Lag0008559 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0008559
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Retrotrans_gag domain-containing protein
Location	chr9: 25354792 .. 25355727 (-)
RNA-Seq Expression	Lag0008559
Synteny	Lag0008559

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGACAAGAATGGAAACACGAGTAGAGAATCTTGAAGGACGAATGTTGGAATTGAGCAAGGAAATGGCCGGAATGAGGCAAGAGATTTCGGGAATACGCGGATCTATTTCGACCGAAGTAGAAGCTGCGGTATCGAAGAGTGTGGGTGAGGCGATGAAGGAGGGAATGCAAGCCATCCTCGCCCGGATCGAAGGGTTGAAATCCACGGATCAGGCCGTGGATAACAGGAAAACGAAAGGGAAGAACATTATCGGATCGGAGGAAGTGGCTGCCGAAGTAGGGGAGGGGAGTAACACGGTTTTACAATCACACCTGACCAAGTCTCTGGCTCCGGTGTTCGATCTTCGTCTGCGGAAACTGGAAATACCAGTGTTTGGGGGAGCAAGTCCGTTGGAATGGTTACATCAAGTAGAACGGTACTTCACCGTCAACCGACTGACGGAATCGGAGAAGCTGGAAGCGGCGGTACTGTGTCTCGAAGGCGTGGCGCTTAAGTGGCATTACTATGAGAACAAATTGGGTTCGTTCAGTAACTGGGAGGATTTCCGTCGATTATTGTTACGGAGGTTTCTGGCGCCAAAAGAAGGTACGCTTCACGAACGATTCTTTGCTCTCAAGCAAGAATCTACTGTAGCTGAATATAGGGAGAAATTTGAGGAATTTGCTGCTGCCGTAGATAACCTAGACGGCGATTCGTTGGAGGGGAAATTTGTTGATGGACTGGTTGAAGACATTAAGGTCGAGATGAGAATATGTATGCCTGTTGGGCTAATGACACTCTTGGTACCCTTTTCCCCTGTCTTTATATCCTCTCTCTTCGGAAGGATGAGTTTGTTAGCTGTGTTTTGTTTGATCTCCCATCCCTCCTTCACAAATACCATTTCAGAAGACTCTTTCAGAACAATTATCCGCTTTGCCTCCTTTGATATATAA

mRNA sequence

ATGGCGACAAGAATGGAAACACGAGTAGAGAATCTTGAAGGACGAATGTTGGAATTGAGCAAGGAAATGGCCGGAATGAGGCAAGAGATTTCGGGAATACGCGGATCTATTTCGACCGAAGTAGAAGCTGCGGTATCGAAGAGTGTGGGTGAGGCGATGAAGGAGGGAATGCAAGCCATCCTCGCCCGGATCGAAGGGTTGAAATCCACGGATCAGGCCGTGGATAACAGGAAAACGAAAGGGAAGAACATTATCGGATCGGAGGAAGTGGCTGCCGAAGTAGGGGAGGGGAGTAACACGGTTTTACAATCACACCTGACCAAGTCTCTGGCTCCGGTGTTCGATCTTCGTCTGCGGAAACTGGAAATACCAGTGTTTGGGGGAGCAAGTCCGTTGGAATGGTTACATCAAGTAGAACGGTACTTCACCGTCAACCGACTGACGGAATCGGAGAAGCTGGAAGCGGCGGTACTGTGTCTCGAAGGCGTGGCGCTTAAGTGGCATTACTATGAGAACAAATTGGGTTCGTTCAGTAACTGGGAGGATTTCCGTCGATTATTGTTACGGAGGTTTCTGGCGCCAAAAGAAGGTACGCTTCACGAACGATTCTTTGCTCTCAAGCAAGAATCTACTGTAGCTGAATATAGGGAGAAATTTGAGGAATTTGCTGCTGCCGTAGATAACCTAGACGGCGATTCGTTGGAGGGGAAATTTGTTGATGGACTGGTTGAAGACATTAAGGTCGAGATGAGAATATGTATGCCTGTTGGGCTAATGACACTCTTGGTACCCTTTTCCCCTGTCTTTATATCCTCTCTCTTCGGAAGGATGAGTTTGTTAGCTGTGTTTTGTTTGATCTCCCATCCCTCCTTCACAAATACCATTTCAGAAGACTCTTTCAGAACAATTATCCGCTTTGCCTCCTTTGATATATAA

Coding sequence (CDS)

ATGGCGACAAGAATGGAAACACGAGTAGAGAATCTTGAAGGACGAATGTTGGAATTGAGCAAGGAAATGGCCGGAATGAGGCAAGAGATTTCGGGAATACGCGGATCTATTTCGACCGAAGTAGAAGCTGCGGTATCGAAGAGTGTGGGTGAGGCGATGAAGGAGGGAATGCAAGCCATCCTCGCCCGGATCGAAGGGTTGAAATCCACGGATCAGGCCGTGGATAACAGGAAAACGAAAGGGAAGAACATTATCGGATCGGAGGAAGTGGCTGCCGAAGTAGGGGAGGGGAGTAACACGGTTTTACAATCACACCTGACCAAGTCTCTGGCTCCGGTGTTCGATCTTCGTCTGCGGAAACTGGAAATACCAGTGTTTGGGGGAGCAAGTCCGTTGGAATGGTTACATCAAGTAGAACGGTACTTCACCGTCAACCGACTGACGGAATCGGAGAAGCTGGAAGCGGCGGTACTGTGTCTCGAAGGCGTGGCGCTTAAGTGGCATTACTATGAGAACAAATTGGGTTCGTTCAGTAACTGGGAGGATTTCCGTCGATTATTGTTACGGAGGTTTCTGGCGCCAAAAGAAGGTACGCTTCACGAACGATTCTTTGCTCTCAAGCAAGAATCTACTGTAGCTGAATATAGGGAGAAATTTGAGGAATTTGCTGCTGCCGTAGATAACCTAGACGGCGATTCGTTGGAGGGGAAATTTGTTGATGGACTGGTTGAAGACATTAAGGTCGAGATGAGAATATGTATGCCTGTTGGGCTAATGACACTCTTGGTACCCTTTTCCCCTGTCTTTATATCCTCTCTCTTCGGAAGGATGAGTTTGTTAGCTGTGTTTTGTTTGATCTCCCATCCCTCCTTCACAAATACCATTTCAGAAGACTCTTTCAGAACAATTATCCGCTTTGCCTCCTTTGATATATAA

Protein sequence

MATRMETRVENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGEGSNTVLQSHLTKSLAPVFDLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICMPVGLMTLLVPFSPVFISSLFGRMSLLAVFCLISHPSFTNTISEDSFRTIIRFASFDI

Homology

[Close]

BLAST of Lag0008559 vs. NCBI nr
Match: XP_038904464.1 (uncharacterized protein LOC120090832 [Benincasa hispida])

HSP 1 Score: 147.9 bits (372), Expect = 1.4e-31
Identity = 92/265 (34.72%), Postives = 141/265 (53.21%), Query Frame = 0


Query: 1   MATRMETRVENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGM--- 60
           M  +ME R+  +E ++  L   M     +       I+  +  A  +++GE +++ M   
Sbjct: 1   MVKKMEARLSAVEEQLTLLQVGMENRMDQRFREMQQITESMMIAKIEALGETLEQKMIRP 60

Query: 61  -QAILARIEGLKSTDQAVDNRKTKGKNIIGSEEVAAEVGEGSNTVLQSHLTKSLAPVFDL 120
            +    ++E LK  +     +    +   G +    +VGE    +L           FD+
Sbjct: 61  LEVWSKKLEILKEGESGSSEKTVMDR---GKQPAREDVGERREVLL-----------FDM 120

Query: 121 RLRKLEIPVFG---GASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENK 180
           RLRKLEIP+F    G  P+ W H+VERYF VNRL+E +K+EAA+LCLEG AL+WH +E +
Sbjct: 121 RLRKLEIPIFKGEIGEDPMGWFHRVERYFVVNRLSEKDKIEAAILCLEGEALEWHQWEEE 180

Query: 181 LGSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDS 240
               + W  F+  LL RFL  KE     +F  LKQ+ +V  YR +FE+   ++ +L  + 
Sbjct: 181 RTPMNTWAKFKAHLLLRFLPIKEEDRRAQFLTLKQDGSVRAYRRRFEQLLGSLKDLSDEI 240

Query: 241 LEGKFVDGLVEDIKVEMRICMPVGL 259
           LE KFV GL  DI++EMR+   +GL
Sbjct: 241 LESKFVRGLKNDIQIEMRMFKLIGL 251

[Close]

BLAST of Lag0008559 vs. NCBI nr
Match: XP_022848903.1 (uncharacterized protein LOC111371244 [Olea europaea var. sylvestris])

HSP 1 Score: 146.7 bits (369), Expect = 3.2e-31
Identity = 96/250 (38.40%), Postives = 136/250 (54.40%), Query Frame = 0


Query: 12  LEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKSTD 71
           L  RM  L +   G++QE+     +I  E++  +S      +KE  + +L++ EG     
Sbjct: 3   LNDRMSTLEERFEGVQQELHEGLETIKGEIQNDIS-----GLKEKFELLLSKWEG----- 62

Query: 72  QAVDNRKTKGKNIIGSEEVAAEVGEG-SNTVLQSHLTKSLAPV--FDLRLRKLEIPVFGG 131
           QA D    KGK + GS  +AA   E  SN        K L      D R R+LE+PVF G
Sbjct: 63  QAHDG---KGKGVAGSSSMAAPTVESPSNYEEPDQPNKDLEDKGRMDGRSRRLEMPVFHG 122

Query: 132 ASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLL 191
            +P  WL + ERYF++N  +  EK+EAA +C EG AL W+ +E+   +F  WED +  LL
Sbjct: 123 ENPDGWLFKAERYFSINHFSNWEKIEAAAVCFEGEALAWYQWEDGRQTFQRWEDLKAALL 182

Query: 192 RRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKV 251
            RF   +EGT  E+F AL+QE TV +Y   FE  AA +  +  D LEG F++GL   I+ 
Sbjct: 183 LRFRPSQEGTNLEKFLALRQEGTVRDYGRMFEVLAAPLTTVPEDILEGNFINGLKPLIRA 239

Query: 252 EMRICMPVGL 259
           E+R+  P GL
Sbjct: 243 EVRLLKPRGL 239

[Close]

BLAST of Lag0008559 vs. NCBI nr
Match: KAF4360362.1 (hypothetical protein F8388_019448 [Cannabis sativa])

HSP 1 Score: 140.2 bits (352), Expect = 3.0e-29
Identity = 66/144 (45.83%), Postives = 96/144 (66.67%), Query Frame = 0


Query: 115 DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKL 174
           + R R +E+PVF G+ P +W  + ERYF + RLT  E+LEAA+LCLEG AL+W  +EN+ 
Sbjct: 92  EFRPRNIELPVFSGSDPDDWTFRAERYFGLQRLTAEEQLEAAILCLEGPALRWFRWENRR 151

Query: 175 GSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSL 234
                W + + LLLRRFL   EG++++RF AL+Q +TV EYR++FE  A ++  +    L
Sbjct: 152 REIRGWAELKDLLLRRFLPAHEGSVYDRFLALQQTTTVQEYRQQFEALATSLGTVAEPLL 211

Query: 235 EGKFVDGLVEDIKVEMRICMPVGL 259
           E  F+ GL EDI+  +R+  P+GL
Sbjct: 212 ESAFMKGLSEDIQGTLRLLEPIGL 235

[Close]

BLAST of Lag0008559 vs. NCBI nr
Match: TXG60193.1 (hypothetical protein EZV62_014766 [Acer yangbiense])

HSP 1 Score: 138.7 bits (348), Expect = 8.8e-29
Identity = 86/253 (33.99%), Postives = 142/253 (56.13%), Query Frame = 0


Query: 10  ENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKS 69
           +N++ RM  + + +  +R+++    G+I  E+  A++K     ++  MQ   AR+    S
Sbjct: 4   KNMQSRMDTMEEVVVTVREDLQREVGTIKDEI-MAMNKRFDHLLQ--MQEEAARVAASSS 63

Query: 70  TDQAVDNRKTKGKNIIGSEEVAAEVGEGSNTVLQSHLTKSLAPVF----DLRLRKLEIPV 129
                      GK   G E  +     G   +  +H ++  + VF    D R RKLE+PV
Sbjct: 64  -----------GK---GKESTSRVPTVGGPAIGVTHGSEGTSNVFEHRRDFRFRKLEMPV 123

Query: 130 FGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRR 189
           F G +P  W+ + ERYF++ R    EKLEA+V+  EG AL W+ +E+K      WE+ + 
Sbjct: 124 FDGTNPDGWILKAERYFSLQRFNNEEKLEASVIGFEGDALLWYQWEHKKRPMFLWEEMKL 183

Query: 190 LLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVED 249
           L+L++F + +EG+LHE+F AL+Q+ TV EYR KF EF A +DN+  +    +F++GL  +
Sbjct: 184 LILKQFRSTQEGSLHEQFLALRQQGTVKEYRRKFIEFLALLDNVSDEITLSQFINGLNPE 239

Query: 250 IKVEMRICMPVGL 259
           I+ E+R+  P+ L
Sbjct: 244 IQNELRVLDPINL 239

[Close]

BLAST of Lag0008559 vs. NCBI nr
Match: KAF4369344.1 (hypothetical protein F8388_019569 [Cannabis sativa])

HSP 1 Score: 138.7 bits (348), Expect = 8.8e-29
Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 115 DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKL 174
           + R RK+E+PV+ G  P EW ++V+RYF + RL+ +E+LEAA++CLEG AL W  +EN  
Sbjct: 47  EFRARKIELPVYSGDDPDEWTYRVDRYFGLQRLSPAEQLEAAIMCLEGAALNWFRWENSR 106

Query: 175 GSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSL 234
               +WE+ + +L+ RF +  EG +++RFF+L+Q  TV +YR KFE  AAA+  +    L
Sbjct: 107 HVIRSWEELKGMLIHRFRSAHEGPVYDRFFSLRQTETVQDYRRKFESLAAAMGTMGDQGL 166

Query: 235 EGKFVDGLVEDIKVEMRICMPVGLM 260
           +  FV+GL  DI+  +R+  P GL+
Sbjct: 167 QAAFVNGLRMDIQGPLRLLHPNGLI 191

[Close]

BLAST of Lag0008559 vs. ExPASy TrEMBL
Match: A0A7J6EPJ5 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_019448 PE=4 SV=1)

HSP 1 Score: 140.2 bits (352), Expect = 1.5e-29
Identity = 66/144 (45.83%), Postives = 96/144 (66.67%), Query Frame = 0


Query: 115 DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKL 174
           + R R +E+PVF G+ P +W  + ERYF + RLT  E+LEAA+LCLEG AL+W  +EN+ 
Sbjct: 92  EFRPRNIELPVFSGSDPDDWTFRAERYFGLQRLTAEEQLEAAILCLEGPALRWFRWENRR 151

Query: 175 GSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSL 234
                W + + LLLRRFL   EG++++RF AL+Q +TV EYR++FE  A ++  +    L
Sbjct: 152 REIRGWAELKDLLLRRFLPAHEGSVYDRFLALQQTTTVQEYRQQFEALATSLGTVAEPLL 211

Query: 235 EGKFVDGLVEDIKVEMRICMPVGL 259
           E  F+ GL EDI+  +R+  P+GL
Sbjct: 212 ESAFMKGLSEDIQGTLRLLEPIGL 235

[Close]

BLAST of Lag0008559 vs. ExPASy TrEMBL
Match: A0A5C7HSW3 (Chromo domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_014766 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.3e-29
Identity = 86/253 (33.99%), Postives = 142/253 (56.13%), Query Frame = 0


Query: 10  ENLEGRMLELSKEMAGMRQEISGIRGSISTEVEAAVSKSVGEAMKEGMQAILARIEGLKS 69
           +N++ RM  + + +  +R+++    G+I  E+  A++K     ++  MQ   AR+    S
Sbjct: 4   KNMQSRMDTMEEVVVTVREDLQREVGTIKDEI-MAMNKRFDHLLQ--MQEEAARVAASSS 63

Query: 70  TDQAVDNRKTKGKNIIGSEEVAAEVGEGSNTVLQSHLTKSLAPVF----DLRLRKLEIPV 129
                      GK   G E  +     G   +  +H ++  + VF    D R RKLE+PV
Sbjct: 64  -----------GK---GKESTSRVPTVGGPAIGVTHGSEGTSNVFEHRRDFRFRKLEMPV 123

Query: 130 FGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRR 189
           F G +P  W+ + ERYF++ R    EKLEA+V+  EG AL W+ +E+K      WE+ + 
Sbjct: 124 FDGTNPDGWILKAERYFSLQRFNNEEKLEASVIGFEGDALLWYQWEHKKRPMFLWEEMKL 183

Query: 190 LLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVED 249
           L+L++F + +EG+LHE+F AL+Q+ TV EYR KF EF A +DN+  +    +F++GL  +
Sbjct: 184 LILKQFRSTQEGSLHEQFLALRQQGTVKEYRRKFIEFLALLDNVSDEITLSQFINGLNPE 239

Query: 250 IKVEMRICMPVGL 259
           I+ E+R+  P+ L
Sbjct: 244 IQNELRVLDPINL 239

[Close]

BLAST of Lag0008559 vs. ExPASy TrEMBL
Match: A0A7J6E9S0 (Retrotrans_gag domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_029192 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.3e-29
Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 115 DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKL 174
           + R RK+E+PV+ G  P EW ++V+RYF + RL+ +E+LEAA++CLEG AL W  +EN  
Sbjct: 47  EFRARKIELPVYSGDDPDEWTYRVDRYFGLQRLSPAEQLEAAIMCLEGAALNWFRWENSR 106

Query: 175 GSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSL 234
               +WE+ + +L+ RF +  EG +++RFF+L+Q  TV +YR KFE  AAA+  +    L
Sbjct: 107 HVIRSWEELKGMLIHRFRSAHEGPVYDRFFSLRQTETVQDYRRKFESLAAAMGTMGDQGL 166

Query: 235 EGKFVDGLVEDIKVEMRICMPVGLM 260
           +  FV+GL  DI+  +R+  P GL+
Sbjct: 167 QAAFVNGLRMDIQGPLRLLHPNGLI 191

[Close]

BLAST of Lag0008559 vs. ExPASy TrEMBL
Match: A0A7J6FF68 (Retrotrans_gag domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_019569 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 4.3e-29
Identity = 63/145 (43.45%), Postives = 97/145 (66.90%), Query Frame = 0


Query: 115 DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKL 174
           + R RK+E+PV+ G  P EW ++V+RYF + RL+ +E+LEAA++CLEG AL W  +EN  
Sbjct: 47  EFRARKIELPVYSGDDPDEWTYRVDRYFGLQRLSPAEQLEAAIMCLEGAALNWFRWENSR 106

Query: 175 GSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSL 234
               +WE+ + +L+ RF +  EG +++RFF+L+Q  TV +YR KFE  AAA+  +    L
Sbjct: 107 HVIRSWEELKGMLIHRFRSAHEGPVYDRFFSLRQTETVQDYRRKFESLAAAMGTMGDQGL 166

Query: 235 EGKFVDGLVEDIKVEMRICMPVGLM 260
           +  FV+GL  DI+  +R+  P GL+
Sbjct: 167 QAAFVNGLRMDIQGPLRLLHPNGLI 191

[Close]

BLAST of Lag0008559 vs. ExPASy TrEMBL
Match: A0A7J6GB68 (Retrotrans_gag domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_020377 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 1.6e-28
Identity = 66/144 (45.83%), Postives = 96/144 (66.67%), Query Frame = 0


Query: 115 DLRLRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKL 174
           + R R +E+P+F G+ P +W ++ ERYF + RLT  E+LEAAVLCLEG AL+W  +EN+ 
Sbjct: 71  EFRPRNIELPLFAGSDPDDWTYRAERYFGLQRLTAEEQLEAAVLCLEGPALRWFRWENRR 130

Query: 175 GSFSNWEDFRRLLLRRFLAPKEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSL 234
               +W + + LLLRRFL   EG+ ++RF AL+Q STV EYR++FE   A++  +    L
Sbjct: 131 REIRSWGELKDLLLRRFLPAHEGSAYDRFLALQQTSTVQEYRQQFEALTASLGAVAEPLL 190

Query: 235 EGKFVDGLVEDIKVEMRICMPVGL 259
           E  F+ GL  +I+  +R+  PVGL
Sbjct: 191 ESAFLKGLNSEIQGTLRLLEPVGL 214

[Close]

BLAST of Lag0008559 vs. TAIR 10
Match: AT1G67020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: leaf; Has 72 Blast hits to 72 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 72; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 75.9 bits (185), Expect = 6.5e-14
Identity = 34/74 (45.95%), Postives = 46/74 (62.16%), Query Frame = 0


Query: 118 LRKLEIPVFGGASPLEWLHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSF 177
           +R++E+PVF G+   EW  +VER+F V R  +S+KL+   L LEGVALKW   E     F
Sbjct: 107 IRRIEMPVFDGSGVYEWFSKVERFFRVGRYQDSDKLDLVALSLEGVALKWFLREMSTLEF 166

Query: 178 SNWEDFRRLLLRRF 192
            +W  F + LL RF
Sbjct: 167 RDWNSFEQRLLARF 180

[Close]

BLAST of Lag0008559 vs. TAIR 10
Match: AT3G42723.1 (aminoacyl-tRNA ligases;ATP binding;nucleotide binding )

HSP 1 Score: 62.4 bits (150), Expect = 7.5e-10
Identity = 36/128 (28.12%), Postives = 62/128 (48.44%), Query Frame = 0


Query: 135 LHQVERYFTVNRLTESEKLEAAVLCLEGVALKWHYYENKLGSFSNWEDFRRLLLRRFLAP 194
           L   E YF  N + E E+L+     LEG   +W  +  K  S ++W++F+ ++ R     
Sbjct: 275 LSNFENYFGENNIPEQERLQIVYSNLEGDIGQWIKHLWKKNSPTSWKEFKCMMARETKTT 334

Query: 195 KEGTLHERFFALKQESTVAEYREKFEEFAAAVDNLDGDSLEGKFVDGLVEDIKVEMRICM 254
            +      +  ++QE +V EYRE+FE        L G  LE  F+ GL   ++  +R   
Sbjct: 335 MKVNHQPHYSGIQQEGSVREYRERFEALCLGSVILPGQGLEALFLQGLQPSLQTAVRELK 394

Query: 255 PVGLMTLL 263
           P G++ ++
Sbjct: 395 PNGIVQMM 402

The following BLAST results are available for this feature:

BLAST of Lag0008559 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038904464.1	1.4e-31	34.72	uncharacterized protein LOC120090832 [Benincasa hispida]	[more]
XP_022848903.1	3.2e-31	38.40	uncharacterized protein LOC111371244 [Olea europaea var. sylvestris]	[more]
KAF4360362.1	3.0e-29	45.83	hypothetical protein F8388_019448 [Cannabis sativa]	[more]
TXG60193.1	8.8e-29	33.99	hypothetical protein EZV62_014766 [Acer yangbiense]	[more]
KAF4369344.1	8.8e-29	43.45	hypothetical protein F8388_019569 [Cannabis sativa]	[more]

BLAST of Lag0008559 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0008559 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A7J6EPJ5	1.5e-29	45.83	Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_019448 PE=4 SV=1	[more]
A0A5C7HSW3	4.3e-29	33.99	Chromo domain-containing protein OS=Acer yangbiense OX=1000413 GN=EZV62_014766 P...	[more]
A0A7J6E9S0	4.3e-29	43.45	Retrotrans_gag domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_029...	[more]
A0A7J6FF68	4.3e-29	43.45	Retrotrans_gag domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_019...	[more]
A0A7J6GB68	1.6e-28	45.83	Retrotrans_gag domain-containing protein OS=Cannabis sativa OX=3483 GN=F8388_020...	[more]

BLAST of Lag0008559 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G67020.1	6.5e-14	45.95	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G42723.1	7.5e-10	28.13	aminoacyl-tRNA ligases;ATP binding;nucleotide binding	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 2..29
None	No IPR available	PANTHER	PTHR34482	DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKE	coord: 99..260
None	No IPR available	PANTHER	PTHR34482:SF20	SUBFAMILY NOT NAMED	coord: 99..260
IPR005162	Retrotransposon gag domain	PFAM	PF03732	Retrotrans_gag	coord: 156..242 e-value: 8.5E-12 score: 45.2

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0008559.1	Lag0008559.1	mRNA