Lag0008543 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008543
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase
Locationchr9: 24907500 .. 24908916 (-)
RNA-Seq ExpressionLag0008543
SyntenyLag0008543
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTCTAGTGGGAGTCGAGATAGCCGTCGTTCTGACTCTCCGGGTATCCCCAAAGTCGAATCGCACCCTGAGGCAAATCCCCCTATTCCTCCTCCGATGCCTCATGTAGTGTTGTCATTGGAAGCGTTGCAAGCTTTGATTGACAATGCAATCCAAAACTATCTACAGCACCCTGATGTGAATCAAGCTTCTACACGAAATAAGGATGTCCGATTCTTTCGAAGCTTCAATAAAGCCAACCCTCCATCATTCAATGGCCTATCTGGAAGTTCGAGAGTTGTCGAAGAGTGGACCTCAGAGCTGGAAGCCCTATTCCAATACCTTGGAGCTGATGCCCGACAACGTGTCTTAGGAGCTACCTCATTGCTCAGAGGTCACGCACGCAATTGGTGGAATTTAGTGGGCCAGCAAGAGGATCGCCCCAACAATCCCTTGTCATGGACAAGATTCAAGGGTCTTATGCGAGACCAGTTTGTCCAACGCTTCCCTAATGATGAAGTTGAAGATCTGGAAGTGGAGTTTCTATTTCTCGTGCAGGGGAGCATGCCCGTAGTGCAATACGAAAGAAGATTTGCAGAGTTGTCTCATTTCGTTCCGGAGCTAGTTGCCACTGAGCCAAGAAGAATTGGAAGGTTCATCAATGGCTTGCGTAGGGAATTAAGAGCGTTGGTCAGGCAAGGACAACTAACTACTTACGCAGGAGCTTTTGCAAGCGCAATAGCCTGTGGGATAGCGAAGTTCCTAGGACGGAGCAGTTCTAGGAGGTGGGCACTTCATCTGGTGTCAAGCGTAAGCACGAGGAGTTGGATCCGACGTTTGGTCATCAAGATCAAAAGTTTTTGCCAAGACTTGAGCTTAGCGAGTTTGTTGTAAGGGAAGCCAAGATCTCGAAGAGTTCAAAGGTTCCCTCCGAAAACGAGCTAAAAGATGGCAAGCAAGAGAAGTTGATGCCTTGGATTTCTGATGAAGAACTAAAGGCAGAATACCCAGAGCTTTACAACGGCGAATCTGAAGAAGAGGAAAGTCGCTATAGGCGGGAAGTCGGTTTCACCTCTCGTTTCCAGGTTAGTACTCCTTCCTCGAGTTTATCTATTGCTCTGGGATTTCTGTTCTTGTTTTGATGCTTTGTCACCTGAATCTATCTGTGATATGAATGTCCCTGCATTCGTATTATTTGTCTCGGAGTCAAGTCATTCCTTTATTTCTGTGGCATTGTTTGTCAAGAAAATCATGAGCTAGAATTGCTAGGGAATCTTCTTTTGGTGCCTTGTTATCTAAATCTCCTGGTGATGTGACATCTTAGCCTTGTTTTGGTATGTTTTTGTTGCATCAGTTAGATCCTTCGTTTCCTAGGAAGTTAATGGAAGCTAGTAAGTTGGTTTCCAAGCTCTATCAAGCATCGCCTAGATTCTAA

mRNA sequence

ATGAGTTCTAGTGGGAGTCGAGATAGCCGTCGTTCTGACTCTCCGGGTATCCCCAAAGTCGAATCGCACCCTGAGGCAAATCCCCCTATTCCTCCTCCGATGCCTCATGTAGTGTTGTCATTGGAAGCGTTGCAAGCTTTGATTGACAATGCAATCCAAAACTATCTACAGCACCCTGATGTGAATCAAGCTTCTACACGAAATAAGGATGTCCGATTCTTTCGAAGCTTCAATAAAGCCAACCCTCCATCATTCAATGGCCTATCTGGAAGTTCGAGAGTTGTCGAAGAGTGGACCTCAGAGCTGGAAGCCCTATTCCAATACCTTGGAGCTGATGCCCGACAACGTGTCTTAGGAGCTACCTCATTGCTCAGAGGTCACGCACGCAATTGGTGGAATTTAGTGGGCCAGCAAGAGGATCGCCCCAACAATCCCTTGTCATGGACAAGATTCAAGGGTCTTATGCGAGACCAGTTTGTCCAACGCTTCCCTAATGATGAAGTTGAAGATCTGGAAGTGGAGTTTCTATTTCTCGTGCAGGGGAGCATGCCCGTAGTGCAATACGAAAGAAGATTTGCAGAGTTGTCTCATTTCGTTCCGGAGCTAGTTGCCACTGAGCCAAGAAGAATTGGAAGGTTCATCAATGGCTTGCGTAGGGAATTAAGAGCGTTGGTCAGGCAAGGACAACTAACTACTTACGCAGGAGCTTTTGCAAGCGCAATAGCCTGTGGGATAGCGAAGTTCCTAGGACGGAGCAGTTCTAGGAGACTTGAGCTTAGCGAGTTTGTTGTAAGGGAAGCCAAGATCTCGAAGAGTTCAAAGGTTCCCTCCGAAAACGAGCTAAAAGATGGCAAGCAAGAGAAGTTGATGCCTTGGATTTCTGATGAAGAACTAAAGGCAGAATACCCAGAGCTTTACAACGGCGAATCTGAAGAAGAGGAAAGTCGCTATAGGCGGGAAGTCGGTTTCACCTCTCGTTTCCAGTTAGATCCTTCGTTTCCTAGGAAGTTAATGGAAGCTAGTAAGTTGGTTTCCAAGCTCTATCAAGCATCGCCTAGATTCTAA

Coding sequence (CDS)

ATGAGTTCTAGTGGGAGTCGAGATAGCCGTCGTTCTGACTCTCCGGGTATCCCCAAAGTCGAATCGCACCCTGAGGCAAATCCCCCTATTCCTCCTCCGATGCCTCATGTAGTGTTGTCATTGGAAGCGTTGCAAGCTTTGATTGACAATGCAATCCAAAACTATCTACAGCACCCTGATGTGAATCAAGCTTCTACACGAAATAAGGATGTCCGATTCTTTCGAAGCTTCAATAAAGCCAACCCTCCATCATTCAATGGCCTATCTGGAAGTTCGAGAGTTGTCGAAGAGTGGACCTCAGAGCTGGAAGCCCTATTCCAATACCTTGGAGCTGATGCCCGACAACGTGTCTTAGGAGCTACCTCATTGCTCAGAGGTCACGCACGCAATTGGTGGAATTTAGTGGGCCAGCAAGAGGATCGCCCCAACAATCCCTTGTCATGGACAAGATTCAAGGGTCTTATGCGAGACCAGTTTGTCCAACGCTTCCCTAATGATGAAGTTGAAGATCTGGAAGTGGAGTTTCTATTTCTCGTGCAGGGGAGCATGCCCGTAGTGCAATACGAAAGAAGATTTGCAGAGTTGTCTCATTTCGTTCCGGAGCTAGTTGCCACTGAGCCAAGAAGAATTGGAAGGTTCATCAATGGCTTGCGTAGGGAATTAAGAGCGTTGGTCAGGCAAGGACAACTAACTACTTACGCAGGAGCTTTTGCAAGCGCAATAGCCTGTGGGATAGCGAAGTTCCTAGGACGGAGCAGTTCTAGGAGACTTGAGCTTAGCGAGTTTGTTGTAAGGGAAGCCAAGATCTCGAAGAGTTCAAAGGTTCCCTCCGAAAACGAGCTAAAAGATGGCAAGCAAGAGAAGTTGATGCCTTGGATTTCTGATGAAGAACTAAAGGCAGAATACCCAGAGCTTTACAACGGCGAATCTGAAGAAGAGGAAAGTCGCTATAGGCGGGAAGTCGGTTTCACCTCTCGTTTCCAGTTAGATCCTTCGTTTCCTAGGAAGTTAATGGAAGCTAGTAAGTTGGTTTCCAAGCTCTATCAAGCATCGCCTAGATTCTAA

Protein sequence

MSSSGSRDSRRSDSPGIPKVESHPEANPPIPPPMPHVVLSLEALQALIDNAIQNYLQHPDVNQASTRNKDVRFFRSFNKANPPSFNGLSGSSRVVEEWTSELEALFQYLGADARQRVLGATSLLRGHARNWWNLVGQQEDRPNNPLSWTRFKGLMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYERRFAELSHFVPELVATEPRRIGRFINGLRRELRALVRQGQLTTYAGAFASAIACGIAKFLGRSSSRRLELSEFVVREAKISKSSKVPSENELKDGKQEKLMPWISDEELKAEYPELYNGESEEEESRYRREVGFTSRFQLDPSFPRKLMEASKLVSKLYQASPRF
Homology
BLAST of Lag0008543 vs. NCBI nr
Match: XP_022155925.1 (uncharacterized protein LOC111022925 [Momordica charantia])

HSP 1 Score: 161.0 bits (406), Expect = 1.9e-35
Identity = 107/278 (38.49%), Postives = 148/278 (53.24%), Query Frame = 0

Query: 18  PKVESHPEANPPIPPPMP-HVVLSLEALQALIDNAI---QNYLQHPDVNQASTRNKDVRF 77
           P       A+  +PP +P  VVL  EALQ L+DNA       +Q P   Q S   ++V+F
Sbjct: 15  PNCRGEGAADLNVPPVVPGRVVLLAEALQVLLDNANGAGGAQVQQPSRGQIS--QEEVQF 74

Query: 78  FRSFNKANPPSFNGLSGSSRVVEEWTSELEALFQYLGADARQRVLGATSLLRGHARNWWN 137
            R F +  PP FNG+S      EEW  ELEAL+ YLG     +V GA  +L+G A NWW 
Sbjct: 75  IRDFKRFGPPVFNGVSERPTAAEEWVRELEALYVYLGCSDDFKVRGAVFMLQGEAVNWWE 134

Query: 138 LVGQQEDRPNNPLSWTRFKGLMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYERRFA 197
            V   ED  N P++W RFK L+ + +   FP     +   EFL L Q S+ V QYER+F 
Sbjct: 135 SVAAAEDHANVPVTWARFKDLLYEYY---FPVTVRNEKRAEFLRLTQESLIVAQYERKFT 194

Query: 198 ELSHFVPELVATEPRRIGRFINGLRRELRALVRQGQLTTYAGAFASAIACGIAKFLGRSS 257
           ELS F  + + TE  +I +FI+GLRRE++ L+   + TTYA A   A+   + K L    
Sbjct: 195 ELSRFGMQYIPTEQLKIDKFIDGLRREIKGLLVLKEPTTYAAAVRCALV--MDKCLEEPQ 254

Query: 258 SRRLELSEFVVREAKISKSSKVPSENELKDGKQEKLMP 292
           S+++  S   V+    S SS  PS     +G+++   P
Sbjct: 255 SQQVIGSSSGVKRKFASFSSSQPSRGHQHNGQRQTTPP 285

BLAST of Lag0008543 vs. NCBI nr
Match: XP_022156172.1 (uncharacterized protein LOC111023126 [Momordica charantia])

HSP 1 Score: 160.6 bits (405), Expect = 2.5e-35
Identity = 95/237 (40.08%), Postives = 129/237 (54.43%), Query Frame = 0

Query: 15  PGIP--KVESHPEANPP-IPPPMPHVVLSLEALQALIDNAI-QNYLQHPDVNQASTRNKD 74
           P +P   V   P+A P  +P   P V L  EALQ L+DNA      Q     +A  + ++
Sbjct: 29  PAVPGGLVPPVPQAAPQGVPQVNPQVALLAEALQVLLDNANGAGGAQAQQPRRAQIQQEE 88

Query: 75  VRFFRSFNKANPPSFNGLSGSSRVVEEWTSELEALFQYLGADARQRVLGATSLLRGHARN 134
           V+F R F +  P  FNG+S      EEW  ELEAL  YLG     +V GA  +LRG   N
Sbjct: 89  VQFIRDFKRFGPTVFNGVSERPTAAEEWVKELEALHVYLGCSDEFKVRGAVFMLRGETVN 148

Query: 135 WWNLVGQQEDRPNNPLSWTRFKGLMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYER 194
           WW  V   ED  N P++WTRFK L+ + +   FP     +   EFL L QGS+ V QYER
Sbjct: 149 WWKSVAAAEDHDNTPVTWTRFKDLLYEYY---FPVTVRNEKRAEFLRLTQGSLTVAQYER 208

Query: 195 RFAELSHFVPELVATEPRRIGRFINGLRRELRALVRQGQLTTYAGAFASAIACGIAK 248
           +F ELS F  + + T+  +I +FI+GLRRE++ L+   + TTYA A   A+   + +
Sbjct: 209 KFTELSRFGMQYIPTQQLKIDKFIDGLRREIKGLLVLKEPTTYAAAVRGAMLXRVGR 262

BLAST of Lag0008543 vs. NCBI nr
Match: XP_022158645.1 (uncharacterized protein LOC111025102 [Momordica charantia])

HSP 1 Score: 160.2 bits (404), Expect = 3.2e-35
Identity = 88/208 (42.31%), Postives = 119/208 (57.21%), Query Frame = 0

Query: 35  PHVVLSLEALQALIDNAIQ-NYLQHPDVNQASTRNKDVRFFRSFNKANPPSFNGLSGSSR 94
           P V L  EALQ L+DNA +    Q     +A  + ++V+F R F +  PP FNG+S    
Sbjct: 3   PQVALLAEALQVLLDNANEAGGAQVQQPRRAQIQQEEVQFIRDFKRFGPPVFNGVSERPT 62

Query: 95  VVEEWTSELEALFQYLGADARQRVLGATSLLRGHARNWWNLVGQQEDRPNNPLSWTRFKG 154
             EEW  ELEAL+ YLG     +V GA  +L G A NWW  V   ED  N P++W RFK 
Sbjct: 63  AAEEWVRELEALYVYLGCSDEFKVRGAVFMLWGEAVNWWESVAAAEDHANVPVTWARFKD 122

Query: 155 LMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYERRFAELSHFVPELVATEPRRIGRF 214
           L+ + +   FP     +   EFL L QGS+ V Q+ER+F ELS F  + + TE  +I +F
Sbjct: 123 LLYEYY---FPVTVRNEKRAEFLRLTQGSLTVAQHERKFTELSRFGMQYIPTEQLKIDKF 182

Query: 215 INGLRRELRALVRQGQLTTYAGAFASAI 242
           I+GLRRE++ L+   + TTYA A   A+
Sbjct: 183 IDGLRREIKGLIILKEPTTYAAAVRCAL 207

BLAST of Lag0008543 vs. NCBI nr
Match: XP_022155341.1 (uncharacterized protein LOC111022474 [Momordica charantia])

HSP 1 Score: 160.2 bits (404), Expect = 3.2e-35
Identity = 94/232 (40.52%), Postives = 128/232 (55.17%), Query Frame = 0

Query: 11  RSDSPGIPKVESHPEANPPIPPPMPHVVLSLEALQALIDNAI-QNYLQHPDVNQASTRNK 70
           R  +P +P++     A   +P   P V L  EALQ L+DNA      Q     +A  + +
Sbjct: 33  RGVAPPVPQL-----APQGVPQVNPQVALLAEALQVLLDNANGAGGAQGQQPRRAQIQQE 92

Query: 71  DVRFFRSFNKANPPSFNGLSGSSRVVEEWTSELEALFQYLGADARQRVLGATSLLRGHAR 130
           +V+F R F +  PP FNG+S      EEW  ELEAL+ YLG     +V GA  +LRG A 
Sbjct: 93  EVQFIRDFKRFGPPVFNGVSERPTATEEWVRELEALYVYLGCSDEFKVRGAMFMLRGEAV 152

Query: 131 NWWNLVGQQEDRPNNPLSWTRFKGLMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYE 190
           NWW  V   ED  N P++W RFK L+ + +   FP     +   EFL L QGS+ V QYE
Sbjct: 153 NWWESVAAAEDHANVPVTWARFKDLLYEYY---FPVTVRNEKRAEFLRLTQGSLTVTQYE 212

Query: 191 RRFAELSHFVPELVATEPRRIGRFINGLRRELRALVRQGQLTTYAGAFASAI 242
           R+F ELS F  + + TE  +I +FI+ LRRE++ L+   + TTYA A   A+
Sbjct: 213 RKFTELSRFGMQYIPTEQLKIDKFIDDLRREIKGLLVLKEPTTYAAAVRCAL 256

BLAST of Lag0008543 vs. NCBI nr
Match: XP_022157413.1 (uncharacterized protein LOC111024114 [Momordica charantia])

HSP 1 Score: 159.8 bits (403), Expect = 4.2e-35
Identity = 93/220 (42.27%), Postives = 122/220 (55.45%), Query Frame = 0

Query: 24  PEANPP-IPPPMPHVVLSLEALQALIDNAI-QNYLQHPDVNQASTRNKDVRFFRSFNKAN 83
           P+A P  +P   P V L  EALQ L+DNA      Q     +A     +V+F R F +  
Sbjct: 40  PQAAPQGVPQVNPQVALLAEALQVLLDNANGAGGAQVQQPRRAQIPQDEVQFIRDFKRFG 99

Query: 84  PPSFNGLSGSSRVVEEWTSELEALFQYLGADARQRVLGATSLLRGHARNWWNLVGQQEDR 143
           PP FNG+S      EEW  ELEAL+ YLG     +V GA  +LRG A NWW  V   ED 
Sbjct: 100 PPVFNGVSERPTATEEWVRELEALYVYLGCSDDFKVRGAVFMLRGEAVNWWESVAAAEDH 159

Query: 144 PNNPLSWTRFKGLMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYERRFAELSHFVPE 203
            N P++W RFK L+ + +   FP     +   EFL L QGS+ V QYER+F ELS F  +
Sbjct: 160 TNVPVTWARFKDLLYEYY---FPVTVRNEKRAEFLRLTQGSLTVAQYERKFTELSRFGMQ 219

Query: 204 LVATEPRRIGRFINGLRRELRALVRQGQLTTYAGAFASAI 242
            + TE  +I +FI+GLR E++ L+   + TTYA A   A+
Sbjct: 220 YIPTEQLKIDKFIDGLRMEIKGLLVVKEPTTYAAAIRCAL 256

BLAST of Lag0008543 vs. ExPASy TrEMBL
Match: A0A6J1DNV8 (uncharacterized protein LOC111022925 OS=Momordica charantia OX=3673 GN=LOC111022925 PE=4 SV=1)

HSP 1 Score: 161.0 bits (406), Expect = 9.1e-36
Identity = 107/278 (38.49%), Postives = 148/278 (53.24%), Query Frame = 0

Query: 18  PKVESHPEANPPIPPPMP-HVVLSLEALQALIDNAI---QNYLQHPDVNQASTRNKDVRF 77
           P       A+  +PP +P  VVL  EALQ L+DNA       +Q P   Q S   ++V+F
Sbjct: 15  PNCRGEGAADLNVPPVVPGRVVLLAEALQVLLDNANGAGGAQVQQPSRGQIS--QEEVQF 74

Query: 78  FRSFNKANPPSFNGLSGSSRVVEEWTSELEALFQYLGADARQRVLGATSLLRGHARNWWN 137
            R F +  PP FNG+S      EEW  ELEAL+ YLG     +V GA  +L+G A NWW 
Sbjct: 75  IRDFKRFGPPVFNGVSERPTAAEEWVRELEALYVYLGCSDDFKVRGAVFMLQGEAVNWWE 134

Query: 138 LVGQQEDRPNNPLSWTRFKGLMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYERRFA 197
            V   ED  N P++W RFK L+ + +   FP     +   EFL L Q S+ V QYER+F 
Sbjct: 135 SVAAAEDHANVPVTWARFKDLLYEYY---FPVTVRNEKRAEFLRLTQESLIVAQYERKFT 194

Query: 198 ELSHFVPELVATEPRRIGRFINGLRRELRALVRQGQLTTYAGAFASAIACGIAKFLGRSS 257
           ELS F  + + TE  +I +FI+GLRRE++ L+   + TTYA A   A+   + K L    
Sbjct: 195 ELSRFGMQYIPTEQLKIDKFIDGLRREIKGLLVLKEPTTYAAAVRCALV--MDKCLEEPQ 254

Query: 258 SRRLELSEFVVREAKISKSSKVPSENELKDGKQEKLMP 292
           S+++  S   V+    S SS  PS     +G+++   P
Sbjct: 255 SQQVIGSSSGVKRKFASFSSSQPSRGHQHNGQRQTTPP 285

BLAST of Lag0008543 vs. ExPASy TrEMBL
Match: A0A6J1DRB3 (uncharacterized protein LOC111023126 OS=Momordica charantia OX=3673 GN=LOC111023126 PE=4 SV=1)

HSP 1 Score: 160.6 bits (405), Expect = 1.2e-35
Identity = 95/237 (40.08%), Postives = 129/237 (54.43%), Query Frame = 0

Query: 15  PGIP--KVESHPEANPP-IPPPMPHVVLSLEALQALIDNAI-QNYLQHPDVNQASTRNKD 74
           P +P   V   P+A P  +P   P V L  EALQ L+DNA      Q     +A  + ++
Sbjct: 29  PAVPGGLVPPVPQAAPQGVPQVNPQVALLAEALQVLLDNANGAGGAQAQQPRRAQIQQEE 88

Query: 75  VRFFRSFNKANPPSFNGLSGSSRVVEEWTSELEALFQYLGADARQRVLGATSLLRGHARN 134
           V+F R F +  P  FNG+S      EEW  ELEAL  YLG     +V GA  +LRG   N
Sbjct: 89  VQFIRDFKRFGPTVFNGVSERPTAAEEWVKELEALHVYLGCSDEFKVRGAVFMLRGETVN 148

Query: 135 WWNLVGQQEDRPNNPLSWTRFKGLMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYER 194
           WW  V   ED  N P++WTRFK L+ + +   FP     +   EFL L QGS+ V QYER
Sbjct: 149 WWKSVAAAEDHDNTPVTWTRFKDLLYEYY---FPVTVRNEKRAEFLRLTQGSLTVAQYER 208

Query: 195 RFAELSHFVPELVATEPRRIGRFINGLRRELRALVRQGQLTTYAGAFASAIACGIAK 248
           +F ELS F  + + T+  +I +FI+GLRRE++ L+   + TTYA A   A+   + +
Sbjct: 209 KFTELSRFGMQYIPTQQLKIDKFIDGLRREIKGLLVLKEPTTYAAAVRGAMLXRVGR 262

BLAST of Lag0008543 vs. ExPASy TrEMBL
Match: A0A6J1DWE6 (uncharacterized protein LOC111025102 OS=Momordica charantia OX=3673 GN=LOC111025102 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-35
Identity = 88/208 (42.31%), Postives = 119/208 (57.21%), Query Frame = 0

Query: 35  PHVVLSLEALQALIDNAIQ-NYLQHPDVNQASTRNKDVRFFRSFNKANPPSFNGLSGSSR 94
           P V L  EALQ L+DNA +    Q     +A  + ++V+F R F +  PP FNG+S    
Sbjct: 3   PQVALLAEALQVLLDNANEAGGAQVQQPRRAQIQQEEVQFIRDFKRFGPPVFNGVSERPT 62

Query: 95  VVEEWTSELEALFQYLGADARQRVLGATSLLRGHARNWWNLVGQQEDRPNNPLSWTRFKG 154
             EEW  ELEAL+ YLG     +V GA  +L G A NWW  V   ED  N P++W RFK 
Sbjct: 63  AAEEWVRELEALYVYLGCSDEFKVRGAVFMLWGEAVNWWESVAAAEDHANVPVTWARFKD 122

Query: 155 LMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYERRFAELSHFVPELVATEPRRIGRF 214
           L+ + +   FP     +   EFL L QGS+ V Q+ER+F ELS F  + + TE  +I +F
Sbjct: 123 LLYEYY---FPVTVRNEKRAEFLRLTQGSLTVAQHERKFTELSRFGMQYIPTEQLKIDKF 182

Query: 215 INGLRRELRALVRQGQLTTYAGAFASAI 242
           I+GLRRE++ L+   + TTYA A   A+
Sbjct: 183 IDGLRREIKGLIILKEPTTYAAAVRCAL 207

BLAST of Lag0008543 vs. ExPASy TrEMBL
Match: A0A6J1DRF5 (uncharacterized protein LOC111022474 OS=Momordica charantia OX=3673 GN=LOC111022474 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 1.6e-35
Identity = 94/232 (40.52%), Postives = 128/232 (55.17%), Query Frame = 0

Query: 11  RSDSPGIPKVESHPEANPPIPPPMPHVVLSLEALQALIDNAI-QNYLQHPDVNQASTRNK 70
           R  +P +P++     A   +P   P V L  EALQ L+DNA      Q     +A  + +
Sbjct: 33  RGVAPPVPQL-----APQGVPQVNPQVALLAEALQVLLDNANGAGGAQGQQPRRAQIQQE 92

Query: 71  DVRFFRSFNKANPPSFNGLSGSSRVVEEWTSELEALFQYLGADARQRVLGATSLLRGHAR 130
           +V+F R F +  PP FNG+S      EEW  ELEAL+ YLG     +V GA  +LRG A 
Sbjct: 93  EVQFIRDFKRFGPPVFNGVSERPTATEEWVRELEALYVYLGCSDEFKVRGAMFMLRGEAV 152

Query: 131 NWWNLVGQQEDRPNNPLSWTRFKGLMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYE 190
           NWW  V   ED  N P++W RFK L+ + +   FP     +   EFL L QGS+ V QYE
Sbjct: 153 NWWESVAAAEDHANVPVTWARFKDLLYEYY---FPVTVRNEKRAEFLRLTQGSLTVTQYE 212

Query: 191 RRFAELSHFVPELVATEPRRIGRFINGLRRELRALVRQGQLTTYAGAFASAI 242
           R+F ELS F  + + TE  +I +FI+ LRRE++ L+   + TTYA A   A+
Sbjct: 213 RKFTELSRFGMQYIPTEQLKIDKFIDDLRREIKGLLVLKEPTTYAAAVRCAL 256

BLAST of Lag0008543 vs. ExPASy TrEMBL
Match: A0A6J1DTA8 (uncharacterized protein LOC111024114 OS=Momordica charantia OX=3673 GN=LOC111024114 PE=4 SV=1)

HSP 1 Score: 159.8 bits (403), Expect = 2.0e-35
Identity = 93/220 (42.27%), Postives = 122/220 (55.45%), Query Frame = 0

Query: 24  PEANPP-IPPPMPHVVLSLEALQALIDNAI-QNYLQHPDVNQASTRNKDVRFFRSFNKAN 83
           P+A P  +P   P V L  EALQ L+DNA      Q     +A     +V+F R F +  
Sbjct: 40  PQAAPQGVPQVNPQVALLAEALQVLLDNANGAGGAQVQQPRRAQIPQDEVQFIRDFKRFG 99

Query: 84  PPSFNGLSGSSRVVEEWTSELEALFQYLGADARQRVLGATSLLRGHARNWWNLVGQQEDR 143
           PP FNG+S      EEW  ELEAL+ YLG     +V GA  +LRG A NWW  V   ED 
Sbjct: 100 PPVFNGVSERPTATEEWVRELEALYVYLGCSDDFKVRGAVFMLRGEAVNWWESVAAAEDH 159

Query: 144 PNNPLSWTRFKGLMRDQFVQRFPNDEVEDLEVEFLFLVQGSMPVVQYERRFAELSHFVPE 203
            N P++W RFK L+ + +   FP     +   EFL L QGS+ V QYER+F ELS F  +
Sbjct: 160 TNVPVTWARFKDLLYEYY---FPVTVRNEKRAEFLRLTQGSLTVAQYERKFTELSRFGMQ 219

Query: 204 LVATEPRRIGRFINGLRRELRALVRQGQLTTYAGAFASAI 242
            + TE  +I +FI+GLR E++ L+   + TTYA A   A+
Sbjct: 220 YIPTEQLKIDKFIDGLRMEIKGLLVVKEPTTYAAAIRCAL 256

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022155925.11.9e-3538.49uncharacterized protein LOC111022925 [Momordica charantia][more]
XP_022156172.12.5e-3540.08uncharacterized protein LOC111023126 [Momordica charantia][more]
XP_022158645.13.2e-3542.31uncharacterized protein LOC111025102 [Momordica charantia][more]
XP_022155341.13.2e-3540.52uncharacterized protein LOC111022474 [Momordica charantia][more]
XP_022157413.14.2e-3542.27uncharacterized protein LOC111024114 [Momordica charantia][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1DNV89.1e-3638.49uncharacterized protein LOC111022925 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DRB31.2e-3540.08uncharacterized protein LOC111023126 OS=Momordica charantia OX=3673 GN=LOC111023... [more]
A0A6J1DWE61.6e-3542.31uncharacterized protein LOC111025102 OS=Momordica charantia OX=3673 GN=LOC111025... [more]
A0A6J1DRF51.6e-3540.52uncharacterized protein LOC111022474 OS=Momordica charantia OX=3673 GN=LOC111022... [more]
A0A6J1DTA82.0e-3542.27uncharacterized protein LOC111024114 OS=Momordica charantia OX=3673 GN=LOC111024... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 120..218
e-value: 7.2E-14
score: 51.8
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..34
NoneNo IPR availablePANTHERPTHR34482:SF4POLYMERASES SUPERFAMILY PROTEIN, PUTATIVE ISOFORM 1-RELATEDcoord: 80..284
NoneNo IPR availablePANTHERPTHR34482DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKEcoord: 80..284

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008543.1Lag0008543.1mRNA