Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGATGGTTCAATCAAAGCTCCTGAGGCAATCATTCAGACTGAAGGACAACCACTGTGCATCAATCCTGAGCATGAAGTCTGGTACGAACAAGATCAAACATTGATTACCTTGATTAACTCTACTTTGACATAGACGACGTTATCGTATGTTATCGGTTGTCAGACTTCTAAGGAAGTATGGGATACCTTGGAGAAACACTTCTCTTCCTCTACTCGAACCAATATCATAAGTCTGAAAACTGAACTACAAAGTATTTCGAAACAATCTGGAGAAACAATTGATGCCTATGTATGTCGTGGGAAGGAAATTGTCAATAAATTGGCTGCGGTTTCTATTGTGATCGATGTTGAGGATTTGATAACCTACACGATCAATGGCTTGCCATCCACCTATAATATCTTCAAGACCTCACTGCGAACTCGTTCTCAGAGCCTCTCGTTTGATGAACTACACATTCTCATGAAAACGGAGGAAATGACTCTTGAAAAACAATCCAAGGTTGAGGATGCTACTACTGTTTCGCATCTCGCTATGGCAGTGAATCTTGAATCTCAAGGCCGTGGGGGATGGCGTCAGCAAGGAACTCGTGGTAGAGGCACTGGTGGTGGCTGTTTTGACAATAGTCGAGGACGCGGTCGAGGAGGGGTAACTCTTTTTCTTTGGGCAATACCAATGGTTCTGGTCAAGGTCAGTTCTCGTCTTCTTCCTTCTCTGGACAGAATTCAAGCAAGGTGAATTGTCAGATTTGTCACAAATACGGTCATAATGCTTTTGACTGCTTCAATTGAATGAACTATTCCTTCCAAGGAAGACATCCTCCAACGAAACTCACTGCTATGGATGCCTCTGCCAGCTCTAATACTAATGGTTTTACTTCTGGAACTTTGCCTCAGGACTCCAATGTTTGGCTGACTGATATAGGGTGCAATGCGCATTTGACCAATGAGTTAGCAAATCTGAATGTGTCTACTGCATACAACGGTGATGAGAACATTACAGTAGGTAACGGTCAGTCCCTTTCTATCTCCCATGTTGGTTCTGGACAACTTTCCTTATCTGATAAAACCTTTAATCTTTCTAATCTCCTTCGTGTGCCCAACATTACTACCAATTTACTTTCTGTTCACCAATTTTGTACTGATAGCAACTGTCTTTTCATCTTTGATTCTTTTTCCTTCACTATCCAAGACAAAACATCGGGCCAAATTCTGTTCCATGGACCCAACATTAATGGTTTGTATCCCATATCCACCTTACCTGTTTCAACAGCACCAGTAGGTCTCTTTGCTCAAGTTGGTGCCAAGGTCTCTTCTACTATATGA
mRNA sequence
ATGTTGATGGTTCAATCAAAGCTCCTGAGGCAATCATTCAGACTGAAGGACAACCACTGTGCATCAATCCTGAGCATGAAGTCTGTATGGGATACCTTGGAGAAACACTTCTCTTCCTCTACTCGAACCAATATCATAAGTCTGAAAACTGAACTACAAAGTATTTCGAAACAATCTGGAGAAACAATTGATGCCTATGTATGTCGTGGGAAGGAAATTGTCAATAAATTGGCTGCGGTTTCTATTGTGATCGATGTTGAGGATTTGATAACCTACACGATCAATGGCTTGCCATCCACCTATAATATCTTCAAGACCTCACTGCGAACTCGTTCTCAGAGCCTCTCGTTTGATGAACTACACATTCTCATGAAAACGGAGGAAATGACTCTTGAAAAACAATCCAAGGTTGAGGATGCTACTACTGTTTCGCATCTCGCTATGGCAGTGAATCTTGAATCTCAAGGCCGTGGGGGATGGCGTCAGCAAGGAACTCGTGGTAGAGGCACTGGTGGTGGCTGTTTTGACAATAGTCGAGGACGCGGTCGAGGAGGGGTAACTCTTTTTCTTTGGGCAATACCAATGGTTCTGGTCAAGGTCAGTTCTCGTCTTCTTCCTTCTCTGGACAGAATTCAAGCAAGACATCCTCCAACGAAACTCACTGCTATGGATGCCTCTGCCAGCTCTAATACTAATGGTTTTACTTCTGGAACTTTGCCTCAGGACTCCAATGTTTGGCTGACTGATATAGGGTGCAATGCGCATTTGACCAATGAGTTAGCAAATCTGAATGTGTCTACTGCATACAACGGTGATGAGAACATTACAGTAGGTAACGGTCAGTCCCTTTCTATCTCCCATGTTGGTTCTGGACAACTTTCCTTATCTGATAAAACCTTTAATCTTTCTAATCTCCTTCGTGTGCCCAACATTACTACCAATTTACTTTCTGTTCACCAATTTTGTACTGATAGCAACTGTCTTTTCATCTTTGATTCTTTTTCCTTCACTATCCAAGACAAAACATCGGGCCAAATTCTGTTCCATGGACCCAACATTAATGGTTTGTATCCCATATCCACCTTACCTGTTTCAACAGCACCAGTAGGTCTCTTTGCTCAAGTTGGTGCCAAGGTCTCTTCTACTATATGA
Coding sequence (CDS)
ATGTTGATGGTTCAATCAAAGCTCCTGAGGCAATCATTCAGACTGAAGGACAACCACTGTGCATCAATCCTGAGCATGAAGTCTGTATGGGATACCTTGGAGAAACACTTCTCTTCCTCTACTCGAACCAATATCATAAGTCTGAAAACTGAACTACAAAGTATTTCGAAACAATCTGGAGAAACAATTGATGCCTATGTATGTCGTGGGAAGGAAATTGTCAATAAATTGGCTGCGGTTTCTATTGTGATCGATGTTGAGGATTTGATAACCTACACGATCAATGGCTTGCCATCCACCTATAATATCTTCAAGACCTCACTGCGAACTCGTTCTCAGAGCCTCTCGTTTGATGAACTACACATTCTCATGAAAACGGAGGAAATGACTCTTGAAAAACAATCCAAGGTTGAGGATGCTACTACTGTTTCGCATCTCGCTATGGCAGTGAATCTTGAATCTCAAGGCCGTGGGGGATGGCGTCAGCAAGGAACTCGTGGTAGAGGCACTGGTGGTGGCTGTTTTGACAATAGTCGAGGACGCGGTCGAGGAGGGGTAACTCTTTTTCTTTGGGCAATACCAATGGTTCTGGTCAAGGTCAGTTCTCGTCTTCTTCCTTCTCTGGACAGAATTCAAGCAAGACATCCTCCAACGAAACTCACTGCTATGGATGCCTCTGCCAGCTCTAATACTAATGGTTTTACTTCTGGAACTTTGCCTCAGGACTCCAATGTTTGGCTGACTGATATAGGGTGCAATGCGCATTTGACCAATGAGTTAGCAAATCTGAATGTGTCTACTGCATACAACGGTGATGAGAACATTACAGTAGGTAACGGTCAGTCCCTTTCTATCTCCCATGTTGGTTCTGGACAACTTTCCTTATCTGATAAAACCTTTAATCTTTCTAATCTCCTTCGTGTGCCCAACATTACTACCAATTTACTTTCTGTTCACCAATTTTGTACTGATAGCAACTGTCTTTTCATCTTTGATTCTTTTTCCTTCACTATCCAAGACAAAACATCGGGCCAAATTCTGTTCCATGGACCCAACATTAATGGTTTGTATCCCATATCCACCTTACCTGTTTCAACAGCACCAGTAGGTCTCTTTGCTCAAGTTGGTGCCAAGGTCTCTTCTACTATATGA
Protein sequence
MLMVQSKLLRQSFRLKDNHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKLAAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKVEDATTVSHLAMAVNLESQGRGGWRQQGTRGRGTGGGCFDNSRGRGRGGVTLFLWAIPMVLVKVSSRLLPSLDRIQARHPPTKLTAMDASASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSISHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQILFHGPNINGLYPISTLPVSTAPVGLFAQVGAKVSSTI
Homology
BLAST of Lag0008831 vs. NCBI nr
Match:
KAA8519786.1 (hypothetical protein F0562_014124 [Nyssa sinensis])
HSP 1 Score: 226.5 bits (576), Expect = 4.0e-55
Identity = 147/380 (38.68%), Postives = 213/380 (56.05%), Query Frame = 0
Query: 18 NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
+H + + W LE+ FS+STR+NI+ LK+ L +ISK ++ID+Y+ + K+ + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196
Query: 78 AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
A+VS++I+ ED++ Y +NGLP YN FKTS+RT+S++++ +E++ ++K EE T+E K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
++ MA N G+ GRG G G F N GR GR G
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316
Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
L + P + S+ P + +I Q + P +LTAM
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376
Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
SA+ NT S N W TD G H+T +LANLN Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436
Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
SH G + +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496
BLAST of Lag0008831 vs. NCBI nr
Match:
KAA8524269.1 (hypothetical protein F0562_010692 [Nyssa sinensis])
HSP 1 Score: 225.7 bits (574), Expect = 6.7e-55
Identity = 147/380 (38.68%), Postives = 213/380 (56.05%), Query Frame = 0
Query: 18 NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
+H + + W LE+ FS+STR+NI+ LK+ L +ISK ++ID+Y+ + K+ + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196
Query: 78 AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
A+VS++I+ ED++ Y +NGLP YN FKTS+RT+S++++ +E++ ++K EE T+E K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
++ MA N G+ GRG G G F N GR GR G
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316
Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
L + P + S+ P + +I Q + P +LTAM
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376
Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
SA+ NT S N W TD G H+T +LANLN Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436
Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
SH G + +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496
BLAST of Lag0008831 vs. NCBI nr
Match:
KAA8535282.1 (hypothetical protein F0562_030285 [Nyssa sinensis])
HSP 1 Score: 224.9 bits (572), Expect = 1.1e-54
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0
Query: 18 NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
+H + + W LE+ FS+STR+NI+ LK+ L +ISK ++ID+Y+ + K + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKRARDSL 196
Query: 78 AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
A+VS++I+ ED++ Y +NGLP YN FKTS+RT+S++++ +E++ ++K EE T+E K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
++ MA N G+ GRG G G F N GR GR G
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316
Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
L + P + S+ P + +I Q + P +LTAM
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376
Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
SA+ NT S N W TD G H+T +LANLN Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436
Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
SH G + +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496
BLAST of Lag0008831 vs. NCBI nr
Match:
KAA8516701.1 (hypothetical protein F0562_016793 [Nyssa sinensis])
HSP 1 Score: 224.2 bits (570), Expect = 2.0e-54
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0
Query: 18 NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
+H + + W LE+ FS+STR+NI+ LK+ L +ISK ++ID+Y+ + K+ + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196
Query: 78 AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
A+VS++I+ ED++ Y +NGLP YN FKTS+RT+S++++ +E++ ++K EE T+E K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
++ MA N G+ GRG G G F N GR GR G
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316
Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
L + P + S+ P + +I Q + P +LTAM
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376
Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
SA+ NT S N W TD G H+T +LANLN Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436
Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
SH G + +D TF L+N+L VP + TNLLSVHQFC D++C FIFDS F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPFMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496
BLAST of Lag0008831 vs. NCBI nr
Match:
KAA8521875.1 (hypothetical protein F0562_012811 [Nyssa sinensis])
HSP 1 Score: 223.0 bits (567), Expect = 4.4e-54
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0
Query: 18 NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
+H + + W LE+ FS+STR+NI+ LK+ L +ISK ++ID+Y+ + K+ + L
Sbjct: 443 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 502
Query: 78 AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
A+VS++I+ ED++ Y +NGLP YN FKTS+RT+S++++ +E++ ++K EE T+E K
Sbjct: 503 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 562
Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
++ MA N G+ GRG G G F N GR GR G
Sbjct: 563 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 622
Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
L + P + S+ P + +I Q + P +LTAM
Sbjct: 623 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 682
Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
SA+ NT S N W TD G H+T +LANLN Y GD+NIT+ NGQ+L I
Sbjct: 683 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 742
Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
SH G + +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS F IQDK + Q
Sbjct: 743 SHSGQSSIHANDHTFILNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 802
BLAST of Lag0008831 vs. ExPASy Swiss-Prot
Match:
Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)
HSP 1 Score: 99.8 bits (247), Expect = 7.3e-20
Identity = 96/372 (25.81%), Postives = 163/372 (43.82%), Query Frame = 0
Query: 29 VWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKLAAVSIVIDVED 88
+W+TL K +++ + ++ L+T+L+ +K + +TID Y+ ++LA + +D ++
Sbjct: 109 IWETLRKIYANPSYGHVTQLRTQLKQWTKGT-KTIDDYMQGLVTRFDQLALLGKPMDHDE 168
Query: 89 LITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSK---VEDATTVSH 148
+ + LP Y + + + E+H E L +SK V AT +
Sbjct: 169 QVERVLENLPEEYKPVIDQIAAKDTPPTLTEIH------ERLLNHESKILAVSSATVIPI 228
Query: 149 LAMAVNLESQGRGGWRQQGTRGRGTGGGCFDNSRGRGRGGVTLF---------------L 208
A AV+ + G R +N+ + T F +
Sbjct: 229 TANAVSHRNTTTTNNNNNGNRNNRYDNRNNNNNSKPWQQSSTNFHPNNNQSKPYLGKCQI 288
Query: 209 WAIPMVLVKVSSRLLPSLDRIQARHPPTKLTAMDASASSNTNGFTSGTLPQDSNVWLTDI 268
+ K S+L L + ++ PP+ T A+ P SN WL D
Sbjct: 289 CGVQGHSAKRCSQLQHFLSSVNSQQPPSPFTPWQPRANLALGS------PYSSNNWLLDS 348
Query: 269 GCNAHLTNELANLNVSTAYNGDENITVGNGQSLSISHVGSGQLSLSDKTFNLSNLLRVPN 328
G H+T++ NL++ Y G +++ V +G ++ ISH GS LS + NL N+L VPN
Sbjct: 349 GATHHITSDFNNLSLHQPYTGGDDVMVADGSTIPISHTGSTSLSTKSRPLNLHNILYVPN 408
Query: 329 ITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQILFHGPNINGLY--PISTLPVSTAP 381
I NL+SV++ C + F SF ++D +G L G + LY PI+ S+ P
Sbjct: 409 IHKNLISVYRLCNANGVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIA----SSQP 463
BLAST of Lag0008831 vs. ExPASy Swiss-Prot
Match:
Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)
HSP 1 Score: 72.4 bits (176), Expect = 1.3e-11
Identity = 82/360 (22.78%), Postives = 152/360 (42.22%), Query Frame = 0
Query: 29 VWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKLAAVSIVIDVED 88
+W+TL K +++ + ++ T+L+ I++ ++LA + +D ++
Sbjct: 109 IWETLRKIYANPSYGHV----TQLRFITR----------------FDQLALLGKPMDHDE 168
Query: 89 LITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKVE----DATTVS 148
+ + LP Y + + S E+H + E L + E A V+
Sbjct: 169 QVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLINRESKLLALNSAEVVPITANVVT 228
Query: 149 HLAMAVNLESQGRGGWRQQGTRGRGTGGGCFDNSRGRGRGGVTL-FLWAIPMVLVK-VSS 208
H N RG R + +S R +L + V+ S+
Sbjct: 229 HRNTNTNRNQNNRGDNRNYNNNNNRSNSWQPSSSGSRSDNRQPKPYLGRCQICSVQGHSA 288
Query: 209 RLLPSLDRIQARHPPTKLTAMDASASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELAN 268
+ P L + Q+ + T+ N + P ++N WL D G H+T++ N
Sbjct: 289 KRCPQLHQFQSTTNQQQSTSPFTPWQPRAN--LAVNSPYNANNWLLDSGATHHITSDFNN 348
Query: 269 LNVSTAYNGDENITVGNGQSLSISHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFC 328
L+ Y G +++ + +G ++ I+H GS L S ++ +L+ +L VPNI NL+SV++ C
Sbjct: 349 LSFHQPYTGGDDVMIADGSTIPITHTGSASLPTSSRSLDLNKVLYVPNIHKNLISVYRLC 408
Query: 329 TDSNCLFIFDSFSFTIQDKTSGQILFHGPNINGLY--PISTLPVSTAPVGLFAQVGAKVS 381
+ F SF ++D +G L G + LY PI+ S+ V +FA +K +
Sbjct: 409 NTNRVSVEFFPASFQVKDLNTGVPLLQGKTKDELYEWPIA----SSQAVSMFASPCSKAT 442
BLAST of Lag0008831 vs. ExPASy TrEMBL
Match:
A0A5J4ZPW7 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_014124 PE=4 SV=1)
HSP 1 Score: 226.5 bits (576), Expect = 1.9e-55
Identity = 147/380 (38.68%), Postives = 213/380 (56.05%), Query Frame = 0
Query: 18 NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
+H + + W LE+ FS+STR+NI+ LK+ L +ISK ++ID+Y+ + K+ + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196
Query: 78 AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
A+VS++I+ ED++ Y +NGLP YN FKTS+RT+S++++ +E++ ++K EE T+E K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
++ MA N G+ GRG G G F N GR GR G
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316
Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
L + P + S+ P + +I Q + P +LTAM
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376
Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
SA+ NT S N W TD G H+T +LANLN Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436
Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
SH G + +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496
BLAST of Lag0008831 vs. ExPASy TrEMBL
Match:
A0A5J5A1U7 (Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_010692 PE=4 SV=1)
HSP 1 Score: 225.7 bits (574), Expect = 3.3e-55
Identity = 147/380 (38.68%), Postives = 213/380 (56.05%), Query Frame = 0
Query: 18 NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
+H + + W LE+ FS+STR+NI+ LK+ L +ISK ++ID+Y+ + K+ + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196
Query: 78 AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
A+VS++I+ ED++ Y +NGLP YN FKTS+RT+S++++ +E++ ++K EE T+E K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
++ MA N G+ GRG G G F N GR GR G
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316
Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
L + P + S+ P + +I Q + P +LTAM
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376
Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
SA+ NT S N W TD G H+T +LANLN Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436
Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
SH G + +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496
BLAST of Lag0008831 vs. ExPASy TrEMBL
Match:
A0A5J5B049 (Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_030285 PE=4 SV=1)
HSP 1 Score: 224.9 bits (572), Expect = 5.6e-55
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0
Query: 18 NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
+H + + W LE+ FS+STR+NI+ LK+ L +ISK ++ID+Y+ + K + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKRARDSL 196
Query: 78 AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
A+VS++I+ ED++ Y +NGLP YN FKTS+RT+S++++ +E++ ++K EE T+E K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
++ MA N G+ GRG G G F N GR GR G
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316
Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
L + P + S+ P + +I Q + P +LTAM
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376
Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
SA+ NT S N W TD G H+T +LANLN Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436
Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
SH G + +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496
BLAST of Lag0008831 vs. ExPASy TrEMBL
Match:
A0A5J4ZHB6 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_016793 PE=4 SV=1)
HSP 1 Score: 224.2 bits (570), Expect = 9.5e-55
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0
Query: 18 NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
+H + + W LE+ FS+STR+NI+ LK+ L +ISK ++ID+Y+ + K+ + L
Sbjct: 137 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 196
Query: 78 AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
A+VS++I+ ED++ Y +NGLP YN FKTS+RT+S++++ +E++ ++K EE T+E K
Sbjct: 197 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 256
Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
++ MA N G+ GRG G G F N GR GR G
Sbjct: 257 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 316
Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
L + P + S+ P + +I Q + P +LTAM
Sbjct: 317 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 376
Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
SA+ NT S N W TD G H+T +LANLN Y GD+NIT+ NGQ+L I
Sbjct: 377 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 436
Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
SH G + +D TF L+N+L VP + TNLLSVHQFC D++C FIFDS F IQDK + Q
Sbjct: 437 SHSGQSSIHANDHTFRLNNVLCVPFMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 496
BLAST of Lag0008831 vs. ExPASy TrEMBL
Match:
A0A5J4ZT09 (Flavin-containing monooxygenase OS=Nyssa sinensis OX=561372 GN=F0562_012811 PE=3 SV=1)
HSP 1 Score: 223.0 bits (567), Expect = 2.1e-54
Identity = 147/380 (38.68%), Postives = 212/380 (55.79%), Query Frame = 0
Query: 18 NHCASILSMKSVWDTLEKHFSSSTRTNIISLKTELQSISKQSGETIDAYVCRGKEIVNKL 77
+H + + W LE+ FS+STR+NI+ LK+ L +ISK ++ID+Y+ + K+ + L
Sbjct: 443 SHVIGYSTSREAWLALERRFSASTRSNILQLKSALHNISK-GKDSIDSYIQKIKQARDSL 502
Query: 78 AAVSIVIDVEDLITYTINGLPSTYNIFKTSLRTRSQSLSFDELHILMKTEEMTLEKQSKV 137
A+VS++I+ ED++ Y +NGLP YN FKTS+RT+S++++ +E++ ++K EE T+E K
Sbjct: 503 ASVSVLIEDEDILIYVLNGLPQEYNAFKTSIRTKSENITLEEVYAMLKIEEQTIESVHKQ 562
Query: 138 EDATTVSHLAMAVNLES--QGRGGWRQQGTRGRGTGGGCFDNSRGR----GR------GG 197
++ MA N G+ GRG G G F N GR GR G
Sbjct: 563 NNSPPFPGAMMATNYRPNFSSNRGYSPSNFSGRGRGRGRFSNRGGRMHSFGRFQSPNFGQ 622
Query: 198 VTL-FLWAIPMVLVKVSSRLLPSLDRI-------------------QARHPPTKLTAMDA 257
L + P + S+ P + +I Q + P +LTAM
Sbjct: 623 SNLPYPTKQPQQSNQRSNNSHPVVCQICNKNGHSALDCYHRMDFSYQGKPPSPQLTAM-- 682
Query: 258 SASSNTNGFTSGTLPQDSNVWLTDIGCNAHLTNELANLNVSTAYNGDENITVGNGQSLSI 317
SA+ NT S N W TD G H+T +LANLN Y GD+NIT+ NGQ+L I
Sbjct: 683 SATYNTGSDCS------PNYWYTDTGATNHITADLANLNFPVEYQGDDNITIANGQALDI 742
Query: 318 SHVGSGQLSLSDKTFNLSNLLRVPNITTNLLSVHQFCTDSNCLFIFDSFSFTIQDKTSGQ 366
SH G + +D TF L+N+L VP++ TNLLSVHQFC D++C FIFDS F IQDK + Q
Sbjct: 743 SHSGQSSIHANDHTFILNNVLCVPSMATNLLSVHQFCKDNHCRFIFDSEMFQIQDKATKQ 802
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q94HW2 | 7.3e-20 | 25.81 | Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O... | [more] |
Q9ZT94 | 1.3e-11 | 22.78 | Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O... | [more] |
Match Name | E-value | Identity | Description | |
A0A5J4ZPW7 | 1.9e-55 | 38.68 | Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_0... | [more] |
A0A5J5A1U7 | 3.3e-55 | 38.68 | Integrase catalytic domain-containing protein OS=Nyssa sinensis OX=561372 GN=F05... | [more] |
A0A5J5B049 | 5.6e-55 | 38.68 | Retrotran_gag_3 domain-containing protein OS=Nyssa sinensis OX=561372 GN=F0562_0... | [more] |
A0A5J4ZHB6 | 9.5e-55 | 38.68 | Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_016793 PE=4 SV=1 | [more] |
A0A5J4ZT09 | 2.1e-54 | 38.68 | Flavin-containing monooxygenase OS=Nyssa sinensis OX=561372 GN=F0562_012811 PE=3... | [more] |
Match Name | E-value | Identity | Description | |