Lag0008666 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008666
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionUnknown protein
Locationchr9: 27568628 .. 27570374 (-)
RNA-Seq ExpressionLag0008666
SyntenyLag0008666
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTAAAATCTCACTACCACCATCATATTTCAGCAATACAGGAAGCGCTATAGATCAAAGGGAAATTTGTAAAGCTCCGAATAAGAATACTTACAAGGTCAATATCGATGCTTATGTCAAAGATGGTGTGTTCGGTAGAGGAATAATTATCCGAAGCAAATTTGGTGAGGTTATGAAAGCAGCTCAGTTCGTTGATCCATTTCTGGAAGCTATAGAAACGGTTGAAGCTATAACCTTCCTAGAAGGGTTAGAGCTTGCAAAATTAATACGCATTCGCCTAATCTGGGTGGAAATGGATTCCATTATAGTATGGCAGTTGTTTCGGGAAATCGAAACATATGAAAACAAAACCTAAAACATTATCAAAGACATTCAACATTATCGAAATACAAGGAAGATGGAAGGGCTTTTACTAACCTGTAGATCGTCAAACCAAGCAGCCAATGCCCTAGCAGCCCACGCTCGAAGCAATCGCGCTGATGGAGTTTGGATGGAAGAAATTCGTCCTTCGTCGATTCCTGCTAGCAATAGCAACGGTAAAGAGGGAGGAAGACGGTTGATGAAGCCCTTTCTTGAGCGCGTTCTTTTCTCCGGACTTTTTTGTTTTTTGTTTTTTGTTTTTTGATTTTGTTTTTTTTTCCGTTATTTCTTCTAAAACAAATGTGCTCAAAGAATCAAAGATATCTTTTAAAAGACATAAAGGACATCTATGTGAAATTGGTGAGTTTTCGGAAAATTATTCGACGGTCACTTTTGTGTTTTAAGACTAGGTGTAATTGCTCTTAGAATGTTTTCAGCATCAGCCTCAATAGAAGCCCCACTCATGACTTTGACTTGTTGCCGCCTATTCTGATGAGTACAGTCACCGAAACCTCCAAGAGACCTTATCAAGAACTATTGTCGTCTAAACACAGCCGAGGAAGCCAACATTCAATAACTTTGGACTATCGACTCACGTCAATTGATTAGCTCTGGCCATGATGAAATCCGAAATTAACAACTTCATCCTGTGGAAAAATCTATACCTTCTACCATTGCATCAGAAATGAGACTCAAATAATTCCGTAATTCAAACTCGTAGCCATTTCATTTCATAGTACTCCATTTGAAATGAGAGAAATAAAAACTTAATTAGCATCAAAACCACGAATCGCGTAACTGAAAATCATTGCAATTATAAGAAAATCTACAACCCAAATCAGCTCCAAGGAGAAGAATCGCTCCACCAAAGAAAATCAGAAGCTAAATTAATGCAAACACAAAAATGAGAGTCGTAATTCAAATAAGGATATGGTGAAAAATTCTCAGCGTACCTTTTCGTCTTTCACCTTTCAATGGAAGAAGAAGAAGAAGAGAGAAAGAAAGAAGAAAGAAAGAGCGATTACACGAGGAAGGTGATGTGGCAAAAGTCAACTACTCCACGTAGCGAGAGGTTCTGACTCAGCTAGGTCGACATGTAGTCTTGCACTTTCTGGAAATATCGACATGTTATTCAACTCACTCACACTTTTAAGTAAAATAATAGAATAGAATCGAGTCATTAGATACAAGCAACGATGAGGGGAACGGCGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCCTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGCTCTCTTCAACATCTCGATTCTGAGCCCTCTACAGCTCCCAAAGACGCCATTTCAAAGCTTGATGATTAA

mRNA sequence

ATGTCTAAAATCTCACTACCACCATCATATTTCAGCAATACAGGAAGCGCTATAGATCAAAGGGAAATTTGTAAAGCTCCGAATAAGAATACTTACAAGGTCAATATCGATGCTTATGTCAAAGATGGTGTGTTCGGTAGAGGAATAATTATCCGAAGCAAATTTGGTGAGGTTATGAAAGCAGCTCAGTTCGTTGATCCATTTCTGGAAGCTATAGAAACGGTTGAAGCTATAACCTTCCTAGAAGGATCGTCAAACCAAGCAGCCAATGCCCTAGCAGCCCACGCTCGAAGCAATCGCGCTGATGGAGTTTGGATGGAAGAAATTCGTCCTTCGTCGATTCCTGCTAGCAATAGCAACGCGTACCTTTTCGTCTTTCACCTTTCAATGGAAGAAGAAGAAGAAGAGAGAAAGAAAGAAGAAAGAAAGAGCGATTACACGAGGAAGATACAAGCAACGATGAGGGGAACGGCGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCCTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGCTCTCTTCAACATCTCGATTCTGAGCCCTCTACAGCTCCCAAAGACGCCATTTCAAAGCTTGATGATTAA

Coding sequence (CDS)

ATGTCTAAAATCTCACTACCACCATCATATTTCAGCAATACAGGAAGCGCTATAGATCAAAGGGAAATTTGTAAAGCTCCGAATAAGAATACTTACAAGGTCAATATCGATGCTTATGTCAAAGATGGTGTGTTCGGTAGAGGAATAATTATCCGAAGCAAATTTGGTGAGGTTATGAAAGCAGCTCAGTTCGTTGATCCATTTCTGGAAGCTATAGAAACGGTTGAAGCTATAACCTTCCTAGAAGGATCGTCAAACCAAGCAGCCAATGCCCTAGCAGCCCACGCTCGAAGCAATCGCGCTGATGGAGTTTGGATGGAAGAAATTCGTCCTTCGTCGATTCCTGCTAGCAATAGCAACGCGTACCTTTTCGTCTTTCACCTTTCAATGGAAGAAGAAGAAGAAGAGAGAAAGAAAGAAGAAAGAAAGAGCGATTACACGAGGAAGATACAAGCAACGATGAGGGGAACGGCGAAGTTGAATGCGGCGAGGTCCGGCTTGGTGGTGATCGGAGCTCTGGCCTTCGGATACCTGAGCCTACAGCTCGTGTTCAAGCCCTACCTCGAGAAAGCTCAAAGCTCTCTTCAACATCTCGATTCTGAGCCCTCTACAGCTCCCAAAGACGCCATTTCAAAGCTTGATGATTAA

Protein sequence

MSKISLPPSYFSNTGSAIDQREICKAPNKNTYKVNIDAYVKDGVFGRGIIIRSKFGEVMKAAQFVDPFLEAIETVEAITFLEGSSNQAANALAAHARSNRADGVWMEEIRPSSIPASNSNAYLFVFHLSMEEEEEERKKEERKSDYTRKIQATMRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKLDD
Homology
BLAST of Lag0008666 vs. NCBI nr
Match: KAG7018683.1 (hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 107.5 bits (267), Expect = 1.5e-19
Identity = 61/88 (69.32%), Postives = 71/88 (80.68%), Query Frame = 0

Query: 131 EEEEEERKKEERKSDYT---RKIQATMRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPY 190
           +++  +RKKE++KSDY    R+ +  M+  AKLNA RSG+VVIGALAFGYLSL LVFKPY
Sbjct: 8   KKKTRKRKKEQKKSDYIREGRRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPY 67

Query: 191 LEKAQSSLQHLDSEPSTAPKDAISKLDD 216
           LEKAQSSLQH DSEPST PKDAIS  DD
Sbjct: 68  LEKAQSSLQHPDSEPSTIPKDAISNRDD 95

BLAST of Lag0008666 vs. NCBI nr
Match: KGN57013.1 (hypothetical protein Csa_010432 [Cucumis sativus])

HSP 1 Score: 101.7 bits (252), Expect = 8.2e-18
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0

Query: 154 MRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKL 213
           M+ TAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQH + EPST PKDAIS L
Sbjct: 1   MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60

Query: 214 D 215
           D
Sbjct: 61  D 61

BLAST of Lag0008666 vs. NCBI nr
Match: KAG6582279.1 (hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 95.1 bits (235), Expect = 7.7e-16
Identity = 51/68 (75.00%), Postives = 56/68 (82.35%), Query Frame = 0

Query: 148 RKIQATMRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPK 207
           R+ +  M+  AKLNA RSG+VVIGALAFGYLSL LVFKPYLEKAQ SLQH +SEPST PK
Sbjct: 5   RRRREPMKEAAKLNAVRSGVVVIGALAFGYLSLHLVFKPYLEKAQGSLQHPNSEPSTIPK 64

Query: 208 DAISKLDD 216
           DAIS  DD
Sbjct: 65  DAISNRDD 72

BLAST of Lag0008666 vs. NCBI nr
Match: KAA0049387.1 (hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK17172.1 hypothetical protein E5676_scaffold434G00160 [Cucumis melo var. makuwa])

HSP 1 Score: 88.6 bits (218), Expect = 7.2e-14
Identity = 48/61 (78.69%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 154 MRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKL 213
           M+ TAKLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQS LQH + EPST  KDA+S  
Sbjct: 1   MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQSYLQHPEPEPSTILKDAVSNP 60

Query: 214 D 215
           D
Sbjct: 61  D 61

BLAST of Lag0008666 vs. NCBI nr
Match: KAG6428064.1 (hypothetical protein SASPL_112313 [Salvia splendens])

HSP 1 Score: 73.2 bits (178), Expect = 3.1e-09
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 154 MRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAIS 212
           MRGTAK NA RSGLVVIGALAFGYL+L L FKPYLEKAQ   QH  +  S+ P D  +
Sbjct: 1   MRGTAKANAMRSGLVVIGALAFGYLTLHLGFKPYLEKAQLEQQHQSAAASSQPVDTFA 58

BLAST of Lag0008666 vs. ExPASy TrEMBL
Match: A0A0A0L5N1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1)

HSP 1 Score: 101.7 bits (252), Expect = 4.0e-18
Identity = 54/61 (88.52%), Postives = 56/61 (91.80%), Query Frame = 0

Query: 154 MRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKL 213
           M+ TAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQH + EPST PKDAIS L
Sbjct: 1   MKETAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHPEPEPSTIPKDAISNL 60

Query: 214 D 215
           D
Sbjct: 61  D 61

BLAST of Lag0008666 vs. ExPASy TrEMBL
Match: A0A5A7U4W2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold434G00160 PE=4 SV=1)

HSP 1 Score: 88.6 bits (218), Expect = 3.5e-14
Identity = 48/61 (78.69%), Postives = 52/61 (85.25%), Query Frame = 0

Query: 154 MRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAISKL 213
           M+ TAKLNAARSGLVVIGALAFGYLSLQ+ FKPYLEKAQS LQH + EPST  KDA+S  
Sbjct: 1   MKETAKLNAARSGLVVIGALAFGYLSLQVGFKPYLEKAQSYLQHPEPEPSTILKDAVSNP 60

Query: 214 D 215
           D
Sbjct: 61  D 61

BLAST of Lag0008666 vs. ExPASy TrEMBL
Match: A0A4D9A3A6 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1)

HSP 1 Score: 73.2 bits (178), Expect = 1.5e-09
Identity = 39/58 (67.24%), Postives = 43/58 (74.14%), Query Frame = 0

Query: 154 MRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAIS 212
           MRGTAK NA RSGLVVIGALAFGYL+L L FKPYLEKAQ   QH  +  S+ P D  +
Sbjct: 1   MRGTAKANAMRSGLVVIGALAFGYLTLHLGFKPYLEKAQLEQQHQSAAASSQPVDTFA 58

BLAST of Lag0008666 vs. ExPASy TrEMBL
Match: W9R337 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07
Identity = 32/52 (61.54%), Postives = 43/52 (82.69%), Query Frame = 0

Query: 154 MRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTA 206
           MR   K+NA RSG+VV+GA+AFGYL+L L FKP+LEKAQ S++H  S+PS++
Sbjct: 1   MRDRRKMNAMRSGVVVVGAMAFGYLTLYLGFKPFLEKAQLSVEHSQSQPSSS 52

BLAST of Lag0008666 vs. ExPASy TrEMBL
Match: A0A4D9BKZ9 (Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_022138 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 1.4e-07
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 0

Query: 154 MRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKDAIS 212
           MRGTAK NA RS +VVIGALAFGYL+L L FKPYLEKAQ   Q   +  S+ P D  +
Sbjct: 1   MRGTAKANAMRSAVVVIGALAFGYLTLHLGFKPYLEKAQLEQQRQSAAASSQPVDTFA 58

BLAST of Lag0008666 vs. TAIR 10
Match: AT5G19151.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 50.1 bits (118), Expect = 2.6e-06
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0

Query: 154 MRGTAKLNAARSGLVVIGALAFGYLSLQLVFKPYLEKAQSSLQHLDSEPSTAPKD 209
           M+ T   NA RS +VV+G+LAFGYLSL+L +KP+LEKA+   + L S      +D
Sbjct: 1   MKRTVMDNAIRSSVVVLGSLAFGYLSLELGYKPFLEKAEQYERSLQSSQQHQQQD 55

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7018683.11.5e-1969.32hypothetical protein SDJN02_20554, partial [Cucurbita argyrosperma subsp. argyro... [more]
KGN57013.18.2e-1888.52hypothetical protein Csa_010432 [Cucumis sativus][more]
KAG6582279.17.7e-1675.00hypothetical protein SDJN03_22281, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0049387.17.2e-1478.69hypothetical protein E6C27_scaffold171G006320 [Cucumis melo var. makuwa] >TYK171... [more]
KAG6428064.13.1e-0967.24hypothetical protein SASPL_112313 [Salvia splendens][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0L5N14.0e-1888.52Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G149930 PE=4 SV=1[more]
A0A5A7U4W23.5e-1478.69Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A4D9A3A61.5e-0967.24Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_033849 PE=4 SV=1[more]
W9R3371.4e-0761.54Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_007349 PE=4 SV=1[more]
A0A4D9BKZ91.4e-0762.07Uncharacterized protein OS=Salvia splendens OX=180675 GN=Saspl_022138 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT5G19151.12.6e-0649.09unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 195..215
NoneNo IPR availablePANTHERPTHR33982:SF4OS05G0532800 PROTEINcoord: 154..208
IPR038944Outer envelope membrane protein 7-likePANTHERPTHR33982OUTER ENVELOPE MEMBRANE PROTEIN 7-RELATEDcoord: 154..208

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008666.1Lag0008666.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane