Lag0008760 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0008760
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	SWIM-type domain-containing protein
Location	chr9: 29292553 .. 29297629 (+)
RNA-Seq Expression	Lag0008760
Synteny	Lag0008760

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCATTGTCTCGTGAGGAGTTAGTGATACTTGAACTTGGAAATGGTGGGGATAATGATATAGAGACAGAAGTTGATGAATTATTTGGAGAGAATGTTAATATTAATCCTCCCCCTGAAAAGCAAAATGAGAAGCCACCTTCAGATATTTTCACACATATAAATTGGGAGATTACTAATTCAATATGTGAAGTAGAGTTCACATTGGAAGAATGGACAAGATGCGTAGAAATGAACCCAAATGTAATAATCAAAGGATTATTATTTGAGAGTAAAAAAGATCTATAGCTTGCCGTTAAAAAATATTGTGTTGTAAACCATTATCAAATTATTGTGGTAAAATCAAATCAGGATATTTGGTATGTGAAGTGCAAACAATGGGATGGGGGGTGCAACTGGACGCTTCGTGCCTGTCGGCGTAAAACTCATGGAATGTTTGAAATTACGAAGCTTGAAGGGGAACATTCGTGTTTATACCCAGAACTCACACAAGACCATTCACAACTGGACTCGGATTTTATGTGTAATGAAATCCAAAATCTTGTTCGAAGTGATCTTGGAGCTTCCATAACATTATTGTAAGAAACTATAAAATAAGAATATGGTTATAGTGTGAACCTAGAGCATACCATGAATGGATGACTACAAATGGTTGGAGTGAATCTAGAGCATACCATCGATATTGTCTTCGTCATGTGACCAGTGACTTTAATAAAAAGTATAAATCAAAGCAACTCAAAGGCTTGGTCTATAGGGCAGGACGTCAGCACCAAAGGCGCAAGTTCAACCGGTGTATGAAAGAGTTGAAGCGATTAAATCCTGATTGTCTTGAATTTTTCACTCACTTGAACCTAGAAAAGTGGACACAATCACATGACAATGGGTACCGCTATGGATGGATGACTACAAATCTAGCTGAATGTATTAATGGTGTGTTTAAAGGAGCTAGAATGTTGCCCATCACGACATTGGTCAAGTGCACTTGGTATCAGACAAATCCATTATTTTTAACAGCATCGAGAAGAAATCAGTGAAGCATTAGATCGTGGTGAACCGTATAAATGATATGATTTAAATAGACTTAGGAGGTGGGAAAAGAGAGTTGTTGAACATACTGTAAAGTCTGTTGATAGAAGTACTTCAAGTTTTGAAATTGAAACAAGAATAAGTATGATTTCTCCATACAAAGGTCAACAAACCCAAGTGGTTTGCTTAAAAGATAAGTCATGTACTTGTAATAAGTGGTAGACCTAGAAGATCCCCTGTTCCTATGTAATTGCAGCTTGTAACCACATTCATTTGGCACACTTACCTTTTGTTCATGAAACATACAAACTATCACAATACTAGCAAAACTACGAAAGTCAATTCCATCCTATACAACATAGAGATTATTGGCCAGAGGTACAATTCGAAATACTTCGTCCAAACAAGCATTTGTTGAGAGAACATGGACGACCAAAAACTACACGAATTCATAATGAGATAGATTGGCGAGAAGCTGGTACAAAAGTCTGTTATGGTTTGTATAAGCGAGAAGGACATAAAAAGCGCACTTGCCCAACTCGTACTTTAGGCGCTTCATCTTCAACCCATGGATGAATAAGGTTTATTTTGATTCACATTTCATTTCTAAACATTATTATTAGTTGATTAATATTGATTTTGATTTCTTTAAATTTTTCATCTACATGTATGGAGCTCGTGTAGTGTGTTGGGTTTTATGCCCTAAAACTCGTAGATAGTAGATGAAACAAATTAATCGATCTCAATAAAGCGTTATTTGAGTGTTTTAGTAATTTGGTTATTGAATAATCGAGTTTGCACTAACAAACCCTAAATCCAATAAACTAAGATCCAAGGTTATTTAAATAAAACTTGGACTAGTATGTGGGGACATACGAGGATCGGTGTTTAGGTAACAACCTAAATGGTCTATAGTATAGGGATAAGGTTAGGTACCTTATCCTGGTGACACTATGAGATACGACCTACTTCGTATATTATACAGATGCATTGATCCAAATGGTATATAGTATAGGGATAAGGTTGAGTACTTTATCCTGGTGACACTATAAGATAACTCAGGGGTAAAACGGTAATTTGACCCAGCTGGAGTTACGAACACTCGTGAAGGATTGACTTACTATATTGGTTGATATCCGTGGACACAGAAATATTCTACAGTGAGAAGAGTGCAGTTGTGGGTCTTTAGTGGAGTGACTCACAGTTAATGAATGTTGATTAACTTGGTTAATGAGTTTAGCCAGTTAATCTCGTATCGTTGGAGCTTCTGATCTGTAGGTCCATTAGGTCCACCTGCTAGCTCGTAACGGGTACTGAGATTATTTGATACAATTAATAATATAATGTATGGAGATACGTTATAGTATAAGTTTAATTAGTGAATTAAACTTTATAATAAAATTAATTTTGGATGTGATTCAAAATTAATTAATGAGAGAATTATATATATTTGAAGGAGTTCAAAAATTAAATATGAATTAGATTCATATTAAACTATAGATTAAAAATAATATGAATGTGATTCATATTTAACTATAGTATAAAAGAGAAAAATGAAATTAATTAGATATGTGATATTTAATTAATTAATTAATTAATTAATTGGTGAATAATTAATTTAACTTAATTTGGTTAAATATGATTTAATCAAAATTAAAACTATAGTTTATAATTAATGTTCATTTGATGCACATTAGAACTATAGGTTTATGTGAGAGATATTTGTTTGAATATGATTCAAATAAATACATTAATTAAATGTGATTTAATTAATGGTTTAATTATTTAATATGTGATTAATTAATTAAAAGTAAAATTAATTTTATTGTTATAAAATTTGTTTTAAAACTCCCAGCAACGGCTGGGAGTTGGATCGTGGTTTCGTGATTCACTTTTCTCTCTCACCAGAAAAAGAAATACAAGGAAAAAGGCTATGCTTTGAGTTTTTTCTCAACTCTCTATCTATTCTCTCTTAAGAAAAACCAATAAAAGGTTGTTGAATTTTTTCTTCCCTTCAAGATATATTTTGGGGTTCCCACAAGCCGGTGATCTCAAAAACCCAAGAGTCATAGTGGGTGTTTTACTTGTGGTGGTGTCCTTCAAAGAAGAGATTACAGTAGATGAATTATACGCGTTTTGGAGCATCGTGCTGAGGAGTTTGGCCACGTCAAACACGTAAGTTTTCTTAAATTCTAAATAGTTTAGAATATTGAAAAACATGCTTAATCTGTAAGATTAAATCTGTAGAAATTGTTTCTAAAATGTTGGCCCAATGTACTAGTATTCTGTGATATTGAAGTTGGTTTACAAACTTTGTAATGGATTCTGTTATAGATTTTGTAATGGTCTTTATAATGGATTTTGTAATGTCAATGGAGTTATATGCTTTGTGGAGAGTGTACTATTACACTCTCAAGATGTTGCAGTGCAATTCGAACTACTATAAATGGAGAACCTGTAACTGGCTCATTACAGTATAATTAGGGTCAGGTATGTGAGGATTTTTTGGGAGTTCGACCCCCTAAATTGCATGGATCTAGATTAAGCATTCCATGGTTGACAGCACAGTTTTCAGAGTTGCCTCCCAATGTCGATGACATCACAATACAGAGGCATGCGAGAGCCTATATTATGTAATTGATTGGAGGGTTTCTATTTAATTTGCTGACAAGTCCAACACACTTGTTCATCTCATGTTTCTTCCTCTGTTAGGAAACTTCGAGACAGCTAGACAATATTCATGGGGCAGCGCATGCGTTGCATGGTTGTACAGAGAATTATGTCGAGCTAGTAGTGTCAGTGCATTAGAGATAGCCGGTCCACTAATACTACTACAAGTTTGGGCGTTTGATCGGTTTTCTATTGTTGCACCACTACATGACTTACTGACCCCTAATCATTATGTTGGACGACCACTTAGTGTTCGGTATGTTAAATTTACGTATAATCTAAATTTAACAAAAATTTGTACAATAATATGTTTTGATTATATTATATAATGTGCAAATAGAACGAAATTTTGGTTGTATTTGAGCAAAATACAAATATGTTGATTACGTATCGTATTACATTTGATCGGCTTATGCCCAACTAGGTAAAAAAGTAATCAATTTTTTCTCAAATTTAAAAAATTATATATTAACTTTAATTTCATTTATTAAATTTATTGTTTTATAAATTTCAAATCACATGGACACCATATACACCTGATATTATGACCTTACTATTGGACTACTGCCATAATGGATAGGAGATTTGGTCGACTGTAAGCTCTCTCATATGTTTTCATATTGTAGAGTGACATTACCCAAATCGAGTGCTAAGACAATTTGGAATCCGACAAATGATGCCGCCATATTATGATACAGACATGGAGTTATATCAGTTAGACTTGTGAGGTAAACACGATCACGATTGGCGACAACATCATGCAACATTTATATCATTGTGGCGTGCACGTCGTGATCATTGTGTCTTGGGCGACATAGTAGACATGCCAGTTGTGTCCGATGACTACTTACACTGGTATGATTCAATCACAACGAGGTATATCATGCGTGAGGGTGCTTATTATGCTTGCATGGTAAATAGTATATACTTCGATTTGTTATTATTGAATTTCAGTTATAAATATTTTTATTATATTATTTTAATTATTTTCTTCTTATAGAATAAGTTTGTTCGAGATGTGCAACATTTTTCTGTGGAACAAAATATACCATAGTTAGGTTCTATGTGTGAGCAATATGTCACGAACGTAACTGACATCATTCAACAAACTAGAAGGCAAATTGTTGTTGACACTGATTGGACACGTGCTCGTCGTAGAAATTATCGACAACAGGTTACAGACATTCCACAGCAAAACGAAGATGAAGAACCTCTTATAGTTGATGATAACACTTCAACTCTTCCTGTACAGTCACTAGCGGATCAGAGAGACATTGTTTCAAGTTTTGGTCTGAAGGTTATAAAAGTCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAACATTAAAATACCGTTACGATAA

mRNA sequence

ATGTCATTGTCTCGTGAGGAGTTAGTGATACTTGAACTTGGAAATGGTGGGGATAATGATATAGAGACAGAAGTTGATGAATTATTTGGAGAGAATGTTAATATTAATCCTCCCCCTGAAAAGCAAAATGAGAAGCCACCTTCAGATATTTTCACACATATAAATTGGGAGATTACTAATTCAATATGTGAAGTAGAGTTCACATTGGAAGAATGGACAAGATGCGTAGAAATGAACCCAAATGATATTTGGTATGTGAAGTGCAAACAATGGGATGGGGGGTGCAACTGGACGCTTCGTGCCTGTCGGCGTAAAACTCATGGAATGTTTGAAATTACGAAGCTTGAAGGGGAACATTCGTGTTTATACCCAGAACTCACACAAGACCATTCACAACTGGACTCGGATTTTATGTGTAATGAAATCCAAAATCTTGTTCGAAGTGATCTTGGAGCTTCCATAACATTATTTGACTTTAATAAAAAGTATAAATCAAAGCAACTCAAAGGCTTGGTCTATAGGGCAGGACGTCAGCACCAAAGGCGCAAGTTCAACCGGTGTATGAAAGAGTTGAAGCGATTAAATCCTGATTGTCTTGAATTTTTCACTCACTTGAACCTAGAAAAGTGGACACAATCACATGACAATGGGTACCGCTATGGATGGATGACTACAAATCTAGCTGAATGTATTAATGGAAACTTCGAGACAGCTAGACAATATTCATGGGGCAGCGCATGCGTTGCATGGTTGTACAGAGAATTATGTCGAGCTAGTAGTGTCAGTGCATTAGAGATAGCCGGTCCACTAATACTACTACAAGTTTGGGCGTTTGATCGGTTTTCTATTGTTGCACCACTACATGACTTACTGACCCCTAATCATTATGTTGGACGACCACTTAGTGTTCGGCAAATTGTTGTTGACACTGATTGGACACGTGCTCGTCGTAGAAATTATCGACAACAGGTTACAGACATTCCACAGCAAAACGAAGATGAAGAACCTCTTATAGTTGATGATAACACTTCAACTCTTCCTGTACAGTCACTAGCGGATCAGAGAGACATTGTTTCAAGTTTTGGTCTGAAGGTTATAAAAGTCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAACATTAAAATACCGTTACGATAA

Coding sequence (CDS)

ATGTCATTGTCTCGTGAGGAGTTAGTGATACTTGAACTTGGAAATGGTGGGGATAATGATATAGAGACAGAAGTTGATGAATTATTTGGAGAGAATGTTAATATTAATCCTCCCCCTGAAAAGCAAAATGAGAAGCCACCTTCAGATATTTTCACACATATAAATTGGGAGATTACTAATTCAATATGTGAAGTAGAGTTCACATTGGAAGAATGGACAAGATGCGTAGAAATGAACCCAAATGATATTTGGTATGTGAAGTGCAAACAATGGGATGGGGGGTGCAACTGGACGCTTCGTGCCTGTCGGCGTAAAACTCATGGAATGTTTGAAATTACGAAGCTTGAAGGGGAACATTCGTGTTTATACCCAGAACTCACACAAGACCATTCACAACTGGACTCGGATTTTATGTGTAATGAAATCCAAAATCTTGTTCGAAGTGATCTTGGAGCTTCCATAACATTATTTGACTTTAATAAAAAGTATAAATCAAAGCAACTCAAAGGCTTGGTCTATAGGGCAGGACGTCAGCACCAAAGGCGCAAGTTCAACCGGTGTATGAAAGAGTTGAAGCGATTAAATCCTGATTGTCTTGAATTTTTCACTCACTTGAACCTAGAAAAGTGGACACAATCACATGACAATGGGTACCGCTATGGATGGATGACTACAAATCTAGCTGAATGTATTAATGGAAACTTCGAGACAGCTAGACAATATTCATGGGGCAGCGCATGCGTTGCATGGTTGTACAGAGAATTATGTCGAGCTAGTAGTGTCAGTGCATTAGAGATAGCCGGTCCACTAATACTACTACAAGTTTGGGCGTTTGATCGGTTTTCTATTGTTGCACCACTACATGACTTACTGACCCCTAATCATTATGTTGGACGACCACTTAGTGTTCGGCAAATTGTTGTTGACACTGATTGGACACGTGCTCGTCGTAGAAATTATCGACAACAGGTTACAGACATTCCACAGCAAAACGAAGATGAAGAACCTCTTATAGTTGATGATAACACTTCAACTCTTCCTGTACAGTCACTAGCGGATCAGAGAGACATTGTTTCAAGTTTTGGTCTGAAGGTTATAAAAGTCCCCACGCAGCGGAAGCGCATCGATTGGACCTTACGCCGTATATTAATTAACATTAAAATACCGTTACGATAA

Protein sequence

MSLSREELVILELGNGGDNDIETEVDELFGENVNINPPPEKQNEKPPSDIFTHINWEITNSICEVEFTLEEWTRCVEMNPNDIWYVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHSCLYPELTQDHSQLDSDFMCNEIQNLVRSDLGASITLFDFNKKYKSKQLKGLVYRAGRQHQRRKFNRCMKELKRLNPDCLEFFTHLNLEKWTQSHDNGYRYGWMTTNLAECINGNFETARQYSWGSACVAWLYRELCRASSVSALEIAGPLILLQVWAFDRFSIVAPLHDLLTPNHYVGRPLSVRQIVVDTDWTRARRRNYRQQVTDIPQQNEDEEPLIVDDNTSTLPVQSLADQRDIVSSFGLKVIKVPTQRKRIDWTLRRILINIKIPLR

Homology

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BLAST of Lag0008760 vs. NCBI nr
Match: TYK02543.1 (uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa])

HSP 1 Score: 231.9 bits (590), Expect = 9.6e-57
Identity = 162/479 (33.82%), Postives = 199/479 (41.54%), Query Frame = 0


Query: 1   MSLSREELVILELGNGGDNDIETEVDELFGENVNINPPPEKQNEKPPSDIFTHINWEITN 60
           MSL  E+LVILE GN GD+DI+ E+DELFG   N+    E++NE+ PS+IFT I+W+ITN
Sbjct: 1   MSLRPEDLVILEPGNHGDSDIDVEIDELFGNEENM----EEENERIPSEIFTQIDWDITN 60

Query: 61  SICEVEFTL---EEW--TRC-------------------------------VEMNPNDIW 120
           S+CE   TL   +E+  T C                               VE N N IW
Sbjct: 61  SVCEQGSTLGNRDEFVDTSCLIQKGMLFDCKEDLQLAVKKYCVTQHYEIVVVESNQN-IW 120

Query: 121 YVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHSCLYPELTQDHSQLDSDFMCNEIQN 180
            V+CKQW  GCNW LR  RRK+HG+FEI++LEGEHSCLY  LTQDHSQLDS+FM  EIQN
Sbjct: 121 SVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGEHSCLYSNLTQDHSQLDSNFMSIEIQN 180

Query: 181 LVRSDLGASI-------------------------------------------------- 240
           +VR+D   ++                                                  
Sbjct: 181 IVRADPSVTVSVLMEMIKQQYGYTVKYRRVWQAKRKALVAVFGDWDKSYNELPYWLSAVV 240

Query: 241 --------------------TLF------------------------------------- 256
                               T+F                                     
Sbjct: 241 HYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGKML 300

[Close]

BLAST of Lag0008760 vs. NCBI nr
Match: KAA0044308.1 (uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa])

HSP 1 Score: 230.7 bits (587), Expect = 2.1e-56
Identity = 161/479 (33.61%), Postives = 199/479 (41.54%), Query Frame = 0


Query: 1   MSLSREELVILELGNGGDNDIETEVDELFGENVNINPPPEKQNEKPPSDIFTHINWEITN 60
           MSL  E+LVILE GN GD+DI+ E+DELFG   N+    E++NE+ PS+IFT I+W+ITN
Sbjct: 1   MSLRPEDLVILEPGNHGDSDIDVEIDELFGNEENM----EEENERIPSEIFTQIDWDITN 60

Query: 61  SICEVEFTL---EEW--TRC-------------------------------VEMNPNDIW 120
           S+CE   TL   +E+  T C                               VE N N IW
Sbjct: 61  SVCEQGSTLGNRDEFVDTSCLIQKGMLFDCKEDLQLAVKKYCVTQHYEIVVVESNQN-IW 120

Query: 121 YVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHSCLYPELTQDHSQLDSDFMCNEIQN 180
            V+CKQW  GCNW LR  RRK+HG+FEI++LEGEHSCLY  LTQDHSQLDS+FM  +IQN
Sbjct: 121 SVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGEHSCLYSNLTQDHSQLDSNFMSIQIQN 180

Query: 181 LVRSDLGASI-------------------------------------------------- 240
           +VR+D   ++                                                  
Sbjct: 181 IVRADPSVTVSVLMEMIKQQYGYTVKYRRVWQAKRKALVAVFGDWDKSYNELPYWLSAVV 240

Query: 241 --------------------TLF------------------------------------- 256
                               T+F                                     
Sbjct: 241 HYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGKML 300

[Close]

BLAST of Lag0008760 vs. NCBI nr
Match: XP_022153141.1 (uncharacterized protein LOC111020709 [Momordica charantia])

HSP 1 Score: 213.8 bits (543), Expect = 2.7e-51
Identity = 152/470 (32.34%), Postives = 185/470 (39.36%), Query Frame = 0


Query: 1   MSLSREELVILELGNGGDNDIETEVDELFGE----NVNINPPPEKQNEKPPSDIFTHINW 60
           MSL  +E+VILELGNG  +DIE EVDELF      N+ +N  P   NE+ PS +F  I++
Sbjct: 1   MSLDCDEIVILELGNGSASDIEVEVDELFRTELCLNIPVNLNPPLPNEEAPSPMFIEIDF 60

Query: 61  EITNSICEVEFTLEEWTRCVEMNPN----------------------------------- 120
           EI +SICE    LEE +  ++MN +                                   
Sbjct: 61  EIVDSICEEGSKLEEGSMSLKMNVDNIRIGSKFRTKEKLQLAVKKYCIVQHYQFVVMESN 120

Query: 121 -DIWYVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHSCLYPELTQDHSQLDSDFMCN 180
            D+WYVKCKQW+  C W LRA R K+HGMFEI+ LE  HS LY ELTQDHSQLDS+FM N
Sbjct: 121 QDMWYVKCKQWNDCCKWRLRARRHKSHGMFEISVLEEVHSYLYAELTQDHSQLDSNFMWN 180

Query: 181 EIQNLVRSDLGASIT--------------------------------------------- 240
           EIQN+VR D    +T                                             
Sbjct: 181 EIQNIVRXDPSTYVTSLQEVIKKDFGYCVNYKRMWQAKRKTLIKVFGDWEKSYEELSYWL 240

Query: 241 ------------------------------------------------------LFD--- 243
                                                                 L+D   
Sbjct: 241 NALVHYNADTRVLWDLIPSNKPRHLIFGRVFWSFGPAIEGFKHCRPLIQIDGTHLYDKYK 300

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BLAST of Lag0008760 vs. NCBI nr
Match: KAA0054037.1 (uncharacterized protein E6C27_scaffold318G001000 [Cucumis melo var. makuwa])

HSP 1 Score: 207.2 bits (526), Expect = 2.5e-49
Identity = 142/411 (34.55%), Postives = 181/411 (44.04%), Query Frame = 0


Query: 1   MSLSREELVILELGNGGDNDIETEVDELFGENVNINPPPEKQNEKPPSDIFTHINWEITN 60
           MSL  E+L+ILE  N GD+DI+ EVDELFG   N+    E++NE+ PS+IFT I+W+ITN
Sbjct: 1   MSLRPEDLIILEPANHGDSDIDVEVDELFGNEENM----EEENERIPSEIFTQIDWDITN 60

Query: 61  SICEVEFTLEEW-----TRC-------------------------------VEMNPNDIW 120
           S+CE   TL        T C                               VE N N IW
Sbjct: 61  SVCEQGSTLANRDESVDTSCLIQKGMLFDCKEDLQLAVKKYCVTQHYEIVVVESNQN-IW 120

Query: 121 YVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEH----------SCLYPELTQDHS--- 180
            V+CKQW  GCNW LR  RRK+HG+FEI++LEGEH          S L   + Q +    
Sbjct: 121 SVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGEHSFKADPSVTVSVLMEMIKQQYGTRV 180

Query: 181 ------------------------------------QLDSDFMCNEIQN----------- 240
                                               Q+D   +  + +            
Sbjct: 181 DWFFLPSDVFGTTIFGRVFWAFGPAIEGLKYCRPLIQIDGTHLYGKYKGKMLTVLSIDAN 240

Query: 241 ---------LVRSDLGASITLF-------------------------------------- 256
                    +V  +  +S + F                                      
Sbjct: 241 GHIFPLAFAIVEGENASSWSWFLYALRQYVTDQDGICLISDRHRGILSAINNEEIGWSEP 300

[Close]

BLAST of Lag0008760 vs. NCBI nr
Match: XP_031737534.1 (uncharacterized protein LOC116402427 [Cucumis sativus])

HSP 1 Score: 193.4 bits (490), Expect = 3.8e-45
Identity = 140/443 (31.60%), Postives = 178/443 (40.18%), Query Frame = 0


Query: 1   MSLSREELVILELGNGGDNDIETEVDELFGENVNINPPPEKQNEKPPSDIFTHINWEITN 60
           MSL  E+LVILE GN GD+DI+ EVDELF  NV+++     Q       +      ++  
Sbjct: 1   MSLRPEDLVILEPGNDGDSDIDVEVDELFDRNVSVDTSCLIQ-----KGMIFDSKEDLML 60

Query: 61  SICEVEFTLEEWTRCVEMNPNDIWYVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHS 120
           ++     T       VE N + +W ++CKQW  GCNW LR  +RK+HG+FEITKL+GEHS
Sbjct: 61  AVKRYCVTQHYEIVVVESNQH-LWNIRCKQWTNGCNWRLRGTKRKSHGLFEITKLQGEHS 120

Query: 121 CLYPELTQDHSQLDSDFMCNEIQNLVRSD-----------------------------LG 180
           CLY  LTQDHSQLDS+FM  +IQN+V++D                               
Sbjct: 121 CLYSNLTQDHSQLDSNFMSVQIQNMVKADPTITVSVLMEIIKQQYGYGVKYGQVWQAKKK 180

Query: 181 ASITLF------------------------------------------------------ 240
           A IT+F                                                      
Sbjct: 181 ALITVFGDWEKSYNELPYWLSAVVHYNPGTRVDWFFLPSDVPGTTIFGRVFWSFGPAIEG 240

Query: 241 ------------------------------------------------------------ 256
                                                                       
Sbjct: 241 FKHCRPLIQIDGTHLYGKYKGKMLTALSIDANGHIFPLAFAIVEGENTSSWSWFLRALRE 300

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BLAST of Lag0008760 vs. ExPASy Swiss-Prot
Match: Q9LNG5 (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1)

HSP 1 Score: 60.5 bits (145), Expect = 5.0e-08
Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 234 NFETARQYSWGSACVAWLYRELCRASSVSALEIAGPLILLQVWAFDRFSIVAP 287
           +F+   + SWGSA +A LYRELCRAS  +   I GPL+LLQ+WA++R  +  P
Sbjct: 212 DFDEVAKLSWGSATLALLYRELCRASKRTVSTICGPLVLLQLWAWERLHVGRP 264

[Close]

BLAST of Lag0008760 vs. ExPASy Swiss-Prot
Match: Q9LMT7 (Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV=1)

HSP 1 Score: 47.8 bits (112), Expect = 3.4e-04
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 234 NFETARQYSWGSACVAWLYRELCRASSVSALEIAGPLILLQVWAFDRFSIVAP 287
           +FE A +Y+WG+A +A+LYR++  AS  S   I G L LLQ W++   +I  P
Sbjct: 195 DFEKAGEYAWGAAALAFLYRQIGNASQRSQSIIGGCLTLLQCWSYFHLNIDRP 247

[Close]

BLAST of Lag0008760 vs. ExPASy TrEMBL
Match: A0A5D3BS92 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold201G00230 PE=4 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 4.6e-57
Identity = 162/479 (33.82%), Postives = 199/479 (41.54%), Query Frame = 0


Query: 1   MSLSREELVILELGNGGDNDIETEVDELFGENVNINPPPEKQNEKPPSDIFTHINWEITN 60
           MSL  E+LVILE GN GD+DI+ E+DELFG   N+    E++NE+ PS+IFT I+W+ITN
Sbjct: 1   MSLRPEDLVILEPGNHGDSDIDVEIDELFGNEENM----EEENERIPSEIFTQIDWDITN 60

Query: 61  SICEVEFTL---EEW--TRC-------------------------------VEMNPNDIW 120
           S+CE   TL   +E+  T C                               VE N N IW
Sbjct: 61  SVCEQGSTLGNRDEFVDTSCLIQKGMLFDCKEDLQLAVKKYCVTQHYEIVVVESNQN-IW 120

Query: 121 YVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHSCLYPELTQDHSQLDSDFMCNEIQN 180
            V+CKQW  GCNW LR  RRK+HG+FEI++LEGEHSCLY  LTQDHSQLDS+FM  EIQN
Sbjct: 121 SVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGEHSCLYSNLTQDHSQLDSNFMSIEIQN 180

Query: 181 LVRSDLGASI-------------------------------------------------- 240
           +VR+D   ++                                                  
Sbjct: 181 IVRADPSVTVSVLMEMIKQQYGYTVKYRRVWQAKRKALVAVFGDWDKSYNELPYWLSAVV 240

Query: 241 --------------------TLF------------------------------------- 256
                               T+F                                     
Sbjct: 241 HYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGKML 300

[Close]

BLAST of Lag0008760 vs. ExPASy TrEMBL
Match: A0A5A7TN56 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold46G00290 PE=4 SV=1)

HSP 1 Score: 230.7 bits (587), Expect = 1.0e-56
Identity = 161/479 (33.61%), Postives = 199/479 (41.54%), Query Frame = 0


Query: 1   MSLSREELVILELGNGGDNDIETEVDELFGENVNINPPPEKQNEKPPSDIFTHINWEITN 60
           MSL  E+LVILE GN GD+DI+ E+DELFG   N+    E++NE+ PS+IFT I+W+ITN
Sbjct: 1   MSLRPEDLVILEPGNHGDSDIDVEIDELFGNEENM----EEENERIPSEIFTQIDWDITN 60

Query: 61  SICEVEFTL---EEW--TRC-------------------------------VEMNPNDIW 120
           S+CE   TL   +E+  T C                               VE N N IW
Sbjct: 61  SVCEQGSTLGNRDEFVDTSCLIQKGMLFDCKEDLQLAVKKYCVTQHYEIVVVESNQN-IW 120

Query: 121 YVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHSCLYPELTQDHSQLDSDFMCNEIQN 180
            V+CKQW  GCNW LR  RRK+HG+FEI++LEGEHSCLY  LTQDHSQLDS+FM  +IQN
Sbjct: 121 SVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGEHSCLYSNLTQDHSQLDSNFMSIQIQN 180

Query: 181 LVRSDLGASI-------------------------------------------------- 240
           +VR+D   ++                                                  
Sbjct: 181 IVRADPSVTVSVLMEMIKQQYGYTVKYRRVWQAKRKALVAVFGDWDKSYNELPYWLSAVV 240

Query: 241 --------------------TLF------------------------------------- 256
                               T+F                                     
Sbjct: 241 HYNPGTRVDWFFLPSDVPGTTIFGRVFWAFGPAIEGFKYCRPLIQIDGTHLYGKYKGKML 300

[Close]

BLAST of Lag0008760 vs. ExPASy TrEMBL
Match: A0A6J1DJS7 (uncharacterized protein LOC111020709 OS=Momordica charantia OX=3673 GN=LOC111020709 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 1.3e-51
Identity = 152/470 (32.34%), Postives = 185/470 (39.36%), Query Frame = 0


Query: 1   MSLSREELVILELGNGGDNDIETEVDELFGE----NVNINPPPEKQNEKPPSDIFTHINW 60
           MSL  +E+VILELGNG  +DIE EVDELF      N+ +N  P   NE+ PS +F  I++
Sbjct: 1   MSLDCDEIVILELGNGSASDIEVEVDELFRTELCLNIPVNLNPPLPNEEAPSPMFIEIDF 60

Query: 61  EITNSICEVEFTLEEWTRCVEMNPN----------------------------------- 120
           EI +SICE    LEE +  ++MN +                                   
Sbjct: 61  EIVDSICEEGSKLEEGSMSLKMNVDNIRIGSKFRTKEKLQLAVKKYCIVQHYQFVVMESN 120

Query: 121 -DIWYVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHSCLYPELTQDHSQLDSDFMCN 180
            D+WYVKCKQW+  C W LRA R K+HGMFEI+ LE  HS LY ELTQDHSQLDS+FM N
Sbjct: 121 QDMWYVKCKQWNDCCKWRLRARRHKSHGMFEISVLEEVHSYLYAELTQDHSQLDSNFMWN 180

Query: 181 EIQNLVRSDLGASIT--------------------------------------------- 240
           EIQN+VR D    +T                                             
Sbjct: 181 EIQNIVRXDPSTYVTSLQEVIKKDFGYCVNYKRMWQAKRKTLIKVFGDWEKSYEELSYWL 240

Query: 241 ------------------------------------------------------LFD--- 243
                                                                 L+D   
Sbjct: 241 NALVHYNADTRVLWDLIPSNKPRHLIFGRVFWSFGPAIEGFKHCRPLIQIDGTHLYDKYK 300

[Close]

BLAST of Lag0008760 vs. ExPASy TrEMBL
Match: A0A5A7UHL3 (SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold318G001000 PE=4 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 1.2e-49
Identity = 142/411 (34.55%), Postives = 181/411 (44.04%), Query Frame = 0


Query: 1   MSLSREELVILELGNGGDNDIETEVDELFGENVNINPPPEKQNEKPPSDIFTHINWEITN 60
           MSL  E+L+ILE  N GD+DI+ EVDELFG   N+    E++NE+ PS+IFT I+W+ITN
Sbjct: 1   MSLRPEDLIILEPANHGDSDIDVEVDELFGNEENM----EEENERIPSEIFTQIDWDITN 60

Query: 61  SICEVEFTLEEW-----TRC-------------------------------VEMNPNDIW 120
           S+CE   TL        T C                               VE N N IW
Sbjct: 61  SVCEQGSTLANRDESVDTSCLIQKGMLFDCKEDLQLAVKKYCVTQHYEIVVVESNQN-IW 120

Query: 121 YVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEH----------SCLYPELTQDHS--- 180
            V+CKQW  GCNW LR  RRK+HG+FEI++LEGEH          S L   + Q +    
Sbjct: 121 SVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGEHSFKADPSVTVSVLMEMIKQQYGTRV 180

Query: 181 ------------------------------------QLDSDFMCNEIQN----------- 240
                                               Q+D   +  + +            
Sbjct: 181 DWFFLPSDVFGTTIFGRVFWAFGPAIEGLKYCRPLIQIDGTHLYGKYKGKMLTVLSIDAN 240

Query: 241 ---------LVRSDLGASITLF-------------------------------------- 256
                    +V  +  +S + F                                      
Sbjct: 241 GHIFPLAFAIVEGENASSWSWFLYALRQYVTDQDGICLISDRHRGILSAINNEEIGWSEP 300

[Close]

BLAST of Lag0008760 vs. ExPASy TrEMBL
Match: A0A5A7SLM1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold19G001250 PE=4 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 2.2e-43
Identity = 140/441 (31.75%), Postives = 173/441 (39.23%), Query Frame = 0


Query: 1   MSLSREELVILELGNGGDNDIETEVDELFGENVNINPPPEKQNEKPPSDIFTHINWEITN 60
           M L  E+LVILE GN  D+DI+ E+DELFG   N+    E++NE+ PS+IFT I+W+ITN
Sbjct: 1   MLLRPEDLVILEPGNHEDSDIDVEIDELFGNEENM----EEENERIPSEIFTQIDWDITN 60

Query: 61  SICEVEFTL---EEW--TRC-------------------------------VEMNPNDIW 120
           S+CE   TL   +E+  T C                               VE N N IW
Sbjct: 61  SVCEQGSTLANRDEFVDTLCLIQKGMLFDCKEDLQLAVKKYCVTQHYKIVVVESNQN-IW 120

Query: 121 YVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHSCLYPELTQDHSQLDSDFMCNEIQN 180
            V+CKQW  GCNW LR  RRK+HG+FEI++LEGEHSCLY  LTQDHSQLDS+FM  EIQN
Sbjct: 121 SVRCKQWSNGCNWRLRGSRRKSHGLFEISRLEGEHSCLYSNLTQDHSQLDSNFMSIEIQN 180

Query: 181 LVRSDLGASI-------------------------------------------------- 218
           +VR+D   ++                                                  
Sbjct: 181 IVRADSSVTMSVLMEMIKQQYGYTVKYRRVWQAKRKALVAVFGDWDKSYNELLYWLSAVV 240

[Close]

BLAST of Lag0008760 vs. TAIR 10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases )

HSP 1 Score: 60.5 bits (145), Expect = 3.6e-09
Identity = 27/53 (50.94%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 234 NFETARQYSWGSACVAWLYRELCRASSVSALEIAGPLILLQVWAFDRFSIVAP 287
           +F+   + SWGSA +A LYRELCRAS  +   I GPL+LLQ+WA++R  +  P
Sbjct: 212 DFDEVAKLSWGSATLALLYRELCRASKRTVSTICGPLVLLQLWAWERLHVGRP 264

[Close]

BLAST of Lag0008760 vs. TAIR 10
Match: AT1G49920.1 (MuDR family transposase )

HSP 1 Score: 51.6 bits (122), Expect = 1.7e-06
Identity = 25/66 (37.88%), Postives = 41/66 (62.12%), Query Frame = 0


Query: 82  DIWYVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHSCLYPELTQDHSQLDSDFMCNE 141
           D++ V+C++W   C W++ A RR+  G+FEIT+  G H C YPE   D    D++ +  +
Sbjct: 215 DVYVVECERWH--CKWSICASRREEDGLFEITECSGPHDC-YPEHLND---FDAECIPFQ 274

Query: 142 IQNLVR 148
           I+ +VR
Sbjct: 275 IERVVR 274

HSP 2 Score: 43.9 bits (102), Expect = 3.5e-04
Identity = 23/67 (34.33%), Postives = 35/67 (52.24%), Query Frame = 0


Query: 157 FDFNKKYKSKQLKGLVYRAGRQHQRRKFNRCMKELKRLNPDCLEFFTHLNLEKWTQSHDN 216
           FD+N  +       LV  AG   Q+ +F+  MKE+K  NP+  ++       +W  +HD+
Sbjct: 488 FDYNMHF-------LVDEAGSSSQKEEFDSYMKEIKERNPEAWKWLDQFPPHQWALAHDD 547

Query: 217 GYRYGWM 224
           G RYG M
Sbjct: 548 GRRYGIM 547

[Close]

BLAST of Lag0008760 vs. TAIR 10
Match: AT1G64255.1 (MuDR family transposase )

HSP 1 Score: 48.9 bits (115), Expect = 1.1e-05
Identity = 32/100 (32.00%), Postives = 51/100 (51.00%), Query Frame = 0


Query: 68  TLEEWTRC-VEMNPNDIWYVKCKQWDGGCNWTLRACRRKTHGMFEITKLEGEHSCLYPEL 127
           +L+   +C V     D +  +C +W   C W+L A R K HG+ EI K  G H+C +P +
Sbjct: 212 SLKAQQKCVVRETAKDEYIFECIRWK--CKWSLGAARMKKHGLVEIIKYTGPHTC-HPIV 271

Query: 128 TQDHSQLDSDFMCNEIQNLVRSDLGASITLFDFNKKYKSK 167
            +D     S+F  +EI+  VR     + T+ +  K +K K
Sbjct: 272 PED---FKSEFETDEIERAVR--YMPTQTISELKKWWKKK 303

[Close]

BLAST of Lag0008760 vs. TAIR 10
Match: AT1G17930.1 (Aminotransferase-like, plant mobile domain family protein )

HSP 1 Score: 47.8 bits (112), Expect = 2.4e-05
Identity = 23/53 (43.40%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 234 NFETARQYSWGSACVAWLYRELCRASSVSALEIAGPLILLQVWAFDRFSIVAP 287
           +FE A +Y+WG+A +A+LYR++  AS  S   I G L LLQ W++   +I  P
Sbjct: 195 DFEKAGEYAWGAAALAFLYRQIGNASQRSQSIIGGCLTLLQCWSYFHLNIDRP 247

[Close]

BLAST of Lag0008760 vs. TAIR 10
Match: AT1G64260.1 (MuDR family transposase )

HSP 1 Score: 45.4 bits (106), Expect = 1.2e-04
Identity = 19/59 (32.20%), Postives = 35/59 (59.32%), Query Frame = 0


Query: 163 YKSKQLKGLVYRAGRQHQRRKFNRCMKELKRLNPDCLEFFTHLNLEKWTQSHDNGYRYG 222
           ++   L+ LV +AG  +Q+ +F+  M ++K  NP+  ++   +   KW  +HD+G RYG
Sbjct: 482 FRDYNLESLVEQAGSTNQKEEFDSYMNDIKEKNPEAWKWLDQIPRHKWALAHDSGLRYG 540

The following BLAST results are available for this feature:

BLAST of Lag0008760 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK02543.1	9.6e-57	33.82	uncharacterized protein E5676_scaffold201G00230 [Cucumis melo var. makuwa]	[more]
KAA0044308.1	2.1e-56	33.61	uncharacterized protein E6C27_scaffold46G00290 [Cucumis melo var. makuwa]	[more]
XP_022153141.1	2.7e-51	32.34	uncharacterized protein LOC111020709 [Momordica charantia]	[more]
KAA0054037.1	2.5e-49	34.55	uncharacterized protein E6C27_scaffold318G001000 [Cucumis melo var. makuwa]	[more]
XP_031737534.1	3.8e-45	31.60	uncharacterized protein LOC116402427 [Cucumis sativus]	[more]

BLAST of Lag0008760 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LNG5	5.0e-08	50.94	Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana...	[more]
Q9LMT7	3.4e-04	43.40	Protein MAINTENANCE OF MERISTEMS OS=Arabidopsis thaliana OX=3702 GN=MAIN PE=1 SV...	[more]

BLAST of Lag0008760 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BS92	4.6e-57	33.82	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A5A7TN56	1.0e-56	33.61	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A6J1DJS7	1.3e-51	32.34	uncharacterized protein LOC111020709 OS=Momordica charantia OX=3673 GN=LOC111020...	[more]
A0A5A7UHL3	1.2e-49	34.55	SWIM-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A5A7SLM1	2.2e-43	31.75	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]

BLAST of Lag0008760 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G48120.1	3.6e-09	50.94	hydrolases;protein serine/threonine phosphatases	[more]
AT1G49920.1	1.7e-06	37.88	MuDR family transposase	[more]
AT1G64255.1	1.1e-05	32.00	MuDR family transposase	[more]
AT1G17930.1	2.4e-05	43.40	Aminotransferase-like, plant mobile domain family protein	[more]
AT1G64260.1	1.2e-04	32.20	MuDR family transposase	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019557	Aminotransferase-like, plant mobile domain	PFAM	PF10536	PMD	coord: 234..326 e-value: 3.2E-13 score: 49.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0008760.1	Lag0008760.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0048507	meristem development