGAAGGAAATTGTCAATAAATTGGCTGCGGTTTCTATTGTGATCGATGTTGAGGATTTGATAACCTACACGATCAATGGCTTGCCATCCACCTATAATATCTTCAAGACCTCACTGCGAACTCGTTCTCAGAGCCTCTCGTTTGATGAACTACACATTCTCATGAAAACGGAGGAAATGACTCTTGAAAAACAATCCAAGGTTGAGGATGCTACTACTGTTTCGCATCTCGCTATGGCAGTGAATCTTGAATCTCAAGGCCGTGGGGGATGGCGTCAGCAAGGAACTCGTGGTAGAGGCACTGGTGGTGGCTGTTTTGACAATAGTCGAGGACGCGGTCGAGGAGGGGTAACTCTTTTTCTTTGGGCAATACCAATGGTTCTGGTCAAGGTCAGTTCTCGTCTTCTTCCTTCTCTGGACAGAATTCAAGCAAGACATCCTCCAACGAAACTCACTGCTATGGATGCCTCTGCCAGCTCTAATACTAATGGTTTTACTTCTGGAACTTTGCCTCAGGACTCCAATGTTTGGCTGACTGATATAGGGTGCAATGCGCATTTGACCAATGAGTTAGCAAATCTGAATGTGTCTACTGCATACAACGGTGATGAGAACATTACAGTAGGTAACGGTCAGTCCCTTTCTATCTCCCATGTTGGTTCTGGACAACTTTCCTTATCTGATAAAACCTTTAATCTTTCTAATCTCCTTCGTGTGCCCAACATTACTACCAATTTACTTTCTGTTCACCAATTTTGTACTGATAGCAACTGTCTTTTCATCTTTGATTCTTTTTCCTTCACTATCCAAGACAAAACATCGGGCCAAATTCTGTTCCATGGACCCAACATTAATGGTTTGTATCCCATATCCACCTTACCTGTTTCAACAGCACCAGTAGGTCTCTTTGCTCAAGTTGGTGCCAAGGTCTCTTCTACTATATGA

Coding sequence (CDS)

ATGTTGATGGTTCAATCAAAGCTCCTGAGGCAATCATTCAGACTGAAGGACAACCACTGTGCATCAATCCTGAGCATGAAGTCTGTATGGGATACCTTGGAGAAACACTTCTCTTCCTCTACTCGAACCAATATCATAAGTCTGAAAACTGAACTACAAAGTATTTCGAAACAATCTGGAGAAACAATTGATGCCTATGTATGTCGTGGGAAGGAAATTGTCAATAAATTGGCTGCGGTTTCTATTGTGATCGATGTTGAGGATTTGATAACCTACACGATCAATGGCTTGCCATCCACCTATAATATCTTCAAGACCTCACTGCGAACTCGTTCTCAGAGCCTCTCGTTTGATGAACTACACATTCTCATGAAAACGGAGGAAATGACTCTTGAAAAACAATCCAAGGTTGAGGATGCTACTACTGTTTCGCATCTCGCTATGGCAGTGAATCTTGAATCTCAAGGCCGTGGGGGATGGCGTCAGCAAGGAACTCGTGGTAGAGGCACTGGTGGTGGCTGTTTTGACAATAGTCGAGGACGCGGTCGAGGAGGGGTAACTCTTTTTCTTTGGGCAATACCAATGGTTCTGGTCAAGGTCAGTTCTCGTCTTCTTCCTTCTCTGGACAGAATTCAAGCAAGACATCCTCCAACGAAACTCACTGCTATGGATGCCTCTGCCAGCTCTAATACTAATGGTTTTACTTCTGGAACTTTGCCTCAGGACTCCAATGTTTGGCTGACTGATATAGGGTGCAATGCGCATTTGACCAATGAGTTAGCAAATCTGAATGTGTCTACTGCATACAACGGTGATGAGAACATTACAGTAGGTAACGGTCAGTCCCTTTCTATCTCCCATGTTGGTTCTGGACAACTTTCCTTATCTGATAAAACCTTTAATCTTTCTAATCTCCTTCGTGTGCCCAACATTACTACCAATTTACTTTCTGTTCACCAATTTTGTACTGATAGCAACTGTCTTTTCATCTTTGATTCTTTTTCCTTCACTATCCAAGACAAAACATCGGGCCAAATTCTGTTCCATGGACCCAACATTAATGGTTTGTATCCCATATCCACCTTACCTGTTTCAACAGCACCAGTAGGTCTCTTTGCTCAAGTTGGTGCCAAGGTCTCTTCTACTATATGA

Protein sequence

MLMVQSKLLRQSFRLKDNHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKLAAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKVEDATTVSHLAMAVNLESQGRGGWRQQGTRGRGTGGGCFDNSRGRGRGGVTLFLWAIPMVLVKVSSRLLPSLDRIQARHPPTKLTAMDASASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSISHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQILFHGPNINGLYPISTLPVSTAPVGLFAQVGAKVSSTI
Homology
BLAST of Lag0008831 vs. NCBI nr
Match: KAA8519786.1 (hypothetical protein F0562_014124 [Nyssa sinensis])

HSP 1 Score: 226.5 bits (576), Expect = 4.0e-55
Identity = 147/380 (38.68%), Postives = 213/380 (56.05%), Query Frame = 0

Query: 18  NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
           +H     + +  W  LE+ FS+STR+NI+ LK+ L +ISK   ++ID+Y+ + K+  + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196

Query: 78  AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
           A+VS++I+ ED++ Y +NGLP  YN FKTS+RT+S++++ +E++ ++K EE T+E   K 
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256

Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
            ++       MA N         G+      GRG G G F N  GR    GR      G 
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316

Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
             L +    P    + S+   P + +I                   Q + P  +LTAM  
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376

Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
           SA+ NT    S       N W TD G   H+T +LANLN    Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436

Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
           SH G   +  +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS  F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496

BLAST of Lag0008831 vs. NCBI nr
Match: KAA8524269.1 (hypothetical protein F0562_010692 [Nyssa sinensis])

HSP 1 Score: 225.7 bits (574), Expect = 6.7e-55
Identity = 147/380 (38.68%), Postives = 213/380 (56.05%), Query Frame = 0

Query: 18  NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
           +H     + +  W  LE+ FS+STR+NI+ LK+ L +ISK   ++ID+Y+ + K+  + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196

Query: 78  AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
           A+VS++I+ ED++ Y +NGLP  YN FKTS+RT+S++++ +E++ ++K EE T+E   K 
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256

Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
            ++       MA N         G+      GRG G G F N  GR    GR      G 
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316

Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
             L +    P    + S+   P + +I                   Q + P  +LTAM  
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376

Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
           SA+ NT    S       N W TD G   H+T +LANLN    Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436

Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
           SH G   +  +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS  F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496

BLAST of Lag0008831 vs. NCBI nr
Match: KAA8535282.1 (hypothetical protein F0562_030285 [Nyssa sinensis])

HSP 1 Score: 224.9 bits (572), Expect = 1.1e-54
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0

Query: 18  NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
           +H     + +  W  LE+ FS+STR+NI+ LK+ L +ISK   ++ID+Y+ + K   + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKRARDSL 196

Query: 78  AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
           A+VS++I+ ED++ Y +NGLP  YN FKTS+RT+S++++ +E++ ++K EE T+E   K 
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256

Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
            ++       MA N         G+      GRG G G F N  GR    GR      G 
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316

Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
             L +    P    + S+   P + +I                   Q + P  +LTAM  
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376

Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
           SA+ NT    S       N W TD G   H+T +LANLN    Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436

Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
           SH G   +  +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS  F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496

BLAST of Lag0008831 vs. NCBI nr
Match: KAA8516701.1 (hypothetical protein F0562_016793 [Nyssa sinensis])

HSP 1 Score: 224.2 bits (570), Expect = 2.0e-54
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0

Query: 18  NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
           +H     + +  W  LE+ FS+STR+NI+ LK+ L +ISK   ++ID+Y+ + K+  + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196

Query: 78  AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
           A+VS++I+ ED++ Y +NGLP  YN FKTS+RT+S++++ +E++ ++K EE T+E   K 
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256

Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
            ++       MA N         G+      GRG G G F N  GR    GR      G 
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316

Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
             L +    P    + S+   P + +I                   Q + P  +LTAM  
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376

Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
           SA+ NT    S       N W TD G   H+T +LANLN    Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436

Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
           SH G   +  +D TF L+N+L VP + TNLLSVHQFC D++C FIFDS  F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPFMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496

BLAST of Lag0008831 vs. NCBI nr
Match: KAA8521875.1 (hypothetical protein F0562_012811 [Nyssa sinensis])

HSP 1 Score: 223.0 bits (567), Expect = 4.4e-54
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0

Query: 18  NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
           +H     + +  W  LE+ FS+STR+NI+ LK+ L +ISK   ++ID+Y+ + K+  + L
Sbjct: 443 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 502

Query: 78  AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
           A+VS++I+ ED++ Y +NGLP  YN FKTS+RT+S++++ +E++ ++K EE T+E   K 
Sbjct: 503 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 562

Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
            ++       MA N         G+      GRG G G F N  GR    GR      G 
Sbjct: 563 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 622

Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
             L +    P    + S+   P + +I                   Q + P  +LTAM  
Sbjct: 623 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 682

Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
           SA+ NT    S       N W TD G   H+T +LANLN    Y GD+NIT+ NGQ+L I
Sbjct: 683 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 742

Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
           SH G   +  +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS  F IQDK + Q
Sbjct: 743 SHSGQSSIHANDHTFILNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 802

BLAST of Lag0008831 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 7.3e-20
Identity = 96/372 (25.81%), Postives = 163/372 (43.82%), Query Frame = 0

Query: 29  VWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKLAAVSIVIDVED 88
           +W+TL K +++ +  ++  L+T+L+  +K + +TID Y+       ++LA +   +D ++
Sbjct: 109 IWETLRKIYANPSYGHVTQLRTQLKQWTKGT-KTIDDYMQGLVTRFDQLALLGKPMDHDE 168

Query: 89  LITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSK---VEDATTVSH 148
            +   +  LP  Y      +  +    +  E+H      E  L  +SK   V  AT +  
Sbjct: 169 QVERVLENLPEEYKPVIDQIAAKDTPPTLTEIH------ERLLNHESKILAVSSATVIPI 228

Query: 149 LAMAVNLESQGRGGWRQQGTRGRGTGGGCFDNSRGRGRGGVTLF---------------L 208
            A AV+  +         G R         +N+    +   T F               +
Sbjct: 229 TANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQI 288

Query: 209 WAIPMVLVKVSSRLLPSLDRIQARHPPTKLTAMDASASSNTNGFTSGTLPQDSNVWLTDI 268
             +     K  S+L   L  + ++ PP+  T     A+           P  SN WL D 
Sbjct: 289 CGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGS------PYSSNNWLLDS 348

Query: 269 GCNAHLTNELANLNVSTAYNGDENITVGNGQSLSISHVGSGQLSLSDKTFNLSNLLRVPN 328
           G   H+T++  NL++   Y G +++ V +G ++ ISH GS  LS   +  NL N+L VPN
Sbjct: 349 GATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPN 408

Query: 329 ITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQILFHGPNINGLY--PISTLPVSTAP 381
           I  NL+SV++ C  +     F   SF ++D  +G  L  G   + LY  PI+    S+ P
Sbjct: 409 IHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIA----SSQP 463

BLAST of Lag0008831 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 72.4 bits (176), Expect = 1.3e-11
Identity = 82/360 (22.78%), Postives = 152/360 (42.22%), Query Frame = 0

Query: 29  VWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKLAAVSIVIDVED 88
           +W+TL K +++ +  ++    T+L+ I++                 ++LA +   +D ++
Sbjct: 109 IWETLRKIYANPSYGHV----TQLRFITR----------------FDQLALLGKPMDHDE 168

Query: 89  LITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKVE----DATTVS 148
            +   +  LP  Y      +  +    S  E+H  +   E  L   +  E     A  V+
Sbjct: 169 QVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVT 228

Query: 149 HLAMAVNLESQGRGGWRQQGTRGRGTGGGCFDNSRGRGRGGVTL-FLWAIPMVLVK-VSS 208
           H     N     RG  R        +      +S  R        +L    +  V+  S+
Sbjct: 229 HRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSA 288

Query: 209 RLLPSLDRIQARHPPTKLTAMDASASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELAN 268
           +  P L + Q+     + T+         N   +   P ++N WL D G   H+T++  N
Sbjct: 289 KRCPQLHQFQSTTNQQQSTSPFTPWQPRAN--LAVNSPYNANNWLLDSGATHHITSDFNN 348

Query: 269 LNVSTAYNGDENITVGNGQSLSISHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFC 328
           L+    Y G +++ + +G ++ I+H GS  L  S ++ +L+ +L VPNI  NL+SV++ C
Sbjct: 349 LSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLC 408

Query: 329 TDSNCLFIFDSFSFTIQDKTSGQILFHGPNINGLY--PISTLPVSTAPVGLFAQVGAKVS 381
             +     F   SF ++D  +G  L  G   + LY  PI+    S+  V +FA   +K +
Sbjct: 409 NTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIA----SSQAVSMFASPCSKAT 442

BLAST of Lag0008831 vs. ExPASy TrEMBL
Match: A0A5J4ZPW7 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_014124 PE=4 SV=1)

HSP 1 Score: 226.5 bits (576), Expect = 1.9e-55
Identity = 147/380 (38.68%), Postives = 213/380 (56.05%), Query Frame = 0

Query: 18  NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
           +H     + +  W  LE+ FS+STR+NI+ LK+ L +ISK   ++ID+Y+ + K+  + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196

Query: 78  AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
           A+VS++I+ ED++ Y +NGLP  YN FKTS+RT+S++++ +E++ ++K EE T+E   K 
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256

Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
            ++       MA N         G+      GRG G G F N  GR    GR      G 
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316

Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
             L +    P    + S+   P + +I                   Q + P  +LTAM  
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376

Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
           SA+ NT    S       N W TD G   H+T +LANLN    Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436

Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
           SH G   +  +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS  F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496

BLAST of Lag0008831 vs. ExPASy TrEMBL
Match: A0A5J5A1U7 (Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_010692 PE=4 SV=1)

HSP 1 Score: 225.7 bits (574), Expect = 3.3e-55
Identity = 147/380 (38.68%), Postives = 213/380 (56.05%), Query Frame = 0

Query: 18  NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
           +H     + +  W  LE+ FS+STR+NI+ LK+ L +ISK   ++ID+Y+ + K+  + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196

Query: 78  AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
           A+VS++I+ ED++ Y +NGLP  YN FKTS+RT+S++++ +E++ ++K EE T+E   K 
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256

Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
            ++       MA N         G+      GRG G G F N  GR    GR      G 
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316

Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
             L +    P    + S+   P + +I                   Q + P  +LTAM  
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376

Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
           SA+ NT    S       N W TD G   H+T +LANLN    Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436

Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
           SH G   +  +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS  F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496

BLAST of Lag0008831 vs. ExPASy TrEMBL
Match: A0A5J5B049 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_030285 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 5.6e-55
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0

Query: 18  NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
           +H     + +  W  LE+ FS+STR+NI+ LK+ L +ISK   ++ID+Y+ + K   + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKRARDSL 196

Query: 78  AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
           A+VS++I+ ED++ Y +NGLP  YN FKTS+RT+S++++ +E++ ++K EE T+E   K 
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256

Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
            ++       MA N         G+      GRG G G F N  GR    GR      G 
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316

Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
             L +    P    + S+   P + +I                   Q + P  +LTAM  
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376

Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
           SA+ NT    S       N W TD G   H+T +LANLN    Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436

Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
           SH G   +  +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS  F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496

BLAST of Lag0008831 vs. ExPASy TrEMBL
Match: A0A5J4ZHB6 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_016793 PE=4 SV=1)

HSP 1 Score: 224.2 bits (570), Expect = 9.5e-55
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0

Query: 18  NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
           +H     + +  W  LE+ FS+STR+NI+ LK+ L +ISK   ++ID+Y+ + K+  + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196

Query: 78  AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
           A+VS++I+ ED++ Y +NGLP  YN FKTS+RT+S++++ +E++ ++K EE T+E   K 
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256

Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
            ++       MA N         G+      GRG G G F N  GR    GR      G 
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316

Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
             L +    P    + S+   P + +I                   Q + P  +LTAM  
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376

Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
           SA+ NT    S       N W TD G   H+T +LANLN    Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436

Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
           SH G   +  +D TF L+N+L VP + TNLLSVHQFC D++C FIFDS  F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPFMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496

BLAST of Lag0008831 vs. ExPASy TrEMBL
Match: A0A5J4ZT09 (Flavin-containing monooxygenase OS=Nyssa sinensis OX=561372 GN=F0562_012811 PE=3 SV=1)

HSP 1 Score: 223.0 bits (567), Expect = 2.1e-54
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0

Query: 18  NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
           +H     + +  W  LE+ FS+STR+NI+ LK+ L +ISK   ++ID+Y+ + K+  + L
Sbjct: 443 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 502

Query: 78  AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
           A+VS++I+ ED++ Y +NGLP  YN FKTS+RT+S++++ +E++ ++K EE T+E   K 
Sbjct: 503 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 562

Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
            ++       MA N         G+      GRG G G F N  GR    GR      G 
Sbjct: 563 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 622

Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
             L +    P    + S+   P + +I                   Q + P  +LTAM  
Sbjct: 623 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 682

Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
           SA+ NT    S       N W TD G   H+T +LANLN    Y GD+NIT+ NGQ+L I
Sbjct: 683 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 742

Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
           SH G   +  +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS  F IQDK + Q
Sbjct: 743 SHSGQSSIHANDHTFILNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 802

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA8519786.14.0e-5538.68hypothetical protein F0562_014124 [Nyssa sinensis][more]
KAA8524269.16.7e-5538.68hypothetical protein F0562_010692 [Nyssa sinensis][more]
KAA8535282.11.1e-5438.68hypothetical protein F0562_030285 [Nyssa sinensis][more]
KAA8516701.12.0e-5438.68hypothetical protein F0562_016793 [Nyssa sinensis][more]
KAA8521875.14.4e-5438.68hypothetical protein F0562_012811 [Nyssa sinensis][more]
Match NameE-valueIdentityDescription
Q94HW27.3e-2025.81Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... [more]
Q9ZT941.3e-1122.78Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... [more]
Match NameE-valueIdentityDescription
A0A5J4ZPW71.9e-5538.68Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_0... [more]
A0A5J5A1U73.3e-5538.68Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F05... [more]
A0A5J5B0495.6e-5538.68Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_0... [more]
A0A5J4ZHB69.5e-5538.68Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_016793 PE=4 SV=1[more]
A0A5J4ZT092.1e-5438.68Flavin-containing monooxygenase OS=Nyssa sinensis OX=561372 GN=F0562_012811 PE=3... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 25..132
e-value: 6.0E-16
score: 58.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 157..177
NoneNo IPR availablePANTHERPTHR34222:SF48SUBFAMILY NOT NAMEDcoord: 25..295
NoneNo IPR availablePANTHERPTHR34222FAMILY NOT NAMEDcoord: 25..295

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008831.1Lag0008831.1mRNA