Lag0008383 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0008383
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr9: 19729175 .. 19730125 (+)
RNA-Seq ExpressionLag0008383
SyntenyLag0008383
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATATTTTCTAAAATTGAGGACAAGAACAGAAGATCCTTCCTCAATGCTATTTTGGGAGTCAACTCTGTTGATAATCTGGGCAATTATCTTGGAGTCCCTTCGGAATTTTCCAAAAATAAATCAAAGGAGTTTGGCCCTATTTTGCACAAGATAGGGAAGGTCCTCAAAAGCTGGAAGAGATCTTTATTTTCAATGGCTGGAAAGGAAATCTTAATCAAAGCGGTTGGTCTGGCCATCCCATCATACATAATGAGCGTTTTTAAAATTCCTAAGGGGGTTTGTGAAGAGATCATGAGGAAATTTGCAAATTTTTGGTGGGGATCGTCTGCTGAGAAGAAAAAGTTGCACTGGTGCAGATGAGAAAAGTTGTGTTATCCAAAGAGCCTAGGAGGACTAAATTTCAGGGAGGTAGAAGGATTCAACCAAGCTCTAATTGCTAAGCAAGTGTGGAGGTTACTTGTTAATCTCAACTCGGTGGTAACAAGATTTCTTAAAAGCATATATTTCAAGGAGGGAGATGTGATGAATGCGGAGTTGGGGAGGAACCCATCCTATCTCTGGCGCAGCATCATGTGGGGTCGAGAACTTATTAAACAAGGAGCTAGATTCAGAGTGGGAAATGAAAAAAGCATATCCATGTTCCTTGATCCTTGGTTACCAAAGGAGTCTATTTTCAAGCCAAGATGCCTTCAGGAGTCAATGACTCAGGAGAAAGTGTCTCGGTTTATCCTACCAAATGGAGAATGGAATGTTGATTTACTGAAGGAGACAGTTGGGGAGGAAGACATTGAGTGCATCAGGGAAATCCCAATTAAACTTTCGGAGGAAGATAAATATATATGGCATTTCAATAAATGTGGTAATTACTCTGTAAAGAGTGGTTATACTGTATACATGAAGAATAAGATCAGGGCTGAATCAAGTGCAAATGCTATGTCTAAAGTCTAG

mRNA sequence

ATGATATTTTCTAAAATTGAGGACAAGAACAGAAGATCCTTCCTCAATGCTATTTTGGGAGTCAACTCTGTTGATAATCTGGGCAATTATCTTGGAGTCCCTTCGGAATTTTCCAAAAATAAATCAAAGGAGTTTGGCCCTATTTTGCACAAGATAGGGAAGGTCCTCAAAAGCTGGAAGAGATCTTTATTTTCAATGGCTGGAAAGGAAATCTTAATCAAAGCGGTTGGTCTGGCCATCCCATCATACATAATGAGCGTTTTTAAAATTCCTAAGGGGGTTTGTGAAGAGATCATGAGGAAATTTGCAAATTTTTGGTGGGGATCGTCTGCTGAGAAGAAAAAGTTGCACTGGGAGGTAGAAGGATTCAACCAAGCTCTAATTGCTAAGCAAGTGTGGAGGTTACTTGTTAATCTCAACTCGGTGGTAACAAGATTTCTTAAAAGCATATATTTCAAGGAGGGAGATGTGATGAATGCGGAGTTGGGGAGGAACCCATCCTATCTCTGGCGCAGCATCATGTGGGGTCGAGAACTTATTAAACAAGGAGCTAGATTCAGAGTGGGAAATGAAAAAAGCATATCCATGTTCCTTGATCCTTGGTTACCAAAGGAGTCTATTTTCAAGCCAAGATGCCTTCAGGAGTCAATGACTCAGGAGAAAGTGTCTCGGTTTATCCTACCAAATGGAGAATGGAATGTTGATTTACTGAAGGAGACAGTTGGGGAGGAAGACATTGAGTGCATCAGGGAAATCCCAATTAAACTTTCGGAGGAAGATAAATATATATGGCATTTCAATAAATGTGGTAATTACTCTGTAAAGAGTGGTTATACTGTATACATGAAGAATAAGATCAGGGCTGAATCAAGTGCAAATGCTATGTCTAAAGTCTAG

Coding sequence (CDS)

ATGATATTTTCTAAAATTGAGGACAAGAACAGAAGATCCTTCCTCAATGCTATTTTGGGAGTCAACTCTGTTGATAATCTGGGCAATTATCTTGGAGTCCCTTCGGAATTTTCCAAAAATAAATCAAAGGAGTTTGGCCCTATTTTGCACAAGATAGGGAAGGTCCTCAAAAGCTGGAAGAGATCTTTATTTTCAATGGCTGGAAAGGAAATCTTAATCAAAGCGGTTGGTCTGGCCATCCCATCATACATAATGAGCGTTTTTAAAATTCCTAAGGGGGTTTGTGAAGAGATCATGAGGAAATTTGCAAATTTTTGGTGGGGATCGTCTGCTGAGAAGAAAAAGTTGCACTGGGAGGTAGAAGGATTCAACCAAGCTCTAATTGCTAAGCAAGTGTGGAGGTTACTTGTTAATCTCAACTCGGTGGTAACAAGATTTCTTAAAAGCATATATTTCAAGGAGGGAGATGTGATGAATGCGGAGTTGGGGAGGAACCCATCCTATCTCTGGCGCAGCATCATGTGGGGTCGAGAACTTATTAAACAAGGAGCTAGATTCAGAGTGGGAAATGAAAAAAGCATATCCATGTTCCTTGATCCTTGGTTACCAAAGGAGTCTATTTTCAAGCCAAGATGCCTTCAGGAGTCAATGACTCAGGAGAAAGTGTCTCGGTTTATCCTACCAAATGGAGAATGGAATGTTGATTTACTGAAGGAGACAGTTGGGGAGGAAGACATTGAGTGCATCAGGGAAATCCCAATTAAACTTTCGGAGGAAGATAAATATATATGGCATTTCAATAAATGTGGTAATTACTCTGTAAAGAGTGGTTATACTGTATACATGAAGAATAAGATCAGGGCTGAATCAAGTGCAAATGCTATGTCTAAAGTCTAG

Protein sequence

MIFSKIEDKNRRSFLNAILGVNSVDNLGNYLGVPSEFSKNKSKEFGPILHKIGKVLKSWKRSLFSMAGKEILIKAVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHWEVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAELGRNPSYLWRSIMWGRELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESMTQEKVSRFILPNGEWNVDLLKETVGEEDIECIREIPIKLSEEDKYIWHFNKCGNYSVKSGYTVYMKNKIRAESSANAMSKV
Homology
BLAST of Lag0008383 vs. NCBI nr
Match: XP_006491472.1 (uncharacterized protein LOC102626455 [Citrus sinensis])

HSP 1 Score: 241.5 bits (615), Expect = 9.2e-60
Identity = 122/318 (38.36%), Postives = 186/318 (58.49%), Query Frame = 0

Query: 1    MIFSKIEDKNRRSFLNAILGVNSVDNLGNYLGVPSEFSKNKSKEFGPILHKIGKVLKSWK 60
            M FS      + S + +I  +  V     YLG+P    +NK   F  +  K+   + SW 
Sbjct: 815  MFFSGKASSEQISAIKSIFQLKVVPKYEKYLGLPPMLGRNKMSFFKEVKLKVTSKISSWH 874

Query: 61   RSLFSMAGKEILIKAVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW-- 120
              LFS  GKEILIKAV  A+P+Y MSVFK+PKG+CE+I ++ A FWWG+  +K  +HW  
Sbjct: 875  HKLFSAGGKEILIKAVAQAVPAYAMSVFKLPKGLCEDIQKEIARFWWGTKKDKHGIHWAR 934

Query: 121  ----------------EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAEL 180
                            ++  FNQAL+AKQ WRL+   NS++ R +K+ Y+K     NA++
Sbjct: 935  WDSMSKAKRRGGLGFRDLPSFNQALVAKQGWRLVRYPNSLMARVMKARYYKNSTFWNAKV 994

Query: 181  GRNPSYLWRSIMWGRELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESMTQEKV 240
            G NPS++WRSI+WG ++IK+G R+R+G+ K + ++ D W+P+ + F+P   +    +  V
Sbjct: 995  GSNPSFIWRSILWGSQVIKKGVRWRIGDGKKVLVYKDKWIPRPATFQPISPKTLPHETVV 1054

Query: 241  SRFILPNGEWNVDLLKETVGEEDIECIREIPIKL-SEEDKYIWHFNKCGNYSVKSGYTVY 299
            +  I    +W VD L++   +EDIE I +I +    EED+ +WHF+K G YSVKSGY + 
Sbjct: 1055 ADLIDSENKWRVDRLEQHFMKEDIEAILKILLPSGKEEDEVLWHFDKKGEYSVKSGYQLA 1114

BLAST of Lag0008383 vs. NCBI nr
Match: XP_024037590.1 (uncharacterized protein LOC112097210 [Citrus clementina])

HSP 1 Score: 239.6 bits (610), Expect = 3.5e-59
Identity = 120/312 (38.46%), Postives = 182/312 (58.33%), Query Frame = 0

Query: 1   MIFSKIEDKNRRSFLNAILGVNSVDNLGNYLGVPSEFSKNKSKEFGPILHKIGKVLKSWK 60
           M FSK    ++ + ++ I  +  V     YLG+PS   +     F  +  ++   + SW+
Sbjct: 520 MFFSKGTRNDQITAISEIFQLKVVSRHEKYLGLPSMIGRKTKSFFNEVKLRVLNKISSWQ 579

Query: 61  RSLFSMAGKEILIKAVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW-- 120
              F+  GKE+LIKAV  AIP+Y MSVFKIP G+CE+I +  A FWWG+  ++K +HW  
Sbjct: 580 HKFFTSGGKEVLIKAVAQAIPTYAMSVFKIPLGLCEDIQKAMARFWWGTKQDRKGIHWAR 639

Query: 121 ----------------EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAEL 180
                           ++  FNQAL+AKQ WR++   +S+V R LK+ YFK    MNA L
Sbjct: 640 WERISHSKARGGMGFRDLSSFNQALVAKQGWRIMQFPSSLVARVLKARYFKHTGFMNAGL 699

Query: 181 GRNPSYLWRSIMWGRELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESMTQEKV 240
           G  PS++WRSI+WGR+++ +GAR+R+GN +++ ++ + W+P+ + FKP       T   V
Sbjct: 700 GSKPSFVWRSIVWGRQVLHKGARWRIGNGQNVLVYGNNWIPRPTTFKPISAPSMGTDTTV 759

Query: 241 SRFILPNGEWNVDLLKETVGEEDIECIREIPI-KLSEEDKYIWHFNKCGNYSVKSGYTVY 294
           +  I    +W  DL+ +    ED E I +IP+ K  +ED+ IWH++K G YSVKSGY V 
Sbjct: 760 AELIDEKQQWREDLILQHFRPEDAEAIMQIPLPKRPKEDQLIWHYDKKGYYSVKSGYQVA 819

BLAST of Lag0008383 vs. NCBI nr
Match: XP_024950112.1 (uncharacterized protein LOC112496847 [Citrus sinensis])

HSP 1 Score: 235.7 bits (600), Expect = 5.1e-58
Identity = 119/307 (38.76%), Postives = 177/307 (57.65%), Query Frame = 0

Query: 9    KNRRSFLNAILGVNSVDNLGNYLGVPSEFSKNKSKEFGPILHKIGKVLKSWKRSLFSMAG 68
            +++R+ +  I  +N V     YLG+PS   + K   F  I  K+   +  W++   S  G
Sbjct: 764  EHQRAAIRGIFNLNVVSKHEKYLGLPSMIGRKKMGFFNDIKLKVLNKIAGWQQKFLSSGG 823

Query: 69   KEILIKAVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW---------- 128
            KE+LIKA   AIP+Y MSVFK+P+G C++I R  A FWWGS  +K+ +HW          
Sbjct: 824  KEVLIKAAAQAIPAYAMSVFKLPRGFCDDIQRAIAKFWWGSKGDKRGIHWRKWEKLSQAK 883

Query: 129  --------EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAELGRNPSYLW 188
                    E   FNQAL+AKQ WRLL   NS+V+R L++ YF+    + A+ G N SY+W
Sbjct: 884  IRGGLGFREFSCFNQALVAKQAWRLLQYPNSLVSRVLQARYFRNSSFLCAKAGANASYIW 943

Query: 189  RSIMWGRELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESMTQEKVSRFILPNG 248
            RSIMWGR++IK+G R+R+GN K I++F D WLP+   F+P           V+  I  + 
Sbjct: 944  RSIMWGRQVIKKGMRWRIGNGKKIAIFSDNWLPRPETFRPIFPLSLPVSSVVADLIKADN 1003

Query: 249  EWNVDLLKETVGEEDIECIREIPIKLSE-EDKYIWHFNKCGNYSVKSGYTVYMKNKIRAE 297
            +W+   L++   + D   I +IP+   + ED+ +WH++K GNYSVKSGY + +++K    
Sbjct: 1004 QWDEIKLRQHFLDVDTAEILKIPLPAEKAEDEVLWHYDKRGNYSVKSGYQLALRSKFPDS 1063

BLAST of Lag0008383 vs. NCBI nr
Match: XP_015388578.1 (uncharacterized protein LOC107178209 [Citrus sinensis])

HSP 1 Score: 234.6 bits (597), Expect = 1.1e-57
Identity = 110/297 (37.04%), Postives = 173/297 (58.25%), Query Frame = 0

Query: 1   MIFSKIEDKNRRSFLNAILGVNSVDNLGNYLGVPSEFSKNKSKEFGPILHKIGKVLKSWK 60
           M +S      + S +  I  +  +     YLG+PS   + K+  F  +  K+   + +W+
Sbjct: 315 MFYSGKLSAEQISAIKNIFQLKMLSKFEKYLGLPSMIGRKKTSFFNEVKLKLLSKISNWQ 374

Query: 61  RSLFSMAGKEILIKAVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW-- 120
              FS  GKE+LIKAV  A+P+Y MSVFKIP  +CE+I +  A FWWG+  EK  +HW  
Sbjct: 375 YKFFSSGGKEVLIKAVAQAVPAYAMSVFKIPSTLCEDIQKAMAKFWWGNKKEKHGIHWAS 434

Query: 121 ----------------EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAEL 180
                           ++  FNQAL+AKQ WR++ +  S++ R LK+ YFK    +NA++
Sbjct: 435 CERMSHAKHRGGLGFRDISSFNQALVAKQSWRIIQDSESLMARVLKARYFKHEGFLNAKI 494

Query: 181 GRNPSYLWRSIMWGRELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESMTQEKV 240
           G NPS++WRSI+WGR++I +G R+R+G+ + + ++   WLP+ + F+P   +      KV
Sbjct: 495 GTNPSFIWRSILWGRKIILKGTRWRIGSGEDVQVYNSNWLPRPTTFRPISPRTLAVDTKV 554

Query: 241 SRFILPNGEWNVDLLKETVGEEDIECIREIPI-KLSEEDKYIWHFNKCGNYSVKSGY 279
              I P  EW +DL+++   +ED + I+ IP+ + S  D+  WH++K G YS+KSGY
Sbjct: 555 VDLIGPEREWKMDLIRQYFVQEDADIIQRIPLPRSSARDELCWHYDKLGRYSIKSGY 611

BLAST of Lag0008383 vs. NCBI nr
Match: XP_022131662.1 (uncharacterized protein LOC111004787 [Momordica charantia])

HSP 1 Score: 234.2 bits (596), Expect = 1.5e-57
Identity = 113/240 (47.08%), Postives = 156/240 (65.00%), Query Frame = 0

Query: 56  LKSWKRSLFSMAGKEILIKAVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKK 115
           ++ WKRS FS+ GKE+LIK+VG AIP+Y MSVF++PKG CEE+ + FA FWWGSS + KK
Sbjct: 1   MQGWKRSFFSVGGKEVLIKSVGQAIPAYAMSVFRLPKGFCEEVSQMFARFWWGSSNDTKK 60

Query: 116 LHW------------------EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDV 175
           LHW                  ++EGFNQAL+AKQVWR+L N N +V+R LK+ YF +  V
Sbjct: 61  LHWMSWERMCLPKELGGLNFRDLEGFNQALVAKQVWRVLQNPNILVSRVLKAKYFHDSLV 120

Query: 176 MNAELGRNPSYLWRSIMWGRELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESM 235
           + A   RN SY W+  +WGR+L+ +G R RVGN  +I++F DPW+P+   F+P       
Sbjct: 121 LQATHLRNQSYFWKGFIWGRDLLIKGLRSRVGNGSTINIFSDPWIPRPYSFRPITAPFGP 180

Query: 236 TQEKVSRFILPNGEWNVDLLKETVGEEDIECIREIPIK-LSEEDKYIWHFNKCGNYSVKS 277
              KV+  I PNG+W+V L+     EED + I  +P+   +  D +IWHF+K G+Y+VKS
Sbjct: 181 YDVKVADLINPNGQWDVHLISYIFCEEDRDLILSMPVSPYNSVDSWIWHFDKRGHYNVKS 240

BLAST of Lag0008383 vs. ExPASy Swiss-Prot
Match: P93295 (Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 GN=AtMg00310 PE=4 SV=1)

HSP 1 Score: 103.6 bits (257), Expect = 3.9e-21
Identity = 49/152 (32.24%), Postives = 82/152 (53.95%), Query Frame = 0

Query: 78  LAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW------------------- 137
           +A+P Y MS F++ K +C+++      FWW S   K+K+ W                   
Sbjct: 1   MALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 60

Query: 138 EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAELGRNPSYLWRSIMWGRE 197
           ++  FNQAL+AKQ +R++   +++++R L+S YF    +M   +G  PSY WRSI+ GRE
Sbjct: 61  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRE 120

Query: 198 LIKQGARFRVGNEKSISMFLDPWLPKESIFKP 211
           L+ +G    +G+     ++LD W+  E+   P
Sbjct: 121 LLSRGLLRTIGDGIHTKVWLDRWIMDETPLPP 152

BLAST of Lag0008383 vs. ExPASy Swiss-Prot
Match: P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.8e-16
Identity = 68/275 (24.73%), Postives = 122/275 (44.36%), Query Frame = 0

Query: 45  FGPILHKIGKVLKSWKRSLFSMAGKEILIKAVGLAIPSYIMSVFKIPKGVCEEIMRKFAN 104
           FG IL ++   +  W+    S AG+  L KAV  ++P + MS   +P+ +   + +    
Sbjct: 13  FGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRT 72

Query: 105 FWWGSSAEKKKLH---WE---------------VEGFNQALIAKQVWRLLVNLNSVVTRF 164
           F WGS+AEKKK H   W                 +  N+ALI+K  WRLL   NS+ T  
Sbjct: 73  FLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVGWRLLQEKNSLWTLV 132

Query: 165 LKSIYFKEGDVMNAEL---GRNPSYLWRSIMWG-RELIKQGARFRVGNEKSISMFLDPWL 224
           L+  Y   G++ ++       + S  WRSI  G R+++  G  +  G+ + I  + D W+
Sbjct: 133 LQKKY-HVGEIRDSRWLIPKGSWSSTWRSIAIGLRDVVSHGVGWIPGDGQQIRFWTDRWV 192

Query: 225 PKESIFKPRCLQESMTQEKV--SRFILPNGEWNVDLLKETVGEEDIECIREIPIKL--SE 284
             + + +    +     + V      +P   W+   +           +R + + L    
Sbjct: 193 SGKPLLELDNGERPTDCDTVVAKDLWIPGRGWDFAKIDPYTTNNTRLELRAVVLDLVTGA 252

Query: 285 EDKYIWHFNKCGNYSVKSGYTVYMKNKIRAESSAN 294
            D+  W F++ G +SV+S Y +   +++   + A+
Sbjct: 253 RDRLSWKFSQDGQFSVRSAYEMLTVDEVPRPNMAS 286

BLAST of Lag0008383 vs. ExPASy TrEMBL
Match: A0A6J1BRN0 (uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004787 PE=4 SV=1)

HSP 1 Score: 234.2 bits (596), Expect = 7.1e-58
Identity = 113/240 (47.08%), Postives = 156/240 (65.00%), Query Frame = 0

Query: 56  LKSWKRSLFSMAGKEILIKAVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKK 115
           ++ WKRS FS+ GKE+LIK+VG AIP+Y MSVF++PKG CEE+ + FA FWWGSS + KK
Sbjct: 1   MQGWKRSFFSVGGKEVLIKSVGQAIPAYAMSVFRLPKGFCEEVSQMFARFWWGSSNDTKK 60

Query: 116 LHW------------------EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDV 175
           LHW                  ++EGFNQAL+AKQVWR+L N N +V+R LK+ YF +  V
Sbjct: 61  LHWMSWERMCLPKELGGLNFRDLEGFNQALVAKQVWRVLQNPNILVSRVLKAKYFHDSLV 120

Query: 176 MNAELGRNPSYLWRSIMWGRELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESM 235
           + A   RN SY W+  +WGR+L+ +G R RVGN  +I++F DPW+P+   F+P       
Sbjct: 121 LQATHLRNQSYFWKGFIWGRDLLIKGLRSRVGNGSTINIFSDPWIPRPYSFRPITAPFGP 180

Query: 236 TQEKVSRFILPNGEWNVDLLKETVGEEDIECIREIPIK-LSEEDKYIWHFNKCGNYSVKS 277
              KV+  I PNG+W+V L+     EED + I  +P+   +  D +IWHF+K G+Y+VKS
Sbjct: 181 YDVKVADLINPNGQWDVHLISYIFCEEDRDLILSMPVSPYNSVDSWIWHFDKRGHYNVKS 240

BLAST of Lag0008383 vs. ExPASy TrEMBL
Match: A0A6J0LQI7 (uncharacterized protein LOC108833114 OS=Raphanus sativus OX=3726 GN=LOC108833114 PE=4 SV=1)

HSP 1 Score: 230.3 bits (586), Expect = 1.0e-56
Identity = 117/295 (39.66%), Postives = 175/295 (59.32%), Query Frame = 0

Query: 4   SKIEDKNRRSFLNAILGVNSVDNLGNYLGVPSEFSKNKSKEFGPILHKIGKVLKSWKRSL 63
           SK+ D  +R  + ++LG+ +    G YLG+P +F + KS  F  I+ K+    + W +  
Sbjct: 553 SKVSDDVKRR-MRSLLGIQNEGGNGKYLGLPEQFGRKKSDIFRYIIDKVKAATQGWNKKF 612

Query: 64  FSMAGKEILIKAVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW----- 123
            S  GKE+L+KAV LA+P Y M+VF++PK  CEEI    A+FWW SS +KK +HW     
Sbjct: 613 LSHGGKEVLLKAVALAMPIYSMNVFRLPKNTCEEINSILAHFWW-SSGDKKGMHWYSWDR 672

Query: 124 -------------EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAELGRN 183
                        ++E FNQAL+ K VWR+L    S+++R L++ YF +G ++NA L + 
Sbjct: 673 LSVPKKEGGLGFRDLEKFNQALLGKHVWRILQQPQSLLSRLLQARYFPDGSILNASLKKK 732

Query: 184 PSYLWRSIMWGRELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESMTQEKVSRF 243
            SY W+S+++GR+L+K+G RF +GN  S+SM+ DPWLP      PR +  +   E V  +
Sbjct: 733 ASYAWKSLLFGRDLLKKGLRFIIGNGSSVSMWADPWLPTHPPRAPRAIANAEALESVRNY 792

Query: 244 ILPNGE-WNVDLLKETVGEEDIECIREIPI-KLSEEDKYIWHFNKCGNYSVKSGY 279
           I  +G  WN+D L+  V +ED+E I  + I   +E D   WH+   G Y+VKSGY
Sbjct: 793 IQADGTGWNLDKLRGKVVDEDVEIILRLKISSRAELDLLGWHYTDDGIYTVKSGY 845

BLAST of Lag0008383 vs. ExPASy TrEMBL
Match: A0A6J1DAR4 (uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018954 PE=4 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 5.1e-56
Identity = 121/304 (39.80%), Postives = 181/304 (59.54%), Query Frame = 0

Query: 13  SFLNAILGVNSVDNLGNYLGVPSEFSKNKSKEFGPILHKIGKVLKSWKRSLFSMAGKEIL 72
           S +  IL VN V+    YLG+P+   +N+   F  I  ++ K L+ WK  LFS+ GKE+L
Sbjct: 526 SLIQNILSVNMVECQLQYLGLPTFMPRNRRMHFNYIKDRVWKHLQGWKAKLFSIGGKEVL 585

Query: 73  IKAVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW-------------- 132
           IKAV  AIP Y MS F++PK +  E     A FWWGSS E KK+HW              
Sbjct: 586 IKAVAQAIPCYTMSCFRLPKRLIREFHHITARFWWGSSKEDKKIHWVAWNSLYLPKCEGG 645

Query: 133 ----EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAELGRNPSYLWRSIM 192
               ++E FN+AL+AKQ WR+L + NS+++R LK  YFK+   M A++  NPSY+WRSI+
Sbjct: 646 MGFRDLELFNKALLAKQCWRILNHPNSMLSRVLKGRYFKDCSFMEAKISGNPSYIWRSIL 705

Query: 193 WGRELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESMTQEKVSRFI-LPNGEWN 252
           WGR+L+K+G R+R+GN  S+ ++ D W+P +   K           +VS  +    G W 
Sbjct: 706 WGRDLLKKGLRWRIGNGDSVFIYGDNWVPNQPTLKILSSPRLPLVSRVSSLVDHEEGGWQ 765

Query: 253 VDLLKETVGEEDIECIREIPI-KLSEEDKYIWHFNKCGNYSVKSGYTVYMKNK--IRAES 295
            D++++    ++ + I  IPI + +EED+ IW++ K G YSV+SGY V + N   ++A S
Sbjct: 766 GDVVRDEFTPDEAKGILSIPIGRGAEEDRLIWNYEKTGVYSVRSGYKVALLNNPCVQAPS 825

BLAST of Lag0008383 vs. ExPASy TrEMBL
Match: M5W5F3 (Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=3760 GN=PRUPE_ppa026368mg PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 8.7e-56
Identity = 118/299 (39.46%), Postives = 173/299 (57.86%), Query Frame = 0

Query: 15  LNAILGVNSVDNLGNYLGVPSEFSKNKSKEFGPILHKIGKVLKSWKRSLFSMAGKEILIK 74
           +  +L V  V    NYLG+P+   K + + F  +  K+ K +  WK  L S AGKEILIK
Sbjct: 438 IEGVLNVPVVRCHENYLGLPTIAGKGRKQLFQHLKDKLWKHISGWKEKLLSRAGKEILIK 497

Query: 75  AVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW---------------- 134
           AV  AIP+Y MS F+IPKG+C+E+    A FWW  + +K+ +HW                
Sbjct: 498 AVLQAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLG 557

Query: 135 --EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAELGRNPSYLWRSIMWG 194
             ++E FNQAL+AKQ WR+L    S+V R  ++ Y      + AE+G NPS++WRS+ WG
Sbjct: 558 FRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWG 617

Query: 195 RELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESMTQEKVSRFILPNGEWNVDL 254
           +EL+ +G R+RVG+  SI ++ D WLP  S FK     +     +V      +G+WNV L
Sbjct: 618 KELLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPL 677

Query: 255 LKETVGEEDIECIREIPI-KLSEEDKYIWHFNKCGNYSVKSGYTV--YMKNKIRAESSA 293
           LK+   +++++ I +IP+  L+  D  IWH+ + G YSVKSGY +    K+K+  E SA
Sbjct: 678 LKDIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSGEPSA 736

BLAST of Lag0008383 vs. ExPASy TrEMBL
Match: A0A251NPF0 (Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRUPE_6G123900 PE=4 SV=1)

HSP 1 Score: 227.3 bits (578), Expect = 8.7e-56
Identity = 118/299 (39.46%), Postives = 173/299 (57.86%), Query Frame = 0

Query: 15  LNAILGVNSVDNLGNYLGVPSEFSKNKSKEFGPILHKIGKVLKSWKRSLFSMAGKEILIK 74
           +  +L V  V    NYLG+P+   K + + F  +  K+ K +  WK  L S AGKEILIK
Sbjct: 401 IEGVLNVPVVRCHENYLGLPTIAGKGRKQLFQHLKDKLWKHISGWKEKLLSRAGKEILIK 460

Query: 75  AVGLAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW---------------- 134
           AV  AIP+Y MS F+IPKG+C+E+    A FWW  + +K+ +HW                
Sbjct: 461 AVLQAIPTYSMSCFRIPKGLCKELNGIMARFWWAKAKDKRGIHWVKWELLCKSKFAGGLG 520

Query: 135 --EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAELGRNPSYLWRSIMWG 194
             ++E FNQAL+AKQ WR+L    S+V R  ++ Y      + AE+G NPS++WRS+ WG
Sbjct: 521 FRDLEAFNQALLAKQCWRILRTPESLVARIFRARYHPSVPFLEAEVGTNPSFIWRSLQWG 580

Query: 195 RELIKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESMTQEKVSRFILPNGEWNVDL 254
           +EL+ +G R+RVG+  SI ++ D WLP  S FK     +     +V      +G+WNV L
Sbjct: 581 KELLNKGLRWRVGSGVSIQVYTDKWLPAPSCFKIMSPPQLPLSTRVCDLFTSSGQWNVPL 640

Query: 255 LKETVGEEDIECIREIPI-KLSEEDKYIWHFNKCGNYSVKSGYTV--YMKNKIRAESSA 293
           LK+   +++++ I +IP+  L+  D  IWH+ + G YSVKSGY +    K+K+  E SA
Sbjct: 641 LKDIFWDQEVDAILQIPLASLAGHDCLIWHYERNGMYSVKSGYRLAGLEKDKMSGEPSA 699

BLAST of Lag0008383 vs. TAIR 10
Match: AT4G29090.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 7.1e-34
Identity = 84/248 (33.87%), Postives = 130/248 (52.42%), Query Frame = 0

Query: 78  LAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW------------------E 137
           +A+P+Y M+ F +PK VC++I+   A+FWW +  E K +HW                  +
Sbjct: 1   MALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKD 60

Query: 138 VEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAELGRNPSYLWRSIMWGREL 197
           +E FN AL+ KQ+WR+L    S++ +  KS YF + D +NA LG  PS++W+SI   +E+
Sbjct: 61  IEAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEI 120

Query: 198 IKQGARFRVGNEKSISMFLDPWLPKESIFKPRCLQESMTQE--------KVSRFILPNG- 257
           ++QGAR  VGN + I ++   WL  +       +Q    QE        KVS  I  +G 
Sbjct: 121 LRQGARAVVGNGEDIIIWRHKWLDSKPASAALRMQRVPPQEYASVSSILKVSDLIDESGR 180

Query: 258 EWNVDLLKETVGEEDIECIREI-PIKLSEEDKYIWHFNKCGNYSVKSGYTVYMKNKIRAE 298
           EW  D+++    E + + I E+ P      D Y W +   G+Y+VKSGY V +   I   
Sbjct: 181 EWRKDVIEMLFPEVERKLIGELRPGGRRILDSYTWDYTSSGDYTVKSGYWV-LTQIINKR 240

BLAST of Lag0008383 vs. TAIR 10
Match: ATMG00310.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 103.6 bits (257), Expect = 2.8e-22
Identity = 49/152 (32.24%), Postives = 82/152 (53.95%), Query Frame = 0

Query: 78  LAIPSYIMSVFKIPKGVCEEIMRKFANFWWGSSAEKKKLHW------------------- 137
           +A+P Y MS F++ K +C+++      FWW S   K+K+ W                   
Sbjct: 1   MALPVYAMSCFRLSKLLCKKLTSAMTEFWWSSCENKRKISWVAWQKLCKSKEDDGGLGFR 60

Query: 138 EVEGFNQALIAKQVWRLLVNLNSVVTRFLKSIYFKEGDVMNAELGRNPSYLWRSIMWGRE 197
           ++  FNQAL+AKQ +R++   +++++R L+S YF    +M   +G  PSY WRSI+ GRE
Sbjct: 61  DLGWFNQALLAKQSFRIIHQPHTLLSRLLRSRYFPHSSMMECSVGTRPSYAWRSIIHGRE 120

Query: 198 LIKQGARFRVGNEKSISMFLDPWLPKESIFKP 211
           L+ +G    +G+     ++LD W+  E+   P
Sbjct: 121 LLSRGLLRTIGDGIHTKVWLDRWIMDETPLPP 152

BLAST of Lag0008383 vs. TAIR 10
Match: AT3G09510.1 (Ribonuclease H-like superfamily protein )

HSP 1 Score: 68.2 bits (165), Expect = 1.3e-11
Identity = 38/136 (27.94%), Postives = 73/136 (53.68%), Query Frame = 0

Query: 147 LKSIYFKEGDVMNAELGRNPSYLWRSIMWGRELIKQGARFRVGNEKSISMFLDPWLPKES 206
           +K+ YFK+  +++A++ +  SY W S++ G  L+K+G R  +G+ ++I + LD  +    
Sbjct: 1   MKARYFKDVSILDAKVRKQQSYGWASLLDGIALLKKGTRHLIGDGQNIRIGLDNIVDSHP 60

Query: 207 IFKPRCLQESMTQEKVSRFILPNGE---WNVDLLKETVGEEDIECIREIPI-KLSEEDKY 266
             +P   +E+  +  ++      G    W+   + + V + D   I  I + K  + DK 
Sbjct: 61  P-RPLNTEETYKEMTINNLFERKGSYYFWDDSKISQFVDQSDHGFIHRIYLAKSKKPDKI 120

Query: 267 IWHFNKCGNYSVKSGY 279
           IW++N  G Y+V+SGY
Sbjct: 121 IWNYNTTGEYTVRSGY 135

BLAST of Lag0008383 vs. TAIR 10
Match: AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )

HSP 1 Score: 55.5 bits (132), Expect = 8.7e-08
Identity = 44/175 (25.14%), Postives = 77/175 (44.00%), Query Frame = 0

Query: 30  YLGVPSEFSKNKSKEFGPILHKIGKVLKSWKRSLFSMAGKEILIKAVGLAIPSYIMSVFK 89
           YLG+P    K  + ++GP++ KI   +  W     S AG+  LI +V  ++ ++ MS F+
Sbjct: 27  YLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSLTNFWMSAFR 86

Query: 90  IPKGVCEEIMRKFANFWWGS---SAEKKKLHWEVEGFNQALIAKQVWRLLVNLNSVVTRF 149
           +P    +EI    ++F W     + +K K+ W     +     K    L   + S+    
Sbjct: 87  LPSACIKEIDSICSSFLWSGPELNTKKAKVAW-----SDVCTPKDEGGL--GIRSLKEAN 146

Query: 150 LKSIYFKEGDVMNAELGRNPSYLWRSIMWGRELIKQGARFRVGNEKSISMFLDPW 202
             S +   G   N  LG   S++W+ I+  R L     +  + N  + S + D W
Sbjct: 147 KGSFWSISG---NTTLG---SWMWKKILKHRALASGFVKHDIHNGSNTSFWFDNW 188

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_006491472.19.2e-6038.36uncharacterized protein LOC102626455 [Citrus sinensis][more]
XP_024037590.13.5e-5938.46uncharacterized protein LOC112097210 [Citrus clementina][more]
XP_024950112.15.1e-5838.76uncharacterized protein LOC112496847 [Citrus sinensis][more]
XP_015388578.11.1e-5737.04uncharacterized protein LOC107178209 [Citrus sinensis][more]
XP_022131662.11.5e-5747.08uncharacterized protein LOC111004787 [Momordica charantia][more]
Match NameE-valueIdentityDescription
P932953.9e-2132.24Uncharacterized mitochondrial protein AtMg00310 OS=Arabidopsis thaliana OX=3702 ... [more]
P0C2F63.8e-1624.73Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... [more]
Match NameE-valueIdentityDescription
A0A6J1BRN07.1e-5847.08uncharacterized protein LOC111004787 OS=Momordica charantia OX=3673 GN=LOC111004... [more]
A0A6J0LQI71.0e-5639.66uncharacterized protein LOC108833114 OS=Raphanus sativus OX=3726 GN=LOC108833114... [more]
A0A6J1DAR45.1e-5639.80uncharacterized protein LOC111018954 OS=Momordica charantia OX=3673 GN=LOC111018... [more]
M5W5F38.7e-5639.46Reverse transcriptase domain-containing protein (Fragment) OS=Prunus persica OX=... [more]
A0A251NPF08.7e-5639.46Reverse transcriptase domain-containing protein OS=Prunus persica OX=3760 GN=PRU... [more]
Match NameE-valueIdentityDescription
AT4G29090.17.1e-3433.87Ribonuclease H-like superfamily protein [more]
ATMG00310.12.8e-2232.24RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
AT3G09510.11.3e-1127.94Ribonuclease H-like superfamily protein [more]
AT3G24255.18.7e-0825.14RNA-directed DNA polymerase (reverse transcriptase)-related family protein [more]
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33116REVERSE TRANSCRIPTASE ZINC-BINDING DOMAIN-CONTAINING PROTEIN-RELATED-RELATEDcoord: 11..283
NoneNo IPR availablePANTHERPTHR33116:SF41SUBFAMILY NOT NAMEDcoord: 11..283

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0008383.1Lag0008383.1mRNA