Lag0008566 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008566
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionCCHC-type domain-containing protein
Locationchr9: 25516933 .. 25518510 (+)
RNA-Seq ExpressionLag0008566
SyntenyLag0008566
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAAACCCAGGTTGAAACACCAGGGAAGACACAAACCCACGAGAAAGAGCAGCCGAGCAAACAACCTGAAGAAACCTCGATAAGTAAGCAATTGGAAAAACTGAACATTACAGCTGAAGAAAGGGGAAACATAGTTAGGATGAAAGATGAAGATCTGAAGAAGAAAGTTCAAGACATGGAAAATATATTGGTCTGTAAGATATTAACGGAGAAAAGCATTAACCCGGAGATTTTTAAGTCCATGATCCCACGGATTTGGGGAATGGAAGGCAAAGTAACCATCAAAAAAGCAGGTGAAAACATGTTTGAATGCAATTTTGACTCAAAATATAGAAAAAGAAGGATTATGGAAGCAAGCCCATGGATTTACGACAATGCGCTTCTGGCCTTTGAGGAAATTAAAGGAACAGAGAGGTATTCAAGAATCCAATTCAGACACGTCCCTTTTTGGGTTCACTTCCTAGATCTACCAAGAATCTGTTTTAATAGGAAGTGGGCAGAGGATCTGGGAAATGCAGTAGGAGTTTTTGAAAGAGTGGATTTCGACAAAGACGAATATGAAGTAGGGGAATCCATGAGAGTTAGAGTCAAAATCGACGTCCAGAAACCTTTACGAAGAGGAACTGTGATCACTCTGGGGACCAACGCCGAAGAGGAATGGATCGACATGAGGTACGAGAAGCTACCAGAATTCTGTTATGGATGTGGTAGAATAGGCCATCTGGCGAGGGAATGCACCGATCTAGAAGCTATGAATAAAGAAGAGCTGGATTATGGCCCTTGGCTGAGGAAAGAAGGCACAGCAAGGGGGAAACCTCGACAGAAAAGAGGAGGAGGAGGGGGAAAACACCAACGAGAAGACAAAGATCAGAAACAGAGATGGATAGAAAAAAAGAACGGCAACAAAGCAGAAGAAAAGGAGAATCAGGAAGCACACCGGCCGGAAAAACCACCGGAAAAGATGGAAGTTCAAAGTCCGGTGGAACCAAGGAACACGACAAATCAAACGGTTAGTTCAAAATCCCAACGTACAGAAGACGCAATGATGGTGGACCAAACCCCGAGGAACACAGAAAATCAGATGGTGGAAAAGGAAAAAAGGAAAGTATGTGAAAGAGGCCACCAGACCAACAAACATGTGGGCCAAGAAGGTGACAACGAAACCCAAATAAAGGGGCCCAGGTGTGAAGGCCAATTAGCAGACCTGGGCCAAACAAGTCAATCTGGCCAACTAAAAGGAAAATTATACCCAGACATGGAAAAGAACTTAAGTACATCCACTCAGAAAATAGAGTTACCACGCAAAACCAAAGCAGAAGATATACTTCAAACTGGAGAAGAGCAACAACTAAACACCGACCCTAAAAGGACTAGAAAGTCATGGAAAAGAAGAGCTCGAGAAGGCCTCAAGGGATACGAGAACAGTGGATATACTAGTAAGGTGGGAGAAAACAGAAAACATGAAAGGGAAAGTCAAGAAGAAGCCAGAGAAGGGAAGAAAGCGTGCAAGGAATACTTCGGGTCAACCGTTGGGATATCGGCGGAGGCTGAATTTCAGCCCCGCCGGATGCCATGA

mRNA sequence

ATGGAAACCCAGGTTGAAACACCAGGGAAGACACAAACCCACGAGAAAGAGCAGCCGAGCAAACAACCTGAAGAAACCTCGATAAGTAAGCAATTGGAAAAACTGAACATTACAGCTGAAGAAAGGGGAAACATAGTTAGGATGAAAGATGAAGATCTGAAGAAGAAAGTTCAAGACATGGAAAATATATTGGTCTGTAAGATATTAACGGAGAAAAGCATTAACCCGGAGATTTTTAAGTCCATGATCCCACGGATTTGGGGAATGGAAGGCAAAGTAACCATCAAAAAAGCAGGTGAAAACATGTTTGAATGCAATTTTGACTCAAAATATAGAAAAAGAAGGATTATGGAAGCAAGCCCATGGATTTACGACAATGCGCTTCTGGCCTTTGAGGAAATTAAAGGAACAGAGAGGTATTCAAGAATCCAATTCAGACACGTCCCTTTTTGGGTTCACTTCCTAGATCTACCAAGAATCTGTTTTAATAGGAAGTGGGCAGAGGATCTGGGAAATGCAGTAGGAGTTTTTGAAAGAGTGGATTTCGACAAAGACGAATATGAAGTAGGGGAATCCATGAGAGTTAGAGTCAAAATCGACGTCCAGAAACCTTTACGAAGAGGAACTGTGATCACTCTGGGGACCAACGCCGAAGAGGAATGGATCGACATGAGGTACGAGAAGCTACCAGAATTCTGTTATGGATGTGGTAGAATAGGCCATCTGGCGAGGGAATGCACCGATCTAGAAGCTATGAATAAAGAAGAGCTGGATTATGGCCCTTGGCTGAGGAAAGAAGGCACAGCAAGGGGGAAACCTCGACAGAAAAGAGGAGGAGGAGGGGGAAAACACCAACGAGAAGACAAAGATCAGAAACAGAGATGGATAGAAAAAAAGAACGGCAACAAAGCAGAAGAAAAGGAGAATCAGGAAGCACACCGGCCGGAAAAACCACCGGAAAAGATGGAAGTTCAAAGTCCGGTGGAACCAAGGAACACGACAAATCAAACGGTTAGTTCAAAATCCCAACGTACAGAAGACGCAATGATGGTGGACCAAACCCCGAGGAACACAGAAAATCAGATGGTGGAAAAGGAAAAAAGGAAAGTATGTGAAAGAGGCCACCAGACCAACAAACATGTGGGCCAAGAAGGTGACAACGAAACCCAAATAAAGGGGCCCAGGTGTGAAGGCCAATTAGCAGACCTGGGCCAAACAAGTCAATCTGGCCAACTAAAAGGAAAATTATACCCAGACATGGAAAAGAACTTAAGTACATCCACTCAGAAAATAGAGTTACCACGCAAAACCAAAGCAGAAGATATACTTCAAACTGGAGAAGAGCAACAACTAAACACCGACCCTAAAAGGACTAGAAAGTCATGGAAAAGAAGAGCTCGAGAAGGCCTCAAGGGATACGAGAACAGTGGATATACTAGTAAGGTGGGAGAAAACAGAAAACATGAAAGGGAAAGTCAAGAAGAAGCCAGAGAAGGGAAGAAAGCGTGCAAGGAATACTTCGGGTCAACCGTTGGGATATCGGCGGAGGCTGAATTTCAGCCCCGCCGGATGCCATGA

Coding sequence (CDS)

ATGGAAACCCAGGTTGAAACACCAGGGAAGACACAAACCCACGAGAAAGAGCAGCCGAGCAAACAACCTGAAGAAACCTCGATAAGTAAGCAATTGGAAAAACTGAACATTACAGCTGAAGAAAGGGGAAACATAGTTAGGATGAAAGATGAAGATCTGAAGAAGAAAGTTCAAGACATGGAAAATATATTGGTCTGTAAGATATTAACGGAGAAAAGCATTAACCCGGAGATTTTTAAGTCCATGATCCCACGGATTTGGGGAATGGAAGGCAAAGTAACCATCAAAAAAGCAGGTGAAAACATGTTTGAATGCAATTTTGACTCAAAATATAGAAAAAGAAGGATTATGGAAGCAAGCCCATGGATTTACGACAATGCGCTTCTGGCCTTTGAGGAAATTAAAGGAACAGAGAGGTATTCAAGAATCCAATTCAGACACGTCCCTTTTTGGGTTCACTTCCTAGATCTACCAAGAATCTGTTTTAATAGGAAGTGGGCAGAGGATCTGGGAAATGCAGTAGGAGTTTTTGAAAGAGTGGATTTCGACAAAGACGAATATGAAGTAGGGGAATCCATGAGAGTTAGAGTCAAAATCGACGTCCAGAAACCTTTACGAAGAGGAACTGTGATCACTCTGGGGACCAACGCCGAAGAGGAATGGATCGACATGAGGTACGAGAAGCTACCAGAATTCTGTTATGGATGTGGTAGAATAGGCCATCTGGCGAGGGAATGCACCGATCTAGAAGCTATGAATAAAGAAGAGCTGGATTATGGCCCTTGGCTGAGGAAAGAAGGCACAGCAAGGGGGAAACCTCGACAGAAAAGAGGAGGAGGAGGGGGAAAACACCAACGAGAAGACAAAGATCAGAAACAGAGATGGATAGAAAAAAAGAACGGCAACAAAGCAGAAGAAAAGGAGAATCAGGAAGCACACCGGCCGGAAAAACCACCGGAAAAGATGGAAGTTCAAAGTCCGGTGGAACCAAGGAACACGACAAATCAAACGGTTAGTTCAAAATCCCAACGTACAGAAGACGCAATGATGGTGGACCAAACCCCGAGGAACACAGAAAATCAGATGGTGGAAAAGGAAAAAAGGAAAGTATGTGAAAGAGGCCACCAGACCAACAAACATGTGGGCCAAGAAGGTGACAACGAAACCCAAATAAAGGGGCCCAGGTGTGAAGGCCAATTAGCAGACCTGGGCCAAACAAGTCAATCTGGCCAACTAAAAGGAAAATTATACCCAGACATGGAAAAGAACTTAAGTACATCCACTCAGAAAATAGAGTTACCACGCAAAACCAAAGCAGAAGATATACTTCAAACTGGAGAAGAGCAACAACTAAACACCGACCCTAAAAGGACTAGAAAGTCATGGAAAAGAAGAGCTCGAGAAGGCCTCAAGGGATACGAGAACAGTGGATATACTAGTAAGGTGGGAGAAAACAGAAAACATGAAAGGGAAAGTCAAGAAGAAGCCAGAGAAGGGAAGAAAGCGTGCAAGGAATACTTCGGGTCAACCGTTGGGATATCGGCGGAGGCTGAATTTCAGCCCCGCCGGATGCCATGA

Protein sequence

METQVETPGKTQTHEKEQPSKQPEETSISKQLEKLNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSMIPRIWGMEGKVTIKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRIQFRHVPFWVHFLDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQKPLRRGTVITLGTNAEEEWIDMRYEKLPEFCYGCGRIGHLARECTDLEAMNKEELDYGPWLRKEGTARGKPRQKRGGGGGKHQREDKDQKQRWIEKKNGNKAEEKENQEAHRPEKPPEKMEVQSPVEPRNTTNQTVSSKSQRTEDAMMVDQTPRNTENQMVEKEKRKVCERGHQTNKHVGQEGDNETQIKGPRCEGQLADLGQTSQSGQLKGKLYPDMEKNLSTSTQKIELPRKTKAEDILQTGEEQQLNTDPKRTRKSWKRRAREGLKGYENSGYTSKVGENRKHERESQEEAREGKKACKEYFGSTVGISAEAEFQPRRMP
Homology
BLAST of Lag0008566 vs. NCBI nr
Match: TXG57113.1 (hypothetical protein EZV62_018426 [Acer yangbiense])

HSP 1 Score: 171.4 bits (433), Expect = 2.1e-38
Identity = 95/266 (35.71%), Postives = 142/266 (53.38%), Query Frame = 0

Query: 25  ETSISKQLEKLNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSMIP 84
           E  I+K  E L I  E+R  I+ M +E     V+D++  LV K+L+ K +N E FK +I 
Sbjct: 3   EMEITKLYESLFIAEEDRA-ILEMSEETSVDGVEDVDRCLVVKVLSGKKVNREAFKGLIE 62

Query: 85  RIWGMEGKVTIKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRIQ 144
           +IW   G+V ++  G+N F   F +   + R+    PW + N+L+  E+  G    S++ 
Sbjct: 63  QIWNPNGQVEVELVGDNRFMFYFINNEDRNRVWNRGPWHFGNSLIVLEKPVGPGNISKLS 122

Query: 145 FRHVPFWVHFLDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQKP 204
           F    FWV   D+P +C NR+ A+ L   +G    +  +  E   G+ MRV+V+ID+ KP
Sbjct: 123 FNKADFWVQIHDIPILCMNRRTAKWLAEQIGEVVEIPLESREC-WGKFMRVKVRIDILKP 182

Query: 205 LRRGTVITLGTNAEEEWIDMRYEKLPEFCYGCGRIGHLARECTDLE----AMNKEELDYG 264
           L+R   + LG   E   + ++YE+LPEFCY CG+IGH  +EC D E    A+      +G
Sbjct: 183 LKRWLRLKLGKCDEITTVGLKYERLPEFCYACGKIGHGIKECFDEEARQYALEGSPTRFG 242

Query: 265 PWLRKEGTARGKPRQKRGGGGGKHQR 287
            WL+   T R KPR    G G    R
Sbjct: 243 SWLKAPVTERVKPRFGSIGNGSSSDR 266

BLAST of Lag0008566 vs. NCBI nr
Match: XP_028122006.1 (uncharacterized protein LOC114319195 [Camellia sinensis])

HSP 1 Score: 168.3 bits (425), Expect = 1.7e-37
Identity = 94/258 (36.43%), Postives = 141/258 (54.65%), Query Frame = 0

Query: 35  LNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSMIPRIWGMEGKVT 94
           L++T+EE   +VR+  E     +   +  LV K+LT +  N E  K+ +  +W     + 
Sbjct: 12  LSLTSEEDA-VVRIGGESTSLMMGKSDMCLVGKLLTRRPFNVEAMKNTLLSVWQPTKGMQ 71

Query: 95  IKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRIQFRHVPFWVHF 154
           ++  G+N+F   F     KRR++   PW +D  LL   E+    + S IQ   V FWVH 
Sbjct: 72  VRVIGDNLFVFVFGHVVDKRRVLSDGPWTFDKHLLMLGEMDPNVQPSDIQLTRVQFWVHV 131

Query: 155 LDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQKPLRRGTVITLG 214
            +LP +  N+K  E +GNAVG F  +D++      G +MR+RV +DV+KPLRRG  + L 
Sbjct: 132 CNLPLVLMNKKVGEIVGNAVGQFIDMDYEDGGIVWGRTMRIRVALDVRKPLRRGMKLAL- 191

Query: 215 TNAEEEWIDMRYEKLPEFCYGCGRIGHLARECTD----LEAMNKEELDYGPWLRKEGTAR 274
           ++AE  W+D +YE+LP +CY CGR+GH  REC D     +    + L YG WLR +   +
Sbjct: 192 SSAEPIWVDFKYERLPIYCYFCGRLGHSERECDDKLSSADGSRVDSLQYGAWLRMD-NIK 251

Query: 275 GKPRQKRG----GGGGKH 285
            K  ++ G    G GG H
Sbjct: 252 SKGSRRAGSIDKGVGGTH 266

BLAST of Lag0008566 vs. NCBI nr
Match: TXG54013.1 (hypothetical protein EZV62_019269 [Acer yangbiense])

HSP 1 Score: 166.0 bits (419), Expect = 8.7e-37
Identity = 138/463 (29.81%), Postives = 219/463 (47.30%), Query Frame = 0

Query: 24  EETSISKQLEKLNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSMI 83
           E   IS++ EKL++  ++ G I R+K    ++  Q +   L+ K +T K IN E FKS I
Sbjct: 2   ESDDISRKCEKLSLD-DDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTI 61

Query: 84  PRIWGMEGKVTIKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRI 143
             IW  + +VT++  G N+F+  F + + ++RI+E  PW++D  LL   E  G+E+ + +
Sbjct: 62  STIWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDL 121

Query: 144 QFRHVPFWVHFLDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQK 203
           QFR+VPFW+   +LP  C NR+    LG  VG  + +D  +    VG+ +R+RV IDV  
Sbjct: 122 QFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMN 181

Query: 204 PLRRGTVITLGTNAEEEWIDMRYEKLPEFCYGCGRIGHLAREC--TDLEAMNKEELDYGP 263
           PL+RG  + LG + +   + + YE+LP FCY CG+IGHL R+C     E  +     +GP
Sbjct: 182 PLKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGP 241

Query: 264 WLRKEGTARGK--------PRQKRGGGG-----------------GKHQR---EDKDQKQ 323
           W+R     R K        P   R GG                  GK       D +Q  
Sbjct: 242 WMRAVSRTRSKGTGEKKNSPEGSREGGSSDTLENLRVKGSTKWNMGKDSSVLLRDGEQLD 301

Query: 324 RWIEKKNGNKAEEK---------ENQE------AHRPEKPPE-------KME----VQSP 383
              E K+GN  E K           QE      +H  EK  E       +ME    V +P
Sbjct: 302 LMTELKSGNTIETKTAVSRTMVVSKQELLQLARSHSKEKITEDSTQNSKRMETTVTVTNP 361

Query: 384 VEPRNTTNQTVSSKSQRTEDAMMVDQTPRNTENQMVEKEKRKVCERGHQTNKHVG-QEGD 430
           V   N +NQ  +  S+        D   + T  +  ++  R+ C   ++ N+ +G ++GD
Sbjct: 362 VIGENVSNQEGTMGSE--------DNGGKITNQKRWKRLAREKCGSVNEGNQSLGKKDGD 421

BLAST of Lag0008566 vs. NCBI nr
Match: XP_022132681.1 (uncharacterized protein LOC111005481 [Momordica charantia])

HSP 1 Score: 164.9 bits (416), Expect = 1.9e-36
Identity = 83/245 (33.88%), Postives = 143/245 (58.37%), Query Frame = 0

Query: 26  TSISKQLEKLNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSMIPR 85
           +++ ++ +   +T+EE    V +    L+   + +E  L+CK+L+++SI+  + K+ +  
Sbjct: 4   SNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKI 63

Query: 86  IWGMEGKV-TIKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRIQ 145
            W ++ K  ++   G N+F  NF+    + RI+   PW +D AL+  +      +   + 
Sbjct: 64  AWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMD 123

Query: 146 FRHVPFWVHFLDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQKP 205
           FR+V  WVHF DL   C N+  A  LGNA+G+FE V+ + + +  G  +RVRV+ DV KP
Sbjct: 124 FRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKP 183

Query: 206 LRRGTVITLGTNAEEEWIDMRYEKLPEFCYGCGRIGHLARECTD--LEAMNKEELDYGPW 265
           L RG  + L       WI ++YE+LP+F Y CGR+ H+ ++C+D  +++++K  L YGPW
Sbjct: 184 LHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSK-NLQYGPW 243

Query: 266 LRKEG 268
           LR +G
Sbjct: 244 LRFQG 247

BLAST of Lag0008566 vs. NCBI nr
Match: XP_028071384.1 (uncharacterized protein LOC114273772 [Camellia sinensis])

HSP 1 Score: 163.7 bits (413), Expect = 4.3e-36
Identity = 92/257 (35.80%), Postives = 137/257 (53.31%), Query Frame = 0

Query: 35  LNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSMIPRIWGMEGKVT 94
           L++T+EE   +VR+  +     +   +  LV K+LT +  N E  KS +  +W     + 
Sbjct: 12  LSLTSEEDA-VVRIGGDSTSLMMGKSDMCLVSKLLTRRPFNVEAMKSTLLSVWQPTKGMQ 71

Query: 95  IKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRIQFRHVPFWVHF 154
           ++  G+N+F   F     KRRI+   PW +D  LL   E+    + S IQ   V FWVH 
Sbjct: 72  VRVIGDNLFVFVFGHVVDKRRILSNGPWTFDKHLLMLGEMDPNVQPSDIQLTWVQFWVHV 131

Query: 155 LDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQKPLRRGTVITLG 214
            +LP I  N+K  + +GNAVG F  +D++      G +M +RV +DV+KPLRRG  + L 
Sbjct: 132 CNLPLILMNKKVGQIVGNAVGQFIDMDYEDGGIAWGRTMLIRVALDVRKPLRRGMKLAL- 191

Query: 215 TNAEEEWIDMRYEKLPEFCYGCGRIGHLAREC----TDLEAMNKEELDYGPWLRKEGTAR 274
           ++ E  W+D +YE+LP +CY CGR+GH  REC    +  +    + L YG WLR +    
Sbjct: 192 SSVEPIWVDFKYERLPIYCYFCGRLGHSDRECDAKLSSADGTRVDSLQYGAWLRMDNIKS 251

Query: 275 GKPRQKRG---GGGGKH 285
             PR+      G GG H
Sbjct: 252 KGPRRAGSIDKGVGGTH 266

BLAST of Lag0008566 vs. ExPASy TrEMBL
Match: A0A5C7HJ97 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_018426 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 1.0e-38
Identity = 95/266 (35.71%), Postives = 142/266 (53.38%), Query Frame = 0

Query: 25  ETSISKQLEKLNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSMIP 84
           E  I+K  E L I  E+R  I+ M +E     V+D++  LV K+L+ K +N E FK +I 
Sbjct: 3   EMEITKLYESLFIAEEDRA-ILEMSEETSVDGVEDVDRCLVVKVLSGKKVNREAFKGLIE 62

Query: 85  RIWGMEGKVTIKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRIQ 144
           +IW   G+V ++  G+N F   F +   + R+    PW + N+L+  E+  G    S++ 
Sbjct: 63  QIWNPNGQVEVELVGDNRFMFYFINNEDRNRVWNRGPWHFGNSLIVLEKPVGPGNISKLS 122

Query: 145 FRHVPFWVHFLDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQKP 204
           F    FWV   D+P +C NR+ A+ L   +G    +  +  E   G+ MRV+V+ID+ KP
Sbjct: 123 FNKADFWVQIHDIPILCMNRRTAKWLAEQIGEVVEIPLESREC-WGKFMRVKVRIDILKP 182

Query: 205 LRRGTVITLGTNAEEEWIDMRYEKLPEFCYGCGRIGHLARECTDLE----AMNKEELDYG 264
           L+R   + LG   E   + ++YE+LPEFCY CG+IGH  +EC D E    A+      +G
Sbjct: 183 LKRWLRLKLGKCDEITTVGLKYERLPEFCYACGKIGHGIKECFDEEARQYALEGSPTRFG 242

Query: 265 PWLRKEGTARGKPRQKRGGGGGKHQR 287
            WL+   T R KPR    G G    R
Sbjct: 243 SWLKAPVTERVKPRFGSIGNGSSSDR 266

BLAST of Lag0008566 vs. ExPASy TrEMBL
Match: A0A5C7H9Y2 (CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_019269 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 4.2e-37
Identity = 138/463 (29.81%), Postives = 219/463 (47.30%), Query Frame = 0

Query: 24  EETSISKQLEKLNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSMI 83
           E   IS++ EKL++  ++ G I R+K    ++  Q +   L+ K +T K IN E FKS I
Sbjct: 2   ESDDISRKCEKLSLD-DDNGPIERIKGSLQERGEQSLSLSLIGKAITNKVINREAFKSTI 61

Query: 84  PRIWGMEGKVTIKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRI 143
             IW  + +VT++  G N+F+  F + + ++RI+E  PW++D  LL   E  G+E+ + +
Sbjct: 62  STIWQTKNEVTMELMGINIFKFRFQNYWDRKRILEGGPWLFDKQLLVLREASGSEKVTDL 121

Query: 144 QFRHVPFWVHFLDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQK 203
           QFR+VPFW+   +LP  C NR+    LG  VG  + +D  +    VG+ +R+RV IDV  
Sbjct: 122 QFRYVPFWIQLHNLPLACLNREIGLHLGGLVGQVKEIDAGESGECVGQFIRIRVLIDVMN 181

Query: 204 PLRRGTVITLGTNAEEEWIDMRYEKLPEFCYGCGRIGHLAREC--TDLEAMNKEELDYGP 263
           PL+RG  + LG + +   + + YE+LP FCY CG+IGHL R+C     E  +     +GP
Sbjct: 182 PLKRGLRVALGDDEKVNEVMICYERLPNFCYYCGKIGHLVRDCPLNTKEITSSSSFKFGP 241

Query: 264 WLRKEGTARGK--------PRQKRGGGG-----------------GKHQR---EDKDQKQ 323
           W+R     R K        P   R GG                  GK       D +Q  
Sbjct: 242 WMRAVSRTRSKGTGEKKNSPEGSREGGSSDTLENLRVKGSTKWNMGKDSSVLLRDGEQLD 301

Query: 324 RWIEKKNGNKAEEK---------ENQE------AHRPEKPPE-------KME----VQSP 383
              E K+GN  E K           QE      +H  EK  E       +ME    V +P
Sbjct: 302 LMTELKSGNTIETKTAVSRTMVVSKQELLQLARSHSKEKITEDSTQNSKRMETTVTVTNP 361

Query: 384 VEPRNTTNQTVSSKSQRTEDAMMVDQTPRNTENQMVEKEKRKVCERGHQTNKHVG-QEGD 430
           V   N +NQ  +  S+        D   + T  +  ++  R+ C   ++ N+ +G ++GD
Sbjct: 362 VIGENVSNQEGTMGSE--------DNGGKITNQKRWKRLAREKCGSVNEGNQSLGKKDGD 421

BLAST of Lag0008566 vs. ExPASy TrEMBL
Match: A0A6J1BSZ1 (uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005481 PE=4 SV=1)

HSP 1 Score: 164.9 bits (416), Expect = 9.4e-37
Identity = 83/245 (33.88%), Postives = 143/245 (58.37%), Query Frame = 0

Query: 26  TSISKQLEKLNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSMIPR 85
           +++ ++ +   +T+EE    V +    L+   + +E  L+CK+L+++SI+  + K+ +  
Sbjct: 4   SNLLEEWKNFKLTSEEDKIAVDIDSSALEGTGKCLELSLICKLLSKRSISCTVLKNTLKI 63

Query: 86  IWGMEGKV-TIKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRIQ 145
            W ++ K  ++   G N+F  NF+    + RI+   PW +D AL+  +      +   + 
Sbjct: 64  AWKLDCKAFSVDIIGFNIFLFNFNRSSDRNRILRMGPWTFDRALIIIDNPVSLTKPLDMD 123

Query: 146 FRHVPFWVHFLDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQKP 205
           FR+V  WVHF DL   C N+  A  LGNA+G+FE V+ + + +  G  +RVRV+ DV KP
Sbjct: 124 FRNVSLWVHFFDLSLACMNKTMATRLGNAIGLFEDVESNANNFCWGSCLRVRVRFDVMKP 183

Query: 206 LRRGTVITLGTNAEEEWIDMRYEKLPEFCYGCGRIGHLARECTD--LEAMNKEELDYGPW 265
           L RG  + L       WI ++YE+LP+F Y CGR+ H+ ++C+D  +++++K  L YGPW
Sbjct: 184 LHRGIKLNLDGPMGGCWIPIQYERLPDFRYHCGRLDHILKDCSDCCVDSVSK-NLQYGPW 243

Query: 266 LRKEG 268
           LR +G
Sbjct: 244 LRFQG 247

BLAST of Lag0008566 vs. ExPASy TrEMBL
Match: A0A1S8AC25 (CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 2.3e-35
Identity = 95/259 (36.68%), Postives = 142/259 (54.83%), Query Frame = 0

Query: 23  PEETSISKQLEKLNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSM 82
           PEE  + K+   + ++ EE G  V  K+       + +   LV K+L  + ++ E  K  
Sbjct: 3   PEE--LIKRCRAIRLSDEEGGR-VSFKNRMKINGEKILAGCLVGKVLHTREVSIEGLKMA 62

Query: 83  IPRIWGMEGKVTIKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSR 142
           + R+W    +V I+K GEN+F   F S+  KR IM   PW +D AL+   E  G     +
Sbjct: 63  MQRVWRTSREVKIEKLGENVFMFKFGSEVDKRSIMVGGPWHFDRALIGLTEPTGIGDIKK 122

Query: 143 IQFRHVPFWVHFLDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQ 202
             F HV FWV   D+P +C ++  A +LG  +G  E V+ D      G+ +R+R+ +D+ 
Sbjct: 123 QDFSHVSFWVQIHDVPIMCMSKDMAAELGKVIGKVEEVETDAAGECFGQFLRLRISVDIT 182

Query: 203 KPLRRGTVITLGTNAEE-EWIDMR--YEKLPEFCYGCGRIGHLARECTDLEAMNKEELDY 262
           KPL++  +I L    E+ + I MR  YE+LP+FC+ CGRIGH  REC   ++ +K+EL Y
Sbjct: 183 KPLKK--IIELEQEEEDADDIPMRVMYERLPDFCFCCGRIGHQYRECFYYKSQSKDELAY 242

Query: 263 GPWLRKEGTARGKPRQKRG 279
           GPWL K  T   K +Q RG
Sbjct: 243 GPWL-KANTVAEKLKQGRG 255

BLAST of Lag0008566 vs. ExPASy TrEMBL
Match: A0A5C7HB59 (Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 3.9e-35
Identity = 110/354 (31.07%), Postives = 183/354 (51.69%), Query Frame = 0

Query: 28  ISKQLEKLNITAEERGNIVRMKDEDLKKKVQDMENILVCKILTEKSINPEIFKSMIPRIW 87
           I++  E L++ AEE G ++ M +E     V+D+   LV K+L+ K +N E FK +I +IW
Sbjct: 6   IARLYENLSL-AEEDGVVLEMSEETSIDGVKDVNRCLVGKVLSYKKVNREAFKGLIEQIW 65

Query: 88  GMEGKVTIKKAGENMFECNFDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRIQFRH 147
              G+V ++  G+N+F   F++   + R+++  PW + N+L+  E+  G    S++ F  
Sbjct: 66  SPFGQVEVESVGDNLFMFYFNNGEDRNRVLQRGPWHFGNSLIVLEKSTGEGNVSKLGFNR 125

Query: 148 VPFWVHFLDLPRICFNRKWAEDLGNAVGVFERVDFDKDEYEV-GESMRVRVKIDVQKPLR 207
             FWV   D+P +C NR+ A+ L   +G  E V+   +  E  G+ M V+V+ID+ KPL+
Sbjct: 126 ADFWVQIHDIPILCMNRRTAKWLAKQIG--EVVEIPSESRECWGKFMWVKVRIDILKPLK 185

Query: 208 RGTVITLGTNAEEEWIDMRYEKLPEFCYGCGRIGHLARECTDLEAMNKEELD-----YGP 267
           R   + +G   E   + ++YEKLP+FCY CGR+G+  +EC D EA  K  L+     +G 
Sbjct: 186 RWLKLKIGQTDEVTLVSLKYEKLPDFCYACGRMGYGMKECLDEEA-RKMALEGPLTRFGS 245

Query: 268 WLRKEGTARGKPRQKRGGGGGKHQREDKDQKQRWIEKKNGNKAE-EKENQEAHRP-EKPP 327
           WL+     + KPR    G G    R           + +G   + E +N  +H+P    P
Sbjct: 246 WLKATALDKSKPRLNSQGNGSSSDR----------ARSSGTSHDIEGDNSISHKPGYLIP 305

Query: 328 EKMEVQSPVEPRNTTNQTVSSKSQRTEDAMMVDQTPRNTENQMVEKEKRKVCER 374
           ++ EV SPV  +    + +  K  +T   +  D  P+  +  +    + KV  R
Sbjct: 306 QRREVSSPVTAKK-KKKMIEEKPVQTLQPVCEDGPPKTDDMWVDGLGREKVGSR 344

BLAST of Lag0008566 vs. TAIR 10
Match: AT3G42140.1 (zinc ion binding;nucleic acid binding )

HSP 1 Score: 50.8 bits (120), Expect = 3.8e-06
Identity = 30/140 (21.43%), Postives = 54/140 (38.57%), Query Frame = 0

Query: 107 FDSKYRKRRIMEASPWIYDNALLAFEEIKGTERYSRIQFRHVPFWVHFLDLPRICFNRKW 166
           F S+     I+   PW +++ +   +  + T+ +S  +F+ +PFW+    +P      + 
Sbjct: 66  FQSEESMFSILRRGPWSFNDWMCVIQ--RWTKLHSDAEFKRIPFWIQIRGIPLRFLTARI 125

Query: 167 AEDLGNAVGVFERVDFDKDEYEVGESMRVRVKIDVQKPLRRGTVITLGTNAEEEWIDMRY 226
              +G  +G+F   +  +D             + V K                     +Y
Sbjct: 126 ITSIGERMGLFLETNLGRD-------------VSVLK--------------------FQY 170

Query: 227 EKLPEFCYGCGRIGHLAREC 247
           EKL  FC  CG + H A EC
Sbjct: 186 EKLKNFCTTCGMLSHDASEC 170

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
TXG57113.12.1e-3835.71hypothetical protein EZV62_018426 [Acer yangbiense][more]
XP_028122006.11.7e-3736.43uncharacterized protein LOC114319195 [Camellia sinensis][more]
TXG54013.18.7e-3729.81hypothetical protein EZV62_019269 [Acer yangbiense][more]
XP_022132681.11.9e-3633.88uncharacterized protein LOC111005481 [Momordica charantia][more]
XP_028071384.14.3e-3635.80uncharacterized protein LOC114273772 [Camellia sinensis][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5C7HJ971.0e-3835.71CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01842... [more]
A0A5C7H9Y24.2e-3729.81CCHC-type domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_01926... [more]
A0A6J1BSZ19.4e-3733.88uncharacterized protein LOC111005481 OS=Momordica charantia OX=3673 GN=LOC111005... [more]
A0A1S8AC252.3e-3536.68CCHC-type domain-containing protein (Fragment) OS=Citrus limon OX=2708 PE=4 SV=1[more]
A0A5C7HB593.9e-3531.07Uncharacterized protein OS=Acer yangbiense OX=1000413 GN=EZV62_022545 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G42140.13.8e-0621.43zinc ion binding;nucleic acid binding [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001878Zinc finger, CCHC-typeSMARTSM00343c2hcfinal6coord: 232..248
e-value: 0.006
score: 24.9
IPR001878Zinc finger, CCHC-typePROSITEPS50158ZF_CCHCcoord: 233..248
score: 10.312031
IPR025558Domain of unknown function DUF4283PFAMPF14111DUF4283coord: 54..197
e-value: 3.6E-25
score: 88.2
IPR025836Zinc knuckle CX2CX4HX4CPFAMPF14392zf-CCHC_4coord: 199..247
e-value: 8.0E-14
score: 51.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 263..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 481..503
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 359..386
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..32
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 280..324
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 9..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 327..358
NoneNo IPR availablePANTHERPTHR31286:SF84SUBFAMILY NOT NAMEDcoord: 34..320
IPR040256Uncharacterized protein At4g02000-likePANTHERPTHR31286GLYCINE-RICH CELL WALL STRUCTURAL PROTEIN 1.8-LIKEcoord: 34..320

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008566.1Lag0008566.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003676 nucleic acid binding
molecular_function GO:0008270 zinc ion binding