Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGGCGAATCTTGTGACTACCCCTGCAGGTTACTCAGGTCACCCAATAAAATGGGGACTGGTCTAGCAGGAGTGCATCACTGAAGGCGAGTCTGATGACTACCCCTGCAGGTTACTTAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACTGGTCTAGCAGGAGTAATATCACTGCAAGCGAATTTGGTGACGACTGTTGCACAAAGCTTACACATTCAAGGAAGAAAGAAACAAATTGCAAAAAAAAAAAAAAAAAAAAAAAACCAAAAAAAAAACCAAAAAAAAAACGAAAATTAAAAAAAAATTAAAAAAAACGAAAAGTATAAAAAAAACGAAAATTTAAAAAATAAAAATAAAAATAAAAAACGAAAAGTATAAAAAAAAACGAAAATTAAAAAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAGTATCCTACTTGGATCCCTTCTTGAATGCTCTCTGCAATTGATGTGTGCTCTCCCCTACTGAGGTTCAGTCTTATTTATAGGGAGAGTTTTAAGTTCAAATCAAAAGTTTAGATAAAGATTTGACTCAAATGAAATCCTATCTCCTGTTCAAAATATTATGGGATAATCTTTATCTTTATCTTTATCTGAACCAACTTAATTAAATTGAAATTCTTAACAGATAAGTATTTCAATTCAAATCAATTTGGGAATTCAAATTTTATCTAAATAATTTTATTTGGGCATACTCCAAAGTTTTCTTCCAAATCAAAATTTGAGATTCAAACATCAAATTCTATTCAAAATGCAAGTTTGAATTTGGTAAAATTTTACCTCAAATTAAATTTTGGCCATAATCCAAATTCTATCCCAAATGGACCAGAGTCCAAACCTCAAGTTCTATTCCATTTGCAAGTTAAAATTGGGTAGGATTTTACCTCAAATCAAAATTTGGGTATAAACCAAAATTTTCCCAAACTTGAAATCAAAGTTTCCTGCCAAACAAGGAAAATCAAAATTTTGACCAAACCTCAAATTTTGATTAATTGGCAATAAAAGTGTGTCAAATAAAAAAAAAATCAAAATTTTGACCAAAATTCATATTTTGATTAAATTGACGCACCAAATGGAGTCAAAGTCAAGAACAAATACCTTGCATTTTAATTCCAAAATATATTTTTCGAGATTCACTCACACATAACTTGTGCCTAAATCTCGAAAAGGGGGCATTTGTTGAAGGAGAAATTTCGGCCAATCACAAGTTGCCACGTCATTAATATAAATTAATGATAAAATAAATTTGGGATCAGTTACACATTTACACGTGTGCCTAAATTAAATTAATAGACATTAAAAATCGGCAAATCAAAGAATGCCACTTGTCTATTAGTGATCCATCAGATAACATCAGCCAAGTTCAATCAGATTATGCCACGTGGCAATTGGACCCAAGCCCAAGCCCATATGAGGTCCATCAAACTCTATAAATAGAGGAGGCCACCATTCATTCTGGGGGATTCAGCCAGAGGCAGAGAGGGCAGAGTCCAGAGCATTCTCCCAAGATTAGCCGATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATCCAACAGATCATCAAGCCAACAGGCCGATCCAACAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATTCGACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAATCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAAGAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCAATCATCCAAGAAGATCAACAAGTTAACAGACCGATCATCCAAGAAGGTCAACAAGCCAACAGGCCGATCATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATCCGACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAAAAGATCAACAAACCAACAGGCTGATCATCCAAGAAGATCAACAAGTCAGCAAACCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCCAATCCAAGAGATCATTAAGCCGGCAGGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAACTCAACAACCGAACAGGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAGCTCAACAAACCAACCCAAGAAGATCAAGAAGCTAGAGACCAAAGTTTATATATTTAA
mRNA sequence
ATGAAGGCGAATCTTGTGACTACCCCTGCAGGTTACTTAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACTGGTCTAGCAGGAGTAATATCACTGCAAGCGAATTTGATCATCAAGCCAACAGGCCGATCCAACAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATTCGACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAATCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAAGAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCAATCATCCAAGAAGATCAACAAGTTAACAGACCGATCATCCAAGAAGGTCAACAAGCCAACAGGCCGATCATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATCCGACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAAAAGATCAACAAACCAACAGGCTGATCATCCAAGAAGATCAACAAGTCAGCAAACCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCCAATCCAAGAGATCATTAAGCCGGCAGGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAACTCAACAACCGAACAGGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAGCTCAACAAACCAACCCAAGAAGATCAAGAAGCTAGAGACCAAAGTTTATATATTTAA
Coding sequence (CDS)
ATGAAGGCGAATCTTGTGACTACCCCTGCAGGTTACTTAGATCACCCAATAAAATGGGGACTGGGTCTAGCAGGAGTGCATGAAGGCGAATCTGGTGACTACCCCTGCAGGTTACTCAGATCACCCAATGAAATAGGGGACTGGTCTAGCAGGAGTAATATCACTGCAAGCGAATTTGATCATCAAGCCAACAGGCCGATCCAACAGATCATCAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGCCGATTCGACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAATCAGCAGACCGATCATCAAACCGATCATCCGAGAAGATCAAGAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCAATCATCCAAGAAGATCAACAAGTTAACAGACCGATCATCCAAGAAGGTCAACAAGCCAACAGGCCGATCATCAAGAAGATCAACAAGTCAGCAGGCCGATCATCCAAGAGGATCAACAAGCTAACAAGTCGATCCGACAGATCATCAAGCCAATCGACCGATCAAGAAGATCAACAAGTCAGCAGACCGATCATCCAAAAAGATCAACAAACCAACAGGCTGATCATCCAAGAAGATCAACAAGTCAGCAAACCGATCATCAAACCGATCATCCGAGAAGATCAACAAGTCAGCAGACCGATCATCCAAGAAGATCAACAAGCCAACAGGCCGATCATCCAAGAAGATCAACAAGTCACAACAGGCCAATCCAAGAGATCATTAAGCCGGCAGGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAACTCAACAACCGAACAGGCCGATCATCCAAGAAGATCATCAAGCCAACAGGCCGATCCAAGAGATCATCAACCTAGCAAGCCGATCATCCAAGAAGCTCAACAAACCAACCCAAGAAGATCAAGAAGCTAGAGACCAAAGTTTATATATTTAA
Protein sequence
MKANLVTTPAGYLDHPIKWGLGLAGVHEGESGDYPCRLLRSPNEIGDWSSRSNITASEFDHQANRPIQQIIKSAGRSSKRINKLTSRFDRSSSQSTDQEDQQVSRPIIQEDQQANRPIIQEDQQISRPIIKPIIREDQEVSRPIIQEDQQANRPIIQEDQQVNRPIIQEGQQANRPIIKKINKSAGRSSKRINKLTSRSDRSSSQSTDQEDQQVSRPIIQKDQQTNRLIIQEDQQVSKPIIKPIIREDQQVSRPIIQEDQQANRPIIQEDQQVTTGQSKRSLSRQADHPRRSSSQQADPRDHQPSKPIIQETQQPNRPIIQEDHQANRPIQEIINLASRSSKKLNKPTQEDQEARDQSLYI
Homology
BLAST of Lag0008533 vs. NCBI nr
Match:
XP_032235109.1 (uncharacterized protein LOC5510132 [Nematostella vectensis])
HSP 1 Score: 82.8 bits (203), Expect = 6.6e-12
Identity = 81/270 (30.00%), Postives = 149/270 (55.19%), Query Frame = 0
Query: 79 KRINKLTSRFDRSSSQSTDQEDQQVSRPIIQEDQQANRPIIQEDQQISRPII-------K 138
+++++L + D+ SQ D+QVS+PI D+Q ++PI D+Q+S+PI +
Sbjct: 1485 EQVSQLIAVQDKQHSQPIAVPDEQVSQPIAVLDEQVSQPIAVVDEQVSQPITVQDEQVSQ 1544
Query: 139 PIIREDQEVSRPIIQEDQQANRPIIQEDQQVNRPIIQEGQQANRPII---KKINKSAGRS 198
PI D++VS+PI D+Q ++PI +D+QV++PI +Q ++PI +++++
Sbjct: 1545 PISVPDEQVSQPITVLDEQVSQPIAVQDEQVSQPIAVLDEQVSQPIAVLDEQVSQPLTVL 1604
Query: 199 SKRINKLTSRSDRSSSQSTDQEDQQVSRPIIQKDQQTNRLIIQEDQQVSKPII------- 258
+++++ S + SQ D+QVS I +D+ ++LI +D+Q S+PI
Sbjct: 1605 DEQVSQPISVPEEQVSQPITVPDEQVSLSIAVQDEHVSQLIAVQDKQDSQPIAVLDEQVS 1664
Query: 259 KPIIREDQQVSRPIIQEDQQANRPIIQEDQQVTTGQS--KRSLSRQADHPRRSSSQQADP 318
+PI D+QVS+PI D+Q ++P+ D+QV+ S + +S+ P S
Sbjct: 1665 QPIAVLDEQVSQPIAVLDEQVSKPLTVLDEQVSQPISVPEEQVSQPITVPDEQVSLSIAV 1724
Query: 319 RDHQPSKPIIQETQQPNRPIIQEDHQANRP 330
+D S+ I + +Q ++PI D Q ++P
Sbjct: 1725 QDEHVSQLIAVQDKQNSQPIAVPDEQVSQP 1754
BLAST of Lag0008533 vs. NCBI nr
Match:
XP_009050660.1 (hypothetical protein LOTGIDRAFT_142487 [Lottia gigantea] >ESO98663.1 hypothetical protein LOTGIDRAFT_142487 [Lottia gigantea])
HSP 1 Score: 67.0 bits (162), Expect = 3.8e-07
Identity = 51/183 (27.87%), Postives = 97/183 (53.01%), Query Frame = 0
Query: 103 VSRPIIQEDQQANRPIIQEDQQISRPII-------KPIIREDQEVSRPIIQEDQQANRPI 162
+SRP+I +RP+I+ ISRP+I +P+IR +SRP+I+ +RP+
Sbjct: 52 ISRPVIMVGSLISRPVIRVGSLISRPVIRVGSLISRPVIRVGSLISRPVIRVGSLISRPV 111
Query: 163 IQEDQQVNRPIIQEGQQANRPII---KKINKSAGRSSKRINKLTSRSDRSSSQSTDQEDQ 222
I+ ++RP+I+ G +RP+I I++ R I++ R + S+ +
Sbjct: 112 IRVGSLISRPVIRVGSLISRPVIMVGSLISRPVIRVGSLISRPVIRVESLISRHVIRVGS 171
Query: 223 QVSRPIIQKDQQTNRLIIQEDQQVSKPII-------KPIIREDQQVSRPIIQEDQQANRP 269
+SRP+I+ +R +I+ +SKP++ +P++R +SRP+++ +RP
Sbjct: 172 LISRPVIRVGSLISRTVIRVGSLISKPVVGVGSLISRPVVRVGSLISRPVVRVGSLISRP 231
BLAST of Lag0008533 vs. NCBI nr
Match:
EGW07046.1 (Nestin [Cricetulus griseus])
HSP 1 Score: 66.6 bits (161), Expect = 4.9e-07
Identity = 84/316 (26.58%), Postives = 159/316 (50.32%), Query Frame = 0
Query: 58 EFDHQANRPIQ----QIIKSAGRSSKRINKLTSRFDRSSSQSTDQEDQQVSRPIIQEDQQ 117
E D + RP++ + +KS + + +L + + S +S ++EDQ+ RP+ +E+ Q
Sbjct: 507 EEDQETYRPLEKENGEPLKSVEEEDQLVERLIEKEGQESLRSLEEEDQETYRPLEKEEDQ 566
Query: 118 ANRPII------------QEDQQISRPIIKPIIREDQEVSRPIIQEDQQANRPIIQEDQQ 177
+I +EDQ+ R + K EDQ V R I +E Q++ R + +E+Q+
Sbjct: 567 LVERLIEKEGQESLGSLEEEDQETYRSLEK---EEDQLVERLIEKEGQESLRFLEEEEQE 626
Query: 178 VNRPI-IQEGQQANRPIIKKIN---KSAGRSSKRINKLTSRSDRSSSQSTDQEDQQVSRP 237
RP+ +E Q+ RP+ K+ KS + + +L + + S S ++EDQ+ RP
Sbjct: 627 TYRPLEKEEDQETYRPLEKENGEPLKSVEEEVQLVERLIEKEGQESLGSLEEEDQETYRP 686
Query: 238 IIQKDQQTNRLIIQEDQQVSKPIIKPIIREDQQVSRPIIQEDQQANRPIIQEDQQVTTGQ 297
+ ++DQ+ RLI +E Q+ + + EDQ+ RP+ +EDQ+ R I +EDQ+
Sbjct: 687 LEKEDQKVERLIEKEGQE----SLGSLEEEDQETYRPLEKEDQKVERLIEKEDQE----- 746
Query: 298 SKRSLSRQADHPRRSSSQQADPRDHQPSKPIIQETQQPNRPIIQEDHQANRPIQEIINLA 354
SLS + + + + + D Q + +I++ Q + ++E+ Q I+ L
Sbjct: 747 ---SLS-CLEEEEQETYRPLEKEDDQKFERLIEKGDQESLTCLEEED------QRIVKLL 800
BLAST of Lag0008533 vs. NCBI nr
Match:
XP_037062656.1 (LOW QUALITY PROTEIN: nestin [Peromyscus leucopus])
HSP 1 Score: 65.9 bits (159), Expect = 8.4e-07
Identity = 78/311 (25.08%), Postives = 151/311 (48.55%), Query Frame = 0
Query: 79 KRINKLTSRFDRSSSQSTDQEDQQVSRPIIQEDQQANRPIIQEDQQISRPI-------IK 138
+R+ +L + S +S D+EDQ+ RP+ +E+Q+ + ++EDQ + R I ++
Sbjct: 675 QRVERLIEKECLESLRSLDKEDQEAYRPLEKENQELLK-FVEEDQMVERLIEKECLESLR 734
Query: 139 PIIREDQEVSRPIIQEDQQANRPIIQEDQQVNRPI---------IQEGQQANRPIIKK-- 198
P+ EDQE +P+ E+Q+ + + +EDQ V R I + E Q KK
Sbjct: 735 PLDEEDQETYKPLENENQEPLKSVEEEDQMVERLIEKECLESEALDEEXQETEDSRKKPE 794
Query: 199 INKSAGRSSKRINKLTSRSDRSSSQSTDQEDQQVSRPIIQKDQQTNRLIIQEDQQVSKPI 258
+ KS + + +L + S +S D+EDQ+ +P+ ++Q+ + + +EDQ V + I
Sbjct: 795 LLKSVEEEDQMVERLIEKECLESLKSLDEEDQETYKPLENENQELLKSVEEEDQMVERLI 854
Query: 259 -------IKPIIREDQQVSRPIIQEDQQANRPIIQEDQQVTTGQSKRSLSRQADHPRRSS 318
++ + EDQ+ RP+ +E+Q+ + + +EDQ V K L S
Sbjct: 855 EKECLESLRSLDEEDQETDRPLEKENQELLKSVEEEDQMVERLIEKECL---------ES 914
Query: 319 SQQADPRDHQPSKPIIQETQQPNRPIIQEDH-----QANRPIQEIINLASRSSKKLNKPT 360
+ D D + KP+ +E Q+ R + ++ +P++ +L + +++ KP
Sbjct: 915 LRSLDEEDQRTVKPLERENQESLRSFDENQETVISLESEKPLK---SLEAEEEQRIVKPL 972
BLAST of Lag0008533 vs. NCBI nr
Match:
XP_021830789.1 (uncharacterized protein LOC110770869 [Prunus avium])
HSP 1 Score: 64.7 bits (156), Expect = 1.9e-06
Identity = 58/189 (30.69%), Postives = 107/189 (56.61%), Query Frame = 0
Query: 98 QEDQQVSRPIIQEDQQANRPIIQEDQQISRPIIK-------PIIREDQEVSRPIIQEDQQ 157
+E + ++PII+E + +P+I+E Q ++P+I+ PIIRE ++PII+E +
Sbjct: 539 REQPRQAQPIIREQPRQAQPLIREQQLQAQPLIREQPRQAQPIIREQPRQAQPIIREQPR 598
Query: 158 ANRPIIQEDQQVNRPIIQEGQQANRPIIKKINKSAG---RSSKRINKLTSRSDRSSSQST 217
+PII+E + +PII+E + +PII++ + A R R + R +Q
Sbjct: 599 QAQPIIREQPRQAQPIIREQPRQAQPIIREQPRQAQPIIREQPRQAQPIIREQPRQAQPI 658
Query: 218 DQEDQQVSRPIIQKDQQTNRLIIQEDQQVSKPIIK-------PIIREDQQVSRPIIQEDQ 270
+E + ++PII++ + II+E + ++PII+ P+IRE Q ++P+I+E
Sbjct: 659 IREQPRQAQPIIREQPRQAHNIIREQPRQAQPIIREQPRQAQPLIREQQLQAQPLIREQP 718
BLAST of Lag0008533 vs. ExPASy Swiss-Prot
Match:
Q9Z1Q1 (Nestin (Fragments) OS=Mesocricetus auratus OX=10036 GN=NES PE=1 SV=2)
HSP 1 Score: 57.4 bits (137), Expect = 3.9e-07
Identity = 76/319 (23.82%), Postives = 153/319 (47.96%), Query Frame = 0
Query: 58 EFDHQANRPIQ----QIIKSAGRSSKRINKLTSRFDRSSSQSTDQEDQQVSRPIIQEDQQ 117
E D + +RP++ + +K + L + + S S ++EDQ+ RP+ +E+ Q
Sbjct: 516 EEDQETDRPLEKENGEPLKPVEEEDQLFETLIEKEGQESLSSPEEEDQETDRPLEKEEDQ 575
Query: 118 ANRPIIQEDQQISRPIIKPIIREDQEVSRPIIQEDQQANRPIIQEDQQVNRPIIQEGQQA 177
+++++ Q S + EDQE RP+ +E+ + +P+ +EDQ I +EGQ++
Sbjct: 576 LVERLVEKEGQES---LSSPEEEDQETDRPLEKENGEPLKPVEEEDQLFETLIEKEGQES 635
Query: 178 -----------NRPIIKKINKSAGRSSKRINKLTSRSDRSSSQSTDQEDQQVSRPIIQKD 237
+RP+ K+ + + +L + + S S ++EDQ+ RP+ +++
Sbjct: 636 LSSPEEEDQETDRPLEKE-------EDQLVERLVEKEGQESLSSPEEEDQETDRPLEKEE 695
Query: 238 QQTNRLIIQEDQQ--VSKPIIKPIIREDQQVSRPIIQEDQQANRPIIQEDQQVTTGQSKR 297
Q +I++ Q +S P EDQ+ RP+ +E+ Q +I+++ GQ
Sbjct: 696 DQLVETLIEKQGQECLSSP-----EEEDQETDRPLEKEEDQRVERLIEKE-----GQESL 755
Query: 298 SLSRQADHPRRSSSQQADPRDHQPSKPIIQETQQPNRPIIQEDHQANRPIQEIINLASRS 357
S + D + + + + + +P KP+ +E Q+ R I +ED ++ ++E R
Sbjct: 756 SSPEEED---QETYRLLEKENGEPLKPVEEEDQRVERLIEKEDQESLSSLKE---EDQRI 808
Query: 358 SKKLNKPTQEDQEARDQSL 360
K L + E + D++L
Sbjct: 816 VKTLERENWESLRSLDENL 808
BLAST of Lag0008533 vs. ExPASy TrEMBL
Match:
A0A6I9LBV9 (nestin isoform X1 OS=Peromyscus maniculatus bairdii OX=230844 GN=Nes PE=3 SV=1)
HSP 1 Score: 78.6 bits (192), Expect = 6.1e-11
Identity = 87/328 (26.52%), Postives = 160/328 (48.78%), Query Frame = 0
Query: 60 DHQANRPI----QQIIKSAGRSSKRINKLTSRFDRSSSQSTDQEDQQVSRPIIQEDQQAN 119
D +A RP+ Q+ +K + + +L + S +S D+EDQ+ RP+ E+Q+
Sbjct: 697 DQEAYRPLEKENQEPLKFVEEEDQMVERLIEKECLESLRSLDEEDQETYRPLENENQELL 756
Query: 120 RPIIQEDQQISRPI-------IKPIIREDQEVSRPIIQEDQQANRPIIQEDQQVN----- 179
+ + +EDQ + R I ++ + EDQE RP+ +E+Q+ + + +EDQ V
Sbjct: 757 KSVEEEDQMVERLIEKECLESLRSLDEEDQETYRPLEKENQELLKSVEEEDQMVERLIEK 816
Query: 180 ------RPIIQEGQQANRPIIK---KINKSAGRSSKRINKLTSRSDRSSSQSTDQEDQQV 239
R + +E Q+ RP+ K ++ KS + + KL + S +S D+EDQ+
Sbjct: 817 ECLESLRSLDEEDQETYRPLEKENQELLKSVEEEDQMVEKLIEKECLESLRSLDEEDQET 876
Query: 240 SRPIIQKDQQTNRLIIQEDQQVSKPI-------IKPIIREDQQVSRPIIQEDQQANRPII 299
RP+ +++Q+ + + +EDQ V + I ++ + EDQ+ RP+ +E+Q+ + +
Sbjct: 877 YRPLEKENQEPLKFVEEEDQMVERLIEKECLESLRSLDEEDQETDRPLEKENQELLKSVE 936
Query: 300 QEDQQVTTGQSKRSLSRQADHPRRSSSQQADPRDHQPSKPIIQETQQPNRPIIQEDHQAN 356
+EDQ V K L S + D D + KP+ +E Q+ R E+ +
Sbjct: 937 EEDQMVERLIEKECL---------ESLRSLDEEDQRTVKPLERENQESLRS-FDENQETV 996
BLAST of Lag0008533 vs. ExPASy TrEMBL
Match:
A0A3P8WWP0 (Uncharacterized protein OS=Cynoglossus semilaevis OX=244447 PE=4 SV=1)
HSP 1 Score: 77.0 bits (188), Expect = 1.8e-10
Identity = 77/239 (32.22%), Postives = 122/239 (51.05%), Query Frame = 0
Query: 101 QQVSRPIIQE---DQQANRPIIQEDQQISRPIIKPIIREDQEVSRPIIQEDQQ-ANRPII 160
QQ SRP+ Q QQ +RP++Q SRP+++P R + SRP+ Q QQ RP+
Sbjct: 3 QQPSRPVKQAPQIPQQPSRPVMQP----SRPVMQP-SRPVMQPSRPVKQPFQQPTRRPVK 62
Query: 161 QEDQQVNRPIIQEGQQANRPIIKKINKSAGRSSKRINKLTSRSDRSSSQSTDQEDQQVSR 220
Q QQ RP+ Q QQ RP+ K+ N ++ + ++ Q QQ +R
Sbjct: 63 QPSQQPTRPVKQPSQQPTRPV------------KQPNWPVKQAPQQPTRPVKQPSQQPTR 122
Query: 221 PIIQKDQQTNRLIIQEDQQVSKPI---IKPIIREDQQVSRPIIQEDQQANRPIIQEDQQV 280
P+ +Q N + Q QQ S+P+ +P+ + QQ +RP+ Q QQ +RP++Q + V
Sbjct: 123 PV----KQPNWPVKQAPQQPSRPVKQPSRPVKQPSQQPTRPVKQVPQQPSRPVMQPSRPV 182
Query: 281 TTGQSKRSLSRQADHPRRSSSQQADPRDHQPSKPIIQETQQPNRPIIQEDHQANRPIQE 333
+ +Q P + + QQ P QPS+P+ Q QP+RP+ Q + RP+++
Sbjct: 183 ---KQPNWPVKQPSRPVKQAPQQPTPPVKQPSRPVKQPPPQPSRPVKQPSRRPPRPVKQ 217
BLAST of Lag0008533 vs. ExPASy TrEMBL
Match:
A0A6J0D7N6 (nestin isoform X3 OS=Peromyscus maniculatus bairdii OX=230844 GN=Nes PE=3 SV=1)
HSP 1 Score: 75.9 bits (185), Expect = 3.9e-10
Identity = 82/305 (26.89%), Postives = 151/305 (49.51%), Query Frame = 0
Query: 79 KRINKLTSRFDRSSSQSTDQEDQQVSRPIIQEDQQANRPIIQEDQQISRPI-------IK 138
+R+ +L + S +S D+EDQ+ RP+ E+Q+ + + +EDQ + R I ++
Sbjct: 676 QRVERLIEKECLESLRSLDEEDQETYRPLENENQELLKSVEEEDQMVERLIEKECLESLR 735
Query: 139 PIIREDQEVSRPIIQEDQQANRPIIQEDQQVN-----------RPIIQEGQQANRPIIK- 198
+ EDQE RP+ +E+Q+ + + +EDQ V R + +E Q+ RP+ K
Sbjct: 736 SLDEEDQETYRPLEKENQELLKSVEEEDQMVERLIEKECLESLRSLDEEDQETYRPLEKE 795
Query: 199 --KINKSAGRSSKRINKLTSRSDRSSSQSTDQEDQQVSRPIIQKDQQTNRLIIQEDQQVS 258
++ KS + + KL + S +S D+EDQ+ RP+ +++Q+ + + +EDQ V
Sbjct: 796 NQELLKSVEEEDQMVEKLIEKECLESLRSLDEEDQETYRPLEKENQEPLKFVEEEDQMVE 855
Query: 259 KPI-------IKPIIREDQQVSRPIIQEDQQANRPIIQEDQQVTTGQSKRSLSRQADHPR 318
+ I ++ + EDQ+ RP+ +E+Q+ + + +EDQ V K L
Sbjct: 856 RLIEKECLESLRSLDEEDQETDRPLEKENQELLKSVEEEDQMVERLIEKECL-------- 915
Query: 319 RSSSQQADPRDHQPSKPIIQETQQPNRPIIQEDHQANRPIQEIINLASRSSKKLNKPTQE 356
S + D D + KP+ +E Q+ R E+ + P++ S+K K +E
Sbjct: 916 -ESLRSLDEEDQRTVKPLERENQESLRS-FDENQETVIPLE---------SEKPLKSLEE 961
BLAST of Lag0008533 vs. ExPASy TrEMBL
Match:
A0A6J0DBP6 (nestin isoform X2 OS=Peromyscus maniculatus bairdii OX=230844 GN=Nes PE=3 SV=1)
HSP 1 Score: 71.6 bits (174), Expect = 7.4e-09
Identity = 82/305 (26.89%), Postives = 151/305 (49.51%), Query Frame = 0
Query: 79 KRINKLTSRFDRSSSQSTDQEDQQVSRPIIQEDQQANRPIIQEDQQISRPI-------IK 138
+R+ +L + S +S D+EDQ+ RP+ +E+Q+ + + +EDQ + R I ++
Sbjct: 676 QRVERLIEKECLESLRSLDKEDQEAYRPLEKENQEPLKFVEEEDQMVERLIEKECLESLR 735
Query: 139 PIIREDQEVSRPIIQEDQQANRPIIQEDQQVN-----------RPIIQEGQQANRPIIK- 198
+ EDQE RP+ E+Q+ + + +EDQ V R + +E Q+ RP+ K
Sbjct: 736 SLDEEDQETYRPLENENQELLKSVEEEDQMVERLIEKECLESLRSLDEEDQETYRPLEKE 795
Query: 199 --KINKSAGRSSKRINKLTSRSDRSSSQSTDQEDQQVSRPIIQKDQQTNRLIIQEDQQVS 258
++ KS + + +L + S +S D+EDQ+ RP+ +++Q+ + + +EDQ V
Sbjct: 796 NQELLKSVEEEDQMVERLIEKECLESLRSLDEEDQETYRPLEKENQELLKSVEEEDQMVE 855
Query: 259 KPI-------IKPIIREDQQVSRPIIQEDQQANRPIIQEDQQVTTGQSKRSLSRQADHPR 318
K I ++ + EDQ+ RP+ +E+Q+ + + +EDQ V K L
Sbjct: 856 KLIEKECLESLRSLDEEDQETYRPLEKENQEPLKFVEEEDQMVERLIEKECL-------- 915
Query: 319 RSSSQQADPRDHQPSKPIIQETQQPNRPIIQEDHQANRPIQEIINLASRSSKKLNKPTQE 356
S + D D + KP+ +E Q+ R E+ + P++ S+K K +E
Sbjct: 916 -ESLRSLDEEDQRTVKPLERENQESLRS-FDENQETVIPLE---------SEKPLKSLEE 961
BLAST of Lag0008533 vs. ExPASy TrEMBL
Match:
A0A672YJK6 (Uncharacterized protein OS=Sphaeramia orbicularis OX=375764 PE=4 SV=1)
HSP 1 Score: 70.1 bits (170), Expect = 2.2e-08
Identity = 97/304 (31.91%), Postives = 152/304 (50.00%), Query Frame = 0
Query: 42 PNEIGDWSSRSNITASEFDHQANRPIQQIIKSAGRSSKRINKLTSRFDRSSSQSTDQEDQ 101
P ++ + + ++ E +Q NRPIQ R K+ + ++ ++++Q
Sbjct: 46 PIKMEEQNQQNRPIKMEEQNQQNRPIQM---EEQNQQNRPIKMEEQNQQNRPIQMEEQNQ 105
Query: 102 QVSRPIIQEDQ-QANRPIIQEDQ-QISRPIIKPIIREDQEVSRPIIQEDQ-QANRPIIQE 161
Q +RPI E+Q Q NRPI E+Q Q +RPI + E + +RPI E+Q Q NRPI E
Sbjct: 106 Q-NRPIKMEEQNQQNRPIKMEEQNQQNRPI---QMEEQNQQNRPIQMEEQNQQNRPIKME 165
Query: 162 DQ-QVNRPI-IQEGQQANRPIIKKINKSAGRSSKRINKLTSRSDRSSSQSTDQEDQQVSR 221
+Q Q NRPI ++E Q NRP + R K+ ++ ++ ++++QQ
Sbjct: 166 EQNQQNRPIQMEEQNQQNRP----MKMEEQNQQNRPIKMEEQNQQNQPIKMEEQNQQNRP 225
Query: 222 PIIQKDQQTNRLIIQEDQQVSKPIIKPIIREDQQVSRPIIQEDQ-QANRPIIQEDQQVTT 281
+++ Q NR I E+Q IK + E Q +RPI E+Q Q NRP+ E+Q
Sbjct: 226 RKMEEQNQQNRPIKMEEQNQQNRPIK--MEEQNQQNRPIKMEEQNQQNRPLKMEEQNQQN 285
Query: 282 GQSKRSLSRQADHPRRSSSQQADPR------DHQPSKPI-IQETQQPNRPI-IQEDHQAN 332
K Q + P + Q R +Q ++PI ++E Q NRPI ++E +Q N
Sbjct: 286 QPLKMEEQNQQNRPIKMEEQNQQNRPIQMEEQNQQNRPIKMEEQNQQNRPIKMEEQNQQN 336
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q9Z1Q1 | 3.9e-07 | 23.82 | Nestin (Fragments) OS=Mesocricetus auratus OX=10036 GN=NES PE=1 SV=2 | [more] |
Match Name | E-value | Identity | Description | |
A0A6I9LBV9 | 6.1e-11 | 26.52 | nestin isoform X1 OS=Peromyscus maniculatus bairdii OX=230844 GN=Nes PE=3 SV=1 | [more] |
A0A3P8WWP0 | 1.8e-10 | 32.22 | Uncharacterized protein OS=Cynoglossus semilaevis OX=244447 PE=4 SV=1 | [more] |
A0A6J0D7N6 | 3.9e-10 | 26.89 | nestin isoform X3 OS=Peromyscus maniculatus bairdii OX=230844 GN=Nes PE=3 SV=1 | [more] |
A0A6J0DBP6 | 7.4e-09 | 26.89 | nestin isoform X2 OS=Peromyscus maniculatus bairdii OX=230844 GN=Nes PE=3 SV=1 | [more] |
A0A672YJK6 | 2.2e-08 | 31.91 | Uncharacterized protein OS=Sphaeramia orbicularis OX=375764 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |