Lag0008061 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0008061
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Unknown protein
Location	chr9: 11135612 .. 11137898 (+)
RNA-Seq Expression	Lag0008061
Synteny	Lag0008061

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGGCGTTGGTAGGTGGGTAGGTTTTGGAGTTGAGGGCACAGTCTCCGTGGGGTGTGGCTTTGCCTTTGGCTTCGAACACGAAAAAGGAAGAGGAAGAGCAAAAAGGCTTTCCGTCAAAACAGATGGGAGATTGGGAACGAACAAGGAACATATTTGGAAATAAATTCATTTTTTTATTTAATTTTAAATTACCAATTTAGAATCTCTCCACAAATGACTTTCTATAAATTTTTAAAATGTTTTTAATCACTTTGAAGGGTAATGTTTGTTTTTTTTTTTTTTTTTTCAACATGAGACTAGCTCAATAGGCATAAAGATTGCGGGTTTGGAATACATTCCAATTTAAATGTTTTTCAAGAATTCATTTTTTAAAAAACATTTTGTATAAAAATTGTTTAGAATTTCAACACTCATCAGTTTGGTTGCATTTTTCACAAGTGTTTTTATGCTCAAGTTCTTGTATACTTAAAAACTTTTTTTTGGAAAAGATGGTTTCAAGTGTTTCTCTCAAAATGGTTTATTTGTCAATCACATTTTCTAATAAGTCATTTTTAGTGGTTGCCAAACACTAGAATTTTTTTTAAAATGATTTTTTTTCAAAATTAAACACTTGAAAAGGTAAACCAAACACACCCTACATTAACGATCATCAGGTTCATGGTTCGAATCTCCTATTGTCAAAAAAAAAGTAAATACATTTTAATTTAAATGTTTTCCAAAAATGCATTTTTTTAAAAAAAACATTTTGTATAAAAACCATTTAGAATTAAAACGGTTACATTTCCTCATAATTTTTTTTATATCTAAATTATTATATAATTAAAAACTTTTTTAAAAAATTTTGTTTTTGTCTTTCTATTTATTTCTCCATCTCATTTTTTTAATAAACCATTTTTAGTGGTTGTACAACACTAGAATTTTTTTCCAAAATTAAACAATTGTAAAGTGTAATTTTTCAATGATTTGCCAAATAAATGGTGTCTTTAACTAGTTGGCCCTAAATTTATATATATGTGTGTGTGTGAAATCTTTTATTTGAGATACATTTCAAAACTTTAAATTTAAATTTAGCAATAGGTAATTCACCCATTCTACATTGTTAAAATTTTATAAATTCGTTGGACACAAAATTAAAAAGTTATCACTTTATAAGACACAAAATTCATCAAGTACAGCCAAAGCGAGCTTAGTTCAGTGGTAATTGGCATGTACTCTCGACCACGAGGTCAGAGGTTCAAATCCCCCCACCCCCAAATGTTGATGTACTCAAAAAAAAAAAAAAATTCATCAAGTACAATAGTAAACACAAACTTTGGGAAAAATACACTTTTGGTCTTCATTTTGGTCCCTGAATTTTCAAACTCAACAATTTAGTCCATGAGGTTTGGTTTTAGTTTCATTTTAGTCCCTCCATCCATTTTTCCGTTAAAAACTAACGGAGGGCTGAGATGTCACTACTTTTTTTTTTTATTAAAAAAGTTATTTTTAAATTAAAATAATTTTTTAAATAAAAATAATAAAAATATTATTTTTTAATAAATTTAATTATTTCTCTCCACATCATCACCATCTTCTTCTTCCTCACTTCACCACCAACCACCAGCCACCACCCACTGTTACACACATCGTCGCCGGCGGCAACTGTTTTTTTTCTTTTCTTTTCTTCTTTTCTTTTCTCTCTCCATTTTCTTTTAGCCCCCCCCCTCTCTCTTCCGACCGTCGCTCACACTCACGCCCACACTCAAACCAGTGCCAGCCATCGCTCACACCCGCCGCACGTTCACCGGCGCTACCAGATCCAAAGTACTAGAGCCTCGAACACCCACGCCAGAACAAAACCCACACAAAAATCATTCCAGATCTGAAGTATTGGAGCCTCGAAAATTGATTTCGAGCAATGCAGATTTGGGTGTTCCAGATCTGAACAAAACCCGCCCGTTCGCTCTTGAAATCGATTGTACAGATTTGGGTGTGAGCGACATGAGCAGTGCTTCGAAGGTACAAAACCCACATGAGCAGGGCCTCGAAAATCGATTACAAAACCCACACGAGCAGGGCCTCATAACTCTCCAAATCTGGCTGATTGCTCTTCGTTTCAGATCGGGCGGCGACTGCGAACGAGCTGCAAAGGGGGAGCGACGAACGGTGGTGAATGGTCTACAAACTTCAGTTTCAGAAGCGGACTTCAACGACAAACGGGCGACGGACTTCAGAGGCGGAGGGAAGGAAGAGGGGAGGAGAGAAAAGGAAAAAAAAGGAGAAAAAGTAAAGAAAAAATGCTAA

mRNA sequence

ATGGAGGCGTTGCCCCCCCCCTCTCTCTTCCGACCGTCGCTCACACTCACGCCCACACTCAAACCAGTGCCAGCCATCGCTCACACCCGCCGCACGTTCACCGGCGCTACCAGATCCAAAGTACTAGAGCCTCGAACACCCACGCCAGAACAAAACCCACACAAAAATCATTCCAGATCTGAAGTATTGGAGCCTCGAAAATTGATTTCGAGCAATGCAGATTTGGGTGTTCCAGATCTGAACAAAACCCGCCCGTTCGCTCTTGAAATCGATTGTACAGATTTGGGTGTGAGCGACATGAGCAGTGCTTCGAAGGTACAAAACCCACATGAGCAGGGCCTCGAAAATCGATTACAAAACCCACACGAGCAGGGCCTCATAACTCTCCAAATCTGGCTGATTGCTCTTCGTTTCAGATCGGGCGGCGACTGCGAACGAGCTGCAAAGGGGGAGCGACGAACGGTGGTGAATGGTCTACAAACTTCAGTTTCAGAAGCGGACTTCAACGACAAACGGGCGACGGACTTCAGAGGCGGAGGGAAGGAAGAGGGGAGGAGAGAAAAGGAAAAAAAAGGAGAAAAAGTAAAGAAAAAATGCTAA

Coding sequence (CDS)

ATGGAGGCGTTGCCCCCCCCCTCTCTCTTCCGACCGTCGCTCACACTCACGCCCACACTCAAACCAGTGCCAGCCATCGCTCACACCCGCCGCACGTTCACCGGCGCTACCAGATCCAAAGTACTAGAGCCTCGAACACCCACGCCAGAACAAAACCCACACAAAAATCATTCCAGATCTGAAGTATTGGAGCCTCGAAAATTGATTTCGAGCAATGCAGATTTGGGTGTTCCAGATCTGAACAAAACCCGCCCGTTCGCTCTTGAAATCGATTGTACAGATTTGGGTGTGAGCGACATGAGCAGTGCTTCGAAGGTACAAAACCCACATGAGCAGGGCCTCGAAAATCGATTACAAAACCCACACGAGCAGGGCCTCATAACTCTCCAAATCTGGCTGATTGCTCTTCGTTTCAGATCGGGCGGCGACTGCGAACGAGCTGCAAAGGGGGAGCGACGAACGGTGGTGAATGGTCTACAAACTTCAGTTTCAGAAGCGGACTTCAACGACAAACGGGCGACGGACTTCAGAGGCGGAGGGAAGGAAGAGGGGAGGAGAGAAAAGGAAAAAAAAGGAGAAAAAGTAAAGAAAAAATGCTAA

Protein sequence

MEALPPPSLFRPSLTLTPTLKPVPAIAHTRRTFTGATRSKVLEPRTPTPEQNPHKNHSRSEVLEPRKLISSNADLGVPDLNKTRPFALEIDCTDLGVSDMSSASKVQNPHEQGLENRLQNPHEQGLITLQIWLIALRFRSGGDCERAAKGERRTVVNGLQTSVSEADFNDKRATDFRGGGKEEGRREKEKKGEKVKKKC

Homology

The following BLAST results are available for this feature:

BLAST of Lag0008061 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0008061 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0008061 vs.


Match Name	E-value	Identity	Description

BLAST of Lag0008061 vs.


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 166..199
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 168..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 21..67
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 50..64
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..49

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0008061.1	Lag0008061.1	mRNA