Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAAATCAATGCTCATCACTCGTCCTCCCAATCAGACAACAGCAAGCAAGCCTTATTTTGGAAGAGTTTGTGGAAATCTAATGTGCTCCCTAGATCCAAAGTGTGTGCTTGGAAGATCGTCAACGACATCATCCCCTCCAAAGCCAACATTCTAAAAAAGGGAGTAGATTTAAACCCTCTTTGTGGCATTTGTGGAAAGAAGCTAGAATCAACCACTCATCCCATTTGGGAGTGTAAAATCCCGAGGGAAGGGTGGACTCGATGCCTACCTAGCTCACTGAACCTATTCTCTCTTTGCAGGGACAATTGGACAACAAAGGACTCTTGGAGCAGGATGATGATTAACCTTAGCAAAGAAGACCTTGATAAAGGAATCACAATCATGTGGAAGATATGGAATTTTCACAACCATAATGGAGATCACAACCAAATTAGAGCAATAGAGTACTTAGTACATGATATTCAGACTAGTATTACCGAATGTGAAGCTTCTTACCTCAAGACTCAAGCCTCGAAAAGGCCAGGGAACCAGGTGAGTCAGCTTCAGTGGATGAAGCCAAAATCAAATTGCTAGAAAATGAACTCTGACGCCTCGTGGAACGAAACCTTGGGGCAGGGAGGGCTACGTTGGATCGTGCGTGACTCGAATGGATCCTTGGTCTATTTCGGAATGCAAAAAATCACGAGAAAATCGCCCATCAAAATCCTAGAGGCAAAAGAAATCCTAGCGGGTTTGAAACACATTGTGGGTACCTGTAATCAACGCTCAATCCCCTTGGAAGTAGAATCTGACGCATTGGAAGTCGTCAATGTGATCGTCGAAGTCGCTGAAGACTTATCGGATCTGAAACCCAATTTTTATACATCATGCATAACAAATATATACCAAATTTTAGATTATCCACCAATAAGAATTTAA
mRNA sequence
ATGAAAATCAATGCTCATCACTCGTCCTCCCAATCAGACAACAGCAAGCAAGCCTTATTTTGGAAGAGTTTGTGGAAATCTAATGTGCTCCCTAGATCCAAAGTGTGTGCTTGGAAGATCGTCAACGACATCATCCCCTCCAAAGCCAACATTCTAAAAAAGGGAGTAGATTTAAACCCTCTTTGTGGCATTTGTGGAAAGAAGCTAGAATCAACCACTCATCCCATTTGGGAGTGTAAAATCCCGAGGGAAGGGTGGACTCGATGCCTACCTAGCTCACTGAACCTATTCTCTCTTTGCAGGGACAATTGGACAACAAAGGACTCTTGGAGCAGGATGATGATTAACCTTAGCAAAGAAGACCTTGATAAAGGAATCACAATCATGTGGAAGATATGGAATTTTCACAACCATAATGGAGATCACAACCAAATTAGAGCAATAGAGTACTTAGTACATGATATTCAGACTAGTATTACCGAATGTGAAGCTTCTTACCTCAAGACTCAAGCCTCGAAAAGGCCAGGGAACCAGGGAGGGCTACGTTGGATCGTGCGTGACTCGAATGGATCCTTGGTCTATTTCGGAATGCAAAAAATCACGAGAAAATCGCCCATCAAAATCCTAGAGGCAAAAGAAATCCTAGCGGGTTTGAAACACATTGTGGGTACCTGTAATCAACGCTCAATCCCCTTGGAAGTAGAATCTGACGCATTGGAAGTCGTCAATGTGATCGTCGAAGTCGCTGAAGACTTATCGGATCTGAAACCCAATTTTTATACATCATGCATAACAAATATATACCAAATTTTAGATTATCCACCAATAAGAATTTAA
Coding sequence (CDS)
ATGAAAATCAATGCTCATCACTCGTCCTCCCAATCAGACAACAGCAAGCAAGCCTTATTTTGGAAGAGTTTGTGGAAATCTAATGTGCTCCCTAGATCCAAAGTGTGTGCTTGGAAGATCGTCAACGACATCATCCCCTCCAAAGCCAACATTCTAAAAAAGGGAGTAGATTTAAACCCTCTTTGTGGCATTTGTGGAAAGAAGCTAGAATCAACCACTCATCCCATTTGGGAGTGTAAAATCCCGAGGGAAGGGTGGACTCGATGCCTACCTAGCTCACTGAACCTATTCTCTCTTTGCAGGGACAATTGGACAACAAAGGACTCTTGGAGCAGGATGATGATTAACCTTAGCAAAGAAGACCTTGATAAAGGAATCACAATCATGTGGAAGATATGGAATTTTCACAACCATAATGGAGATCACAACCAAATTAGAGCAATAGAGTACTTAGTACATGATATTCAGACTAGTATTACCGAATGTGAAGCTTCTTACCTCAAGACTCAAGCCTCGAAAAGGCCAGGGAACCAGGGAGGGCTACGTTGGATCGTGCGTGACTCGAATGGATCCTTGGTCTATTTCGGAATGCAAAAAATCACGAGAAAATCGCCCATCAAAATCCTAGAGGCAAAAGAAATCCTAGCGGGTTTGAAACACATTGTGGGTACCTGTAATCAACGCTCAATCCCCTTGGAAGTAGAATCTGACGCATTGGAAGTCGTCAATGTGATCGTCGAAGTCGCTGAAGACTTATCGGATCTGAAACCCAATTTTTATACATCATGCATAACAAATATATACCAAATTTTAGATTATCCACCAATAAGAATTTAA
Protein sequence
MKINAHHSSSQSDNSKQALFWKSLWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLNPLCGICGKKLESTTHPIWECKIPREGWTRCLPSSLNLFSLCRDNWTTKDSWSRMMINLSKEDLDKGITIMWKIWNFHNHNGDHNQIRAIEYLVHDIQTSITECEASYLKTQASKRPGNQGGLRWIVRDSNGSLVYFGMQKITRKSPIKILEAKEILAGLKHIVGTCNQRSIPLEVESDALEVVNVIVEVAEDLSDLKPNFYTSCITNIYQILDYPPIRI
Homology
BLAST of Lag0008219 vs. NCBI nr
Match:
KAF4391976.1 (hypothetical protein F8388_004305 [Cannabis sativa])
HSP 1 Score: 102.4 bits (254), Expect = 6.2e-18
Identity = 68/274 (24.82%), Postives = 130/274 (47.45%), Query Frame = 0
Query: 10 SQSDNSKQA-LFWKSLWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLNPLCGICGKK 69
++S N Q +WK W N+ PR K+ WK+ + +P+K N++ +G+ +NP+C CG+
Sbjct: 112 TRSSNMDQTHAWWKMWWGLNLPPRMKLFGWKMCRNWLPAKTNLVHRGMKINPICTNCGRF 171
Query: 70 LESTTHPIWECKIPREGWTRCLPSSLNLFSLCRDNWTTKDSWSRMMINLSKEDLDKGITI 129
E+ +H +W C+ ++ W L S N+ R N + D L+KE+ + + +
Sbjct: 172 DETLSHALWNCEKVKKVWK--LMPSYNIIKDSRGN-SMMDLLVEFKHKLAKEEFEDVVKV 231
Query: 130 MWKIWNFHNHNGDHNQI----RAIEYLVHDI------QTSITECEASYLKTQ-------- 189
+W IW N + I R ++++ + Q ++T+ + K Q
Sbjct: 232 LWAIWENRNRQWTNQHIMNGARLLDWVFNSYPREIHGQENLTKMHPAAEKNQWQTPPVGT 291
Query: 190 ------ASKRPGNQG-GLRWIVRDSNGSLVYFGMQKITRKSPIKILEAKEILAGLKHIVG 249
A+ +P +G G+ ++ +D G+++ GM+ + I EA+ + A L
Sbjct: 292 YCVHCDAALKPNQEGVGIGYVWQDWKGNILSAGMKYQPIFCNVNIAEAQAVAAALNDKPK 351
Query: 250 TCNQRSIPLEVESDALEVVNVIVEVAEDLSDLKP 258
+ + P E+ +D+ +V+ IV L D+KP
Sbjct: 352 SVHH---PFEIRTDSKLLVDAIVHNGNSLDDMKP 379
BLAST of Lag0008219 vs. NCBI nr
Match:
KAF4384439.1 (hypothetical protein G4B88_028513 [Cannabis sativa] >KAF4392273.1 hypothetical protein F8388_012729 [Cannabis sativa])
HSP 1 Score: 100.9 bits (250), Expect = 1.8e-17
Identity = 68/274 (24.82%), Postives = 125/274 (45.62%), Query Frame = 0
Query: 10 SQSDNSKQA-LFWKSLWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLNPLCGICGKK 69
++S N Q +WK W N+ PR K+ WK+ + +P+K N++ +G+ +N +C CG+
Sbjct: 138 TRSSNMDQTHAWWKMWWGLNLPPRMKLFGWKMCRNWLPAKTNLVHRGMKINSICTNCGRF 197
Query: 70 LESTTHPIWECKIPREGWTRCLPSSLNLFSLCRDNWTTKDSWSRMMINLSKEDLDKGITI 129
E+ +H +W C+ ++ W L S N+ R N + D L KE+ + + +
Sbjct: 198 DETLSHALWNCEKVKKVWK--LMPSYNIIKDSRGN-SMMDLLVEFKHKLVKEEFEDVVKV 257
Query: 130 MWKIWNFHNHNGDH----NQIRAIEYLVHDIQTSI-------------------TECEAS 189
+W IW N + N R +E++ + I T +
Sbjct: 258 LWAIWENRNRQWTNQHTMNGARLLEWVFNSYPREIHGQENMAKIHPAAETDQWQTPSVGT 317
Query: 190 Y-LKTQASKRPGNQG-GLRWIVRDSNGSLVYFGMQKITRKSPIKILEAKEILAGLKHIVG 249
Y + A+ +P +G GL ++ +D G+++ GM+ +K+ EAK + A L
Sbjct: 318 YCVHCDAALKPNQEGVGLGYVWQDWKGNIISAGMKYQPIFCNVKVAEAKAVAAALNDKPK 377
Query: 250 TCNQRSIPLEVESDALEVVNVIVEVAEDLSDLKP 258
+ P E+ +D+ +++ IV L D+KP
Sbjct: 378 NIHH---PFEIRTDSKQLMEAIVHNGNSLDDMKP 405
BLAST of Lag0008219 vs. NCBI nr
Match:
XP_021847414.1 (uncharacterized protein LOC110787151 [Spinacia oleracea])
HSP 1 Score: 97.8 bits (242), Expect = 1.5e-16
Identity = 67/275 (24.36%), Postives = 112/275 (40.73%), Query Frame = 0
Query: 14 NSKQALFWKSLWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLNPLCGICGKKLESTT 73
+S + WK +WK NVLPR KV AW+ ++ +P++ + K+ + +CG+C + ES
Sbjct: 857 SSNPSSLWKQIWKLNVLPRVKVFAWRACHEALPTRKGLSKRVAGYDAVCGVCHCEDESVI 916
Query: 74 HPIWECKIPREGWTRCLPSSLNLFSLCRDNWTTKDSWSRMMINLSKEDLDKGITIMWKIW 133
H + ECK+ R W + + C + D W R L E +++ IT+ W +W
Sbjct: 917 HAVRECKLARAIWCESRFEHMLSWQCC----SLVDWWDRGFKELDSEGMEEFITLCWAVW 976
Query: 134 NFHNHNGDHNQIRAIEYLVHD----IQTSITECEASYLKTQASKRPGNQGGLRW------ 193
N +E L D ++ + T C + R + GG W
Sbjct: 977 GARNK-------AVMEGLTSDPTSTVKYATTVCNELRQEGVKGSRGSSGGGAEWAVEWSK 1036
Query: 194 ------------------------IVRDSNGSLVYFGMQKITRKSPIKILEAKEILAGLK 253
++RD G +V +++ K + EAK +L G++
Sbjct: 1037 PEEGWYKVNVDAGLLGEVGSGMGAVIRDDEGGVVSCAVRQGCEKWATNVAEAKAVLFGME 1096
Query: 254 HIVGTCNQRSIPLEVESDALEVVNVIVEVAEDLSD 255
QR + VESD L V+ + A S+
Sbjct: 1097 LCAELGMQRVV---VESDCLGVIQALRREASGCSE 1117
BLAST of Lag0008219 vs. NCBI nr
Match:
KAF4399153.1 (hypothetical protein G4B88_023747 [Cannabis sativa])
HSP 1 Score: 93.6 bits (231), Expect = 2.9e-15
Identity = 82/306 (26.80%), Postives = 139/306 (45.42%), Query Frame = 0
Query: 2 KINAH--HSSSQSDNSKQALFWKSLWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLN 61
+IN H SS+ D K +WK LW ++ PR K+ W++ ++ +P+K N+ +G+D+N
Sbjct: 82 EINLHPTRSSNMEDIHK---WWKMLWSMSLPPRMKLFGWRVCHNWLPAKINLAHRGMDVN 141
Query: 62 PLCGICGKKLESTTHPIWECKIPREGWTRCLPSSLNLFSLCR--DNWTTKDSWSRMMINL 121
C +CG + E+ TH +W C + W + +P + C N + D + +L
Sbjct: 142 LSCDLCGHQAETLTHALWGCAKVKTIW-KLVP----WYHKCAHFKNGSMFDIMVTLKDHL 201
Query: 122 SKEDLDKGITIMWKIWNFHNHNGDH----NQIRAIEYL---VHDIQTSITECEASYLKTQ 181
K + ++ I IMW IW N + N I+ ++++ D + S + +K Q
Sbjct: 202 HKSEFEEAIKIMWAIWENRNRYWNKLPVMNGIQLLDWIFTAYPDSRNSKEQTMNIDMKHQ 261
Query: 182 ASK---RP---------------GNQG-GLRWIVRDSNGSLVYFGMQKITRKSPIKILEA 241
K RP G G G +I RD G+L+ GM +++ EA
Sbjct: 262 QPKKWIRPPTRHISVNCDAAMTNGTAGVGTGFIWRDWEGNLLLAGMVYHQSCCSVEMAEA 321
Query: 242 KEILAGLKHIVGTCNQRSIPLEVESDALEVV-------NVIVEVAEDLSDLKPNFYTSCI 271
IL LKH T N + +E++SD ++V N + V+ L ++ +S
Sbjct: 322 WAILEALKHQPHTAN---MAIEIQSDCKKIVDEIQHRDNKLSAVSTILHQIQDRMDSSNC 376
BLAST of Lag0008219 vs. NCBI nr
Match:
KAF4366980.1 (hypothetical protein F8388_022768 [Cannabis sativa])
HSP 1 Score: 93.6 bits (231), Expect = 2.9e-15
Identity = 61/262 (23.28%), Postives = 109/262 (41.60%), Query Frame = 0
Query: 20 FWKSLWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLNPLCGICGKKLESTTHPIWEC 79
+WK WK + PR K+ W++ N+ +P+K N+ +G+++NP+C +CG +E+ H +W C
Sbjct: 435 WWKKFWKLQLPPRMKMFGWRVCNNWLPAKTNLCHRGMNINPVCDLCGYHVETLPHALWSC 494
Query: 80 KIPREGWTRCLPSSLNLFSLCRDNWTTKDSWSRMMINLSKEDLDKGITIMWKIWNFHNHN 139
++ W + P L + D + + LS+ + + + IMW IW N
Sbjct: 495 DKVKQVW-KLTPWYKKCGKL--GEGSMFDILTSLREKLSRNEFEDALKIMWAIWENRNRK 554
Query: 140 GDHNQIRAIEYLVHDIQTSITECEASYLKTQASKRPGNQGGLRW---------------- 199
+ + L+ + T+ ++ ++ + K + W
Sbjct: 555 WNKLHVMNGIQLLDWVFTTYPPASSNPMEEETKKVASPSNPMHWQAPHVGKICVNCDAAM 614
Query: 200 -----------IVRDSNGSLVYFGMQKITRKSPIKILEAKEILAGLKHIVGTCNQRSIPL 255
I RD NG+++ GM I I + EA EI LK + P+
Sbjct: 615 IPNQIGVGVGFIWRDWNGNVLNVGMIYIHSSCSINVAEAWEIHEALKK---HPRSETRPV 674
BLAST of Lag0008219 vs. ExPASy TrEMBL
Match:
A0A7J6H9M1 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_004305 PE=4 SV=1)
HSP 1 Score: 102.4 bits (254), Expect = 3.0e-18
Identity = 68/274 (24.82%), Postives = 130/274 (47.45%), Query Frame = 0
Query: 10 SQSDNSKQA-LFWKSLWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLNPLCGICGKK 69
++S N Q +WK W N+ PR K+ WK+ + +P+K N++ +G+ +NP+C CG+
Sbjct: 112 TRSSNMDQTHAWWKMWWGLNLPPRMKLFGWKMCRNWLPAKTNLVHRGMKINPICTNCGRF 171
Query: 70 LESTTHPIWECKIPREGWTRCLPSSLNLFSLCRDNWTTKDSWSRMMINLSKEDLDKGITI 129
E+ +H +W C+ ++ W L S N+ R N + D L+KE+ + + +
Sbjct: 172 DETLSHALWNCEKVKKVWK--LMPSYNIIKDSRGN-SMMDLLVEFKHKLAKEEFEDVVKV 231
Query: 130 MWKIWNFHNHNGDHNQI----RAIEYLVHDI------QTSITECEASYLKTQ-------- 189
+W IW N + I R ++++ + Q ++T+ + K Q
Sbjct: 232 LWAIWENRNRQWTNQHIMNGARLLDWVFNSYPREIHGQENLTKMHPAAEKNQWQTPPVGT 291
Query: 190 ------ASKRPGNQG-GLRWIVRDSNGSLVYFGMQKITRKSPIKILEAKEILAGLKHIVG 249
A+ +P +G G+ ++ +D G+++ GM+ + I EA+ + A L
Sbjct: 292 YCVHCDAALKPNQEGVGIGYVWQDWKGNILSAGMKYQPIFCNVNIAEAQAVAAALNDKPK 351
Query: 250 TCNQRSIPLEVESDALEVVNVIVEVAEDLSDLKP 258
+ + P E+ +D+ +V+ IV L D+KP
Sbjct: 352 SVHH---PFEIRTDSKLLVDAIVHNGNSLDDMKP 379
BLAST of Lag0008219 vs. ExPASy TrEMBL
Match:
A0A7J6HAE9 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012729 PE=4 SV=1)
HSP 1 Score: 100.9 bits (250), Expect = 8.8e-18
Identity = 68/274 (24.82%), Postives = 125/274 (45.62%), Query Frame = 0
Query: 10 SQSDNSKQA-LFWKSLWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLNPLCGICGKK 69
++S N Q +WK W N+ PR K+ WK+ + +P+K N++ +G+ +N +C CG+
Sbjct: 138 TRSSNMDQTHAWWKMWWGLNLPPRMKLFGWKMCRNWLPAKTNLVHRGMKINSICTNCGRF 197
Query: 70 LESTTHPIWECKIPREGWTRCLPSSLNLFSLCRDNWTTKDSWSRMMINLSKEDLDKGITI 129
E+ +H +W C+ ++ W L S N+ R N + D L KE+ + + +
Sbjct: 198 DETLSHALWNCEKVKKVWK--LMPSYNIIKDSRGN-SMMDLLVEFKHKLVKEEFEDVVKV 257
Query: 130 MWKIWNFHNHNGDH----NQIRAIEYLVHDIQTSI-------------------TECEAS 189
+W IW N + N R +E++ + I T +
Sbjct: 258 LWAIWENRNRQWTNQHTMNGARLLEWVFNSYPREIHGQENMAKIHPAAETDQWQTPSVGT 317
Query: 190 Y-LKTQASKRPGNQG-GLRWIVRDSNGSLVYFGMQKITRKSPIKILEAKEILAGLKHIVG 249
Y + A+ +P +G GL ++ +D G+++ GM+ +K+ EAK + A L
Sbjct: 318 YCVHCDAALKPNQEGVGLGYVWQDWKGNIISAGMKYQPIFCNVKVAEAKAVAAALNDKPK 377
Query: 250 TCNQRSIPLEVESDALEVVNVIVEVAEDLSDLKP 258
+ P E+ +D+ +++ IV L D+KP
Sbjct: 378 NIHH---PFEIRTDSKQLMEAIVHNGNSLDDMKP 405
BLAST of Lag0008219 vs. ExPASy TrEMBL
Match:
A0A7J6FB29 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_022768 PE=4 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 1.4e-15
Identity = 61/262 (23.28%), Postives = 109/262 (41.60%), Query Frame = 0
Query: 20 FWKSLWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLNPLCGICGKKLESTTHPIWEC 79
+WK WK + PR K+ W++ N+ +P+K N+ +G+++NP+C +CG +E+ H +W C
Sbjct: 435 WWKKFWKLQLPPRMKMFGWRVCNNWLPAKTNLCHRGMNINPVCDLCGYHVETLPHALWSC 494
Query: 80 KIPREGWTRCLPSSLNLFSLCRDNWTTKDSWSRMMINLSKEDLDKGITIMWKIWNFHNHN 139
++ W + P L + D + + LS+ + + + IMW IW N
Sbjct: 495 DKVKQVW-KLTPWYKKCGKL--GEGSMFDILTSLREKLSRNEFEDALKIMWAIWENRNRK 554
Query: 140 GDHNQIRAIEYLVHDIQTSITECEASYLKTQASKRPGNQGGLRW---------------- 199
+ + L+ + T+ ++ ++ + K + W
Sbjct: 555 WNKLHVMNGIQLLDWVFTTYPPASSNPMEEETKKVASPSNPMHWQAPHVGKICVNCDAAM 614
Query: 200 -----------IVRDSNGSLVYFGMQKITRKSPIKILEAKEILAGLKHIVGTCNQRSIPL 255
I RD NG+++ GM I I + EA EI LK + P+
Sbjct: 615 IPNQIGVGVGFIWRDWNGNVLNVGMIYIHSSCSINVAEAWEIHEALKK---HPRSETRPV 674
BLAST of Lag0008219 vs. ExPASy TrEMBL
Match:
A0A7J6HVA4 (Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_023747 PE=4 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 1.4e-15
Identity = 82/306 (26.80%), Postives = 139/306 (45.42%), Query Frame = 0
Query: 2 KINAH--HSSSQSDNSKQALFWKSLWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLN 61
+IN H SS+ D K +WK LW ++ PR K+ W++ ++ +P+K N+ +G+D+N
Sbjct: 82 EINLHPTRSSNMEDIHK---WWKMLWSMSLPPRMKLFGWRVCHNWLPAKINLAHRGMDVN 141
Query: 62 PLCGICGKKLESTTHPIWECKIPREGWTRCLPSSLNLFSLCR--DNWTTKDSWSRMMINL 121
C +CG + E+ TH +W C + W + +P + C N + D + +L
Sbjct: 142 LSCDLCGHQAETLTHALWGCAKVKTIW-KLVP----WYHKCAHFKNGSMFDIMVTLKDHL 201
Query: 122 SKEDLDKGITIMWKIWNFHNHNGDH----NQIRAIEYL---VHDIQTSITECEASYLKTQ 181
K + ++ I IMW IW N + N I+ ++++ D + S + +K Q
Sbjct: 202 HKSEFEEAIKIMWAIWENRNRYWNKLPVMNGIQLLDWIFTAYPDSRNSKEQTMNIDMKHQ 261
Query: 182 ASK---RP---------------GNQG-GLRWIVRDSNGSLVYFGMQKITRKSPIKILEA 241
K RP G G G +I RD G+L+ GM +++ EA
Sbjct: 262 QPKKWIRPPTRHISVNCDAAMTNGTAGVGTGFIWRDWEGNLLLAGMVYHQSCCSVEMAEA 321
Query: 242 KEILAGLKHIVGTCNQRSIPLEVESDALEVV-------NVIVEVAEDLSDLKPNFYTSCI 271
IL LKH T N + +E++SD ++V N + V+ L ++ +S
Sbjct: 322 WAILEALKHQPHTAN---MAIEIQSDCKKIVDEIQHRDNKLSAVSTILHQIQDRMDSSNC 376
BLAST of Lag0008219 vs. ExPASy TrEMBL
Match:
A0A6J1DL64 (uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022134 PE=4 SV=1)
HSP 1 Score: 92.8 bits (229), Expect = 2.4e-15
Identity = 61/213 (28.64%), Postives = 98/213 (46.01%), Query Frame = 0
Query: 67 KKLESTTHPIWECKIPREGWTRCLPSSLNLFSLCRDNWTTKDSWSRMMINLSKEDLDKGI 126
KK E+T H +WECK+ ++ W C P N F + R NWTTK+ W +M +E+ + +
Sbjct: 132 KKEETTQHILWECKVIKDIWINCTPIEANFFYIDRTNWTTKEYWEWLMDKAGEEERRRSM 191
Query: 127 TIMWKIWNFHNHN---GDHNQIRAIE-----YLV----------------HDIQTSITEC 186
I +IW N + G H++ R I+ Y++ H I+
Sbjct: 192 IIACQIWEMRNKSIFKGVHSETRDIQLAIDRYIINSAGQDTNLKRKSKDFHPIRRIGDNT 251
Query: 187 EASY---------LKTQASKRPG-NQGGLRWIVRDSNGSLVYFGMQKITRKSPIKILEAK 246
A + L T A+ R N G+ WI+RD G ++ G + I + I LE
Sbjct: 252 RARWKPPTSNSWKLNTDAAWRADTNTDGIGWILRDEKGEVIKTGCRIIRAERNITYLEVM 311
BLAST of Lag0008219 vs. TAIR 10
Match:
AT3G26855.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 45.8 bits (107), Expect = 6.5e-05
Identity = 16/56 (28.57%), Postives = 31/56 (55.36%), Query Frame = 0
Query: 24 LWKSNVLPRSKVCAWKIVNDIIPSKANILKKGVDLNPLCGICGKKLESTTHPIWEC 80
+W + P+ K+ WK +N+ +P A +L + + + P C C + E+ TH ++ C
Sbjct: 9 IWSLKISPKIKLLIWKALNNALPVGAQLLSRNISIEPFCTRC-RDFETITHILFNC 63
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAF4391976.1 | 6.2e-18 | 24.82 | hypothetical protein F8388_004305 [Cannabis sativa] | [more] |
KAF4384439.1 | 1.8e-17 | 24.82 | hypothetical protein G4B88_028513 [Cannabis sativa] >KAF4392273.1 hypothetical p... | [more] |
XP_021847414.1 | 1.5e-16 | 24.36 | uncharacterized protein LOC110787151 [Spinacia oleracea] | [more] |
KAF4399153.1 | 2.9e-15 | 26.80 | hypothetical protein G4B88_023747 [Cannabis sativa] | [more] |
KAF4366980.1 | 2.9e-15 | 23.28 | hypothetical protein F8388_022768 [Cannabis sativa] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A7J6H9M1 | 3.0e-18 | 24.82 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_004305 PE=4 SV=1 | [more] |
A0A7J6HAE9 | 8.8e-18 | 24.82 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_012729 PE=4 SV=1 | [more] |
A0A7J6FB29 | 1.4e-15 | 23.28 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=F8388_022768 PE=4 SV=1 | [more] |
A0A7J6HVA4 | 1.4e-15 | 26.80 | Uncharacterized protein OS=Cannabis sativa OX=3483 GN=G4B88_023747 PE=4 SV=1 | [more] |
A0A6J1DL64 | 2.4e-15 | 28.64 | uncharacterized protein LOC111022134 isoform X1 OS=Momordica charantia OX=3673 G... | [more] |
Match Name | E-value | Identity | Description | |
AT3G26855.1 | 6.5e-05 | 28.57 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |