Lag0008463 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0008463
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Plant protein of unknown function (DUF639)
Location	chr9: 22364234 .. 22366880 (+)
RNA-Seq Expression	Lag0008463
Synteny	Lag0008463

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTCGGAAGCCTCACACCTCCATTGAAGATCTGCTCACTTGGCCTTAAGTTCCACCTGCGGATTCCCCTACTCTTCCCTCTTCTGCTTCTGCTCCCAAGTCTCATTAGGTACTTTCTAGATTTATATCTTTTCCTTTTTCTTCTTCTATTTTTTCTTTTTCGGCTTATTCTACTTGGTTTTGTTTCTTTGTAGCCCTCCGATGGGATCAGTATGGTCGTCTTTGGAAGCCAGGTCGAGAGCTTGAACAAAAGGTGAGATCTATGTCTGTTTCTGTTTGTTTCGAATCTTGACTATTGGATTCTTGTTCTTCTCAACAATTTGTGCTTCGATTTGTTTGCTGGTACCTGTTTGTGAATTGTGAGTTGTGAATTATATTGGACTCAAATGCTACTTTGTTGCGATAGTCTTTCCCTTTTGACATTGAGAATACTATTTTGTTTTCTCTCTTTCTCTCTCTCACTCACTTCAATTTATCGTTCTTTATGAGTTTTGTAGCGGTTTTTGACACTGTATGATTTTTTTCCTCTTCAAGCTTTGTTTTCTATTTAATTTTATGCCACTGATCTGCTTGTTTAGTTTGTAAATTGGCCAAATAATTCAAATTTCATACCTCGCTCTCTAACTTCTTCCTAAGTTGCTCTTTTCGCTCAAATGGTTATTAGGGAAGCAAAGCTTTTTTTATGAAGAACTTGAAGAAATTGAAAGGTCTCCTTCTGCTGAGAGGAATTGTATAAGTTTTTCATAGTATGTTCTGTTCTTCCAGTAGTCCTTGGTTGTTTTCAGTAAAAAGTCAGATGTTCTTTTATTCCTTTTTTGCTGTATGGTTAGTGGTTATTGATGTTTCTTTACAACTGTTACTTAGATGTCATTTATATTAGGCTAGTAAATTAGTGTTCAAGTATTTAAATGAATTGATATTCAATCCATTACCATGTCAAATTTGCAGAATCCTTGGTGTTTCTGCTAGCGAACCTCAAGAAAGTTTTAATGTGGTGGCAATTGATAGAAAAAAGGTTCCCTCAAATAATGCGAGAATTTCTGGAGTATTGCAGTTTCAGGGCACTTGCTCTATCTACACAAAATACAGTATTTAGCTGATAAAAAATTTCGACGCTTGACATTTGACATGTTGATAGCTTGGGAAGCCCCAGCAAGTTCTAGCCAACCTATACTTAATGTAAGTTTTTTGTTTTATGGGGTTTTCATGTCTGGACTCTAGATTTTTCAAATATAGATAGTTGAAATTGGAAAATGAATATAACTAGATCATTAAGATGCTTCTTTTGTAGTAATTCACTACGATTTTTTCAGACCTACCAAAATTATAAATTGCTTGTGTGTTTTTTGCATAATTATCAAGTGCTAAAATCAATGGCCTCAAACCTCTCAAAGGTTTAACTCTGCTTCCAATGACTTCCCTTTTATGTGAGATGACCCATCAGCAGGCAAGTTACTCTACCATGCTACTTCATATTTGTTGCAGATTCTTGTTGAATCATTTGGAGTATATGGTGCTCCAATTGGATAATTTCTTTAACAGATATGAGATATGCATGTTGTCTCATTTCTAAATTTTTATTTGATTTACCACAACGTACTGATTTCACTCCCCTAGTAAAAATGATTTCAGTTGGTGTATATGAAGACTCCATGTCCTTGTTGTTTTGAAATTATAAATTTTAATGTTTTCAATATTCATCTATAGCTAACCTTTATTACAGATTGCTATGGATGCATCAGTTGGGGTGGAGGCTTTTTCTCGAATTGTTCTAGCAGTTCCCATAATTTCAAATGTGATCATTAGTGAAAATCGTTTTGAGGTGCTTACTTGATCGACTGGTACTAGCTTCAGTTTTCTGTCTATGACAAGTATCTGAGCGCACTAGAAAAGTAGGCACCTTTAAATTTTTTCTATGTTATGTATAAAAGATTTAAATAGTGTGCATCAAAACTACTCTTTGTTAGTACTTTTAGTCTAATATTACATGTTCATTTTTTTAGAGTGATAAGAAAAATGAAAAACCTATCAGAGTCAAACCTCCTTCAGTCTGAAAGATCGTTAAGAGAAGAAAAGATTTAGAAGTGGATGGAATAGTCACCACACAACCAGTTCTTGAGCGTGTAGGAATTTCTACATGGTTGGGAGAGTCATGGAACGATTTCATTAACTTCTTATTTCCTATTATTGGTGCAAGTTTACCATCCCTTACTTATTATAGTCACAGGAAGTATACATCAGATAGTCTTTTGTAGATCTTACTACTAAATTTCTATTTTCACCTCTTTATTCTCTCATGTGTGCAGGTAGGTTGGTTCTGACAGTTCATGCACATTACTTTGAAGCTGCTAGCATGCAGGGGATCAAGATGTATGGCTTTTGGAATTGGGCAGAAGTTACTAGCATGTGGGGGCGAAGAGTAAAGAACAATGTGTAGAATATTATTCAAGTGTATATATGAACTCCCTATATTTTCCTCTACCGGTATGAGATTCTTAACAAGTTTAGTTCTCCGAGAACTTTGATTTTTCTATCAAGAGATTAACTTTGGATTTTTCTCAGGACATGTCTCATGTCGTTGGAAAAAATAGAAAGGAGCTCCTTGCTATGGCTAAAGGACATGGTGAAGACAAGAAAGGTTTGTGA

mRNA sequence

ATGTTCGGAAGCCTCACACCTCCATTGAAGATCTGCTCACTTGGCCTTAAGTTCCACCTGCGGATTCCCCTACTCTTCCCTCTTCTGCTTCTGCTCCCAAGTCTCATTAGCCCTCCGATGGGATCAGTATGGTCGTCTTTGGAAGCCAGAATCCTTGGTGTTTCTGCTAGCGAACCTCAAGAAAGTTTTAATGTGGTGGCAATTGATAGAAAAAAGTATTTAGCTGATAAAAAATTTCGACGCTTGACATTTGACATGTTGATAGCTTGGGAAGCCCCAGCAAGTTCTAGCCAACCTATACTTAATATTGCTATGGATGCATCAGTTGGGGTGGAGGCTTTTTCTCGAATTGTTCTAGCAGTTCCCATAATTTCAAATGTGATCATTAGTGAAAATCGTTTTGAGGACATGTCTCATGTCGTTGGAAAAAATAGAAAGGAGCTCCTTGCTATGGCTAAAGGACATGGTGAAGACAAGAAAGGTTTGTGA

Coding sequence (CDS)

ATGTTCGGAAGCCTCACACCTCCATTGAAGATCTGCTCACTTGGCCTTAAGTTCCACCTGCGGATTCCCCTACTCTTCCCTCTTCTGCTTCTGCTCCCAAGTCTCATTAGCCCTCCGATGGGATCAGTATGGTCGTCTTTGGAAGCCAGAATCCTTGGTGTTTCTGCTAGCGAACCTCAAGAAAGTTTTAATGTGGTGGCAATTGATAGAAAAAAGTATTTAGCTGATAAAAAATTTCGACGCTTGACATTTGACATGTTGATAGCTTGGGAAGCCCCAGCAAGTTCTAGCCAACCTATACTTAATATTGCTATGGATGCATCAGTTGGGGTGGAGGCTTTTTCTCGAATTGTTCTAGCAGTTCCCATAATTTCAAATGTGATCATTAGTGAAAATCGTTTTGAGGACATGTCTCATGTCGTTGGAAAAAATAGAAAGGAGCTCCTTGCTATGGCTAAAGGACATGGTGAAGACAAGAAAGGTTTGTGA

Protein sequence

MFGSLTPPLKICSLGLKFHLRIPLLFPLLLLLPSLISPPMGSVWSSLEARILGVSASEPQESFNVVAIDRKKYLADKKFRRLTFDMLIAWEAPASSSQPILNIAMDASVGVEAFSRIVLAVPIISNVIISENRFEDMSHVVGKNRKELLAMAKGHGEDKKGL

Homology

[Close]

BLAST of Lag0008463 vs. NCBI nr
Match: KAG6587653.1 (hypothetical protein SDJN03_16218, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-24
Identity = 76/120 (63.33%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 49  ARILGVSASEPQESFNVVAIDRKK--------------------------YLADKKFRRL 108
           ++ILGVSASE QESFNV AID  K                          YLADKKFRRL
Sbjct: 128 SKILGVSASELQESFNVEAIDSIKGSSNYARNFLEYCSFRALAVSTHNTGYLADKKFRRL 187

Query: 109 TFDMLIAWEAPASSSQPILNIAMDASVGVEAFSRIVLAVPIISNVIISENRFEDMSHVVG 143
           TFDM+IAWEAPASSSQP LNIA DASVGVEAFSRI  AVPIISNVIISEN FE ++   G
Sbjct: 188 TFDMMIAWEAPASSSQPELNIAEDASVGVEAFSRIAPAVPIISNVIISENIFEVLTTSAG 247

[Close]

BLAST of Lag0008463 vs. NCBI nr
Match: KAG7021615.1 (hypothetical protein SDJN02_15341, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 124.0 bits (310), Expect = 1.2e-24
Identity = 76/120 (63.33%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 49  ARILGVSASEPQESFNVVAIDRKK--------------------------YLADKKFRRL 108
           ++ILGVSASE QESFNV AID  K                          YLADKKFRRL
Sbjct: 129 SKILGVSASELQESFNVEAIDSIKGSSNYARNFLEYCSFRALAVSTHNTGYLADKKFRRL 188

Query: 109 TFDMLIAWEAPASSSQPILNIAMDASVGVEAFSRIVLAVPIISNVIISENRFEDMSHVVG 143
           TFDM+IAWEAPASSSQP LNIA DASVGVEAFSRI  AVPIISNVIISEN FE ++   G
Sbjct: 189 TFDMMIAWEAPASSSQPELNIAEDASVGVEAFSRIAPAVPIISNVIISENIFEVLTTSAG 248

[Close]

BLAST of Lag0008463 vs. NCBI nr
Match: XP_023007131.1 (uncharacterized protein LOC111499719 [Cucurbita maxima])

HSP 1 Score: 122.9 bits (307), Expect = 2.6e-24
Identity = 75/120 (62.50%), Postives = 81/120 (67.50%), Query Frame = 0


Query: 49  ARILGVSASEPQESFNVVAIDRKK--------------------------YLADKKFRRL 108
           ++ILGVSASE QESFNV AID  K                          YLADK+FRRL
Sbjct: 63  SKILGVSASELQESFNVEAIDSIKGSSNYARNFLEYCSFRALAVSTHNTGYLADKRFRRL 122

Query: 109 TFDMLIAWEAPASSSQPILNIAMDASVGVEAFSRIVLAVPIISNVIISENRFEDMSHVVG 143
           TFDM+IAWEAPASSSQP LNIA DASVGVEAFSRI  AVPIISNVIISEN FE ++   G
Sbjct: 123 TFDMMIAWEAPASSSQPELNIAEDASVGVEAFSRIAPAVPIISNVIISENIFEVLTTSAG 182

[Close]

BLAST of Lag0008463 vs. NCBI nr
Match: XP_023531055.1 (uncharacterized protein LOC111793424 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 120.6 bits (301), Expect = 1.3e-23
Identity = 76/130 (58.46%), Postives = 84/130 (64.62%), Query Frame = 0


Query: 39  PMGSVWSSLEARILGVSASEPQESFNVVAIDRKK-------------------------- 98
           P+ +V     ++ILGVSASE QESFNV AID  K                          
Sbjct: 53  PIANVVVRRCSKILGVSASELQESFNVEAIDSIKGSSNYARNFLEYCSFRALAVSTHNTG 112

Query: 99  YLADKKFRRLTFDMLIAWEAPASSSQPILNIAMDASVGVEAFSRIVLAVPIISNVIISEN 143
           YLADK+FRRLTFDM+IAWEAPASSS P LNIA DASVGVEAFSRI  AVPIISNVIISEN
Sbjct: 113 YLADKRFRRLTFDMMIAWEAPASSSLPELNIAEDASVGVEAFSRIAPAVPIISNVIISEN 172

[Close]

BLAST of Lag0008463 vs. NCBI nr
Match: XP_022933475.1 (uncharacterized protein LOC111440880 [Cucurbita moschata])

HSP 1 Score: 119.8 bits (299), Expect = 2.2e-23
Identity = 74/120 (61.67%), Postives = 80/120 (66.67%), Query Frame = 0


Query: 49  ARILGVSASEPQESFNVVAIDRKK--------------------------YLADKKFRRL 108
           ++ILGVSASE +ESFNV AID  K                          YLADKKFRRL
Sbjct: 63  SKILGVSASELKESFNVEAIDSIKGSSNYARNFLEYCSFRALAVSTHNTGYLADKKFRRL 122

Query: 109 TFDMLIAWEAPASSSQPILNIAMDASVGVEAFSRIVLAVPIISNVIISENRFEDMSHVVG 143
           TFDM+IAWEAPASSSQP LN A DASVGVEAFSRI  AVPIISNVIISEN FE ++   G
Sbjct: 123 TFDMMIAWEAPASSSQPELNNAEDASVGVEAFSRIAPAVPIISNVIISENIFEVLTTSAG 182

The following BLAST results are available for this feature:

BLAST of Lag0008463 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6587653.1	1.2e-24	63.33	hypothetical protein SDJN03_16218, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7021615.1	1.2e-24	63.33	hypothetical protein SDJN02_15341, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023007131.1	2.6e-24	62.50	uncharacterized protein LOC111499719 [Cucurbita maxima]	[more]
XP_023531055.1	1.3e-23	58.46	uncharacterized protein LOC111793424 [Cucurbita pepo subsp. pepo]	[more]
XP_022933475.1	2.2e-23	61.67	uncharacterized protein LOC111440880 [Cucurbita moschata]	[more]

BLAST of Lag0008463 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR31860	HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)-RELATED	coord: 68..142
None	No IPR available	PANTHER	PTHR31860:SF6	HEAT-INDUCIBLE TRANSCRIPTION REPRESSOR (DUF639)	coord: 68..142

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0008463.1	Lag0008463.1	mRNA