Lag0008503 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008503
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase Ty1/copia-type domain-containing protein
Locationchr9: 23832993 .. 23837928 (+)
RNA-Seq ExpressionLag0008503
SyntenyLag0008503
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGTAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAACTATCTATACGATCTTATCCCCAAAATGGTAGGCTTGTTGAGTCGACGATACTGGCCACTCTCACCCATGCAGATCAAAGGATAATCTCGCAACAGAAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGGTCATCTATGAAAAATAGTCAGTTTCTACTGTAAACGGCGTTATAAAGAAAAGTGACTTATTTCGTGGTCCTGTCTTATGCAAACTCATTGCATAGGACGCCCCCACTCGCATGTCTCCACATGAATGACTTAGGATCTCATCGTTTGTACTTAATACAAAGTGGGCCGCGTCCATAGTGTCCCCAGGATAAGGCACCCAACCGTATCCTTATACTTTAGACAATTTTGACTATAAACTTGAACTTTATCCTACGATATGTCTCTACATATAGTTCGAGTATTCATTTTATAGCCAAGGATCTTAGTTTATTGGATTTAGGTTAATCATACGCAATTTACATATTCAATAACATCTTTTACTGAATAACCTCAATAACGACTTTATTGAAAATAGAATATGTTTAATGATTTACAAACTACGAGTTTATAGGACATTAAACCCAACAGTTTAGTTATGACTCAGATCGATGGGTTTCCAGAGAAGGAATGCTGATCATTTCGTGTTCATAAAAAGGAAGCAAGAGGAAAAGTTCTCCTAGTGTACTTAGTTTAGAACTCGAAATTCACAAGTCAAATTATGATATTAGTCAGAAAGGCAGCTAGTAAGCAAGTCGAGTAAGACAACTATTATTAAGTCGAGCGAGCTTTCGCTAATACTAATCAAAGGCGAAAAGCTAAAGTAAGAATTCACATAGAGATGATAGGCGTTTATCTATCGTGGAGCTCGATAGTCTTCCTTAAAACCGCTACCGATTCTTGAACAAAAAGTTGTATGCTTGCGAATACCATTTCTGGTCGTGACGTGTTAATGAAATCCATCCCGTGAAAGAAAGTCTTGTTCATTCTTGGGGTGAATAAATATAAACTACTGCTACGGTCTCAAATGTCACTTCGGGATCAACCTCAATGAATTATGGAGTAATGGGCTTGGTATAGATCCGTAGCCCGCTCTGGGTCTTTAACCGAAACTGGGACAAGGTATGGAAAAGCTCGATCAACGTCCTCCTCTCCCGAAGTTCGAAATGTGGAGATACCTCGACCGTCACCTGTTAGCTCTGTTCGCCACGGGTTAGCGACGTAAAGTGCGAATAAAAGTTCATCAGGACATTTTCTTCGACAATTGAAATATCATCATCGTTCTCAAGCCTAGACTTTTTGGGGGTCATATGCAAAATCTCGCTAAGCTTCATTCTACAAGCATTCCTATTTGAATGAGTTTTTTAAAAAGGTATATGGATTCCAATCATAAAGAAAGGGAATTGATTATGCGATTGATGTGACGGAAGATTGAATTGGTACCAATGAACCAAGAACTGATGGAATTGATGATTTGAACAGGGTGCAGAAGAACAAAGAAAAAAGTATAAGCAGAGGCTTTTTCTAAACATAAAGGCTAGAAAGATAAAGGTAGAAATCGAGTTCCAAAAGGAATTGACTCCTCAGAGGGGGTAGGAGAACTAAGCTAAGTAAGAAAGTCTTTCTAGCGAGGGGAAAGCAGAGTTATAGCGATTGAACACTTTTCCTAAGGGTTATTCCTTAGATTTTGAATAGCCAAGGTCTTTGGGTCTAGGGCAATAAAGAGTTTCGATTGGTAATACATACGAGGCTTGGGTTTTTTTCCTCAACCGAAAATCTTGCCCGACCCCGAGCAGGGGCCTAATTCACGTACGTAAAGGGAAGGGTGGGTTAGGTCTTTCACTCTTTTTTTTGACGTCAATAGATGAGTGAAGCGAAGGGACGAGACACCGATAGGCACGAGAGGAGTTCCTTCCAGGAGAGCATGTAATTGAAGAAAATCAAAACCACATCAAGCTATGGGTGCAATCATTACATATGACTGGGCTATCGACCTGACCTTGTTGATTTTTCACAAAGCTTGGCTAAAAGCCTGATTTTCCTAAATATTGGCTAGCTCAGATAAACATTCCAACTATTCAAAGAAAGCGGTCCTGAGCGGATGATCTTCGGATTCCATAATAGCACGTCCAGCGGCTATTCAAATGGATCCGTTCCTACCCGCCCGCAACCCTTCTTGGGAATGGAATCTTATCGACTGGGTACTTTTAGACCAAAAAGATTTGAGCAACTTTCACTATGCGAGGGCTTTGGTCTGCTTCCTTCTTTTCTTTTGAATCACAGGAAATGATTCAATCTCGAACTGGGCCTGACTATTCAGTTGAAGTGAGAGTTGGTTCAACTATCGAGGATAGAAATTTTTAGGAATTTTGTCAAGACTGCCGTGTTTGCTAGTAAGTGAATCGGAACGCTAACGGCAAGGTGCCAACTAACCTTTGTCCCTGTCCCTCAATCAATCAATGGGGCAAGTCGAGGCATGTCTTCTTTCTTTCAAGCAAGAAAGAGTTAGCTTTTTTCTCTGAATGATGAGGAGAACAACGTCGAAAGGGTTGGACCTGACCTGCCTACAACCAAAGCGTTAGAAGCCCTTAATTAAGAAGACCTTTAGTAAATCTGGTGTGTTCCCTATCTTGATTCTTTCTTTGCTTCCGTCGCTCAGTGCATCCCCACTACTGCCCCTGACAAACTTTCTGTCTAACTGTCGAGATCTCTTGCTCGATTTGCTCGTTACTCGTTTAGCTTGGCAAGCAAGTAAGTAATTTTTCATCAGTGTTTCGTTTCTGGGCCAGGTGACCTAAGCTTGGGGATTTTTTTAGTTAGTAAGGGAGTAGGCAGGGGGGAGTCAAAGGGTGAGAATAGATTTAGTGAATTGTGGGAGTTTCTAAGGAAAGCTATCTTCTCAAAGTCAAATCTTAAAAGGATGGAGTTCCAGCAAAACCCTTTCTAAGGATTGGGACGGTAGTTCGGGAGTTCGCTCGAAAGAACTGGCGTACGAGGATCTTTCGATCACTCTGTTAGATGCAAGGCACGTCTTCATCAAGCTTTCGAACAAAGAAGATATGCACAAAAAACAAAGAGAAGTTTTCGATTGAGGGATTGGTGTTTAGGGTTTTCTGCTGGAGCCACGATTTTCGTCTCCGAAATGGTGATCCAATGCATGCGCCTATTTCGATATCGCGACCCCATCTGCCTATTATCTTCTTCTTTGAGTTTGCCTGTTTTCTATCGTCTCAACTTTCCGAATTGGCCTGACCTGAAGGTCCTACGAAGCTTGTCTCACGCCCCCTCTCACAATAAAGTTAGGGTTTTGTAGAAATCGGTCTGATCAAGGAAAACCTCCCAAATCGTGTTTTGATTGGATCAACGGTGTATGTATGGATCACTAGCAAGAAATCGTTTCTTTTTTCATACCTAAGTTCAGCACGCATTGCAGACGACAAGGTCATGCCCGTCACGAAGGCAAAGTGGCGAATAAGGAACTTGGTGTCAACCCGTCACCGAGAAAGTCCTATGTTCCAAGAACCAATGCTACCTAGCACCTACCACTGAAGTTAGCCTTCGTGATTCAGATGTTGATGTTGCTGACATGCAAACCATTGAAGATGGTCCACGAGGCGAAGAGCTTCAACCAGATAACAATCCCCAAGCTTCTGTTCTTCAACAACCAGAGTATTTAGCTATTGGAAAATTGCCTTCGGTTAACACAACCCCTAATACCGATGGTAGCTCTGCCTCATGGGGACAACAGGAAGAGGAAAGAGTTTGAAGAAATTTTGTTGATAATCATAACCCCCTACAAATCATGTACTGGATCCATCCGGCCCGGAATCCAATGAACTGATGGTTAGCCCTCTTTTTTTAGTGATTGCCATACAGAGACAAGTTCGCGCTTTTTCCTTAGAAGGAAGGTCCTCAAATCCTCTTCATTCCAATGATCATGATGAAGAATCCAATAGCTTCTCTCAGGACCCAGAATCATCGAGATTTGAGAAAGATTTTAAACAGAAGCCTCTGAACAAGGCCGACCTGAGTAAGAGCGCGACTACTAGGGCACAATCCAAACTTGGGGCTAAGCCCACCCCACTATATTTCCAAAATTTCCACAATTGCAATTGTTTGGAATGCAAGGGCCGTCAACAATGGCCCCACGTGTAGGCGTCTCGATGATCTTGCTCGGACCGGGCTTTAGTCTTTGGTTGTCATCCTGGAACCAATGGTTAGAAGGGCCAACTATGTATCGAAATGGAAGCGAAGATTGCGTATGGATGGATGAATGTCAAACATCTCGCTCGGATCAATCCCCTACCAATATCTTGGTCTTTTGGAGAGAAGATATCTTTGACCTGTCCATGATTGAAGCCAATTCCCAATTCATTTCTACCAATGCAAAGATCAAATCCTAAAATACTCAAGGTGCTCTCCTTACGTAAGTTAACAAAGTTAGGGAGATTTCTCTTTCCACAAAAGCAGCTAGCAAGGGTTCCAAACCTTAAGTGACTTAGTTAGTAAGTCAATTCGCCGGTATGGCGAAGCAAGGAAAGCGGCTAGAAAGACAAAGAGCTAATGATGACTAGCCTTAACAGGCGCGGGAGAGTCCTGATAACTGCCCAAAAGGTAGTTATTTAAGCCTCAATTCTATAAGGATTTGTGTGTCTTTTGTGCTCAAGAGGGTTGGTTTTAGATGGATATTACATGTTTTAACCCATTTGGAAGAATGGAAGCATTGGAAATTATTTTGTGCAGATTATGTTGTTGGGCGACTGGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAGAAACTGCCACATCATAGTTCGTTAGCCAACTTCATGAATCGACTTTTGTTGAGTTATTCTCGTGATAAAGGATCAAGGAGAGCCTTACACGTGTCCTAG

mRNA sequence

ATGTGTAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAACTATCTATACGATCTTATCCCCAAAATGGTAGGCTTGTTGAGTCGACGATACTGGCCACTCTCACCCATGCAGATCAAAGGATAATCTCGCAACAGAAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGAAAGGCAGCTAGTAAGCAAGTCGAGTAAGACAACTATTATTAAGTCGAGCGAGCTTTCGCTAATACTAATCAAAGGCGAAAAGCTAAAATCCGTAGCCCGCTCTGGGTCTTTAACCGAAACTGGGACAAGGTATGGAAAAGCTCGATCAACGTCCTCCTCTCCCGAAGTTCGAAATGTGGAGATACCTCGACCGTCACCTGTTAGCTCTGTTCGCCACGGTGCATCCCCACTACTGCCCCTGACAAACTTTCTGTCTAACTGTCGAGATCTCTTGCTCGATTTGCTCGTTACTCGTTTAGCTTGGCAAGCAAGGTTTTCTGCTGGAGCCACGATTTTCGTCTCCGAAATGGTGATCCAATGCATGCGCCTATTTCGATATCGCGACCCCATCTGCCTATTATCTTCTTCTTTGAGTTTGCCTGTTTTCTATCGTCTCAACTTTCCGAATTGGCCTGACCTGAAGAACCAATGCTACCTAGCACCTACCACTGAAGTTAGCCTTCGTGATTCAGATGTTGATGTTGCTGACATGCAAACCATTGAAGATGGTCCACGAGGCGAAGAGCTTCAACCAGATAACAATCCCCAAGCTTCTGTTCTTCAACAACCAGAGTATTTAGCTATTGGAAAATTGCCTTCGGTTAACACAACCCCTAATACCGATGTGATTGCCATACAGAGACAAGTTCGCGCTTTTTCCTTAGAAGGAAGGTCCTCAAATCCTCTTCATTCCAATGATCATGATGAAGAATCCAATAGCTTCTCTCAGGACCCAGAATCATCGAGATTTGAGAAAGATTTTAAACAGAAGCCTCTGAACAAGGCCGACCTGAATTATGTTGTTGGGCGACTGGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAGAAACTGCCACATCATAGTTCGTTAGCCAACTTCATGAATCGACTTTTGTTGAGTTATTCTCGTGATAAAGGATCAAGGAGAGCCTTACACGTGTCCTAG

Coding sequence (CDS)

ATGTGTAGGAGTGAATTCCGTCTTGCGAAACTATGTCCCCAACTATCTATACGATCTTATCCCCAAAATGGTAGGCTTGTTGAGTCGACGATACTGGCCACTCTCACCCATGCAGATCAAAGGATAATCTCGCAACAGAAGTTCATAGATAGCTCAGGATTAAGAACGAGTTACCTAGAAAGGCAGCTAGTAAGCAAGTCGAGTAAGACAACTATTATTAAGTCGAGCGAGCTTTCGCTAATACTAATCAAAGGCGAAAAGCTAAAATCCGTAGCCCGCTCTGGGTCTTTAACCGAAACTGGGACAAGGTATGGAAAAGCTCGATCAACGTCCTCCTCTCCCGAAGTTCGAAATGTGGAGATACCTCGACCGTCACCTGTTAGCTCTGTTCGCCACGGTGCATCCCCACTACTGCCCCTGACAAACTTTCTGTCTAACTGTCGAGATCTCTTGCTCGATTTGCTCGTTACTCGTTTAGCTTGGCAAGCAAGGTTTTCTGCTGGAGCCACGATTTTCGTCTCCGAAATGGTGATCCAATGCATGCGCCTATTTCGATATCGCGACCCCATCTGCCTATTATCTTCTTCTTTGAGTTTGCCTGTTTTCTATCGTCTCAACTTTCCGAATTGGCCTGACCTGAAGAACCAATGCTACCTAGCACCTACCACTGAAGTTAGCCTTCGTGATTCAGATGTTGATGTTGCTGACATGCAAACCATTGAAGATGGTCCACGAGGCGAAGAGCTTCAACCAGATAACAATCCCCAAGCTTCTGTTCTTCAACAACCAGAGTATTTAGCTATTGGAAAATTGCCTTCGGTTAACACAACCCCTAATACCGATGTGATTGCCATACAGAGACAAGTTCGCGCTTTTTCCTTAGAAGGAAGGTCCTCAAATCCTCTTCATTCCAATGATCATGATGAAGAATCCAATAGCTTCTCTCAGGACCCAGAATCATCGAGATTTGAGAAAGATTTTAAACAGAAGCCTCTGAACAAGGCCGACCTGAATTATGTTGTTGGGCGACTGGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAGAAACTGCCACATCATAGTTCGTTAGCCAACTTCATGAATCGACTTTTGTTGAGTTATTCTCGTGATAAAGGATCAAGGAGAGCCTTACACGTGTCCTAG

Protein sequence

MCRSEFRLAKLCPQLSIRSYPQNGRLVESTILATLTHADQRIISQQKFIDSSGLRTSYLERQLVSKSSKTTIIKSSELSLILIKGEKLKSVARSGSLTETGTRYGKARSTSSSPEVRNVEIPRPSPVSSVRHGASPLLPLTNFLSNCRDLLLDLLVTRLAWQARFSAGATIFVSEMVIQCMRLFRYRDPICLLSSSLSLPVFYRLNFPNWPDLKNQCYLAPTTEVSLRDSDVDVADMQTIEDGPRGEELQPDNNPQASVLQQPEYLAIGKLPSVNTTPNTDVIAIQRQVRAFSLEGRSSNPLHSNDHDEESNSFSQDPESSRFEKDFKQKPLNKADLNYVVGRLEGANSVLQQNWEQKLPHHSSLANFMNRLLLSYSRDKGSRRALHVS
Homology
[Close]
BLAST of Lag0008503 vs. NCBI nr
Match: KAF3452219.1 (hypothetical protein FNV43_RR08317 [Rhamnella rubrinervis])

HSP 1 Score: 85.9 bits (211), Expect = 8.5e-13
Identity = 43/49 (87.76%), Postives = 44/49 (89.80%), Query Frame = 0 

Query: 220 APTTEVSLRDSDVDVADMQTIEDGPRGEELQPDNNPQASVLQQPEYLAI 269
           APTTEVSLRDSDV  A MQTIEDGPRGEEL+PDNNPQA VLQQPE LAI
Sbjct: 83  APTTEVSLRDSDVAAAGMQTIEDGPRGEELEPDNNPQAPVLQQPESLAI 131

[Close]
BLAST of Lag0008503 vs. NCBI nr
Match: TYK04334.1 (hypothetical protein E5676_scaffold84043G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-12
Identity = 59/137 (43.07%), Postives = 72/137 (52.55%), Query Frame = 0 

Query: 162 QARFSAGATIFVSEMVIQCMRLF-RYRDPICL----------LSSSLSLPVFYRLNFPNW 221
           +ARFSAGA      MVIQCMRL  R   PI            +  +L  P       P  
Sbjct: 170 KARFSAGA---FRAMVIQCMRLLGRLHPPIVFFFFFAVSTFGIGLTLEGPTKLVSRPPLR 229

Query: 222 PDLKNQCYLAPTTEVS-------LRDSDVDVADMQTIEDGPRGEELQPDNNPQASVLQQP 281
             L  + +L  +  ++           +V  ADM+TI DGPRGEEL+PD NPQAS+LQ+P
Sbjct: 230 IKLGKKSFLFSSARIADEKVMPVTNAKNVAAADMETIFDGPRGEELEPDKNPQASLLQEP 289

[Close]
BLAST of Lag0008503 vs. NCBI nr
Match: KAA0059498.1 (hypothetical protein E6C27_scaffold48829G00010 [Cucumis melo var. makuwa])

HSP 1 Score: 85.5 bits (210), Expect = 1.1e-12
Identity = 59/137 (43.07%), Postives = 72/137 (52.55%), Query Frame = 0 

Query: 162 QARFSAGATIFVSEMVIQCMRLF-RYRDPICL----------LSSSLSLPVFYRLNFPNW 221
           +ARFSAGA      MVIQCMRL  R   PI            +  +L  P       P  
Sbjct: 100 KARFSAGA---FRAMVIQCMRLLGRLHPPIVFFFFFAVSTFGIGLTLEGPTKLVSRPPLR 159

Query: 222 PDLKNQCYLAPTTEVS-------LRDSDVDVADMQTIEDGPRGEELQPDNNPQASVLQQP 281
             L  + +L  +  ++           +V  ADM+TI DGPRGEEL+PD NPQAS+LQ+P
Sbjct: 160 IKLGKKSFLFSSARIADEKVMPVTNAKNVAAADMETIFDGPRGEELEPDKNPQASLLQEP 219

[Close]
BLAST of Lag0008503 vs. NCBI nr
Match: EEF27683.1 (conserved hypothetical protein [Ricinus communis])

HSP 1 Score: 80.9 bits (198), Expect = 2.7e-11
Identity = 45/79 (56.96%), Postives = 52/79 (65.82%), Query Frame = 0 

Query: 220 APTTEVSLRDSDVDVADMQTIEDGPRGEELQPDNNPQASVLQQPEYLAIGKLPSVNTTPN 279
           APT E       +  ADMQTIEDGPRGEEL+PDNNPQA VL++ EYLAIGK PSVN   N
Sbjct: 12  APTIET------MPAADMQTIEDGPRGEELEPDNNPQAPVLKKSEYLAIGKSPSVNAASN 71

Query: 280 TDVIAIQRQVRAFSLEGRS 299
           T   +  R  +   L GR+
Sbjct: 72  TGGSSPSRGQQEEELVGRN 84

[Close]
BLAST of Lag0008503 vs. NCBI nr
Match: KAF7117267.1 (hypothetical protein RHSIM_RhsimMtG0002400 [Rhododendron simsii] >KAF7117304.1 hypothetical protein RHSIM_RhsimMtG0000300 [Rhododendron simsii])

HSP 1 Score: 58.2 bits (139), Expect = 1.9e-04
Identity = 32/47 (68.09%), Postives = 35/47 (74.47%), Query Frame = 0 

Query: 227 LRDSDVDVADMQTIED----GPRGEELQPDNNPQASVLQQPEYLAIG 270
           LRDSD+  ADMQTI       PRGEEL+PDNNP A +LQQPE LAIG
Sbjct: 88  LRDSDLAAADMQTILKILFFTPRGEELEPDNNPPAPLLQQPESLAIG 134

[Close]
BLAST of Lag0008503 vs. ExPASy TrEMBL
Match: A0A5A7UWF6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold48829G00010 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.4e-13
Identity = 59/137 (43.07%), Postives = 72/137 (52.55%), Query Frame = 0 

Query: 162 QARFSAGATIFVSEMVIQCMRLF-RYRDPICL----------LSSSLSLPVFYRLNFPNW 221
           +ARFSAGA      MVIQCMRL  R   PI            +  +L  P       P  
Sbjct: 100 KARFSAGA---FRAMVIQCMRLLGRLHPPIVFFFFFAVSTFGIGLTLEGPTKLVSRPPLR 159

Query: 222 PDLKNQCYLAPTTEVS-------LRDSDVDVADMQTIEDGPRGEELQPDNNPQASVLQQP 281
             L  + +L  +  ++           +V  ADM+TI DGPRGEEL+PD NPQAS+LQ+P
Sbjct: 160 IKLGKKSFLFSSARIADEKVMPVTNAKNVAAADMETIFDGPRGEELEPDKNPQASLLQEP 219

[Close]
BLAST of Lag0008503 vs. ExPASy TrEMBL
Match: A0A5D3BZC3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84043G00010 PE=4 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 5.4e-13
Identity = 59/137 (43.07%), Postives = 72/137 (52.55%), Query Frame = 0 

Query: 162 QARFSAGATIFVSEMVIQCMRLF-RYRDPICL----------LSSSLSLPVFYRLNFPNW 221
           +ARFSAGA      MVIQCMRL  R   PI            +  +L  P       P  
Sbjct: 170 KARFSAGA---FRAMVIQCMRLLGRLHPPIVFFFFFAVSTFGIGLTLEGPTKLVSRPPLR 229

Query: 222 PDLKNQCYLAPTTEVS-------LRDSDVDVADMQTIEDGPRGEELQPDNNPQASVLQQP 281
             L  + +L  +  ++           +V  ADM+TI DGPRGEEL+PD NPQAS+LQ+P
Sbjct: 230 IKLGKKSFLFSSARIADEKVMPVTNAKNVAAADMETIFDGPRGEELEPDKNPQASLLQEP 289

[Close]
BLAST of Lag0008503 vs. ExPASy TrEMBL
Match: B9T8X8 (Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1985520 PE=4 SV=1)

HSP 1 Score: 80.9 bits (198), Expect = 1.3e-11
Identity = 45/79 (56.96%), Postives = 52/79 (65.82%), Query Frame = 0 

Query: 220 APTTEVSLRDSDVDVADMQTIEDGPRGEELQPDNNPQASVLQQPEYLAIGKLPSVNTTPN 279
           APT E       +  ADMQTIEDGPRGEEL+PDNNPQA VL++ EYLAIGK PSVN   N
Sbjct: 12  APTIET------MPAADMQTIEDGPRGEELEPDNNPQAPVLKKSEYLAIGKSPSVNAASN 71

Query: 280 TDVIAIQRQVRAFSLEGRS 299
           T   +  R  +   L GR+
Sbjct: 72  TGGSSPSRGQQEEELVGRN 84

[Close]
BLAST of Lag0008503 vs. ExPASy TrEMBL
Match: A0A2N9GHF6 (Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS26895 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 4.2e-10
Identity = 39/44 (88.64%), Postives = 42/44 (95.45%), Query Frame = 0 

Query: 89  KSVARSGSLTETGTRYGKARSTSSSPEVRNVEIPRPSPVSSVRH 133
           +SVARSGSLTETGTR+GKARS SSSPEVRNVE+P PSPVSSVRH
Sbjct: 228 RSVARSGSLTETGTRHGKARSMSSSPEVRNVEVPFPSPVSSVRH 271

[Close]
BLAST of Lag0008503 vs. ExPASy TrEMBL
Match: A0A2N9FNJ2 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20199 PE=3 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 2.0e-04
Identity = 28/35 (80.00%), Postives = 30/35 (85.71%), Query Frame = 0 

Query: 231 DVDVADMQTIEDGPRGEELQPDNNPQASVLQQPEY 266
           +V  A MQTIEDGPRGEEL+ DNNPQA VLQQPEY
Sbjct: 309 NVAAAYMQTIEDGPRGEELELDNNPQAPVLQQPEY 343

The following BLAST results are available for this feature:
BLAST of Lag0008503 vs. NCBI nr
Match NameE-valueIdentityDescription
KAF3452219.18.5e-1387.76hypothetical protein FNV43_RR08317 [Rhamnella rubrinervis][more]
TYK04334.11.1e-1243.07hypothetical protein E5676_scaffold84043G00010 [Cucumis melo var. makuwa][more]
KAA0059498.11.1e-1243.07hypothetical protein E6C27_scaffold48829G00010 [Cucumis melo var. makuwa][more]
EEF27683.12.7e-1156.96conserved hypothetical protein [Ricinus communis][more]
KAF7117267.11.9e-0468.09hypothetical protein RHSIM_RhsimMtG0002400 [Rhododendron simsii] >KAF7117304.1 h... [more]
BLAST of Lag0008503 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Lag0008503 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A5A7UWF65.4e-1343.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A5D3BZC35.4e-1343.07Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
B9T8X81.3e-1156.96Uncharacterized protein OS=Ricinus communis OX=3988 GN=RCOM_1985520 PE=4 SV=1[more]
A0A2N9GHF64.2e-1088.64Reverse transcriptase Ty1/copia-type domain-containing protein OS=Fagus sylvatic... [more]
A0A2N9FNJ22.0e-0480.00Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20199 PE=3 SV=1[more]
BLAST of Lag0008503 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 301..328
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..118
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 101..127
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 297..328

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008503.1Lag0008503.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0110165 cellular anatomical entity