Lag0008602 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008602
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr9: 26254738 .. 26255526 (-)
RNA-Seq ExpressionLag0008602
SyntenyLag0008602
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGGAAGAATTGGAAAAACTAAAAATTACTTCTGTAGAAAGAGCCAAAGTGGTGGGCATAGAAGATGAGGATCTAAACGAAGCTAACGAGGATCTCCAAGGAGGGATCTTATGGAGAATCCTAACCACTGAACTCATAAATCCTGGAGTTTTCAAAACCTTTATGGCAAAAATTTGGAACAAAGAAGGACGGGTGAGAATAAAAGCAAAGGGAAGGAACACCTTCTTCTGCCAGTTCAACAACCACCACGAAAAAGAAAGAATCAAAAGAGGAGGGCTTTGGAACTACGACAAATCGTTAATGGTTATAGAAGAGGCACAAGGAGCTAGCAGAATATCTCGGATAGAATTCAGGTATGTTAGTTTTTGGGTCCATATCCACGACTTACCAACGGTTTGTATGCGCAGGAAATGGGCGGTGGAGCTCGACAACTCTTTGGGCGACTTTGAAGAAGTCAACTTAGACGAAGAGAGGGGAAGTGGGGAAAACACACTAAGGCTTCAAGTCAAAATTGATATCACTCAATCGTTAAAGAGAGGCTTGATGGTCAGAATCAGATCAAAAGCAGAGGAAACTTGGCTGAAAGTGACGTACGAACGTCTCCCCGAATTATGTTATGGTTGTGGGATGGTGGGTCATGTACAACAAGAATGCGAAGAAATGCCACAGAACACAGAAGTAGAAAACTTGTATTGGCGAATGGATGAGAGAAACACCAATCATATGAGGCCGGATAAAGCACAAACAACAAGACAACAAAAACAAAACCATATGGGGAAGAGGTAG

mRNA sequence

ATGATGGAAGAATTGGAAAAACTAAAAATTACTTCTGTAGAAAGAGCCAAAGTGGTGGGCATAGAAGATGAGGATCTAAACGAAGCTAACGAGGATCTCCAAGGAGGGATCTTATGGAGAATCCTAACCACTGAACTCATAAATCCTGGAGTTTTCAAAACCTTTATGGCAAAAATTTGGAACAAAGAAGGACGGGTGAGAATAAAAGCAAAGGGAAGGAACACCTTCTTCTGCCAGTTCAACAACCACCACGAAAAAGAAAGAATCAAAAGAGGAGGGCTTTGGAACTACGACAAATCGTTAATGGTTATAGAAGAGGCACAAGGAGCTAGCAGAATATCTCGGATAGAATTCAGGTATGTTAGTTTTTGGGTCCATATCCACGACTTACCAACGGTTTGTATGCGCAGGAAATGGGCGGTGGAGCTCGACAACTCTTTGGGCGACTTTGAAGAAGTCAACTTAGACGAAGAGAGGGGAAGTGGGGAAAACACACTAAGGCTTCAAGTCAAAATTGATATCACTCAATCGTTAAAGAGAGGCTTGATGGTCAGAATCAGATCAAAAGCAGAGGAAACTTGGCTGAAAGTGACGTACGAACGTCTCCCCGAATTATGTTATGGTTGTGGGATGGTGGGTCATGTACAACAAGAATGCGAAGAAATGCCACAGAACACAGAAGTAGAAAACTTGTATTGGCGAATGGATGAGAGAAACACCAATCATATGAGGCCGGATAAAGCACAAACAACAAGACAACAAAAACAAAACCATATGGGGAAGAGGTAG

Coding sequence (CDS)

ATGATGGAAGAATTGGAAAAACTAAAAATTACTTCTGTAGAAAGAGCCAAAGTGGTGGGCATAGAAGATGAGGATCTAAACGAAGCTAACGAGGATCTCCAAGGAGGGATCTTATGGAGAATCCTAACCACTGAACTCATAAATCCTGGAGTTTTCAAAACCTTTATGGCAAAAATTTGGAACAAAGAAGGACGGGTGAGAATAAAAGCAAAGGGAAGGAACACCTTCTTCTGCCAGTTCAACAACCACCACGAAAAAGAAAGAATCAAAAGAGGAGGGCTTTGGAACTACGACAAATCGTTAATGGTTATAGAAGAGGCACAAGGAGCTAGCAGAATATCTCGGATAGAATTCAGGTATGTTAGTTTTTGGGTCCATATCCACGACTTACCAACGGTTTGTATGCGCAGGAAATGGGCGGTGGAGCTCGACAACTCTTTGGGCGACTTTGAAGAAGTCAACTTAGACGAAGAGAGGGGAAGTGGGGAAAACACACTAAGGCTTCAAGTCAAAATTGATATCACTCAATCGTTAAAGAGAGGCTTGATGGTCAGAATCAGATCAAAAGCAGAGGAAACTTGGCTGAAAGTGACGTACGAACGTCTCCCCGAATTATGTTATGGTTGTGGGATGGTGGGTCATGTACAACAAGAATGCGAAGAAATGCCACAGAACACAGAAGTAGAAAACTTGTATTGGCGAATGGATGAGAGAAACACCAATCATATGAGGCCGGATAAAGCACAAACAACAAGACAACAAAAACAAAACCATATGGGGAAGAGGTAG

Protein sequence

MMEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQECEEMPQNTEVENLYWRMDERNTNHMRPDKAQTTRQQKQNHMGKR
Homology
BLAST of Lag0008602 vs. NCBI nr
Match: TXG72599.1 (hypothetical protein EZV62_001178 [Acer yangbiense])

HSP 1 Score: 152.1 bits (383), Expect = 6.5e-33
Identity = 78/226 (34.51%), Postives = 132/226 (58.41%), Query Frame = 0

Query: 2   MEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWN 61
           +E+L K    + E   V+ + +E + +  ED+   ++ ++LT + IN   FK  + +IW+
Sbjct: 6   IEKLYKSMSLADEDGAVLEMTEEVVVDGKEDIDQCLVGKVLTGKKINREAFKGLIEQIWS 65

Query: 62  KEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYV 121
             G+V ++  G N F   F N  +++R+ R G W++  SL+ +E+  G   ++ IEF   
Sbjct: 66  PYGQVEVELVGDNVFMFYFINRADRDRVWRRGPWHFGNSLISLEKTSGLGNVANIEFNRA 125

Query: 122 SFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRG 181
            FW+ IHD+P +CM R+ A  L   +G+  E+ L E R    N LR++V+IDI++ LKR 
Sbjct: 126 DFWIQIHDIPILCMNRRTARWLAEQIGEVVEI-LSESRECWGNFLRVKVRIDISKPLKRW 185

Query: 182 LMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQEC-EEMPQNT 227
           L +++ +  E   + + YERLPE CY CG +GH  +EC +E+ + T
Sbjct: 186 LRLKLGASKEIIVVGLKYERLPEFCYACGRIGHGIKECGDEVARKT 230

BLAST of Lag0008602 vs. NCBI nr
Match: XP_022156185.1 (uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncharacterized protein LOC111023135 [Momordica charantia])

HSP 1 Score: 148.7 bits (374), Expect = 7.2e-32
Identity = 66/220 (30.00%), Postives = 128/220 (58.18%), Query Frame = 0

Query: 1   MMEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIW 60
           ++ + +K K+TS E    + ++ + +  A + L   ++ ++L   +I+  V    +   W
Sbjct: 6   LLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAW 65

Query: 61  NKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRY 120
             E ++ +++ G+N F   F    +  R+ + G W +DK+L+V+++   +  IS +EF  
Sbjct: 66  KVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNR 125

Query: 121 VSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKR 180
           V+FW+H+ DLP   + +  A+ L N++G+F +V+ +E+  S   +LR++V IDIT+ L+R
Sbjct: 126 VAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRR 185

Query: 181 GLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQECE 221
           G+ + I       W+ + YERLP+ CY CG++GH   +C+
Sbjct: 186 GIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCD 225

BLAST of Lag0008602 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 147.5 bits (371), Expect = 1.6e-31
Identity = 70/222 (31.53%), Postives = 124/222 (55.86%), Query Frame = 0

Query: 6   EKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGR 65
           EKL +   +   +  I+        + L   ++ + +T ++IN   FK+ ++ IW  +  
Sbjct: 11  EKLSLDD-DNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTISTIWQTKNE 70

Query: 66  VRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYVSFWV 125
           V ++  G N F  +F N+ +++RI  GG W +DK L+V+ EA G+ +++ ++FRYV FW+
Sbjct: 71  VTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWI 130

Query: 126 HIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVR 185
            +H+LP  C+ R+  + L   +G  +E++  E        +R++V ID+   LKRGL V 
Sbjct: 131 QLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPLKRGLRVA 190

Query: 186 IRSKAEETWLKVTYERLPELCYGCGMVGHVQQECEEMPQNTE 228
           +    +   + + YERLP  CY CG +GH+ ++C   P NT+
Sbjct: 191 LGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDC---PLNTK 228

BLAST of Lag0008602 vs. NCBI nr
Match: TXG48193.1 (hypothetical protein EZV62_027487 [Acer yangbiense])

HSP 1 Score: 147.1 bits (370), Expect = 2.1e-31
Identity = 69/206 (33.50%), Postives = 121/206 (58.74%), Query Frame = 0

Query: 14  ERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGR 73
           E A V  I ++ + + +ED+   ++ ++LT + +N   FK  + +IWN+ G+V ++  G 
Sbjct: 18  EDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIEQIWNQFGQVEVELVGE 77

Query: 74  NTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYVSFWVHIHDLPTV 133
           NTF   F N   + ++   G W + KSL+V+E+ +G   I++++F    FWV IHD+P +
Sbjct: 78  NTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLKFNQADFWVQIHDIPIM 137

Query: 134 CMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEET 193
           CM ++    L   +G+  E+   E R      +R++V++DIT+ LKR L +++    E T
Sbjct: 138 CMNQRTTKWLAEYIGEVVEIP-TESRECWGKYVRVKVQVDITKPLKRWLRIKLGKYEEIT 197

Query: 194 WLKVTYERLPELCYGCGMVGHVQQEC 220
            + + YERLP+ C+ CG +GH  +EC
Sbjct: 198 MVALKYERLPDFCFACGRIGHSVREC 222

BLAST of Lag0008602 vs. NCBI nr
Match: TXG48504.1 (hypothetical protein EZV62_024379 [Acer yangbiense])

HSP 1 Score: 146.7 bits (369), Expect = 2.7e-31
Identity = 74/203 (36.45%), Postives = 117/203 (57.64%), Query Frame = 0

Query: 20  GIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQ 79
           GIE+E + + +  L G    ++L++  +N   FKT + +IW+  G V I+A G+NTF   
Sbjct: 28  GIENEGVKDVHHCLVG----KVLSSRRVNREAFKTIIEQIWSPFGTVDIEAVGKNTFLFY 87

Query: 80  FNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKW 139
           F N  ++ RI R G W++D+ L+ +E+ +G   IS++ F    FWV IHD+P +CM R  
Sbjct: 88  FANPEDRNRIWRRGPWHFDRHLLALEKLEGTGNISQLSFSKAEFWVQIHDIPIMCMNRCM 147

Query: 140 AVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTY 199
           A  L   +GD  E+   + R      LR++V IDI++ LKR L +++        + + Y
Sbjct: 148 AKWLAAQIGDIIEIP-SKSRECWGKFLRVKVLIDISRPLKRWLRLKLDQSDNIVMVNLKY 207

Query: 200 ERLPELCYGCGMVGHVQQECEEM 223
           ERLPE CY CG +GH   +C ++
Sbjct: 208 ERLPEFCYACGRLGHSIGDCNDV 225

BLAST of Lag0008602 vs. ExPASy TrEMBL
Match: A0A5C7IU01 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_001178 PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 3.1e-33
Identity = 78/226 (34.51%), Postives = 132/226 (58.41%), Query Frame = 0

Query: 2   MEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWN 61
           +E+L K    + E   V+ + +E + +  ED+   ++ ++LT + IN   FK  + +IW+
Sbjct: 6   IEKLYKSMSLADEDGAVLEMTEEVVVDGKEDIDQCLVGKVLTGKKINREAFKGLIEQIWS 65

Query: 62  KEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYV 121
             G+V ++  G N F   F N  +++R+ R G W++  SL+ +E+  G   ++ IEF   
Sbjct: 66  PYGQVEVELVGDNVFMFYFINRADRDRVWRRGPWHFGNSLISLEKTSGLGNVANIEFNRA 125

Query: 122 SFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRG 181
            FW+ IHD+P +CM R+ A  L   +G+  E+ L E R    N LR++V+IDI++ LKR 
Sbjct: 126 DFWIQIHDIPILCMNRRTARWLAEQIGEVVEI-LSESRECWGNFLRVKVRIDISKPLKRW 185

Query: 182 LMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQEC-EEMPQNT 227
           L +++ +  E   + + YERLPE CY CG +GH  +EC +E+ + T
Sbjct: 186 LRLKLGASKEIIVVGLKYERLPEFCYACGRIGHGIKECGDEVARKT 230

BLAST of Lag0008602 vs. ExPASy TrEMBL
Match: A0A6J1DU55 (uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023135 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 3.5e-32
Identity = 66/220 (30.00%), Postives = 128/220 (58.18%), Query Frame = 0

Query: 1   MMEELEKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIW 60
           ++ + +K K+TS E    + ++ + +  A + L   ++ ++L   +I+  V    +   W
Sbjct: 6   LLADWQKFKLTSEEDEIAMDVDVDAVKMAEQGLAYSLVGKLLAKRIISADVLSRVLLLAW 65

Query: 61  NKEGRVRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRY 120
             E ++ +++ G+N F   F    +  R+ + G W +DK+L+V+++   +  IS +EF  
Sbjct: 66  KVEHQLTVESIGKNLFLFHFCRECDMNRVMKTGPWFFDKALIVLQKPCSSKNISELEFNR 125

Query: 121 VSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKR 180
           V+FW+H+ DLP   + +  A+ L N++G+F +V+ +E+  S   +LR++V IDIT+ L+R
Sbjct: 126 VAFWIHLFDLPMSWLNKTMAIRLGNAIGNFVDVDCNEKGFSWGASLRIRVLIDITKPLRR 185

Query: 181 GLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQECE 221
           G+ + I       W+ + YERLP+ CY CG++GH   +C+
Sbjct: 186 GIKINIDGPMGGCWIPIQYERLPDFCYFCGVIGHSSHDCD 225

BLAST of Lag0008602 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 147.5 bits (371), Expect = 7.7e-32
Identity = 70/222 (31.53%), Postives = 124/222 (55.86%), Query Frame = 0

Query: 6   EKLKITSVERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGR 65
           EKL +   +   +  I+        + L   ++ + +T ++IN   FK+ ++ IW  +  
Sbjct: 11  EKLSLDD-DNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTISTIWQTKNE 70

Query: 66  VRIKAKGRNTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYVSFWV 125
           V ++  G N F  +F N+ +++RI  GG W +DK L+V+ EA G+ +++ ++FRYV FW+
Sbjct: 71  VTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDLQFRYVPFWI 130

Query: 126 HIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVR 185
            +H+LP  C+ R+  + L   +G  +E++  E        +R++V ID+   LKRGL V 
Sbjct: 131 QLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMNPLKRGLRVA 190

Query: 186 IRSKAEETWLKVTYERLPELCYGCGMVGHVQQECEEMPQNTE 228
           +    +   + + YERLP  CY CG +GH+ ++C   P NT+
Sbjct: 191 LGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDC---PLNTK 228

BLAST of Lag0008602 vs. ExPASy TrEMBL
Match: A0A5C7GU64 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_027487 PE=4 SV=1)

HSP 1 Score: 147.1 bits (370), Expect = 1.0e-31
Identity = 69/206 (33.50%), Postives = 121/206 (58.74%), Query Frame = 0

Query: 14  ERAKVVGIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGR 73
           E A V  I ++ + + +ED+   ++ ++LT + +N   FK  + +IWN+ G+V ++  G 
Sbjct: 18  EDAAVHEITEDYIQDGDEDVDRCLVGKVLTGKKVNREAFKGLIEQIWNQFGQVEVELVGE 77

Query: 74  NTFFCQFNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYVSFWVHIHDLPTV 133
           NTF   F N   + ++   G W + KSL+V+E+ +G   I++++F    FWV IHD+P +
Sbjct: 78  NTFMFHFTNKEYRNKVWNRGPWLFGKSLIVLEKPKGPGDITKLKFNQADFWVQIHDIPIM 137

Query: 134 CMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEET 193
           CM ++    L   +G+  E+   E R      +R++V++DIT+ LKR L +++    E T
Sbjct: 138 CMNQRTTKWLAEYIGEVVEIP-TESRECWGKYVRVKVQVDITKPLKRWLRIKLGKYEEIT 197

Query: 194 WLKVTYERLPELCYGCGMVGHVQQEC 220
            + + YERLP+ C+ CG +GH  +EC
Sbjct: 198 MVALKYERLPDFCFACGRIGHSVREC 222

BLAST of Lag0008602 vs. ExPASy TrEMBL
Match: A0A5C7GUN2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_024379 PE=4 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 1.3e-31
Identity = 74/203 (36.45%), Postives = 117/203 (57.64%), Query Frame = 0

Query: 20  GIEDEDLNEANEDLQGGILWRILTTELINPGVFKTFMAKIWNKEGRVRIKAKGRNTFFCQ 79
           GIE+E + + +  L G    ++L++  +N   FKT + +IW+  G V I+A G+NTF   
Sbjct: 28  GIENEGVKDVHHCLVG----KVLSSRRVNREAFKTIIEQIWSPFGTVDIEAVGKNTFLFY 87

Query: 80  FNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKW 139
           F N  ++ RI R G W++D+ L+ +E+ +G   IS++ F    FWV IHD+P +CM R  
Sbjct: 88  FANPEDRNRIWRRGPWHFDRHLLALEKLEGTGNISQLSFSKAEFWVQIHDIPIMCMNRCM 147

Query: 140 AVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTY 199
           A  L   +GD  E+   + R      LR++V IDI++ LKR L +++        + + Y
Sbjct: 148 AKWLAAQIGDIIEIP-SKSRECWGKFLRVKVLIDISRPLKRWLRLKLDQSDNIVMVNLKY 207

Query: 200 ERLPELCYGCGMVGHVQQECEEM 223
           ERLPE CY CG +GH   +C ++
Sbjct: 208 ERLPEFCYACGRLGHSIGDCNDV 225

BLAST of Lag0008602 vs. TAIR 10
Match: AT5G36228.1 (nucleic acid binding;zinc ion binding )

HSP 1 Score: 55.5 bits (132), Expect = 7.7e-08
Identity = 29/111 (26.13%), Postives = 55/111 (49.55%), Query Frame = 0

Query: 120 YVSFWVHIHDLPTVCMRRKWAVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLK 179
           ++  WVHI  +P   +  +    + ++LG+   ++ +EE  S    +R++V++D T+ L+
Sbjct: 120 FIDVWVHIRGIPLPYVSERTVEIIASTLGEVVAMDFNEETTSQITFIRVKVRMDFTEPLR 179

Query: 180 RGLMVRIRSKAEETWLKVTYERLPELCYGCGMVGHVQQECEEMPQNTEVEN 231
               VR  S+ E   +   YE+L  +C  C  V H    C  +    E++N
Sbjct: 180 FFRRVRFASR-ERAMIGFEYEKLQRVCTNCCRVNHQVSHCPYVVHQEEMDN 229

BLAST of Lag0008602 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 43.1 bits (100), Expect = 3.9e-04
Identity = 31/140 (22.14%), Postives = 50/140 (35.71%), Query Frame = 0

Query: 80  FNNHHEKERIKRGGLWNYDKSLMVIEEAQGASRISRIEFRYVSFWVHIHDLPTVCMRRKW 139
           F +      I R G W+++  + VI+  +     S  EF+ + FW+ I  +P   +  + 
Sbjct: 66  FQSEESMFSILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWIQIRGIPLRFLTARI 125

Query: 140 AVELDNSLGDFEEVNLDEERGSGENTLRLQVKIDITQSLKRGLMVRIRSKAEETWLKVTY 199
              +   +G F E NL                                   + + LK  Y
Sbjct: 126 ITSIGERMGLFLETNLGR---------------------------------DVSVLKFQY 170

Query: 200 ERLPELCYGCGMVGHVQQEC 220
           E+L   C  CGM+ H   EC
Sbjct: 186 EKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TXG72599.16.5e-3334.51hypothetical protein EZV62_001178 [Acer yangbiense][more]
XP_022156185.17.2e-3230.00uncharacterized protein LOC111023135 [Momordica charantia] >XP_022156186.1 uncha... [more]
TXG54013.11.6e-3131.53hypothetical protein EZV62_019269 [Acer yangbiense][more]
TXG48193.12.1e-3133.50hypothetical protein EZV62_027487 [Acer yangbiense][more]
TXG48504.12.7e-3136.45hypothetical protein EZV62_024379 [Acer yangbiense][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7IU013.1e-3334.51CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_00117... [more]
A0A6J1DU553.5e-3230.00uncharacterized protein LOC111023135 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A5C7H9Y27.7e-3231.53CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926... [more]
A0A5C7GU641.0e-3133.50CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02748... [more]
A0A5C7GUN21.3e-3136.45CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_02437... [more]
Match NameE-valueIdentityDescription
AT5G36228.17.7e-0826.13nucleic acid binding;zinc ion binding [more]
AT3G42140.13.9e-0422.14zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 172..220
e-value: 2.0E-14
score: 53.0
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 27..170
e-value: 1.2E-20
score: 73.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 238..262
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 34..258
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 34..258
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 206..221
score: 9.438442

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008602.1Lag0008602.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding