Lag0008791 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008791
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon RE1
Locationchr9: 30200238 .. 30203488 (-)
RNA-Seq ExpressionLag0008791
SyntenyLag0008791
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCAAGCTGAAGTCTGCAAGTTGAAGTTGGTCGCGAAGAGGAAGAAAACTGAGAAGATCTTGTTGAATCACACCGTGGTTGACGGGGAAAATCACGTCGTGGCTTTGAATCATGTCATTCGTCCTCGCGAAAATCTTGCTTCACGCTGAAGCTAGAACGTGGTCTGAAACGAAACCCAGATTTGGAACGAAGGGGATTTCCCCTTCGTTTCAGACCGGAATCGAAGGGGAAACGGTGGCCACGACGTTTTAGATCTGGTCGATGACGATTCACGATTCAGTGAATTCGTGAAGTTCGTGCATTCGTCTTGTGGTCGGCGATTCACGATTTGGCGATTCGACGACAAGTTCGTGTTTTAGATCTAGTTGGCGATTCACGATTCAGTGAGTTCGTCTTGTGGTTGTAGAGCCACAATGGAGTTCGTGCGTTCGTGGCCTCGTGTCCAGATTCGACGGCGAGTTCGTGAGTTGGTAACGGTTCGGCGCTTTAGATCTGGTTAGCGAGATCGTGGAGTTTCTTCAAGTTAAAGGTGAAAAAAAAAGGTTCGCCGGCGGCGGCCTGCCGCGCCAGTCGGTGTTGAGTAGTCGTCGGAGACAAGTTGAAAATGAGGAAAAAGAAGGAGTTAGGGTAAAAGGTGGAAGAAGAAGGAGTTAGGGTAAAAGGTGGAAGGAAGAGGAGGGAAAGAAATAAAAAAAATATATATATATAAAATAATATAATAATATATATTTATTATTTTATTATATTTATATTTTTAAAAACTTTAAAAATAATTTTTTTAATAAAAAAAAATTTGCCATGTCAACAATCCGTTAACTTTTAACGGAAAATTCGATACAGGGACCAAAATGAAACTAAAATCAAACCTCAGGGACTAAATTGTTGAGTTTGAAAACTCAAGGACAAAAATGAAACATAACCTAAATCTCAGGGACTAAAAGTGTATTTTTCCCTAAAATAAAATAGAGTGAAATTTAATAATGGAAAATATTGATTTAGTCCTTCATAAGGTTAAGATTCAACTTGGATAAACTTGTAAAAAAAAAAAAAAATCAACTTGATAAAATTGAAATTAAGTTTAGATCTTATAAAAAAAAAAGGAAAAAAATTATTCTTCTTTTATATTATTAACTAGTGACAATAAAAATTTAGTTGAAATAAATTTTATAGATGAGTTAGAATTGAAAATTTAAGAGATTGGATAAAAATTGAAAAAAGATACAAATACTAGGAACAATTTTATATACCTATAACCAAATTAATTTATTCTAAAATATATTGAAAATACGATGTGACACCCTTCACTATCTATACTCCCCGAATGATTGAAGGAGACCTTTCATAACATTCCATTTCATGCTCCACAATTTTGTTGAAATCGATTGAACAATTATCTAAATATTTAAGGAATATATTAAGTGCTTTTCTAAAAAAGAAAAAAAAGAATATATTAAGTGATCTAAAATTATGGATCTATGAAATTCTCACTAAAAAGTGCGATCAATGAATTAATAACAATCTTGTGGAGATCATTAAGAATGTTATGAGACTCTAGAATCAACCCTATAAATTTAAGTACATTAGGTATATTCTGTTAGTTATCCCAATTAAAAAATGAGTGTCGTTCTAACATTGCTTGTTCCCATTAGAAGTTGAGGTTCGTTCTTACGAAATTTGAGGTAGTTAGTTGATGAAAACTTCCCTCTCATTTGTGGTTGGCTGATCTATGGACAAAAAATCTATGATAATGGATATAGTTAGGATGGTTTCTTTCTACTATTATGATTCAAACAAGTACAATATATTTGAATATTTTAGTTCTAAAAAGATTCACATAACAAGAAGAAAAATAAAGCAAAAAAATAAAAATAAAAAATAAAAAAGTAAAAATCAAATTGGATGGGTGGCTCTTTCTTAACAGAAGGGGGCATGCAATTGGTCAAGATCATGAGGTTTTCCAATCTGTACTGTTTGTCTAAAAATTGTATCCAATAAAATTATAGATTAGATTGGGATTTGCAAATTGAAGTTTAATAGTCAAAGGGAATCTTACTTTTTAATGCATGAAAAATTCTTTGATACATTAAAAAAAAGAATTATTGTGCTTTTTCATGTATAAATAAAGTTTTGTGTCCAAACATTGTTGTAAGCTTTTCCACCGTCTAAAGCCTTTTGCTTTTAAATATTCCAATTCATTTTTTAAACAATGATTGGCCTAATTCCACAATATTTCTCACATCTCAACATTTTACAATTTTTATTTAGCATCTTAATTTTCATTTAACTTTTCATATTTATTTTGTTTTTTTTTTAAATATTTTAAAATGCTTTGATATAGTCTTGTTAGCTTAATTAATCTGTCTTAAGTTGGGTATTATTTCTTTGTAATTGTTATTGCCTTTCTGTTATTTTCCTCCCTATGATGTACAAACACGTGGCTTATTCTTCTGTTATTTAATATCAGTGTGCGTGCTCACTGTTCATCAGGTTGAGCAATTATTCTTATTATTCCTCTCTGAAATTCTTGACATTTTATGGTATCAGAGCTTATTGGTTCTTCATCTATGGCGTCTCCTTCAAGTTCTTCAGCCTTAGTCTTCGACGGAATTTCGGTCATATCCTCTTCCACCACTCAACCTGTTATTTCTCCTATTTCTTCCCCTTCTTCTTCTCAACGCTTAAACCTTAATCCCCAAACCCCTTATCGAACACCCAAACCAGACCTCTCAACCCTCATGTCCCTCCTTTTTCGACTGGTGTCAATTCCAGTTTTCTTCCTCATCCCAACATTACAAATCAACCCCGTGGTCCTGCTGCTCCTACAGGATTCGCTTACCCTCCAGCTCCCTCGCCTATGTTACCATTTTTCCGGCGTATAATTCGAACCCTCCTATTTTTCCTCAAATCCTGTAACACCCCTCCCTTTCCATCTCTGACCCCTCCCCTCAACATTAAGCTCTCTGATTCGAACTACTTACTGTGGAAGAATCAACTGCTAAATCACATTATAGCCTTTGATTTGGAATCGTTCATTGATGGCACACCTGCTCCACCGCAAGAAAATCCCCAATTTACTCTTTGGCAAAAATATAATAGAATTCTTATGAGTTGGATGTACTCTTCCTTGAATGAGGACAAACTCGGTGAAATTATTGGGTGTTCTTCTGCTTTCGATATTTGGGATCATCTCCGTACTGTCTATGAATCAGCTTCCACCGCAAGAATTATGGGTATTTGGTCTCAACTTTAG

mRNA sequence

ATGCAAGCTGAAGTCTGCAAGTTGAAGTTGGTCGCGAAGAGGAAGAAAACTGAGAAGATCTTGTTGAATCACACCGTGGTTGACGGGGAAAATCACGTCGTGGCTTTGAATCATATTTGGAACGAAGGGGATTTCCCCTTCGTTTCAGACCGGAATCGAAGGGGAAACGGTGGCCACGACGTTTTAGATCTGGTCGATGACGATTCACGATTCAGTGAATTCGTGAAGTTCGTGCATTCGTCTTGTGGTCGGCGATTCACGATTTGGCGATTCGACGACAAAGCCACAATGGAGTTCGTGCGTTCGTGGCCTCGTGTCCAGATTCGACGGCGAGTTCGTGAGTTGGTAACGGTTCGGCGCTTTAGATCTGTGTGCGTGCTCACTGTTCATCAGGTTGAGCAATTATTCTTATTATTCCTCTCTGAAATTCTTGACATTTTATGTTTTCTTCCTCATCCCAACATTACAAATCAACCCCGTGGTCCTGCTGCTCCTACAGGATTCGCTTACCCTCCAGCTCCCTCGCCTATGTTACCATTTTTCCGGCGTATAATTCGAACCCTCCTATTTTTCCTCAAATCCTGTAACACCCCTCCCTTTCCATCTCTGACCCCTCCCCTCAACATTAAGCTCTCTGATTCGAACTACTTACTGTGGAAGAATCAACTGCTAAATCACATTATAGCCTTTGATTTGGAATCGTTCATTGATGGCACACCTGCTCCACCGCAAGAAAATCCCCAATTTACTCTTTGGCAAAAATATAATAGAATTCTTATGAGTTGGATGTACTCTTCCTTGAATGAGGACAAACTCGGTGAAATTATTGGGTGTTCTTCTGCTTTCGATATTTGGGATCATCTCCGTACTGTCTATGAATCAGCTTCCACCGCAAGAATTATGGGTATTTGGTCTCAACTTTAG

Coding sequence (CDS)

ATGCAAGCTGAAGTCTGCAAGTTGAAGTTGGTCGCGAAGAGGAAGAAAACTGAGAAGATCTTGTTGAATCACACCGTGGTTGACGGGGAAAATCACGTCGTGGCTTTGAATCATATTTGGAACGAAGGGGATTTCCCCTTCGTTTCAGACCGGAATCGAAGGGGAAACGGTGGCCACGACGTTTTAGATCTGGTCGATGACGATTCACGATTCAGTGAATTCGTGAAGTTCGTGCATTCGTCTTGTGGTCGGCGATTCACGATTTGGCGATTCGACGACAAAGCCACAATGGAGTTCGTGCGTTCGTGGCCTCGTGTCCAGATTCGACGGCGAGTTCGTGAGTTGGTAACGGTTCGGCGCTTTAGATCTGTGTGCGTGCTCACTGTTCATCAGGTTGAGCAATTATTCTTATTATTCCTCTCTGAAATTCTTGACATTTTATGTTTTCTTCCTCATCCCAACATTACAAATCAACCCCGTGGTCCTGCTGCTCCTACAGGATTCGCTTACCCTCCAGCTCCCTCGCCTATGTTACCATTTTTCCGGCGTATAATTCGAACCCTCCTATTTTTCCTCAAATCCTGTAACACCCCTCCCTTTCCATCTCTGACCCCTCCCCTCAACATTAAGCTCTCTGATTCGAACTACTTACTGTGGAAGAATCAACTGCTAAATCACATTATAGCCTTTGATTTGGAATCGTTCATTGATGGCACACCTGCTCCACCGCAAGAAAATCCCCAATTTACTCTTTGGCAAAAATATAATAGAATTCTTATGAGTTGGATGTACTCTTCCTTGAATGAGGACAAACTCGGTGAAATTATTGGGTGTTCTTCTGCTTTCGATATTTGGGATCATCTCCGTACTGTCTATGAATCAGCTTCCACCGCAAGAATTATGGGTATTTGGTCTCAACTTTAG

Protein sequence

MQAEVCKLKLVAKRKKTEKILLNHTVVDGENHVVALNHIWNEGDFPFVSDRNRRGNGGHDVLDLVDDDSRFSEFVKFVHSSCGRRFTIWRFDDKATMEFVRSWPRVQIRRRVRELVTVRRFRSVCVLTVHQVEQLFLLFLSEILDILCFLPHPNITNQPRGPAAPTGFAYPPAPSPMLPFFRRIIRTLLFFLKSCNTPPFPSLTPPLNIKLSDSNYLLWKNQLLNHIIAFDLESFIDGTPAPPQENPQFTLWQKYNRILMSWMYSSLNEDKLGEIIGCSSAFDIWDHLRTVYESASTARIMGIWSQL
Homology
BLAST of Lag0008791 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia])

HSP 1 Score: 136.0 bits (341), Expect = 5.6e-28
Identity = 60/118 (50.85%), Postives = 84/118 (71.19%), Query Frame = 0

Query: 199 PFPSLTPPLNIKLSDSNYLLWKNQLLNHIIAFDLESFIDGTPAPP---------QENPQF 258
           PFP+L  PLN+KL+D+N+LLWKNQLLN +IA  L  ++DGT  PP         Q NP +
Sbjct: 22  PFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDGTIMPPPQFLDHHQLQPNPAY 81

Query: 259 TLWQKYNRILMSWMYSSLNEDKLGEIIGCSSAFDIWDHLRTVYESASTARIMGIWSQL 308
             W++YNR+LM W+YSSL+E+K+GE++   +  DIW  L  VY+S +TARIMG+ ++L
Sbjct: 82  YAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLTRVYDSKTTARIMGLKTEL 139

BLAST of Lag0008791 vs. NCBI nr
Match: GFY85402.1 (hypothetical protein Acr_04g0001400 [Actinidia rufa])

HSP 1 Score: 119.8 bits (299), Expect = 4.2e-23
Identity = 63/154 (40.91%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 156 TNQPRGPAAPTGFAYPPAPSPMLPFFRRIIRTLLFFLKSCNTPPFPSLTPPLNIKLSDSN 215
           T+    P AP      P PS  +P     I      L +   P  PS+  PL +KL D N
Sbjct: 6   TDSASTPPAPPPPTSNPLPSSSIPNPNPQI------LNTSPLPNMPSINQPLAVKLDDHN 65

Query: 216 YLLWKNQLLNHIIAFDLESFIDGT---------PAPPQENPQFTLWQKYNRILMSWMYSS 275
           Y++WK QLLN +IA  LE F+DG+         P   Q NP+F  WQ+YNR++MSW+Y+S
Sbjct: 66  YIIWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYAS 125

Query: 276 LNEDKLGEIIGCSSAFDIWDHLRTVYESASTARI 301
           +NE  LG+I+G +SA  IW+ L  +Y +AS A +
Sbjct: 126 INESMLGQIVGYTSASQIWEALERLYAAASFAHL 153

BLAST of Lag0008791 vs. NCBI nr
Match: GFZ12741.1 (UBX domain-containing protein [Actinidia rufa])

HSP 1 Score: 118.2 bits (295), Expect = 1.2e-22
Identity = 63/161 (39.13%), Postives = 88/161 (54.66%), Query Frame = 0

Query: 156 TNQPRGPAAPTGFAYP----PAPSPMLPFFRRIIRTLLFFLKSCNTPP---FPSLTPPLN 215
           ++ P  P  PT    P    P P+P +                 NT P    PS+  PL 
Sbjct: 9   SSTPPAPPPPTSNPLPSSSIPKPNPQI----------------INTSPLLNMPSINQPLA 68

Query: 216 IKLSDSNYLLWKNQLLNHIIAFDLESFIDGT---------PAPPQENPQFTLWQKYNRIL 275
           +KL D NY++WK QLLN +IA  LE F+DG+         P   Q NP+F  WQ+YNR++
Sbjct: 69  VKLDDHNYIIWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLV 128

Query: 276 MSWMYSSLNEDKLGEIIGCSSAFDIWDHLRTVYESASTARI 301
           MSW+Y+S+NE  LG+I+G +SA  IW+ L  +Y +AS A +
Sbjct: 129 MSWIYASINESMLGQIVGYTSASQIWEALERLYAAASFAHL 153

BLAST of Lag0008791 vs. NCBI nr
Match: PON47862.1 (hypothetical protein TorRG33x02_321990 [Trema orientale])

HSP 1 Score: 117.1 bits (292), Expect = 2.7e-22
Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 0

Query: 198 PPFPSLTPPLNIKLSDSNYLLWKNQLLNHIIAFDLESFIDGT-PAPPQ--------ENPQ 257
           P  PS+  P  IKL   NYL+WKNQLLN IIA  LE FIDG+ P PP+         N +
Sbjct: 43  PILPSMNQPFTIKLDADNYLIWKNQLLNVIIANGLEDFIDGSRPCPPRFTDPARQIVNAE 102

Query: 258 FTLWQKYNRILMSWMYSSLNEDKLGEIIGCSSAFDIWDHLRTVYESASTARIMGIWSQL 308
           +  WQ++NR++MSW+Y+SL +  +G+I+G +SAF+IW+ L  +Y S+S A+I  + ++L
Sbjct: 103 YIAWQRFNRLIMSWIYASLTQGVMGQIVGYASAFEIWEALNQIYTSSSLAKITELRAKL 161

BLAST of Lag0008791 vs. NCBI nr
Match: CAN83798.1 (hypothetical protein VITISV_039072 [Vitis vinifera])

HSP 1 Score: 104.0 bits (258), Expect = 2.4e-18
Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 0

Query: 197 TPPFPSLTPPLNIKLSDSNYLLWKNQLLNHIIAFDLESFIDGTPAPP---------QENP 256
           T P PSL+  L+IKL ++N LL K+QLLN IIA  LE FID   + P         Q NP
Sbjct: 30  TLPSPSLSQSLSIKLDETNLLLXKSQLLNXIIANGLEDFIDPDQSSPPKYLDAACXQVNP 89

Query: 257 QFTLWQKYNRILMSWMYSSLNEDKLGEIIGCSSAFDIWDHLRTVYESASTARIMGIWSQL 308
           +F  W + N ++MSW+YSSL    +G+I+  S+A DIW  L   YES S A +M + SQL
Sbjct: 90  EFVQWDRLNXLVMSWIYSSLTPGMVGQIVEXSTARDIWASLNDEYESPSIATVMSLNSQL 149

BLAST of Lag0008791 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 2.7e-28
Identity = 60/118 (50.85%), Postives = 84/118 (71.19%), Query Frame = 0

Query: 199 PFPSLTPPLNIKLSDSNYLLWKNQLLNHIIAFDLESFIDGTPAPP---------QENPQF 258
           PFP+L  PLN+KL+D+N+LLWKNQLLN +IA  L  ++DGT  PP         Q NP +
Sbjct: 22  PFPTLPQPLNVKLNDNNFLLWKNQLLNAVIANGLRGYLDGTIMPPPQFLDHHQLQPNPAY 81

Query: 259 TLWQKYNRILMSWMYSSLNEDKLGEIIGCSSAFDIWDHLRTVYESASTARIMGIWSQL 308
             W++YNR+LM W+YSSL+E+K+GE++   +  DIW  L  VY+S +TARIMG+ ++L
Sbjct: 82  YAWERYNRLLMCWIYSSLSEEKMGEVVSLETTHDIWSSLTRVYDSKTTARIMGLKTEL 139

BLAST of Lag0008791 vs. ExPASy TrEMBL
Match: A0A7J0EGI5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23
Identity = 63/154 (40.91%), Postives = 87/154 (56.49%), Query Frame = 0

Query: 156 TNQPRGPAAPTGFAYPPAPSPMLPFFRRIIRTLLFFLKSCNTPPFPSLTPPLNIKLSDSN 215
           T+    P AP      P PS  +P     I      L +   P  PS+  PL +KL D N
Sbjct: 6   TDSASTPPAPPPPTSNPLPSSSIPNPNPQI------LNTSPLPNMPSINQPLAVKLDDHN 65

Query: 216 YLLWKNQLLNHIIAFDLESFIDGT---------PAPPQENPQFTLWQKYNRILMSWMYSS 275
           Y++WK QLLN +IA  LE F+DG+         P   Q NP+F  WQ+YNR++MSW+Y+S
Sbjct: 66  YIIWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLVMSWIYAS 125

Query: 276 LNEDKLGEIIGCSSAFDIWDHLRTVYESASTARI 301
           +NE  LG+I+G +SA  IW+ L  +Y +AS A +
Sbjct: 126 INESMLGQIVGYTSASQIWEALERLYAAASFAHL 153

BLAST of Lag0008791 vs. ExPASy TrEMBL
Match: A0A7J0GPN0 (UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 5.9e-23
Identity = 63/161 (39.13%), Postives = 88/161 (54.66%), Query Frame = 0

Query: 156 TNQPRGPAAPTGFAYP----PAPSPMLPFFRRIIRTLLFFLKSCNTPP---FPSLTPPLN 215
           ++ P  P  PT    P    P P+P +                 NT P    PS+  PL 
Sbjct: 9   SSTPPAPPPPTSNPLPSSSIPKPNPQI----------------INTSPLLNMPSINQPLA 68

Query: 216 IKLSDSNYLLWKNQLLNHIIAFDLESFIDGT---------PAPPQENPQFTLWQKYNRIL 275
           +KL D NY++WK QLLN +IA  LE F+DG+         P   Q NP+F  WQ+YNR++
Sbjct: 69  VKLDDHNYIIWKEQLLNIVIANGLEEFLDGSRVCPPRFLDPQQQQSNPEFHSWQRYNRLV 128

Query: 276 MSWMYSSLNEDKLGEIIGCSSAFDIWDHLRTVYESASTARI 301
           MSW+Y+S+NE  LG+I+G +SA  IW+ L  +Y +AS A +
Sbjct: 129 MSWIYASINESMLGQIVGYTSASQIWEALERLYAAASFAHL 153

BLAST of Lag0008791 vs. ExPASy TrEMBL
Match: A0A2P5BGF8 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV=1)

HSP 1 Score: 117.1 bits (292), Expect = 1.3e-22
Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 0

Query: 198 PPFPSLTPPLNIKLSDSNYLLWKNQLLNHIIAFDLESFIDGT-PAPPQ--------ENPQ 257
           P  PS+  P  IKL   NYL+WKNQLLN IIA  LE FIDG+ P PP+         N +
Sbjct: 43  PILPSMNQPFTIKLDADNYLIWKNQLLNVIIANGLEDFIDGSRPCPPRFTDPARQIVNAE 102

Query: 258 FTLWQKYNRILMSWMYSSLNEDKLGEIIGCSSAFDIWDHLRTVYESASTARIMGIWSQL 308
           +  WQ++NR++MSW+Y+SL +  +G+I+G +SAF+IW+ L  +Y S+S A+I  + ++L
Sbjct: 103 YIAWQRFNRLIMSWIYASLTQGVMGQIVGYASAFEIWEALNQIYTSSSLAKITELRAKL 161

BLAST of Lag0008791 vs. ExPASy TrEMBL
Match: A5C0U6 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_039072 PE=4 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 1.1e-18
Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 0

Query: 197 TPPFPSLTPPLNIKLSDSNYLLWKNQLLNHIIAFDLESFIDGTPAPP---------QENP 256
           T P PSL+  L+IKL ++N LL K+QLLN IIA  LE FID   + P         Q NP
Sbjct: 30  TLPSPSLSQSLSIKLDETNLLLXKSQLLNXIIANGLEDFIDPDQSSPPKYLDAACXQVNP 89

Query: 257 QFTLWQKYNRILMSWMYSSLNEDKLGEIIGCSSAFDIWDHLRTVYESASTARIMGIWSQL 308
           +F  W + N ++MSW+YSSL    +G+I+  S+A DIW  L   YES S A +M + SQL
Sbjct: 90  EFVQWDRLNXLVMSWIYSSLTPGMVGQIVEXSTARDIWASLNDEYESPSIATVMSLNSQL 149

BLAST of Lag0008791 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 8.1e-09
Identity = 30/103 (29.13%), Postives = 53/103 (51.46%), Query Frame = 0

Query: 206 PLNIKLSDSNYLLWKNQLLNHIIAFDLESFIDGTPAPPQENPQFTLWQKYNRILMSWMYS 265
           P+ + + +SNY  W+   L H ++FD+   IDGT  P   N     WQK + I+   +Y 
Sbjct: 21  PVMLDIEESNYDAWRELFLTHCLSFDVMGHIDGTLLPTNAND--VNWQKRDGIVKLSLYG 80

Query: 266 SLNEDKL-GEIIGCSSAFDIWDHLRTVYESASTARIMGIWSQL 308
           +L   +  G  +  S++ DIW  ++  + +   AR + + S+L
Sbjct: 81  TLTPKQFQGSFVTSSTSRDIWLRIKNQFRNNKDARALRLDSEL 121

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155181.15.6e-2850.85uncharacterized protein LOC111022315 [Momordica charantia][more]
GFY85402.14.2e-2340.91hypothetical protein Acr_04g0001400 [Actinidia rufa][more]
GFZ12741.11.2e-2239.13UBX domain-containing protein [Actinidia rufa][more]
PON47862.12.7e-2246.22hypothetical protein TorRG33x02_321990 [Trema orientale][more]
CAN83798.12.4e-1846.67hypothetical protein VITISV_039072 [Vitis vinifera][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DQX72.7e-2850.85uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A7J0EGI52.0e-2340.91Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1[more]
A0A7J0GPN05.9e-2339.13UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4... [more]
A0A2P5BGF81.3e-2246.22Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV... [more]
A5C0U61.1e-1846.67Reverse transcriptase Ty1/copia-type domain-containing protein OS=Vitis vinifera... [more]
Match NameE-valueIdentityDescription
AT1G34070.18.1e-0929.13CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BE... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14223Retrotran_gag_2coord: 252..307
e-value: 1.3E-6
score: 28.2
NoneNo IPR availablePANTHERPTHR47481FAMILY NOT NAMEDcoord: 196..303
NoneNo IPR availablePANTHERPTHR47481:SF3GAG-POLYPEPTIDE OF LTR COPIA-TYPE-RELATEDcoord: 196..303

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008791.1Lag0008791.1mRNA