Lag0008791 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCAAGCTGAAGTCTGCAAGTTGAAGTTGGTCGCGAAGAGGAAGAAAACTGAGAAGATCTTGTTGAATCACACCGTGGTTGACGGGGAAAATCACGTCGTGGCTTTGAATCATGTCATTCGTCCTCGCGAAAATCTTGCTTCACGCTGAAGCTAGAACGTGGTCTGAAACGAAACCCAGATTTGGAACGAAGGGGATTTCCCCTTCGTTTCAGACCGGAATCGAAGGGGAAACGGTGGCCACGACGTTTTAGATCTGGTCGATGACGATTCACGATTCAGTGAATTCGTGAAGTTCGTGCATTCGTCTTGTGGTCGGCGATTCACGATTTGGCGATTCGACGACAAGTTCGTGTTTTAGATCTAGTTGGCGATTCACGATTCAGTGAGTTCGTCTTGTGGTTGTAGAGCCACAATGGAGTTCGTGCGTTCGTGGCCTCGTGTCCAGATTCGACGGCGAGTTCGTGAGTTGGTAACGGTTCGGCGCTTTAGATCTGGTTAGCGAGATCGTGGAGTTTCTTCAAGTTAAAGGTGAAAAAAAAAGGTTCGCCGGCGGCGGCCTGCCGCGCCAGTCGGTGTTGAGTAGTCGTCGGAGACAAGTTGAAAATGAGGAAAAAGAAGGAGTTAGGGTAAAAGGTGGAAGAAGAAGGAGTTAGGGTAAAAGGTGGAAGGAAGAGGAGGGAAAGAAATAAAAAAAATATATATATATAAAATAATATAATAATATATATTTATTATTTTATTATATTTATATTTTTAAAAACTTTAAAAATAATTTTTTTAATAAAAAAAAATTTGCCATGTCAACAATCCGTTAACTTTTAACGGAAAATTCGATACAGGGACCAAAATGAAACTAAAATCAAACCTCAGGGACTAAATTGTTGAGTTTGAAAACTCAAGGACAAAAATGAAACATAACCTAAATCTCAGGGACTAAAAGTGTATTTTTCCCTAAAATAAAATAGAGTGAAATTTAATAATGGAAAATATTGATTTAGTCCTTCATAAGGTTAAGATTCAACTTGGATAAACTTGTAAAAAAAAAAAAAAATCAACTTGATAAAATTGAAATTAAGTTTAGATCTTATAAAAAAAAAAGGAAAAAAATTATTCTTCTTTTATATTATTAACTAGTGACAATAAAAATTTAGTTGAAATAAATTTTATAGATGAGTTAGAATTGAAAATTTAAGAGATTGGATAAAAATTGAAAAAAGATACAAATACTAGGAACAATTTTATATACCTATAACCAAATTAATTTATTCTAAAATATATTGAAAATACGATGTGACACCCTTCACTATCTATACTCCCCGAATGATTGAAGGAGACCTTTCATAACATTCCATTTCATGCTCCACAATTTTGTTGAAATCGATTGAACAATTATCTAAATATTTAAGGAATATATTAAGTGCTTTTCTAAAAAAGAAAAAAAAGAATATATTAAGTGATCTAAAATTATGGATCTATGAAATTCTCACTAAAAAGTGCGATCAATGAATTAATAACAATCTTGTGGAGATCATTAAGAATGTTATGAGACTCTAGAATCAACCCTATAAATTTAAGTACATTAGGTATATTCTGTTAGTTATCCCAATTAAAAAATGAGTGTCGTTCTAACATTGCTTGTTCCCATTAGAAGTTGAGGTTCGTTCTTACGAAATTTGAGGTAGTTAGTTGATGAAAACTTCCCTCTCATTTGTGGTTGGCTGATCTATGGACAAAAAATCTATGATAATGGATATAGTTAGGATGGTTTCTTTCTACTATTATGATTCAAACAAGTACAATATATTTGAATATTTTAGTTCTAAAAAGATTCACATAACAAGAAGAAAAATAAAGCAAAAAAATAAAAATAAAAAATAAAAAAGTAAAAATCAAATTGGATGGGTGGCTCTTTCTTAACAGAAGGGGGCATGCAATTGGTCAAGATCATGAGGTTTTCCAATCTGTACTGTTTGTCTAAAAATTGTATCCAATAAAATTATAGATTAGATTGGGATTTGCAAATTGAAGTTTAATAGTCAAAGGGAATCTTACTTTTTAATGCATGAAAAATTCTTTGATACATTAAAAAAAAGAATTATTGTGCTTTTTCATGTATAAATAAAGTTTTGTGTCCAAACATTGTTGTAAGCTTTTCCACCGTCTAAAGCCTTTTGCTTTTAAATATTCCAATTCATTTTTTAAACAATGATTGGCCTAATTCCACAATATTTCTCACATCTCAACATTTTACAATTTTTATTTAGCATCTTAATTTTCATTTAACTTTTCATATTTATTTTGTTTTTTTTTTAAATATTTTAAAATGCTTTGATATAGTCTTGTTAGCTTAATTAATCTGTCTTAAGTTGGGTATTATTTCTTTGTAATTGTTATTGCCTTTCTGTTATTTTCCTCCCTATGATGTACAAACACGTGGCTTATTCTTCTGTTATTTAATATCAGTGTGCGTGCTCACTGTTCATCAGGTTGAGCAATTATTCTTATTATTCCTCTCTGAAATTCTTGACATTTTATGGTATCAGAGCTTATTGGTTCTTCATCTATGGCGTCTCCTTCAAGTTCTTCAGCCTTAGTCTTCGACGGAATTTCGGTCATATCCTCTTCCACCACTCAACCTGTTATTTCTCCTATTTCTTCCCCTTCTTCTTCTCAACGCTTAAACCTTAATCCCCAAACCCCTTATCGAACACCCAAACCAGACCTCTCAACCCTCATGTCCCTCCTTTTTCGACTGGTGTCAATTCCAGTTTTCTTCCTCATCCCAACATTACAAATCAACCCCGTGGTCCTGCTGCTCCTACAGGATTCGCTTACCCTCCAGCTCCCTCGCCTATGTTACCATTTTTCCGGCGTATAATTCGAACCCTCCTATTTTTCCTCAAATCCTGTAACACCCCTCCCTTTCCATCTCTGACCCCTCCCCTCAACATTAAGCTCTCTGATTCGAACTACTTACTGTGGAAGAATCAACTGCTAAATCACATTATAGCCTTTGATTTGGAATCGTTCATTGATGGCACACCTGCTCCACCGCAAGAAAATCCCCAATTTACTCTTTGGCAAAAATATAATAGAATTCTTATGAGTTGGATGTACTCTTCCTTGAATGAGGACAAACTCGGTGAAATTATTGGGTGTTCTTCTGCTTTCGATATTTGGGATCATCTCCGTACTGTCTATGAATCAGCTTCCACCGCAAGAATTATGGGTATTTGGTCTCAACTTTAG ATGCAAGCTGAAGTCTGCAAGTTGAAGTTGGTCGCGAAGAGGAAGAAAACTGAGAAGATCTTGTTGAATCACACCGTGGTTGACGGGGAAAATCACGTCGTGGCTTTGAATCATATTTGGAACGAAGGGGATTTCCCCTTCGTTTCAGACCGGAATCGAAGGGGAAACGGTGGCCACGACGTTTTAGATCTGGTCGATGACGATTCACGATTCAGTGAATTCGTGAAGTTCGTGCATTCGTCTTGTGGTCGGCGATTCACGATTTGGCGATTCGACGACAAAGCCACAATGGAGTTCGTGCGTTCGTGGCCTCGTGTCCAGATTCGACGGCGAGTTCGTGAGTTGGTAACGGTTCGGCGCTTTAGATCTGTGTGCGTGCTCACTGTTCATCAGGTTGAGCAATTATTCTTATTATTCCTCTCTGAAATTCTTGACATTTTATGTTTTCTTCCTCATCCCAACATTACAAATCAACCCCGTGGTCCTGCTGCTCCTACAGGATTCGCTTACCCTCCAGCTCCCTCGCCTATGTTACCATTTTTCCGGCGTATAATTCGAACCCTCCTATTTTTCCTCAAATCCTGTAACACCCCTCCCTTTCCATCTCTGACCCCTCCCCTCAACATTAAGCTCTCTGATTCGAACTACTTACTGTGGAAGAATCAACTGCTAAATCACATTATAGCCTTTGATTTGGAATCGTTCATTGATGGCACACCTGCTCCACCGCAAGAAAATCCCCAATTTACTCTTTGGCAAAAATATAATAGAATTCTTATGAGTTGGATGTACTCTTCCTTGAATGAGGACAAACTCGGTGAAATTATTGGGTGTTCTTCTGCTTTCGATATTTGGGATCATCTCCGTACTGTCTATGAATCAGCTTCCACCGCAAGAATTATGGGTATTTGGTCTCAACTTTAG ATGCAAGCTGAAGTCTGCAAGTTGAAGTTGGTCGCGAAGAGGAAGAAAACTGAGAAGATCTTGTTGAATCACACCGTGGTTGACGGGGAAAATCACGTCGTGGCTTTGAATCATATTTGGAACGAAGGGGATTTCCCCTTCGTTTCAGACCGGAATCGAAGGGGAAACGGTGGCCACGACGTTTTAGATCTGGTCGATGACGATTCACGATTCAGTGAATTCGTGAAGTTCGTGCATTCGTCTTGTGGTCGGCGATTCACGATTTGGCGATTCGACGACAAAGCCACAATGGAGTTCGTGCGTTCGTGGCCTCGTGTCCAGATTCGACGGCGAGTTCGTGAGTTGGTAACGGTTCGGCGCTTTAGATCTGTGTGCGTGCTCACTGTTCATCAGGTTGAGCAATTATTCTTATTATTCCTCTCTGAAATTCTTGACATTTTATGTTTTCTTCCTCATCCCAACATTACAAATCAACCCCGTGGTCCTGCTGCTCCTACAGGATTCGCTTACCCTCCAGCTCCCTCGCCTATGTTACCATTTTTCCGGCGTATAATTCGAACCCTCCTATTTTTCCTCAAATCCTGTAACACCCCTCCCTTTCCATCTCTGACCCCTCCCCTCAACATTAAGCTCTCTGATTCGAACTACTTACTGTGGAAGAATCAACTGCTAAATCACATTATAGCCTTTGATTTGGAATCGTTCATTGATGGCACACCTGCTCCACCGCAAGAAAATCCCCAATTTACTCTTTGGCAAAAATATAATAGAATTCTTATGAGTTGGATGTACTCTTCCTTGAATGAGGACAAACTCGGTGAAATTATTGGGTGTTCTTCTGCTTTCGATATTTGGGATCATCTCCGTACTGTCTATGAATCAGCTTCCACCGCAAGAATTATGGGTATTTGGTCTCAACTTTAG MQAEVCKLKLVAKRKKTEKILLNHTVVDGENHVVALNHIWNEGDFPFVSDRNRRGNGGHDVLDLVDDDSRFSEFVKFVHSSCGRRFTIWRFDDKATMEFVRSWPRVQIRRRVRELVTVRRFRSVCVLTVHQVEQLFLLFLSEILDILCFLPHPNITNQPRGPAAPTGFAYPPAPSPMLPFFRRIIRTLLFFLKSCNTPPFPSLTPPLNIKLSDSNYLLWKNQLLNHIIAFDLESFIDGTPAPPQENPQFTLWQKYNRILMSWMYSSLNEDKLGEIIGCSSAFDIWDHLRTVYESASTARIMGIWSQL Homology
BLAST of Lag0008791 vs. NCBI nr
Match: XP_022155181.1 (uncharacterized protein LOC111022315 [Momordica charantia]) HSP 1 Score: 136.0 bits (341), Expect = 5.6e-28 Identity = 60/118 (50.85%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of Lag0008791 vs. NCBI nr
Match: GFY85402.1 (hypothetical protein Acr_04g0001400 [Actinidia rufa]) HSP 1 Score: 119.8 bits (299), Expect = 4.2e-23 Identity = 63/154 (40.91%), Postives = 87/154 (56.49%), Query Frame = 0
BLAST of Lag0008791 vs. NCBI nr
Match: GFZ12741.1 (UBX domain-containing protein [Actinidia rufa]) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-22 Identity = 63/161 (39.13%), Postives = 88/161 (54.66%), Query Frame = 0
BLAST of Lag0008791 vs. NCBI nr
Match: PON47862.1 (hypothetical protein TorRG33x02_321990 [Trema orientale]) HSP 1 Score: 117.1 bits (292), Expect = 2.7e-22 Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of Lag0008791 vs. NCBI nr
Match: CAN83798.1 (hypothetical protein VITISV_039072 [Vitis vinifera]) HSP 1 Score: 104.0 bits (258), Expect = 2.4e-18 Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 0
BLAST of Lag0008791 vs. ExPASy TrEMBL
Match: A0A6J1DQX7 (uncharacterized protein LOC111022315 OS=Momordica charantia OX=3673 GN=LOC111022315 PE=4 SV=1) HSP 1 Score: 136.0 bits (341), Expect = 2.7e-28 Identity = 60/118 (50.85%), Postives = 84/118 (71.19%), Query Frame = 0
BLAST of Lag0008791 vs. ExPASy TrEMBL
Match: A0A7J0EGI5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_04g0001400 PE=4 SV=1) HSP 1 Score: 119.8 bits (299), Expect = 2.0e-23 Identity = 63/154 (40.91%), Postives = 87/154 (56.49%), Query Frame = 0
BLAST of Lag0008791 vs. ExPASy TrEMBL
Match: A0A7J0GPN0 (UBX domain-containing protein OS=Actinidia rufa OX=165716 GN=Acr_23g0011260 PE=4 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 5.9e-23 Identity = 63/161 (39.13%), Postives = 88/161 (54.66%), Query Frame = 0
BLAST of Lag0008791 vs. ExPASy TrEMBL
Match: A0A2P5BGF8 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_321990 PE=4 SV=1) HSP 1 Score: 117.1 bits (292), Expect = 1.3e-22 Identity = 55/119 (46.22%), Postives = 80/119 (67.23%), Query Frame = 0
BLAST of Lag0008791 vs. ExPASy TrEMBL
Match: A5C0U6 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Vitis vinifera OX=29760 GN=VITISV_039072 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.1e-18 Identity = 56/120 (46.67%), Postives = 73/120 (60.83%), Query Frame = 0
BLAST of Lag0008791 vs. TAIR 10
Match: AT1G34070.1 (CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G48050.1); Has 648 Blast hits to 647 proteins in 29 species: Archae - 0; Bacteria - 0; Metazoa - 16; Fungi - 25; Plants - 607; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 8.1e-09 Identity = 30/103 (29.13%), Postives = 53/103 (51.46%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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