Lag0008384 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTAAGCATCCCTAAGAAGGAGGAAGACATAATTTATTGTTTCAACCCCAAGTTAACAACAAAAAGGACTTTATCAGAGTTTTTGACAAACGTCCACGCTGCTGATATTCAAAAGCACATGAGGACTAAAGGGGAAGAAGAAAACATATCGATGGATTATTTAATAAAGATCACTCAAGCCCACCTGGACGAGGATAAGGGCTTGACCTTATTTGCATTATGCAATCATGGAGCAGTGTTATTCCCTAAAGCAAAAGGATATGTCGATGGGAAAGTGACAAAACTGTTCTTTGACATAGAACGAGGAGCCAATCCGGTTATACCATTATTAGGAGAAACTTTTCGATCTCTCAACTACTGCAGAATAAGAGGTAAAGGAAAGTTGAATTGTTGTGTTCCGTTACTCTACATTTGGATACATAGTCATATCAAATGTCCGTTAGAGTTTAAATGCCCAAAGATAGATTTTAGTAACCCATGGAACTTGACACGAAATACAATCAGTGAGTTTGGTGTAGCAGTTTGGGATCCAACATGCCCAAAGAAGGAAGCATGGATGTTTTTCTTTTCAATAATTAAGTTTGAAAACATTAAATGGAAAGCTCCATGGATGTCCTTAAAGACCATGACATATAGATGTGGAGATTTCTATAGTGTGCCTTTGTTAGGGCCATGAGGAGGCATTAATTATGCACCTTTGTTAGTTTTACGACAGATGTGGTTTAAGCAGTTTATACCGGTTACTCACAATCTACAAGAATTAAAGTTTTCTTATGATCTCGAGGACTTCAGCCAGAAAAATGTCAGGCGGTCAATGAATGGAAATCTGTGAGGAAGGAGAAAAGTAAAGGGCATCATGAAGGGGTTACTGGTGAATATGAAGCTTGACAAATGAATAGAAGGAAGAGCATAACAAAGTTTATCCCAAAGGAGAAGAATGAGAAGCCATAAGAGCCAAAACACGGTCAGTTGAGTCAGTGGAGTGAAGAATGCAGAAGAATAGAAGAAAGAAATCGGTTATTAGAACAAGAGAATGAGAAGCTACGTAAAGAGACAACTCAATGGATGAATCATGCAACTCAAATACAAAAAGAACTTGATAAGACTAAAGGGTTATTGGAGAACCATAATGAGCTAGAGAATAGTTACAACACTTTGGACAAGGAGATGAGGCAGATGAATAAAGAAAATCGAAGTTTGAAAAATGAAAGAGCAGTATTACAAGAAGCATTGAAATCTCGAGAGGACTACATCAAAGATTTAGAAAATGGGAAGAGTTTGCTTGTGGAATTCATTAATGACTTAAATACATTGATTAGCAACCAGAACACACAAATAACAAAATTAGAGATGAATAATTATTCTTTGCGGGAAACTGTCGACACTTAACAAGCGAGAATGGTAGAGCACTCAAGAATATGGAGCACTGAGAAATTATGTCGAGTCTTTACACCACCAGCTCACTGTACACCAAAATTCAAGTGAAAGGATATTGCATAAGTATCAACAGTTGGAGACAAATTACAAAGAAATGAAAAATGATTATGATCTACAAGGAAGAAATTTTCATACGATCTTAGGGCATGTGGATCAAACCATTGAAATTCTTAGATTCGTTGCTAGAAGGGCTAATGGCTTCGCAGAATGGGCAGCTGAACTAAGTCAATATTTCTCCGATGCAACCTAATGCAAATGACTTGAATAGGTTTCTAAGGATGATATGCAAAGAACTTGGGCATCTTGGCTGTTTTCATTAATTGTTCATTTTTTGAATTTTGCATTTATGACAATAAAAATAATGTACATTGCACTTTCTCTTTGTAGTGTACCCTTTAGTTAAGAATTACTTTATTTTTATTTTCTCTCTTTTTATTTATTTATTTATATTATTATTTTTGTTTATTCATTATCTTTTCTCCTCTTTCTCTAAAAGGAATAAAAATAGCTCGCAACATTCCAATTCACCATCCCTACAATACAAGATCTAAAAGACGAATCATGGAAGACCAAGACAAGGATATGGAGAAAATGAAACAAGATATCAATAATCTCAGTGAACAAGTAGCGAAAATTCTAGAATTACTTTCAACTGGGAAATGAAAAGGGGTTGTAGAAGCAGCACAGACAAGCAATCCAATCCAAGAAATCGATGATCCTGCTTATCTACTAGGATTTACTCCTCAACATGTACGACAACGCCTGCATTTTCCACAACCACAAACCCCCCAACAATATGTTGCTTCGAATCCACTCTACACTCCTGTTCCAGATATGGAACAATTGGAAGTTCAAGCTGGAACTCAAATCAATAATATGACAATGTCTGGTCAACAATCGGAGATGAGACAACATGAGAGCGTTCAAGCTAAGGAAAAGTTGGAGGTTCTAGAAGAAAGGTTATGA ATGCTAAGCATCCCTAAGAAGGAGGAAGACATAATTTATTGTTTCAACCCCAAGTTAACAACAAAAAGGACTTTATCAGAGTTTTTGACAAACGTCCACGCTGCTGATATTCAAAAGCACATGAGGACTAAAGGGGAAGAAGAAAACATATCGATGGATTATTTAATAAAGATCACTCAAGCCCACCTGGACGAGGATAAGGGCTTGACCTTATTTGCATTATGCAATCATGGAGCAGTGTTATTCCCTAAAGCAAAAGGATATGTCGATGGGAAAGTGACAAAACTGTTCTTTGACATAGAACGAGGAGCCAATCCGGTTATACCATTATTAGGAGAAACTTTTCGATCTCTCAACTACTGCAGAATAAGAGAAAAATGTCAGGCGGTCAATGAATGGAAATCTGTGAGGAAGGAGAAAAGTAAAGGGCATCATGAAGGGGTTACTGGGGTTGTAGAAGCAGCACAGACAAGCAATCCAATCCAAGAAATCGATGATCCTGCTTATCTACTAGGATTTACTCCTCAACATGTACGACAACGCCTGCATTTTCCACAACCACAAACCCCCCAACAATATGTTGCTTCGAATCCACTCTACACTCCTGTTCCAGATATGGAACAATTGGAAGTTCAAGCTGGAACTCAAATCAATAATATGACAATGTCTGGTCAACAATCGGAGATGAGACAACATGAGAGCGTTCAAGCTAAGGAAAAGTTGGAGGTTCTAGAAGAAAGGTTATGA ATGCTAAGCATCCCTAAGAAGGAGGAAGACATAATTTATTGTTTCAACCCCAAGTTAACAACAAAAAGGACTTTATCAGAGTTTTTGACAAACGTCCACGCTGCTGATATTCAAAAGCACATGAGGACTAAAGGGGAAGAAGAAAACATATCGATGGATTATTTAATAAAGATCACTCAAGCCCACCTGGACGAGGATAAGGGCTTGACCTTATTTGCATTATGCAATCATGGAGCAGTGTTATTCCCTAAAGCAAAAGGATATGTCGATGGGAAAGTGACAAAACTGTTCTTTGACATAGAACGAGGAGCCAATCCGGTTATACCATTATTAGGAGAAACTTTTCGATCTCTCAACTACTGCAGAATAAGAGAAAAATGTCAGGCGGTCAATGAATGGAAATCTGTGAGGAAGGAGAAAAGTAAAGGGCATCATGAAGGGGTTACTGGGGTTGTAGAAGCAGCACAGACAAGCAATCCAATCCAAGAAATCGATGATCCTGCTTATCTACTAGGATTTACTCCTCAACATGTACGACAACGCCTGCATTTTCCACAACCACAAACCCCCCAACAATATGTTGCTTCGAATCCACTCTACACTCCTGTTCCAGATATGGAACAATTGGAAGTTCAAGCTGGAACTCAAATCAATAATATGACAATGTCTGGTCAACAATCGGAGATGAGACAACATGAGAGCGTTCAAGCTAAGGAAAAGTTGGAGGTTCTAGAAGAAAGGTTATGA MLSIPKKEEDIIYCFNPKLTTKRTLSEFLTNVHAADIQKHMRTKGEEENISMDYLIKITQAHLDEDKGLTLFALCNHGAVLFPKAKGYVDGKVTKLFFDIERGANPVIPLLGETFRSLNYCRIREKCQAVNEWKSVRKEKSKGHHEGVTGVVEAAQTSNPIQEIDDPAYLLGFTPQHVRQRLHFPQPQTPQQYVASNPLYTPVPDMEQLEVQAGTQINNMTMSGQQSEMRQHESVQAKEKLEVLEERL Homology
BLAST of Lag0008384 vs. NCBI nr
Match: KAA0060423.1 (uncharacterized protein E6C27_scaffold22G002420 [Cucumis melo var. makuwa]) HSP 1 Score: 193.0 bits (489), Expect = 3.1e-45 Identity = 87/122 (71.31%), Postives = 107/122 (87.70%), Query Frame = 0
BLAST of Lag0008384 vs. NCBI nr
Match: KAA0036941.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 188.3 bits (477), Expect = 7.7e-44 Identity = 85/122 (69.67%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Lag0008384 vs. NCBI nr
Match: KAA0036949.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 188.3 bits (477), Expect = 7.7e-44 Identity = 85/122 (69.67%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Lag0008384 vs. NCBI nr
Match: KAA0036933.1 (uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]) HSP 1 Score: 188.3 bits (477), Expect = 7.7e-44 Identity = 85/122 (69.67%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Lag0008384 vs. NCBI nr
Match: KAA0056623.1 (girdin-like [Cucumis melo var. makuwa]) HSP 1 Score: 167.2 bits (422), Expect = 1.8e-37 Identity = 77/122 (63.11%), Postives = 97/122 (79.51%), Query Frame = 0
BLAST of Lag0008384 vs. ExPASy TrEMBL
Match: A0A5A7UWQ6 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold22G002420 PE=4 SV=1) HSP 1 Score: 193.0 bits (489), Expect = 1.5e-45 Identity = 87/122 (71.31%), Postives = 107/122 (87.70%), Query Frame = 0
BLAST of Lag0008384 vs. ExPASy TrEMBL
Match: A0A5A7T6E2 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00290 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 3.7e-44 Identity = 85/122 (69.67%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Lag0008384 vs. ExPASy TrEMBL
Match: A0A5A7T5S7 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00170 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 3.7e-44 Identity = 85/122 (69.67%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Lag0008384 vs. ExPASy TrEMBL
Match: A0A5A7T1W2 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold86G00060 PE=4 SV=1) HSP 1 Score: 188.3 bits (477), Expect = 3.7e-44 Identity = 85/122 (69.67%), Postives = 104/122 (85.25%), Query Frame = 0
BLAST of Lag0008384 vs. ExPASy TrEMBL
Match: A0A5A7UL51 (Girdin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001430 PE=4 SV=1) HSP 1 Score: 167.2 bits (422), Expect = 8.9e-38 Identity = 77/122 (63.11%), Postives = 97/122 (79.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
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