Lag0008640 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0008640
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr9: 27034230 .. 27037312 (-)
RNA-Seq Expression	Lag0008640
Synteny	Lag0008640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGCGAGAAAAATGGCTTGGAAGGGTGCTGCAGGAGCGCCAAGACGCCAAACACTAGCGTCTCGATGCTATGCTCTCAGGTCAAATGGCTGTTGCAGCTCTTATTTCAACTCCACTTCAATTCCTTTGCTTCCTTTTTGCTTCCCAAACACTCGATCACTTCCATATTCAATAATTCATTCCAAAACACGATTCCTACAAAATAAACATAAAAGAGTATGAAATTGGCCAAATAAATCTCTAAGACTAACAATAATAAATGACTGGGAGTTTATGTTGCTTATTGAATGAGTTTATGTTTATTGTTTGGTGAATTGAAATTCAACAAACTCTTTTTTTTAACTAATTTACTCTTAAGGCTATCAAATGGGTATCAAACGTGGTCTTAATTTTAAAAAACCAAAAACCAAATGGTTATCAAACAAAGCCATTATTTTTAGTTTTAAAAAATTGTCTTGGTTTTTAAAAACATGGGAAGAAGGTAGATAAAAAACAAAGAAACGTATAGGTGGAAGTAATGTTAATAGGCTTAATTTTCAAAAACAAAAAACCAAAAACTAAGACCCCATTTTATAACCATTTGGTTTTTTGTTTTTGGTTTTTGAAAATTATACTTGCATTCTCCTAATTTTCTACCATGGTTTTCATCTTTGTTAAGGACACATATGGATTCTTAGCAAAATTTCAAAAACAAAAACAAGTTTTTTAAAACTTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTTATTTAGTTTTCAAAACTTGAGTTGGTTTTTGAAAACATGGGAAAAAGGTAGATAACAAAACAAAGAAACTTATAGGTAGAAGGAGTGTTTATAGACTTCATTTTCAAAAACCAAAAACCAAAAATCAAAAACCAAATGGTTATCAAATGGTCTTAATAATTTAAGACATAATGTCTTCGAAGCATTTGTGAGTATTAATGGAAGTGAGTCATGAACACAATTTCTTTGAATTAATAAAGAATAGAAAGAAATTGTAAAAAAGATGGAAGTGTAAAAAAGATAAATAATAAAACATGGTTTTCAAATATAACAAAAAAAAAATATTAATTTCAAAATAGAGATTCTACCAAATCTTTGGAAAAACAAATTACCTTCTGTTATGGGTAATTTTGAACCACTTTGAGGTGCAAGGAGCGGACGAGGACAACCGACATGAGCCTAGAAATAGGACCGAAAATGGACTCCATAGGCGAAACGGGCCAAAAGGTCAGGCCAAGGCCGGAGGAACCGGGCCTTGGCCCGACCCCTGCTCGGCCTCGGCCATGGCCCGAGGTCTTCCGTCTCCATTTGGTCATAGGTGCTCCGATTCCACGTGTTTCAGCCCTGGATCGCCTCCGAACGCTTGACACCCTAGAGCAGGAACATGTATTTAAACTCTTCTTCATCGCTGAAGAAAGGATTCCCTAAACTCTTTCCTCTTACTTTGACCTTTTGCTCTCCTCCTTCAGCTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCAGTGTGTAGGTTTCCTGTTTTGCAGGCCACGTCTTTCCCCCTCTCATACAAATTTACTATTGGTGGCACATGAAGGTCAGGTGAGTTCCTCCTGTCCAGATTTTGTCGTCAACACCTTCTTCAAATTTCTTTACTTTTAATAATATTTCATAGATGAAAGTATTTTTCAAAATATTTTTCAATGAACCTTTTTTAATAAGAATGTTTCGAGGGGAACATTTTTGAAAAGTTTTAAAGTTTATTTCAAACTCATTTTTTCAAAAAAAAAAAATTTCATTGAATAAGAATATTATTATGTTTTATTAAATATTTAGGGAAAAATACACTTTTGGTCCCTGAGGTTTGGGTTAAGTTACACTTTGGTCCCTGAGTTTTCAAACTCAACAAAAATACCCCTGAGGTTTGAGATAAGGAGCACTTTGGTCCCTGCTGTCTATTTTTCTGTTAAATACTAATGGTGGTTGACGTGACACTATTATTTTAATAAAAAAAAATTTTTTTAATTTTTTTTTTAAAAAATATTAAAATATTAAAATATTATTATTTTAATATTTTTTTTATTTATTTCTCTCTCCCTTTTCTTTCTTCCCCTCTTTCTTCCCCTCCTCCTTCTTCTTCATCTCCTTCCTCTCAACTCTGGTGGTCGGCCGGCGCCGGAAAGTTAAGTGTTTTTTTTTCTTTCTCTCATTTTCTTCTCTCTTTCCTTCATTTCTTTTTAATATTATTATTTTTTTAAAATAAAGAACGCTCTCCGGCGCCGGCGACGAGAGGAGGTGCTCCCTCTCGGTTTCGAGGAAACCCCCATATTTTCAGATCTAAAAATCAAACACCCAAAGCCAACGCACGAGAACATCGTCGCCGTCGAGTTCGTGAGTTCATATCTGAGTCCAAACCATAGAGCTCACCGCCACTCGCCGCTTTTAGTCCCGAATGAACTTCAAGGTCGCCGTCTTCGCACGAGATCGTCGCCGCCGTCGAGCAGGAATCGCACGTTCGTGAGTTCAGATTTGAGTCCAGATCCGCGCCGCTCGTCACTGAGTTCGTGAGTTCAGATCCGCACGCGTTCGCCGTTGAGTTCGTGAGTTCAGATCCGTACCATTCGTCGCCGAGTTCGTGAGTTCAGATCCGTGTGTCAGATCTGAGTTCATGAGTTTAGATCCGCTCGTCTTCGCTGAAGCTTGTGAGTTCGTGAGTTACCTTCTTTGCATGAGAATGCCGAAAAACAGAAGGAAAGGGAACGTCGGCCACAAGAACGCCGTCTTCGCTCGTGAGTTCGTGAGTTTTCGTCTTCTCTCATGAGTTCACATAAAATCTTCCCTGATTCTCCCTCTGTTAAAAAAAACAGAAGAAAGAAAAGAATGGAGAAGAAGAAGAAAGAAGAAGAGAAAAAAAAATCTGGCGGCAGTGCCGTCGACCGTTCGCCGGCAACCGACAGCAGCCGGCCACCGGAGTTTAAGAAGAAGGAGATGGGGGAGAAAGAAGAAGGAGATGGAGGAGAGAAAGAAGAAGGAGAAGAAAGAGAGAGAGAGAAAGAATTAA

mRNA sequence

ATGCCTGCGAGAAAAATGGCTTGGAAGGGTGCTGCAGGAGCGCCAAGACGCCAAACACTAGCGTCTCGATGCTATGCTCTCAGGTGCAAGGAGCGGACGAGGACAACCGACATGAGCCTAGAAATAGGACCGAAAATGGACTCCATAGGCGAAACGGGCCAAAAGGTCAGGCCAAGGCCGGAGGAACCGGGCCTTGGCCCGACCCCTGCTCGGCCTCGGCCATGGCCCGAGGTCTTCCGTCTCCATTTGGTCATAGGTGCTCCGATTCCACGTGTTTCAGCCCTGGATCGCCTCCGAACGCTTGACACCCTAGAGCAGGAACATCTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCAGTGTATCTAAAAATCAAACACCCAAAGCCAACGCACGAGAACATCGTCGCCGTCGAGTTCGTGAGTTCATATCTGAGTCCAAACCATAGAGCTCACCGCCACTCGCCGCTTTTAGTCCCGAATGAACTTCAAGGTCGCCGTCTTCGCACGAGATCGTCGCCGCCGTCGAGCAGGAATCGCACGTTCGTGAGTTCAGATTTGAGTCCAGATCCGCGCCGCTCGTCACTGAGTTCATCCGTACCATTCGTCGCCGAGTTCGTGAGTTCAGATCCGTGTGTCAGATCTGAGTTCATGAGTTTAGATCCGCTCGTCTTCGCTGAAGCTTGTGAGTTCGTGAGTTACCTTCTTTGCATGAGAATGCCGAAAAACAGAAGGAAAGGGAACGTCGGCCACAAGAACGCCGTCTTCGCTCAAGAAAGAAAAGAATGGAGAAGAAGAAGAAAGAAGAAGAGAAAAAAAAATCTGGCGGCAGTGCCGTCGACCGTTCGCCGGCAACCGACAGCAGCCGGCCACCGGAGTTTAAGAAGAAGGAGATGGGGGAGAAAGAAGAAGGAGATGGAGGAGAGAAAGAAGAAGGAGAAGAAAGAGAGAGAGAGAAAGAATTAA

Coding sequence (CDS)

ATGCCTGCGAGAAAAATGGCTTGGAAGGGTGCTGCAGGAGCGCCAAGACGCCAAACACTAGCGTCTCGATGCTATGCTCTCAGGTGCAAGGAGCGGACGAGGACAACCGACATGAGCCTAGAAATAGGACCGAAAATGGACTCCATAGGCGAAACGGGCCAAAAGGTCAGGCCAAGGCCGGAGGAACCGGGCCTTGGCCCGACCCCTGCTCGGCCTCGGCCATGGCCCGAGGTCTTCCGTCTCCATTTGGTCATAGGTGCTCCGATTCCACGTGTTTCAGCCCTGGATCGCCTCCGAACGCTTGACACCCTAGAGCAGGAACATCTTTCTGACTTAAGCATCGGAGGCGGTGTGGCAAGCACCACACCAGTGTATCTAAAAATCAAACACCCAAAGCCAACGCACGAGAACATCGTCGCCGTCGAGTTCGTGAGTTCATATCTGAGTCCAAACCATAGAGCTCACCGCCACTCGCCGCTTTTAGTCCCGAATGAACTTCAAGGTCGCCGTCTTCGCACGAGATCGTCGCCGCCGTCGAGCAGGAATCGCACGTTCGTGAGTTCAGATTTGAGTCCAGATCCGCGCCGCTCGTCACTGAGTTCATCCGTACCATTCGTCGCCGAGTTCGTGAGTTCAGATCCGTGTGTCAGATCTGAGTTCATGAGTTTAGATCCGCTCGTCTTCGCTGAAGCTTGTGAGTTCGTGAGTTACCTTCTTTGCATGAGAATGCCGAAAAACAGAAGGAAAGGGAACGTCGGCCACAAGAACGCCGTCTTCGCTCAAGAAAGAAAAGAATGGAGAAGAAGAAGAAAGAAGAAGAGAAAAAAAAATCTGGCGGCAGTGCCGTCGACCGTTCGCCGGCAACCGACAGCAGCCGGCCACCGGAGTTTAAGAAGAAGGAGATGGGGGAGAAAGAAGAAGGAGATGGAGGAGAGAAAGAAGAAGGAGAAGAAAGAGAGAGAGAGAAAGAATTAA

Protein sequence

MPARKMAWKGAAGAPRRQTLASRCYALRCKERTRTTDMSLEIGPKMDSIGETGQKVRPRPEEPGLGPTPARPRPWPEVFRLHLVIGAPIPRVSALDRLRTLDTLEQEHLSDLSIGGGVASTTPVYLKIKHPKPTHENIVAVEFVSSYLSPNHRAHRHSPLLVPNELQGRRLRTRSSPPSSRNRTFVSSDLSPDPRRSSLSSSVPFVAEFVSSDPCVRSEFMSLDPLVFAEACEFVSYLLCMRMPKNRRKGNVGHKNAVFAQERKEWRRRRKKKRKKNLAAVPSTVRRQPTAAGHRSLRRRRWGRKKKEMEERKKKEKKERERKN

Homology

The following BLAST results are available for this feature:

BLAST of Lag0008640 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0008640 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0008640 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0008640 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 299..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 265..280
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 264..324
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 43..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 153..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 292..308
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 169..200
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 309..324

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0008640.1	Lag0008640.1	mRNA