Lag0008613 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0008613
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	protein FAR-RED ELONGATED HYPOCOTYL 3-like
Location	chr9: 26527849 .. 26529053 (+)
RNA-Seq Expression	Lag0008613
Synteny	Lag0008613

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTTAGTGGGAAGATTAATTTACAGAATGCATTGCATTCCATTGCATTGATTGACAACTTTCAGTACAAAACTGTAAAATCCAATCATGAGAAGTTGGTTGTCAGATGTGGTTTCGAAAATTGCAGTTGGATTATTCATGCATATCGATACGGGGATGAAAAAAGTGAAACATGGATTATCAAGAAGTTAGTTAGTGATCATACATGCTCTCTAGACGTTGTATTGAATAATCATAAACAAGCAACAACCTCTATGATTGAAGAATGTATCAAAAGCAAAATTTCCATCACTGGCAGTGAATTGAAAACTCCGAAGGATATCGTGGCATACATTCGTTCAGAGTTTGGCATCCACATTAGTTACCAAAAAGCGTGGCGTGCCTGTGAAGCAGCTCTTAATGAAATTAGAGGATCACCTGCAGATTCTTATTCCAAGATCCCTTCATTCTGCCATATGCTGAAGTTAAAAAATCCAGGTACTTTTTATATATACCGAAGTATATGTTCTAATCTAGATATTATATAACGATTTAAATAAACACCCAGTATACATCATATAATGCAGGTACTTTTTTATATATACTGTATTATATGTTCTAATTTAGGTATTTATATCATATATTGTAGGTACATTTTCTACATACAAACTCGACGTAGATGGAAGATTTTTCTACTTTTTTTGTCACTGTCTGCTTCAATTTCTGGATGGAAGCATTGTAGACCTGTTATCTTGGTTGATGGCACTTTCTTAAAGAATAAGTTCGCTGGTTATTTATTGACTGTTGTATCTATTGATGGAAATGACCAGATATTCCCATTGGGTTGTGCAATAGTTGATTCAGAGAATGATTTATCATGGGAATGGTTTTTTGTTCAACTAAAGGCGACCATTGGTGTGTGAGAAGATCTTGTTTTGTGTCTGATAGACACAAGAGTATATTGAAAACCATTCCCAAGGTATTTCCTACTACTTTTCATGGAGTTTGTATTGTTCACTTGTTGAGGAACTTAAGGGAGAAGTACAAGGGCGATATTGTCGGTGAGTTATATTATTCAACAGCTAAGGCATTCAATAAGAAGGATTTTGAACATAACATGCAACAGTTAGAAGACAGTGCACCCAGCATTCGTGATGATTTGGAATCAATCGGTTTTTCAAAATGGTCTAGTGCATTTTCTACCCGTCGTAGATATACATTATGA

mRNA sequence

ATGTTTAGTGGGAAGATTAATTTACAGAATGCATTGCATTCCATTGCATTGATTGACAACTTTCAGTACAAAACTGTAAAATCCAATCATGAGAAGTTGGTTGTCAGATGTGGTTTCGAAAATTGCAGTTGGATTATTCATGCATATCGATACGGGGATGAAAAAAGTGAAACATGGATTATCAAGAAGTTAGTTAGTGATCATACATGCTCTCTAGACGTTGTATTGAATAATCATAAACAAGCAACAACCTCTATGATTGAAGAATGTATCAAAAGCAAAATTTCCATCACTGGCAGTGAATTGAAAACTCCGAAGGATATCGTGGCATACATTCGTTCAGAGTTTGGCATCCACATTAGTTACCAAAAAGCGTGGCGTGCCTGTGAAGCAGCTCTTAATGAAATTAGAGGATCACCTGCAGATTCTTATTCCAAGATCCCTTCATTCTGCCATATGCTGAAGTTAAAAAATCCAGGCGACCATTGGTGTGTGAGAAGATCTTGTTTTGTGTCTGATAGACACAAGAGTATATTGAAAACCATTCCCAAGGTATTTCCTACTACTTTTCATGGAGTTTGTATTGTTCACTTGTTGAGGAACTTAAGGGAGAAGTACAAGGGCGATATTGTCGGTGAGTTATATTATTCAACAGCTAAGGCATTCAATAAGAAGGATTTTGAACATAACATGCAACAGTTAGAAGACAGTGCACCCAGCATTCGTGATGATTTGGAATCAATCGGTTTTTCAAAATGGTCTAGTGCATTTTCTACCCGTCGTAGATATACATTATGA

Coding sequence (CDS)

ATGTTTAGTGGGAAGATTAATTTACAGAATGCATTGCATTCCATTGCATTGATTGACAACTTTCAGTACAAAACTGTAAAATCCAATCATGAGAAGTTGGTTGTCAGATGTGGTTTCGAAAATTGCAGTTGGATTATTCATGCATATCGATACGGGGATGAAAAAAGTGAAACATGGATTATCAAGAAGTTAGTTAGTGATCATACATGCTCTCTAGACGTTGTATTGAATAATCATAAACAAGCAACAACCTCTATGATTGAAGAATGTATCAAAAGCAAAATTTCCATCACTGGCAGTGAATTGAAAACTCCGAAGGATATCGTGGCATACATTCGTTCAGAGTTTGGCATCCACATTAGTTACCAAAAAGCGTGGCGTGCCTGTGAAGCAGCTCTTAATGAAATTAGAGGATCACCTGCAGATTCTTATTCCAAGATCCCTTCATTCTGCCATATGCTGAAGTTAAAAAATCCAGGCGACCATTGGTGTGTGAGAAGATCTTGTTTTGTGTCTGATAGACACAAGAGTATATTGAAAACCATTCCCAAGGTATTTCCTACTACTTTTCATGGAGTTTGTATTGTTCACTTGTTGAGGAACTTAAGGGAGAAGTACAAGGGCGATATTGTCGGTGAGTTATATTATTCAACAGCTAAGGCATTCAATAAGAAGGATTTTGAACATAACATGCAACAGTTAGAAGACAGTGCACCCAGCATTCGTGATGATTTGGAATCAATCGGTTTTTCAAAATGGTCTAGTGCATTTTCTACCCGTCGTAGATATACATTATGA

Protein sequence

MFSGKINLQNALHSIALIDNFQYKTVKSNHEKLVVRCGFENCSWIIHAYRYGDEKSETWIIKKLVSDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHISYQKAWRACEAALNEIRGSPADSYSKIPSFCHMLKLKNPGDHWCVRRSCFVSDRHKSILKTIPKVFPTTFHGVCIVHLLRNLREKYKGDIVGELYYSTAKAFNKKDFEHNMQQLEDSAPSIRDDLESIGFSKWSSAFSTRRRYTL

Homology

[Close]

BLAST of Lag0008613 vs. NCBI nr
Match: XP_022134813.1 (uncharacterized protein LOC111006994 [Momordica charantia])

HSP 1 Score: 250.4 bits (638), Expect = 1.8e-62
Identity = 138/348 (39.66%), Postives = 185/348 (53.16%), Query Frame = 0


Query: 2   FSGKINLQNALHSIALIDNFQYKTVKSNHEKLVVRCGFENCSWIIHAYRYGDEKSETWII 61
           F GK NLQNAL S+A+  NF ++TVKSN E L+V C   NC W +HA ++GD+ SE WI+
Sbjct: 118 FCGKRNLQNALRSVAIRXNFXFRTVKSNREVLIVXCLTNNCQWFLHASKFGDKGSEIWIV 177

Query: 62  KKLVSDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHIS 121
           KK V +HTCSL++VLN+H+QAT S+I+E IK +I+  G++L + KD ++++  E  I I+
Sbjct: 178 KKFVHEHTCSLEIVLNDHRQATFSVIKEFIKGRINXXGTDLPSVKDXISHVHRELXISIN 237

Query: 122 YQKAWRACEAALNEIRGSPADSYSKIPSFCHMLKLKNPGD-------------------- 181
           YQKA  A E A+ EIRGSP  SY+ IP FCHM+K KNPG                     
Sbjct: 238 YQKAXXAREXAIKEIRGSPEXSYALIPXFCHMIKXKNPGSVCDFKXDNNGRFZYJFMAXS 297

Query: 182 ------HWC--------------------------------------------------- 241
                  +C                                                   
Sbjct: 298 SSISGWKYCXPVISVDGTSMKNKYAGTLISACTLDANHQIFPLAFSVXDSENDASWVXFF 357

Query: 242 --------VRRS-CFVSDRHKSILKTIPKVFPTTFHGVCIVHLLRNLREKYKGDIVGELY 264
                   VR+    VSDRHKSI K+  KVF T  H +C  HL +NL+ KYK  +   L+
Sbjct: 358 EQLKRCIGVRQDLVIVSDRHKSIGKSAEKVFTTACHCICAYHLFKNLKLKYKDKVSDNLF 417

[Close]

BLAST of Lag0008613 vs. NCBI nr
Match: XP_022155207.1 (uncharacterized protein LOC111022347 [Momordica charantia])

HSP 1 Score: 221.1 bits (562), Expect = 1.1e-53
Identity = 115/297 (38.72%), Postives = 166/297 (55.89%), Query Frame = 0


Query: 2   FSGKINLQNALHSIALIDNFQYKTVKSNHEKLVVRCGFENCSWIIHAYRYGDEKSETWII 61
           F GK NLQNAL S+A+ DNFQ++T+KSN + L+VR   +NC W +HA ++GD+ SE WI+
Sbjct: 145 FCGKKNLQNALRSVAIRDNFQFRTIKSNRDVLIVRFFMDNCQWYLHASKFGDQGSEIWIV 204

Query: 62  KKLVSDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHIS 121
           KK V +HTCSL++VLN+H+QAT S+I+E IK + ++ G++L + KD+++++R   GI I+
Sbjct: 205 KKFVQEHTCSLEIVLNDHRQATFSVIKEFIKDRTNMFGTDLLSVKDVISHVRRGLGISIN 264

Query: 122 YQKAWRACEAALNEIRGSPADSYSKIPSFCHMLKLKNPGD-------------------- 181
           YQKAWR  ++A+ EI+GSP +SY+ +PSFCHM+K+KNPG                     
Sbjct: 265 YQKAWRVRKSAIKEIKGSPEESYALVPSFCHMIKVKNPGSVCDFKVDNHGRFHYLFMALS 324

Query: 182 ------HWC-VRRSCF--------VSDRHKSILKTIPKVFPTTFHGVCIVHLLRNLREKY 241
                  +C   + C         V DRHKSI+K+  KVF T  H +C  +  R+     
Sbjct: 325 SSIDGYQYCRPLKPCIGPRQDLVTVFDRHKSIVKSAEKVFTTACHCICAFYCTRH----- 384

Query: 242 KGDIVGELYYSTAKAFNKKDFEHNMQQLEDSAPSIRDDLESIGFSKWSSAFSTRRRY 264
                                               ++L  IGFSKWS A+S   RY
Sbjct: 385 -----------------------------------SEELSGIGFSKWSYAYSPSSRY 401

[Close]

BLAST of Lag0008613 vs. NCBI nr
Match: XP_008450197.1 (PREDICTED: uncharacterized protein LOC103491857 [Cucumis melo])

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-50
Identity = 117/253 (46.25%), Postives = 151/253 (59.68%), Query Frame = 0


Query: 66  SDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHISYQKA 125
           S+HTCS+D+ L +H+QAT ++I++ I++KIS+ GSEL TPKDIV +IRSE G+ ISYQKA
Sbjct: 23  SEHTCSIDIPLTDHRQATFTVIKDLIRNKISLAGSELSTPKDIVHFIRSEHGLSISYQKA 82

Query: 126 WRACEAALNEIRGSPADSYSKIPSFCHMLKLKNP-------------------------G 185
           WRACE AL++I  SP DSY  +P F ++LKL NP                          
Sbjct: 83  WRACEVALDDIHESPKDSYKILPKFAYILKLNNPIISIDGTSLKNKYGGTLLSASTPDAN 142

Query: 186 DH-----WCVRRS-----------------------CFVSDRHKSILKTIPKVFPTTFHG 245
           D       CV  S                         +SDRHKSI K I  VFP   H 
Sbjct: 143 DQIFPLALCVVDSKNDSPLIWFWNQLKRIIGGRNEVVIISDRHKSICKAIEIVFPDVLHC 202

Query: 246 VCIVHLLRNLREKYKGDIVGELYYSTAKAFNKKDFEHNMQQLEDSAPSIRDDLESIGFSK 266
           +C+VHLLRNL+ KYK  I+  +++S  KAFN  DF+H M+ LE SAP IR++LESIGF+K
Sbjct: 203 ICLVHLLRNLKLKYK-RIMDIVFHSCGKAFNIVDFKHKMRLLESSAPGIREELESIGFAK 262

[Close]

BLAST of Lag0008613 vs. NCBI nr
Match: KAA0051287.1 (protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa])

HSP 1 Score: 204.1 bits (518), Expect = 1.5e-48
Identity = 119/265 (44.91%), Postives = 153/265 (57.74%), Query Frame = 0


Query: 1   MFSGKINLQNALHSIALIDNFQYKTVKSNHEKLVVRCGFENCSWIIHAYRYGDEKSETWI 60
           MFS K   +  +H     D FQY TVKSN E ++++   E+  W + A  Y         
Sbjct: 15  MFSTKSLFKQCVHK----DTFQYITVKSNKEVMILQSVIEDYKWSLRASGY--------- 74

Query: 61  IKKLVSDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHI 120
                             H+Q T ++I++ IK+KIS+ G EL TPKDIV YIR+E G+ I
Sbjct: 75  ------------------HRQVTFTVIKDLIKNKISLAGFELSTPKDIVHYIRAEHGLRI 134

Query: 121 SYQKAWRACEAALNEIRGSPADSYSKIPSFCHMLKLKNPGDHWCVRRSCFVSDRHKSILK 180
           SYQKA  A EA LNEIRGSP DSY  I  F ++                 VSDRHKSI K
Sbjct: 135 SYQKALLAREAVLNEIRGSPEDSYKMILQFAYIWNSTTQRIIDDRNEVVIVSDRHKSICK 194

Query: 181 TIPKVFPTTFHGVCIVHLLRNLREKYKGDIVGELYYSTAKAFNKKDFEHNMQQLEDSAPS 240
            +  VFP   H +C+VHLLRNL+ KYK  IV  ++++  KAFN  DF+H M+ LE S PS
Sbjct: 195 AMEVVFPNVGHCMCLVHLLRNLKLKYK-IIVDTVFHACEKAFNIVDFKHEMRLLESSVPS 247

Query: 241 IRDDLESIGFSKWSSAFSTRRRYTL 266
           IR++LESIGF+KWS A+S RR Y +
Sbjct: 255 IREELESIGFAKWSRAYSPRRIYNV 247

[Close]

BLAST of Lag0008613 vs. NCBI nr
Match: XP_022159005.1 (uncharacterized protein LOC111025451 [Momordica charantia])

HSP 1 Score: 201.4 bits (511), Expect = 9.4e-48
Identity = 118/308 (38.31%), Postives = 165/308 (53.57%), Query Frame = 0


Query: 2   FSGKINLQNALHSIALIDNFQYKTVKSNHEKLVVRCGFENCSWIIHAYRYGDEKSETWII 61
           F G  NLQNAL S+A+ DNFQ++T+KSN                    RY       W  
Sbjct: 108 FCGNRNLQNALRSMAIRDNFQFRTIKSN--------------------RY----VALW-- 167

Query: 62  KKLVSDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHIS 121
                        +LN+H+QAT S+I+E IK +I+I G++L + KD+++++R E G  I+
Sbjct: 168 ----------TTTILNDHRQATFSVIKEFIKDRINIFGTDLLSVKDVISHVR-ELGTSIN 227

Query: 122 YQKAWRACEAALNEIRGSPADSYSKIPSFCHMLKLKNPGD-------------------- 181
           Y K WRA E A+ EIRGSP +SY+ I SFCHM+K+KNPG                     
Sbjct: 228 YHKVWRAKEYAIKEIRGSPEESYALILSFCHMIKMKNPGSVCDFKVDNHGSLHLDANDQI 287

Query: 182 ---HWCV-----------------------RRSCFVSDRHKSILKTIPKVFPTTFHGVCI 241
               +CV                       +    VS+RHKSI+K++ KVF T FH +C 
Sbjct: 288 FPLAFCVVDSENDTSWVWFFEHLKPCIGVRQNLVIVSNRHKSIVKSVEKVFTTAFHCICA 347

Query: 242 VHLLRNLREKYKGDIVGELYYSTAKAFNKKDFEHNMQQLEDSAPSIRDDLESIGFSKWSS 264
            HL +NL+ KYK  I  +L++  AKA+N +DFEHNM+ L+ +   +R++L  IGFSKWS 
Sbjct: 348 YHLFKNLKLKYKEKISDKLFFRCAKAYNIEDFEHNMRLLDSTVRGLREELSGIGFSKWSC 378

[Close]

BLAST of Lag0008613 vs. ExPASy TrEMBL
Match: A0A6J1C328 (uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006994 PE=4 SV=1)

HSP 1 Score: 250.4 bits (638), Expect = 8.6e-63
Identity = 138/348 (39.66%), Postives = 185/348 (53.16%), Query Frame = 0


Query: 2   FSGKINLQNALHSIALIDNFQYKTVKSNHEKLVVRCGFENCSWIIHAYRYGDEKSETWII 61
           F GK NLQNAL S+A+  NF ++TVKSN E L+V C   NC W +HA ++GD+ SE WI+
Sbjct: 118 FCGKRNLQNALRSVAIRXNFXFRTVKSNREVLIVXCLTNNCQWFLHASKFGDKGSEIWIV 177

Query: 62  KKLVSDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHIS 121
           KK V +HTCSL++VLN+H+QAT S+I+E IK +I+  G++L + KD ++++  E  I I+
Sbjct: 178 KKFVHEHTCSLEIVLNDHRQATFSVIKEFIKGRINXXGTDLPSVKDXISHVHRELXISIN 237

Query: 122 YQKAWRACEAALNEIRGSPADSYSKIPSFCHMLKLKNPGD-------------------- 181
           YQKA  A E A+ EIRGSP  SY+ IP FCHM+K KNPG                     
Sbjct: 238 YQKAXXAREXAIKEIRGSPEXSYALIPXFCHMIKXKNPGSVCDFKXDNNGRFEYLFMAXS 297

Query: 182 ------HWC--------------------------------------------------- 241
                  +C                                                   
Sbjct: 298 SSISGWKYCXPVISVDGTSMKNKYAGTLISACTLDANHQIFPLAFSVXDSENDASWVXFF 357

Query: 242 --------VRRS-CFVSDRHKSILKTIPKVFPTTFHGVCIVHLLRNLREKYKGDIVGELY 264
                   VR+    VSDRHKSI K+  KVF T  H +C  HL +NL+ KYK  +   L+
Sbjct: 358 EQLKRCIGVRQDLVIVSDRHKSIGKSAEKVFTTACHCICAYHLFKNLKLKYKDKVSDNLF 417

[Close]

BLAST of Lag0008613 vs. ExPASy TrEMBL
Match: A0A6J1DNQ8 (uncharacterized protein LOC111022347 OS=Momordica charantia OX=3673 GN=LOC111022347 PE=4 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 5.6e-54
Identity = 115/297 (38.72%), Postives = 166/297 (55.89%), Query Frame = 0


Query: 2   FSGKINLQNALHSIALIDNFQYKTVKSNHEKLVVRCGFENCSWIIHAYRYGDEKSETWII 61
           F GK NLQNAL S+A+ DNFQ++T+KSN + L+VR   +NC W +HA ++GD+ SE WI+
Sbjct: 145 FCGKKNLQNALRSVAIRDNFQFRTIKSNRDVLIVRFFMDNCQWYLHASKFGDQGSEIWIV 204

Query: 62  KKLVSDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHIS 121
           KK V +HTCSL++VLN+H+QAT S+I+E IK + ++ G++L + KD+++++R   GI I+
Sbjct: 205 KKFVQEHTCSLEIVLNDHRQATFSVIKEFIKDRTNMFGTDLLSVKDVISHVRRGLGISIN 264

Query: 122 YQKAWRACEAALNEIRGSPADSYSKIPSFCHMLKLKNPGD-------------------- 181
           YQKAWR  ++A+ EI+GSP +SY+ +PSFCHM+K+KNPG                     
Sbjct: 265 YQKAWRVRKSAIKEIKGSPEESYALVPSFCHMIKVKNPGSVCDFKVDNHGRFHYLFMALS 324

Query: 182 ------HWC-VRRSCF--------VSDRHKSILKTIPKVFPTTFHGVCIVHLLRNLREKY 241
                  +C   + C         V DRHKSI+K+  KVF T  H +C  +  R+     
Sbjct: 325 SSIDGYQYCRPLKPCIGPRQDLVTVFDRHKSIVKSAEKVFTTACHCICAFYCTRH----- 384

Query: 242 KGDIVGELYYSTAKAFNKKDFEHNMQQLEDSAPSIRDDLESIGFSKWSSAFSTRRRY 264
                                               ++L  IGFSKWS A+S   RY
Sbjct: 385 -----------------------------------SEELSGIGFSKWSYAYSPSSRY 401

[Close]

BLAST of Lag0008613 vs. ExPASy TrEMBL
Match: A0A1S3BN44 (uncharacterized protein LOC103491857 OS=Cucumis melo OX=3656 GN=LOC103491857 PE=4 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 5.8e-51
Identity = 117/253 (46.25%), Postives = 151/253 (59.68%), Query Frame = 0


Query: 66  SDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHISYQKA 125
           S+HTCS+D+ L +H+QAT ++I++ I++KIS+ GSEL TPKDIV +IRSE G+ ISYQKA
Sbjct: 23  SEHTCSIDIPLTDHRQATFTVIKDLIRNKISLAGSELSTPKDIVHFIRSEHGLSISYQKA 82

Query: 126 WRACEAALNEIRGSPADSYSKIPSFCHMLKLKNP-------------------------G 185
           WRACE AL++I  SP DSY  +P F ++LKL NP                          
Sbjct: 83  WRACEVALDDIHESPKDSYKILPKFAYILKLNNPIISIDGTSLKNKYGGTLLSASTPDAN 142

Query: 186 DH-----WCVRRS-----------------------CFVSDRHKSILKTIPKVFPTTFHG 245
           D       CV  S                         +SDRHKSI K I  VFP   H 
Sbjct: 143 DQIFPLALCVVDSKNDSPLIWFWNQLKRIIGGRNEVVIISDRHKSICKAIEIVFPDVLHC 202

Query: 246 VCIVHLLRNLREKYKGDIVGELYYSTAKAFNKKDFEHNMQQLEDSAPSIRDDLESIGFSK 266
           +C+VHLLRNL+ KYK  I+  +++S  KAFN  DF+H M+ LE SAP IR++LESIGF+K
Sbjct: 203 ICLVHLLRNLKLKYK-RIMDIVFHSCGKAFNIVDFKHKMRLLESSAPGIREELESIGFAK 262

[Close]

BLAST of Lag0008613 vs. ExPASy TrEMBL
Match: A0A5A7UA41 (Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold2143G00460 PE=4 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 7.0e-49
Identity = 119/265 (44.91%), Postives = 153/265 (57.74%), Query Frame = 0


Query: 1   MFSGKINLQNALHSIALIDNFQYKTVKSNHEKLVVRCGFENCSWIIHAYRYGDEKSETWI 60
           MFS K   +  +H     D FQY TVKSN E ++++   E+  W + A  Y         
Sbjct: 15  MFSTKSLFKQCVHK----DTFQYITVKSNKEVMILQSVIEDYKWSLRASGY--------- 74

Query: 61  IKKLVSDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHI 120
                             H+Q T ++I++ IK+KIS+ G EL TPKDIV YIR+E G+ I
Sbjct: 75  ------------------HRQVTFTVIKDLIKNKISLAGFELSTPKDIVHYIRAEHGLRI 134

Query: 121 SYQKAWRACEAALNEIRGSPADSYSKIPSFCHMLKLKNPGDHWCVRRSCFVSDRHKSILK 180
           SYQKA  A EA LNEIRGSP DSY  I  F ++                 VSDRHKSI K
Sbjct: 135 SYQKALLAREAVLNEIRGSPEDSYKMILQFAYIWNSTTQRIIDDRNEVVIVSDRHKSICK 194

Query: 181 TIPKVFPTTFHGVCIVHLLRNLREKYKGDIVGELYYSTAKAFNKKDFEHNMQQLEDSAPS 240
            +  VFP   H +C+VHLLRNL+ KYK  IV  ++++  KAFN  DF+H M+ LE S PS
Sbjct: 195 AMEVVFPNVGHCMCLVHLLRNLKLKYK-IIVDTVFHACEKAFNIVDFKHEMRLLESSVPS 247

Query: 241 IRDDLESIGFSKWSSAFSTRRRYTL 266
           IR++LESIGF+KWS A+S RR Y +
Sbjct: 255 IREELESIGFAKWSRAYSPRRIYNV 247

[Close]

BLAST of Lag0008613 vs. ExPASy TrEMBL
Match: A0A6J1DXF3 (uncharacterized protein LOC111025451 OS=Momordica charantia OX=3673 GN=LOC111025451 PE=4 SV=1)

HSP 1 Score: 201.4 bits (511), Expect = 4.6e-48
Identity = 118/308 (38.31%), Postives = 165/308 (53.57%), Query Frame = 0


Query: 2   FSGKINLQNALHSIALIDNFQYKTVKSNHEKLVVRCGFENCSWIIHAYRYGDEKSETWII 61
           F G  NLQNAL S+A+ DNFQ++T+KSN                    RY       W  
Sbjct: 108 FCGNRNLQNALRSMAIRDNFQFRTIKSN--------------------RY----VALW-- 167

Query: 62  KKLVSDHTCSLDVVLNNHKQATTSMIEECIKSKISITGSELKTPKDIVAYIRSEFGIHIS 121
                        +LN+H+QAT S+I+E IK +I+I G++L + KD+++++R E G  I+
Sbjct: 168 ----------TTTILNDHRQATFSVIKEFIKDRINIFGTDLLSVKDVISHVR-ELGTSIN 227

Query: 122 YQKAWRACEAALNEIRGSPADSYSKIPSFCHMLKLKNPGD-------------------- 181
           Y K WRA E A+ EIRGSP +SY+ I SFCHM+K+KNPG                     
Sbjct: 228 YHKVWRAKEYAIKEIRGSPEESYALILSFCHMIKMKNPGSVCDFKVDNHGSLHLDANDQI 287

Query: 182 ---HWCV-----------------------RRSCFVSDRHKSILKTIPKVFPTTFHGVCI 241
               +CV                       +    VS+RHKSI+K++ KVF T FH +C 
Sbjct: 288 FPLAFCVVDSENDTSWVWFFEHLKPCIGVRQNLVIVSNRHKSIVKSVEKVFTTAFHCICA 347

Query: 242 VHLLRNLREKYKGDIVGELYYSTAKAFNKKDFEHNMQQLEDSAPSIRDDLESIGFSKWSS 264
            HL +NL+ KYK  I  +L++  AKA+N +DFEHNM+ L+ +   +R++L  IGFSKWS 
Sbjct: 348 YHLFKNLKLKYKEKISDKLFFRCAKAYNIEDFEHNMRLLDSTVRGLREELSGIGFSKWSC 378

The following BLAST results are available for this feature:

BLAST of Lag0008613 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134813.1	1.8e-62	39.66	uncharacterized protein LOC111006994 [Momordica charantia]	[more]
XP_022155207.1	1.1e-53	38.72	uncharacterized protein LOC111022347 [Momordica charantia]	[more]
XP_008450197.1	1.2e-50	46.25	PREDICTED: uncharacterized protein LOC103491857 [Cucumis melo]	[more]
KAA0051287.1	1.5e-48	44.91	protein FAR1-RELATED SEQUENCE 3-like [Cucumis melo var. makuwa]	[more]
XP_022159005.1	9.4e-48	38.31	uncharacterized protein LOC111025451 [Momordica charantia]	[more]

BLAST of Lag0008613 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0008613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C328	8.6e-63	39.66	uncharacterized protein LOC111006994 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1DNQ8	5.6e-54	38.72	uncharacterized protein LOC111022347 OS=Momordica charantia OX=3673 GN=LOC111022...	[more]
A0A1S3BN44	5.8e-51	46.25	uncharacterized protein LOC103491857 OS=Cucumis melo OX=3656 GN=LOC103491857 PE=...	[more]
A0A5A7UA41	7.0e-49	44.91	Protein FAR1-RELATED SEQUENCE 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1DXF3	4.6e-48	38.31	uncharacterized protein LOC111025451 OS=Momordica charantia OX=3673 GN=LOC111025...	[more]

BLAST of Lag0008613 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004332	Transposase, MuDR, plant	PFAM	PF03108	DBD_Tnp_Mut	coord: 2..53 e-value: 1.5E-9 score: 37.7
IPR001207	Transposase, mutator type	PFAM	PF00872	Transposase_mut	coord: 170..243 e-value: 2.6E-6 score: 26.6
None	No IPR available	PANTHER	PTHR31973	POLYPROTEIN, PUTATIVE-RELATED	coord: 9..160 coord: 169..257
None	No IPR available	PANTHER	PTHR31973:SF106	OS09G0268600 PROTEIN	coord: 9..160 coord: 169..257

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0008613.1	Lag0008613.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006313	transposition, DNA-mediated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0004803	transposase activity