Lag0008714 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008714
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionPlant protein of unknown function (DUF863)
Locationchr9: 28534882 .. 28535475 (+)
RNA-Seq ExpressionLag0008714
SyntenyLag0008714
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGAAGCTGGTGGAGGAATCTTACAGTAAAGAGAATATGAAGATGGCCATGTTAAAGCACGAACAAACATTTCGTCACCAAGTACGTTTGATTGATTTCGTACTTTCTCCGTTTTCAATTTGGTTTTTTATTTTCTTTTGTGGGTCTCTTTTTTTTTTTACAGAGGAATTTCTGTTTCAGGTGTATGAACTTCACAGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACGTGAGAGAGAAAAACAGGGGAAAAACAGAGAGATGGGATGTGAAGAATGAGGATGAAGGTGAAGAAGAAGAAAAAGAGATTAATTTCATAGAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCAAGTTATAGCAATCAAATGGGAAGAAGAAGAAGGAAGAAATTGGGAGAAATGAAAGGAGGTTCAGATTCTTCTTCTTCTTCAACCACTGGATCTGCACAAAAAAGTACAACTTTTTACAGAGATGGCTCTGAAATGGGGTTTCTGGGCTTTCTTCAGGTTGAAGATGAGATGAGGCTTTCACAGCACCATCCAAATCCATGGCTTTATCAAGTTGTAAGCCTTAATCTCACTTGA

mRNA sequence

ATGGCGAAGCTGGTGGAGGAATCTTACAGTAAAGAGAATATGAAGATGGCCATGTTAAAGCACGAACAAACATTTCGTCACCAAGTGTATGAACTTCACAGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACGTGAGAGAGAAAAACAGGGGAAAAACAGAGAGATGGGATGTGAAGAATGAGGATGAAGGTGAAGAAGAAGAAAAAGAGATTAATTTCATAGAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCAAGTTATAGCAATCAAATGGGAAGAAGAAGAAGGAAGAAATTGGGAGAAATGAAAGGAGGTTCAGATTCTTCTTCTTCTTCAACCACTGGATCTGCACAAAAAAGTACAACTTTTTACAGAGATGGCTCTGAAATGGGGTTTCTGGGCTTTCTTCAGGTTGAAGATGAGATGAGGCTTTCACAGCACCATCCAAATCCATGGCTTTATCAAGTTGTAAGCCTTAATCTCACTTGA

Coding sequence (CDS)

ATGGCGAAGCTGGTGGAGGAATCTTACAGTAAAGAGAATATGAAGATGGCCATGTTAAAGCACGAACAAACATTTCGTCACCAAGTGTATGAACTTCACAGATTGTACAGAATTCAGAAGGTTTTGATGAAGAACGTGAGAGAGAAAAACAGGGGAAAAACAGAGAGATGGGATGTGAAGAATGAGGATGAAGGTGAAGAAGAAGAAAAAGAGATTAATTTCATAGAGGAAAGTGAGATTGAATTGACATTGGGGCCTTCAAGTTATAGCAATCAAATGGGAAGAAGAAGAAGGAAGAAATTGGGAGAAATGAAAGGAGGTTCAGATTCTTCTTCTTCTTCAACCACTGGATCTGCACAAAAAAGTACAACTTTTTACAGAGATGGCTCTGAAATGGGGTTTCTGGGCTTTCTTCAGGTTGAAGATGAGATGAGGCTTTCACAGCACCATCCAAATCCATGGCTTTATCAAGTTGTAAGCCTTAATCTCACTTGA

Protein sequence

MAKLVEESYSKENMKMAMLKHEQTFRHQVYELHRLYRIQKVLMKNVREKNRGKTERWDVKNEDEGEEEEKEINFIEESEIELTLGPSSYSNQMGRRRRKKLGEMKGGSDSSSSSTTGSAQKSTTFYRDGSEMGFLGFLQVEDEMRLSQHHPNPWLYQVVSLNLT
Homology
BLAST of Lag0008714 vs. NCBI nr
Match: KAG6605202.1 (hypothetical protein SDJN03_02519, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 217.6 bits (553), Expect = 7.9e-53
Identity = 130/172 (75.58%), Postives = 143/172 (83.14%), Query Frame = 0

Query: 1   MAKLVE-ESYSKENMKMAMLKHEQTFRHQVYELHRLYRIQKVLMKNVREKNRGKTERWDV 60
           MAKL E ES SKENMK AMLKHEQTFRHQVYELHRLYRIQK+LMKN+ E NRGKTERW+V
Sbjct: 1   MAKLAEQESQSKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITE-NRGKTERWEV 60

Query: 61  KNEDEGEEEEKEINFIEESEIELTLGPSSYSNQM--GRRRRKKLGEMKGGSDSSSSSTTG 120
           KNEDE EE+EKE +FIEESE+ELTLGPS+YSNQ+  GRRRR+K       S SSSSSTTG
Sbjct: 61  KNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRRRK----SCFSSSSSSSTTG 120

Query: 121 SAQKSTTFYRDG-----SEMGFLGFLQVEDEMRLSQHHPNPWLYQVVSLNLT 165
           SAQKS +FYR G     SEMGF+GFL  EDEMRLSQHHPNPWL Q ++LNLT
Sbjct: 121 SAQKSRSFYRHGELVGSSEMGFVGFL--EDEMRLSQHHPNPWLCQPLTLNLT 165

BLAST of Lag0008714 vs. NCBI nr
Match: XP_022947587.1 (uncharacterized protein LOC111451410 [Cucurbita moschata])

HSP 1 Score: 217.2 bits (552), Expect = 1.0e-52
Identity = 130/172 (75.58%), Postives = 143/172 (83.14%), Query Frame = 0

Query: 1   MAKLVE-ESYSKENMKMAMLKHEQTFRHQVYELHRLYRIQKVLMKNVREKNRGKTERWDV 60
           MAKL E ES SKENMK AMLKHEQTFRHQVYELHRLYRIQK+LMKN+ E NRGKTERW+V
Sbjct: 1   MAKLAEQESESKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITE-NRGKTERWEV 60

Query: 61  KNEDEGEEEEKEINFIEESEIELTLGPSSYSNQM--GRRRRKKLGEMKGGSDSSSSSTTG 120
           KNEDE EE+EKE +FIEESE+ELTLGPS+YSNQ+  GRRRR+K       S SSSSSTTG
Sbjct: 61  KNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRRRK----SCFSSSSSSSTTG 120

Query: 121 SAQKSTTFYRDG-----SEMGFLGFLQVEDEMRLSQHHPNPWLYQVVSLNLT 165
           SAQKS +FYR G     SEMGF+GFL  EDEMRLSQHHPNPWL Q ++LNLT
Sbjct: 121 SAQKSRSFYRHGELVGSSEMGFVGFL--EDEMRLSQHHPNPWLCQPLTLNLT 165

BLAST of Lag0008714 vs. NCBI nr
Match: XP_038902582.1 (uncharacterized protein LOC120089237 [Benincasa hispida])

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52
Identity = 129/181 (71.27%), Postives = 142/181 (78.45%), Query Frame = 0

Query: 1   MAKLVEESYSKENMKMAMLKHEQTFRHQVYELHRLYRIQKVLMKNVREKNRGKTERWDVK 60
           MA L+E+SYSK NMKMAML HEQTFRHQVYELHRLYRIQK+LMKN+REKNRGKTE     
Sbjct: 1   MANLLEQSYSKHNMKMAMLNHEQTFRHQVYELHRLYRIQKMLMKNIREKNRGKTE----- 60

Query: 61  NEDEGEEEEKEINFIEESEIELTLGPSSYSNQMG------RRRRKKLGEMKGGSDS---- 120
            E+E EE E+EI+FIEESEIELTLGPS+YSNQ+G      RRR KKLGE   GSDS    
Sbjct: 61  EEEEEEEGEEEIDFIEESEIELTLGPSNYSNQIGGKTGRRRRRMKKLGE---GSDSGMSF 120

Query: 121 --SSSSTTGSAQKSTTFYR-----DGSEMGFLGFLQVEDEMRLSQHHPNPWLYQVVSLNL 165
             SSSST GSAQK   FYR     DGS+MGFLGFL V+DE++LS HHPNPWL QVVSLNL
Sbjct: 121 SASSSSTNGSAQKIKQFYRDGEFVDGSQMGFLGFLDVQDEIKLSHHHPNPWLCQVVSLNL 173

BLAST of Lag0008714 vs. NCBI nr
Match: KAG7035180.1 (hypothetical protein SDJN02_01975, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 216.9 bits (551), Expect = 1.3e-52
Identity = 130/172 (75.58%), Postives = 143/172 (83.14%), Query Frame = 0

Query: 1   MAKLVE-ESYSKENMKMAMLKHEQTFRHQVYELHRLYRIQKVLMKNVREKNRGKTERWDV 60
           MAKL E ES SKENMK AMLKHEQTFRHQVYELHRLYRIQK+LMKN+ E NRGKTERW+V
Sbjct: 1   MAKLAEQESQSKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNIIE-NRGKTERWEV 60

Query: 61  KNEDEGEEEEKEINFIEESEIELTLGPSSYSNQM--GRRRRKKLGEMKGGSDSSSSSTTG 120
           KNEDE EE+EKE +FIEESE+ELTLGPS+YSNQ+  GRRRR+K       S SSSSSTTG
Sbjct: 61  KNEDEDEEDEKESDFIEESEVELTLGPSNYSNQVGGGRRRRRK----SCFSSSSSSSTTG 120

Query: 121 SAQKSTTFYRDG-----SEMGFLGFLQVEDEMRLSQHHPNPWLYQVVSLNLT 165
           SAQKS +FYR G     SEMGF+GFL  EDEMRLSQHHPNPWL Q ++LNLT
Sbjct: 121 SAQKSRSFYRHGELVGSSEMGFVGFL--EDEMRLSQHHPNPWLCQPLTLNLT 165

BLAST of Lag0008714 vs. NCBI nr
Match: XP_023534353.1 (uncharacterized protein LOC111795940 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 214.9 bits (546), Expect = 5.1e-52
Identity = 129/172 (75.00%), Postives = 142/172 (82.56%), Query Frame = 0

Query: 1   MAKLVE-ESYSKENMKMAMLKHEQTFRHQVYELHRLYRIQKVLMKNVREKNRGKTERWDV 60
           MAKL E ES SKENMK AMLKHEQTFRHQVYELHRLYRIQK+LMKN+ E NRGKTERW+V
Sbjct: 1   MAKLAEQESQSKENMKNAMLKHEQTFRHQVYELHRLYRIQKLLMKNITE-NRGKTERWEV 60

Query: 61  KNEDEGEEEEKEINFIEESEIELTLGPSSYSNQM--GRRRRKKLGEMKGGSDSSSSSTTG 120
           KNEDE E+ EKE +FIEESE+ELTLGPS+YSNQ+  GRRRR+K       S SSSSSTTG
Sbjct: 61  KNEDEDEDYEKESDFIEESEVELTLGPSNYSNQVGGGRRRRRK----SCFSSSSSSSTTG 120

Query: 121 SAQKSTTFYR-----DGSEMGFLGFLQVEDEMRLSQHHPNPWLYQVVSLNLT 165
           SAQKS +FYR      GSEMGF+GFL  EDEMRLSQHHPNPWL Q ++LNLT
Sbjct: 121 SAQKSRSFYRHGELVGGSEMGFVGFL--EDEMRLSQHHPNPWLCQPLTLNLT 165

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG6605202.17.9e-5375.58hypothetical protein SDJN03_02519, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022947587.11.0e-5275.58uncharacterized protein LOC111451410 [Cucurbita moschata][more]
XP_038902582.11.3e-5271.27uncharacterized protein LOC120089237 [Benincasa hispida][more]
KAG7035180.11.3e-5275.58hypothetical protein SDJN02_01975, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_023534353.15.1e-5275.00uncharacterized protein LOC111795940 [Cucurbita pepo subsp. pepo][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 85..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 106..125
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 49..71
NoneNo IPR availablePANTHERPTHR33167FAMILY NOT NAMEDcoord: 2..164
NoneNo IPR availablePANTHERPTHR33167:SF45BNAC02G16680D PROTEINcoord: 2..164

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008714.1Lag0008714.1mRNA