Lag0008080 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0008080
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr9: 11535427 .. 11536179 (+)
RNA-Seq Expression	Lag0008080
Synteny	Lag0008080

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCACACACACCAACCAAACAACCACCGGAACACAGACACACCCCACAATCAAACAAGCACACCTTACTACCCAAACTCAGATCCTGCCAACCAAACACAACCCCTGCCAGAAAAAACCCAACCCGCTGCCAAACCCCTATCAGCGCAAGACCCACTTTGTTACCACCACACGAAGCCACCCTCGCAAACCTGCCGTAACAAACCCAAATCACGCCCCAAATCAAGCGATAAGGCTCGACGCATCTGGGGAACACCAAACCCACCACCCGCTCAGACCAACAGACCACCCCTCACGCCGACCCTCCTCCGTCGCAACCAGCCGCCACACATCTGCCCAAGAAAACCCCCCCGTACCTGTCGCCGCCGCACGCCACCGAGGAACGCAAGAAGGCCACCCCACACCACACCGCACGCCGCCGGAGAAAACCGCCACCGCCACCGGATCGAAGCCTCGCCTCCACCGCCGCACACAACAGATCTGCTCAAGAAACCCAGCCCTCACCTGTCACCGCCGCAGCCACAGATCTGCGCAAGACAGCCCTCCACACACCGCGCCGCACGCCACCGAGGAAGCACCGCCACCGCCAAGCCTCCGCCGCTACGCCTCCACCGCAGACCAACCGCGCCGCCACCCCTCAGCCTCCAACTCACCGAAACCCTAACCCCCAATAAACAGGGAAAACCCTCACGTCGAGGGAAACTCTCAAGAAGAGAGAAAAAAAAAAAGAAGGCTTATTTTTTCAGAATGTGA

mRNA sequence

ATGCACACACACCAACCAAACAACCACCGGAACACAGACACACCCCACAATCAAACAAGCACACCTTACTACCCAAACTCAGATCCTGCCAACCAAACACAACCCCTGCCAGAAAAAACCCAACCCGCTGCCAAACCCCTATCAGCGCAAGACCCACTTTGTTACCACCACACGAAGCCACCCTCGCAAACCTGCCGTAACAAACCCAAATCACGCCCCAAATCAAGCGATAAGGCTCGACGCATCTGGGGAACACCAAACCCACCACCCGCTCAGACCAACAGACCACCCCTCACGCCGACCCTCCTCCGTCGCAACCAGCCGCCACACATCTGCCCAAGAAAACCCCCCCGTACCTGTCGCCGCCGCACGCCACCGAGGAACGCAAGAAGGCCACCCCACACCACACCGCACGCCGCCGGAGAAAACCGCCACCGCCACCGGATCGAAGCCTCGCCTCCACCGCCGCACACAACAGATCTGCTCAAGAAACCCAGCCCTCACCTGTCACCGCCGCAGCCACAGATCTGCGCAAGACAGCCCTCCACACACCGCGCCGCACGCCACCGAGGAAGCACCGCCACCGCCAAGCCTCCGCCGCTACGCCTCCACCGCAGACCAACCGCGCCGCCACCCCTCAGCCTCCAACTCACCGAAACCCTAACCCCCAATAAACAGGGAAAACCCTCACGTCGAGGGAAACTCTCAAGAAGAGAGAAAAAAAAAAAGAAGGCTTATTTTTTCAGAATGTGA

Coding sequence (CDS)

ATGCACACACACCAACCAAACAACCACCGGAACACAGACACACCCCACAATCAAACAAGCACACCTTACTACCCAAACTCAGATCCTGCCAACCAAACACAACCCCTGCCAGAAAAAACCCAACCCGCTGCCAAACCCCTATCAGCGCAAGACCCACTTTGTTACCACCACACGAAGCCACCCTCGCAAACCTGCCGTAACAAACCCAAATCACGCCCCAAATCAAGCGATAAGGCTCGACGCATCTGGGGAACACCAAACCCACCACCCGCTCAGACCAACAGACCACCCCTCACGCCGACCCTCCTCCGTCGCAACCAGCCGCCACACATCTGCCCAAGAAAACCCCCCCGTACCTGTCGCCGCCGCACGCCACCGAGGAACGCAAGAAGGCCACCCCACACCACACCGCACGCCGCCGGAGAAAACCGCCACCGCCACCGGATCGAAGCCTCGCCTCCACCGCCGCACACAACAGATCTGCTCAAGAAACCCAGCCCTCACCTGTCACCGCCGCAGCCACAGATCTGCGCAAGACAGCCCTCCACACACCGCGCCGCACGCCACCGAGGAAGCACCGCCACCGCCAAGCCTCCGCCGCTACGCCTCCACCGCAGACCAACCGCGCCGCCACCCCTCAGCCTCCAACTCACCGAAACCCTAACCCCCAATAAACAGGGAAAACCCTCACGTCGAGGGAAACTCTCAAGAAGAGAGAAAAAAAAAAAGAAGGCTTATTTTTTCAGAATGTGA

Protein sequence

MHTHQPNNHRNTDTPHNQTSTPYYPNSDPANQTQPLPEKTQPAAKPLSAQDPLCYHHTKPPSQTCRNKPKSRPKSSDKARRIWGTPNPPPAQTNRPPLTPTLLRRNQPPHICPRKPPRTCRRRTPPRNARRPPHTTPHAAGENRHRHRIEASPPPPHTTDLLKKPSPHLSPPQPQICARQPSTHRAARHRGSTATAKPPPLRLHRRPTAPPPLSLQLTETLTPNKQGKPSRRGKLSRREKKKKKAYFFRM

Homology

The following BLAST results are available for this feature:

BLAST of Lag0008080 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0008080 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0008080 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0008080 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 115..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 213..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..39
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 137..153
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 230..250
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0008080.1	Lag0008080.1	mRNA