Lag0008540 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0008540
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Red chlorophyll catabolite reductase
Location	chr9: 24844525 .. 24845130 (-)
RNA-Seq Expression	Lag0008540
Synteny	Lag0008540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATAGCAAGTTGGCTGCACTTGAAGCAACCGCAGGGCGGCGCGTTCAACATAACCAACATCGCAGGCTACTTGAAAACCACAAACGACATTCCTCATTTCCAGTTTGAGTTGGTGCAGTGCAGCCCTACTTTTCTCATCTTCTTCCTCGACCTGATCCCTCGAACTGACATCGTCCTCAGCCCCGACTACCTTGCCACCTACTACGAGGAGACTGGGCTTGAACAGCACCGGCAACGGCTCGCTGTGCTGCCTGAAGTAAGCCCTTACTTCTCGTCGTCGCTCTACTTTCGGAAAGTTGTTTCGTCGACGGGAATTCTAGTGAGTGTCAAGTGTGAGGAGAGCGAGTCCAGGCGTGTGGAGGAGATTGTTCGTGACCAAATCAGTCCAATCTCGAAAGAGGTTATGAGGATATGGATGGAGTTGTGCGTTAATGGAGGAAGGGAAATTGAAGAAGATGAAAGGAGTTTGTTGGAGAAGAGAGACCTTATGATCAAGAAGAAGGCCATCGAGATGGATCTAAGTAAGACTATGCCATTGCAATTCGGAGAAGAAGTTGCAGATAGAGTTCTTCGAGTTATTAGAAGTGCTTTCAAAACTGCTTGA

mRNA sequence

ATGATAGCAAGTTGGCTGCACTTGAAGCAACCGCAGGGCGGCGCGTTCAACATAACCAACATCGCAGGCTACTTGAAAACCACAAACGACATTCCTCATTTCCAGTTTGAGTTGGTGCAGTGCAGCCCTACTTTTCTCATCTTCTTCCTCGACCTGATCCCTCGAACTGACATCGTCCTCAGCCCCGACTACCTTGCCACCTACTACGAGGAGACTGGGCTTGAACAGCACCGGCAACGGCTCGCTGTGCTGCCTGAAGTAAGCCCTTACTTCTCGTCGTCGCTCTACTTTCGGAAAGTTGTTTCGTCGACGGGAATTCTAGTGAGTGTCAAGTGTGAGGAGAGCGAGTCCAGGCGTGTGGAGGAGATTGTTCGTGACCAAATCAGTCCAATCTCGAAAGAGGTTATGAGGATATGGATGGAGTTGTGCGTTAATGGAGGAAGGGAAATTGAAGAAGATGAAAGGAGTTTGTTGGAGAAGAGAGACCTTATGATCAAGAAGAAGGCCATCGAGATGGATCTAAGTAAGACTATGCCATTGCAATTCGGAGAAGAAGTTGCAGATAGAGTTCTTCGAGTTATTAGAAGTGCTTTCAAAACTGCTTGA

Coding sequence (CDS)

ATGATAGCAAGTTGGCTGCACTTGAAGCAACCGCAGGGCGGCGCGTTCAACATAACCAACATCGCAGGCTACTTGAAAACCACAAACGACATTCCTCATTTCCAGTTTGAGTTGGTGCAGTGCAGCCCTACTTTTCTCATCTTCTTCCTCGACCTGATCCCTCGAACTGACATCGTCCTCAGCCCCGACTACCTTGCCACCTACTACGAGGAGACTGGGCTTGAACAGCACCGGCAACGGCTCGCTGTGCTGCCTGAAGTAAGCCCTTACTTCTCGTCGTCGCTCTACTTTCGGAAAGTTGTTTCGTCGACGGGAATTCTAGTGAGTGTCAAGTGTGAGGAGAGCGAGTCCAGGCGTGTGGAGGAGATTGTTCGTGACCAAATCAGTCCAATCTCGAAAGAGGTTATGAGGATATGGATGGAGTTGTGCGTTAATGGAGGAAGGGAAATTGAAGAAGATGAAAGGAGTTTGTTGGAGAAGAGAGACCTTATGATCAAGAAGAAGGCCATCGAGATGGATCTAAGTAAGACTATGCCATTGCAATTCGGAGAAGAAGTTGCAGATAGAGTTCTTCGAGTTATTAGAAGTGCTTTCAAAACTGCTTGA

Protein sequence

MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVLSPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRVEEIVRDQISPISKEVMRIWMELCVNGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMPLQFGEEVADRVLRVIRSAFKTA

Homology

[Close]

BLAST of Lag0008540 vs. NCBI nr
Match: CAJ80768.1 (red chlorophyll catabolite reductase, partial [Citrullus lanatus])

HSP 1 Score: 367.5 bits (942), Expect = 7.5e-98
Identity = 182/201 (90.55%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           MIASWLHL+QPQGGAFNITNIAGYLK +NDIPHFQFELVQCSPTFLIFFLDL+PRTDIVL
Sbjct: 114 MIASWLHLEQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIVL 173

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            PDYL TYYEETGLE+HRQ+LA LPEVSPYFSSSLYFRKVVSSTGILVSVKCEES+S RV
Sbjct: 174 RPDYLVTYYEETGLEKHRQQLAALPEVSPYFSSSLYFRKVVSSTGILVSVKCEESKSERV 233

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMPL 180
           EEIVR++I PISKEVMRIWMELC+NGGREIEE+ERSL+EKRDLMIKKKAIEMDLSKTMPL
Sbjct: 234 EEIVREEIGPISKEVMRIWMELCMNGGREIEEEERSLMEKRDLMIKKKAIEMDLSKTMPL 293

Query: 181 QFGEEVADRVLRVIRSAFKTA 202
           QFGEEVA+RVL+VIRSAFKTA
Sbjct: 294 QFGEEVANRVLQVIRSAFKTA 314

[Close]

BLAST of Lag0008540 vs. NCBI nr
Match: KAA0045840.1 (red chlorophyll catabolite reductase-like [Cucumis melo var. makuwa] >TYJ99443.1 red chlorophyll catabolite reductase-like [Cucumis melo var. makuwa])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 177/201 (88.06%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           MIASWLHLKQPQGGAF+ITNIAGY+K +NDIPHFQFELVQCSPTFLIFFLDL+PRTDI+L
Sbjct: 1   MIASWLHLKQPQGGAFDITNIAGYMKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL 60

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            PDYL TYYEETGLE+ RQRLA LPEVSPYFSSSLYFRKVVSSTGILV VKCEESES+RV
Sbjct: 61  HPDYLTTYYEETGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCEESESKRV 120

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMPL 180
           EEIVR++I PISKEVMRIWMELC++GGRE+EEDERSL+EKRDLMIK+KAIEMDLSK+MPL
Sbjct: 121 EEIVREEIGPISKEVMRIWMELCLSGGRELEEDERSLMEKRDLMIKRKAIEMDLSKSMPL 180

Query: 181 QFGEEVADRVLRVIRSAFKTA 202
           QFGEEVA+RVL+VIRSAFKTA
Sbjct: 181 QFGEEVANRVLQVIRSAFKTA 201

[Close]

BLAST of Lag0008540 vs. NCBI nr
Match: XP_008457850.1 (PREDICTED: red chlorophyll catabolite reductase-like [Cucumis melo])

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 177/201 (88.06%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           MIASWLHLKQPQGGAF+ITNIAGY+K +NDIPHFQFELVQCSPTFLIFFLDL+PRTDI+L
Sbjct: 124 MIASWLHLKQPQGGAFDITNIAGYMKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL 183

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            PDYL TYYEETGLE+ RQRLA LPEVSPYFSSSLYFRKVVSSTGILV VKCEESES+RV
Sbjct: 184 HPDYLTTYYEETGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCEESESKRV 243

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMPL 180
           EEIVR++I PISKEVMRIWMELC++GGRE+EEDERSL+EKRDLMIK+KAIEMDLSK+MPL
Sbjct: 244 EEIVREEIGPISKEVMRIWMELCLSGGRELEEDERSLMEKRDLMIKRKAIEMDLSKSMPL 303

Query: 181 QFGEEVADRVLRVIRSAFKTA 202
           QFGEEVA+RVL+VIRSAFKTA
Sbjct: 304 QFGEEVANRVLQVIRSAFKTA 324

[Close]

BLAST of Lag0008540 vs. NCBI nr
Match: XP_004148023.1 (red chlorophyll catabolite reductase [Cucumis sativus] >KGN61994.1 hypothetical protein Csa_006337 [Cucumis sativus])

HSP 1 Score: 358.6 bits (919), Expect = 3.5e-95
Identity = 178/202 (88.12%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           MIASWLHLKQPQGGAFNITNIAGYLK +NDIPHFQFELVQCSPTFLIFFLDL+PRTDI+L
Sbjct: 121 MIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL 180

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            PDYL TYYE+TGLE+ RQRLA LPEVSPYFSSSLYFRKVVSSTGILV VKC+ESES+RV
Sbjct: 181 RPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRV 240

Query: 121 EEIVRDQISPISKEVMRIWMELCV-NGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMP 180
           EEI++++I PISKEVMRIWMELC+ NGGRE+EEDERSL+EKRDLMIKKKAIEMDLSKTMP
Sbjct: 241 EEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMP 300

Query: 181 LQFGEEVADRVLRVIRSAFKTA 202
           LQFGEEVA+RVL+VIRSAFKTA
Sbjct: 301 LQFGEEVANRVLQVIRSAFKTA 322

[Close]

BLAST of Lag0008540 vs. NCBI nr
Match: XP_038902559.1 (red chlorophyll catabolite reductase-like [Benincasa hispida])

HSP 1 Score: 351.7 bits (901), Expect = 4.3e-93
Identity = 174/201 (86.57%), Postives = 190/201 (94.53%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           MIASWLHLKQPQGGAFNITNIAGY+K +N+IPHFQFELVQCSPTFLIFFLDL+PRTDIVL
Sbjct: 123 MIASWLHLKQPQGGAFNITNIAGYMKPSNNIPHFQFELVQCSPTFLIFFLDLLPRTDIVL 182

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            PDYL TYYEET LE+HRQ+LA LP VSPYFSSSLYFRKV+SST ILVSVKCEESES RV
Sbjct: 183 HPDYLVTYYEETELEKHRQQLAALPVVSPYFSSSLYFRKVISSTAILVSVKCEESESERV 242

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMPL 180
           EEI+R++I PISKEVM+IW+EL +NGGR+IEEDERSL+EKRDLMIKKKAIEMDLSKTMPL
Sbjct: 243 EEIIREEIGPISKEVMKIWIELWLNGGRDIEEDERSLMEKRDLMIKKKAIEMDLSKTMPL 302

Query: 181 QFGEEVADRVLRVIRSAFKTA 202
           QFGEEVA+RVLRVIRSAFK A
Sbjct: 303 QFGEEVANRVLRVIRSAFKIA 323

[Close]

BLAST of Lag0008540 vs. ExPASy Swiss-Prot
Match: Q8LDU4 (Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RCCR PE=1 SV=2)

HSP 1 Score: 180.6 bits (457), Expect = 1.7e-44
Identity = 91/201 (45.27%), Postives = 130/201 (64.68%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           +I SW+H K P G + NIT+I+G+L ++   P+F  EL+Q S   L+  LDL  R D+VL
Sbjct: 118 VIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKDLVL 177

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
           +PDYL  YY++T L+ HRQ L  LPEV+PY S SL+ R   S T  ++ +  EE +  ++
Sbjct: 178 NPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAEEED--KL 237

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGRE---IEEDERSLLEKRDLMIKKKAIEMDLSKT 180
           EEI+RD +SP +KEV+ +W+E CV    E   + E+ER  LE+RD   ++K+IE DL   
Sbjct: 238 EEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSIEDDLDLQ 297

Query: 181 MPLQFGEEVADRVLRVIRSAF 199
            P  FGEEV+ RV+  I+ AF
Sbjct: 298 FPRMFGEEVSSRVVHAIKEAF 316

[Close]

BLAST of Lag0008540 vs. ExPASy Swiss-Prot
Match: Q338P6 (Red chlorophyll catabolite reductase 1, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=RCCR1 PE=2 SV=1)

HSP 1 Score: 167.9 bits (424), Expect = 1.1e-40
Identity = 81/198 (40.91%), Postives = 128/198 (64.65%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           M+ S LH K P  GA +IT++  +L  + D PHF  E +Q SPT ++  LDL+PR D+ L
Sbjct: 128 MLQSSLHCKVP-NGAIDITSLLIFLNASTDAPHFLMEFIQGSPTSIVVLLDLLPRKDLAL 187

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            P+Y+  YYE T +++ R+++  LP+  PY S SL+ R   S T IL+S+ C +     +
Sbjct: 188 HPEYIERYYENTQVDKQREKVEELPQARPYRSRSLFVRSTFSLTAILMSIDCGQGGEGTL 247

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMPL 180
           EEIVR Q++  ++ +++IW++ C +   E+EE ER  + KRD +++ K+IE+DL+  +P 
Sbjct: 248 EEIVRGQLATAARALLQIWLDSCADHTSEMEEGERENMIKRDQIVRSKSIEVDLTSNLPR 307

Query: 181 QFGEEVADRVLRVIRSAF 199
            FG +VADRV+  I+ AF
Sbjct: 308 MFGPDVADRVIAEIQKAF 324

[Close]

BLAST of Lag0008540 vs. ExPASy Swiss-Prot
Match: Q9MTQ6 (Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare OX=4513 GN=rccR PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.1e-38
Identity = 75/198 (37.88%), Postives = 122/198 (61.62%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           M+ S LH K P  GA +IT++   L  + D PHF  E +Q SPT ++  LDL+PR D+ L
Sbjct: 4   MLQSSLHCKVP-NGAIDITSLFINLNASTDAPHFIMEFIQGSPTSMVVLLDLLPRKDLAL 63

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            P+Y+  YYE+T +++ R+ +  LP+  PY S SL+ R   S T +  ++ C +     +
Sbjct: 64  HPEYIEKYYEDTEVDKQRKIIEQLPQARPYLSPSLFVRSAFSPTAVFFTIDCGKGGEGTL 123

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMPL 180
           EEIV   ++ + K +++IW++ C +   E+EE ER ++ KRD  ++ K+IE+DL+  +P 
Sbjct: 124 EEIVHGHLASVVKGILQIWLDTCASDASEMEEGEREIMVKRDRTVRSKSIEVDLTANLPR 183

Query: 181 QFGEEVADRVLRVIRSAF 199
            FG +V+ R++  IR AF
Sbjct: 184 MFGPDVSGRIIAEIRKAF 200

[Close]

BLAST of Lag0008540 vs. ExPASy TrEMBL
Match: Q1ELT6 (Red chlorophyll catabolite reductase (Fragment) OS=Citrullus lanatus OX=3654 GN=rccr PE=2 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.6e-98
Identity = 182/201 (90.55%), Postives = 195/201 (97.01%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           MIASWLHL+QPQGGAFNITNIAGYLK +NDIPHFQFELVQCSPTFLIFFLDL+PRTDIVL
Sbjct: 114 MIASWLHLEQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIVL 173

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            PDYL TYYEETGLE+HRQ+LA LPEVSPYFSSSLYFRKVVSSTGILVSVKCEES+S RV
Sbjct: 174 RPDYLVTYYEETGLEKHRQQLAALPEVSPYFSSSLYFRKVVSSTGILVSVKCEESKSERV 233

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMPL 180
           EEIVR++I PISKEVMRIWMELC+NGGREIEE+ERSL+EKRDLMIKKKAIEMDLSKTMPL
Sbjct: 234 EEIVREEIGPISKEVMRIWMELCMNGGREIEEEERSLMEKRDLMIKKKAIEMDLSKTMPL 293

Query: 181 QFGEEVADRVLRVIRSAFKTA 202
           QFGEEVA+RVL+VIRSAFKTA
Sbjct: 294 QFGEEVANRVLQVIRSAFKTA 314

[Close]

BLAST of Lag0008540 vs. ExPASy TrEMBL
Match: A0A5D3BJH9 (Red chlorophyll catabolite reductase-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold123G00020 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.8e-96
Identity = 177/201 (88.06%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           MIASWLHLKQPQGGAF+ITNIAGY+K +NDIPHFQFELVQCSPTFLIFFLDL+PRTDI+L
Sbjct: 1   MIASWLHLKQPQGGAFDITNIAGYMKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL 60

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            PDYL TYYEETGLE+ RQRLA LPEVSPYFSSSLYFRKVVSSTGILV VKCEESES+RV
Sbjct: 61  HPDYLTTYYEETGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCEESESKRV 120

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMPL 180
           EEIVR++I PISKEVMRIWMELC++GGRE+EEDERSL+EKRDLMIK+KAIEMDLSK+MPL
Sbjct: 121 EEIVREEIGPISKEVMRIWMELCLSGGRELEEDERSLMEKRDLMIKRKAIEMDLSKSMPL 180

Query: 181 QFGEEVADRVLRVIRSAFKTA 202
           QFGEEVA+RVL+VIRSAFKTA
Sbjct: 181 QFGEEVANRVLQVIRSAFKTA 201

[Close]

BLAST of Lag0008540 vs. ExPASy TrEMBL
Match: A0A1S3C7R3 (red chlorophyll catabolite reductase-like OS=Cucumis melo OX=3656 GN=LOC103497432 PE=4 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 5.8e-96
Identity = 177/201 (88.06%), Postives = 194/201 (96.52%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           MIASWLHLKQPQGGAF+ITNIAGY+K +NDIPHFQFELVQCSPTFLIFFLDL+PRTDI+L
Sbjct: 124 MIASWLHLKQPQGGAFDITNIAGYMKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL 183

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            PDYL TYYEETGLE+ RQRLA LPEVSPYFSSSLYFRKVVSSTGILV VKCEESES+RV
Sbjct: 184 HPDYLTTYYEETGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCEESESKRV 243

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMPL 180
           EEIVR++I PISKEVMRIWMELC++GGRE+EEDERSL+EKRDLMIK+KAIEMDLSK+MPL
Sbjct: 244 EEIVREEIGPISKEVMRIWMELCLSGGRELEEDERSLMEKRDLMIKRKAIEMDLSKSMPL 303

Query: 181 QFGEEVADRVLRVIRSAFKTA 202
           QFGEEVA+RVL+VIRSAFKTA
Sbjct: 304 QFGEEVANRVLQVIRSAFKTA 324

[Close]

BLAST of Lag0008540 vs. ExPASy TrEMBL
Match: A0A0A0LLX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285290 PE=4 SV=1)

HSP 1 Score: 358.6 bits (919), Expect = 1.7e-95
Identity = 178/202 (88.12%), Postives = 194/202 (96.04%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           MIASWLHLKQPQGGAFNITNIAGYLK +NDIPHFQFELVQCSPTFLIFFLDL+PRTDI+L
Sbjct: 121 MIASWLHLKQPQGGAFNITNIAGYLKPSNDIPHFQFELVQCSPTFLIFFLDLLPRTDIIL 180

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            PDYL TYYE+TGLE+ RQRLA LPEVSPYFSSSLYFRKVVSSTGILV VKC+ESES+RV
Sbjct: 181 RPDYLTTYYEDTGLEKLRQRLAALPEVSPYFSSSLYFRKVVSSTGILVGVKCQESESKRV 240

Query: 121 EEIVRDQISPISKEVMRIWMELCV-NGGREIEEDERSLLEKRDLMIKKKAIEMDLSKTMP 180
           EEI++++I PISKEVMRIWMELC+ NGGRE+EEDERSL+EKRDLMIKKKAIEMDLSKTMP
Sbjct: 241 EEIIQEEIGPISKEVMRIWMELCLNNGGRELEEDERSLMEKRDLMIKKKAIEMDLSKTMP 300

Query: 181 LQFGEEVADRVLRVIRSAFKTA 202
           LQFGEEVA+RVL+VIRSAFKTA
Sbjct: 301 LQFGEEVANRVLQVIRSAFKTA 322

[Close]

BLAST of Lag0008540 vs. ExPASy TrEMBL
Match: A0A6J1G694 (red chlorophyll catabolite reductase-like OS=Cucurbita moschata OX=3662 GN=LOC111451176 PE=4 SV=1)

HSP 1 Score: 351.7 bits (901), Expect = 2.1e-93
Identity = 178/202 (88.12%), Postives = 191/202 (94.55%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           MIASWLHLKQP GGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPR DIVL
Sbjct: 117 MIASWLHLKQPHGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRVDIVL 176

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
            PDYL T+YEET LE++R+RL  +PEVSPYFSSSL+FRKVVSSTGILVSVKCEESES RV
Sbjct: 177 HPDYLTTFYEETELEKYRRRLDSVPEVSPYFSSSLFFRKVVSSTGILVSVKCEESESGRV 236

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGREIEE-DERSLLEKRDLMIKKKAIEMDLSKTMP 180
           EEI+R++I PISKEV+RIWMELC NGGREIE+ +ERSLLEKRDLMIKKKAIEMDLSKTMP
Sbjct: 237 EEIIREEIGPISKEVLRIWMELCSNGGREIEDGNERSLLEKRDLMIKKKAIEMDLSKTMP 296

Query: 181 LQFGEEVADRVLRVIRSAFKTA 202
           LQFGEEVA+RVLRVIRSAFKTA
Sbjct: 297 LQFGEEVAERVLRVIRSAFKTA 318

[Close]

BLAST of Lag0008540 vs. TAIR 10
Match: AT4G37000.1 (accelerated cell death 2 (ACD2) )

HSP 1 Score: 180.6 bits (457), Expect = 1.2e-45
Identity = 91/201 (45.27%), Postives = 130/201 (64.68%), Query Frame = 0


Query: 1   MIASWLHLKQPQGGAFNITNIAGYLKTTNDIPHFQFELVQCSPTFLIFFLDLIPRTDIVL 60
           +I SW+H K P G + NIT+I+G+L ++   P+F  EL+Q S   L+  LDL  R D+VL
Sbjct: 118 VIGSWIHCKIPTGVSLNITSISGFLNSSTKAPNFVVELIQSSSKSLVLILDLPHRKDLVL 177

Query: 61  SPDYLATYYEETGLEQHRQRLAVLPEVSPYFSSSLYFRKVVSSTGILVSVKCEESESRRV 120
           +PDYL  YY++T L+ HRQ L  LPEV+PY S SL+ R   S T  ++ +  EE +  ++
Sbjct: 178 NPDYLKEYYQDTALDSHRQSLLKLPEVNPYVSPSLFVRSAFSPTASMLKIDAEEED--KL 237

Query: 121 EEIVRDQISPISKEVMRIWMELCVNGGRE---IEEDERSLLEKRDLMIKKKAIEMDLSKT 180
           EEI+RD +SP +KEV+ +W+E CV    E   + E+ER  LE+RD   ++K+IE DL   
Sbjct: 238 EEILRDHVSPAAKEVLEVWLERCVKEEEEKIVVGEEERMELERRDKSFRRKSIEDDLDLQ 297

Query: 181 MPLQFGEEVADRVLRVIRSAF 199
            P  FGEEV+ RV+  I+ AF
Sbjct: 298 FPRMFGEEVSSRVVHAIKEAF 316

The following BLAST results are available for this feature:

BLAST of Lag0008540 vs. NCBI nr


Match Name	E-value	Identity	Description
CAJ80768.1	7.5e-98	90.55	red chlorophyll catabolite reductase, partial [Citrullus lanatus]	[more]
KAA0045840.1	1.2e-95	88.06	red chlorophyll catabolite reductase-like [Cucumis melo var. makuwa] >TYJ99443.1...	[more]
XP_008457850.1	1.2e-95	88.06	PREDICTED: red chlorophyll catabolite reductase-like [Cucumis melo]	[more]
XP_004148023.1	3.5e-95	88.12	red chlorophyll catabolite reductase [Cucumis sativus] >KGN61994.1 hypothetical ...	[more]
XP_038902559.1	4.3e-93	86.57	red chlorophyll catabolite reductase-like [Benincasa hispida]	[more]

BLAST of Lag0008540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LDU4	1.7e-44	45.27	Red chlorophyll catabolite reductase, chloroplastic OS=Arabidopsis thaliana OX=3...	[more]
Q338P6	1.1e-40	40.91	Red chlorophyll catabolite reductase 1, chloroplastic OS=Oryza sativa subsp. jap...	[more]
Q9MTQ6	4.1e-38	37.88	Red chlorophyll catabolite reductase (Fragment) OS=Hordeum vulgare OX=4513 GN=rc...	[more]

BLAST of Lag0008540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
Q1ELT6	3.6e-98	90.55	Red chlorophyll catabolite reductase (Fragment) OS=Citrullus lanatus OX=3654 GN=...	[more]
A0A5D3BJH9	5.8e-96	88.06	Red chlorophyll catabolite reductase-like OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A1S3C7R3	5.8e-96	88.06	red chlorophyll catabolite reductase-like OS=Cucumis melo OX=3656 GN=LOC10349743...	[more]
A0A0A0LLX2	1.7e-95	88.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285290 PE=4 SV=1	[more]
A0A6J1G694	2.1e-93	88.12	red chlorophyll catabolite reductase-like OS=Cucurbita moschata OX=3662 GN=LOC11...	[more]

BLAST of Lag0008540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37000.1	1.2e-45	45.27	accelerated cell death 2 (ACD2)	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009439	Red chlorophyll catabolite reductase	PFAM	PF06405	RCC_reductase	coord: 1..195 e-value: 1.6E-73 score: 247.1
IPR009439	Red chlorophyll catabolite reductase	PANTHER	PTHR34685	RED CHLOROPHYLL CATABOLITE REDUCTASE, CHLOROPLASTIC	coord: 1..200
None	No IPR available	GENE3D	3.40.1500.20		coord: 1..200 e-value: 2.4E-72 score: 245.3
None	No IPR available	PANTHER	PTHR34685:SF3	RED CHLOROPHYLL CATABOLITE REDUCTASE-LIKE	coord: 1..200

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0008540.1	Lag0008540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015996	chlorophyll catabolic process
cellular_component	GO:0009507	chloroplast
molecular_function	GO:0051743	red chlorophyll catabolite reductase activity