Lag0008060 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0008060
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	upstream activation factor subunit UAF30-like
Location	chr9: 11124508 .. 11132014 (-)
RNA-Seq Expression	Lag0008060
Synteny	Lag0008060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTTTTGATTCTTTTGAAGATATTGGACATGCTCGAAGTAGCTAATCTATCTTTGGATGAACCAGATTTGGAGGCTGTGGTTTTTGATGAAGATGGTGGTAATAAAGAAGAGGATGTAATGGAAATTTGAGAGGATGACTTTAGTCTTTAGCTTTCTTTTTCTATGGAAAAGTGTTTTCATTTCCTAGTTTGTATTTGAAACATTGTTTTGTAACTTTGTTGAATCATGAATGTTGGTTAATGTATTTTGGATTATTCTCAAATCTCCATTGATTTGATATTTCATGCTTTTTAGTGGTGTACTTTTAGTATTTTTATGCTAAATTTATTTATATACTAAAAAAACAAAAAAAAAAAAACGTATCCTAAACGTGTCTGTCTTAGTTTTTTAGAAATTGACGTGTTGCCGTGTCTTACTGTGTCCGTGTCCGTGCTTCTTAGCTATTAAATTTCAGCTACCCCTCATTGAAGTTCATTGAAATATTCTCTTAATTTTTGTGGAGTAGGTAGTGGTGGAAGAAGTCTGGTCCATGCAAGAGATAAGTTCTTAGCCTAAAGATGGACTTTATATTTATCGGTAAACAAGAAGATTCTGGCCTTTGTTCCCTGCCAAAAAACCTCTGTTAGGGTTTAGGGTTTAGGGTTTAGGGTTTAGAGAAATCTTATAGATATTATTAGAATATTAGGAGGGCATATTAGTCAGTAGTAAGAGTTTGTTTGTTTGGGAAGTTAAGGGCAATTGGGTAGTTATGGGAACTTGGTTAGCTATGGGTACTTACAGGAAGTTATGCCTTGTGTTTAGTATATAATAACCTTGCAAGGAAAGGTGAAAACTAGCATGGATTATTTTGGAACTAGAATGGAGAGCTAAGACTTCTCAAATGTCTAAAGATGGGAGAGTGTTAGACTTTTTGAATGTCTGGGTAGGTTGTTACGTTCTCTTATATGCAATTACAACTATTTGTCTCAAGTCCTATCACTGACTTGCTGTTTCTAATGCCTTAATGTTGGGGAGAATCTTCACCATTTGTTCTTTCACTAATCTTATAGCAGGAACTTTTGGGAGACTTTGCTTCAGGGTTCTAAATTCCATGGCTAAAAACATTGTTTTGAATCTACTTTGTGGCCACGATCTAAGAGAGAGAGAAAAAGATTATGAATCAACAGTAACACTGCTGAATCTGTGGTGTGGGCATTTTGTTTGAAAGGAATCAATTACTATTTGAGAACAAATGAGTTTCTTGGGAGGAAAGATTTAAAATATTTAAGTACGACACAGCTTCATGGGTGCTCTTTCTGAAGACCTGCAAATATTCAACTTTTGAAAGTAATCTTGTTGGGGTTTCTTTTTTTGTAATTCTCTGATCAGATGGTGTTATTAGCTTTTGCTTCTGTTTTCTTGGTTTGGGGGTTTCTAGTTCCATTCTAAAGGGAGTTTTAGGTTATAACTTTTCATATATAGACGAATTGTTTCTTTTTTTTTTTTGTAAAAAAACGACTGTAGAAATTTCTATTTGAGAACATATTTAATGAATGAATTATTGTTCTTTGTAATGCAGTTCTAACAAGCTTAGTAAAGAGGCAAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCCCCACAATTGCAGGAATTTATAGGAGTTCCTGAACTGGCAAGAACTGAGGTACATCTAGAAAGTAATTTTTGACCCCTTTTTTTTCAGTCGTCTCAATATACCATTGAACATCACGTGTTGTCTTTTCCATTTCCTTCTAAAGCAATTATTGCTATCTTTGTTATAGGTTGTGAAGCAACTATGGAACCACATTAGAGAGAAGAATTTGCAAGATCCCAGTAATAGGAGAAATATTCTTTGTGATGAACCGTTAAAAGCACTCTTTGGTGTTAATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCATTGGAATCAAATGATGGTGTGCTTTTATAGCTTTGCTTTTGTGGCTAATATTATGTTATTGTTATATCAGATGTTTGGATTTGGACTTACCATTACTCTTAGTTGTTAAGTAAAAGCCGTTTCTTTTAGCTAATTATTGATGTCAATCTGGCTTCAATGGAACCTTTTGTGCTTTTTCTATACTGACTCTTGGATTTTCCTTTCTTGGATTTTCTTTTCTTCAATGTGTGTGTATATATATATATATATATATTATCCCAATAGGTACAACGTACAAGGACACTTATTTTATTATGTAAGAAAGTTTTGGTCTGCATGCACCCTGCTTAATGGCTAATGCCTGCCACTGCAAACTCTGAACTTTAGTCTGATGAAACTGAGCAACAAACCTTATTGAACTTTGTTTTTTTAAATATTTTCTTTTACCTGGATACAGTTATTCCCGCCAAATCAAGTCAGAAGGAAAAGCAACAAAAGGAGAAGCAGCAAAAGGAGAAGCCACAGAAGAAGCGGCAGAAGCAAGGAAAAGAAGAAGGTAGATGACAAAAATAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATTTGAAATTCAATGGCTGCGTTCATGATGGCAAGAAACCCCTTCATTGGAGTACTATAACAAAGTACCCAAAAATAAGACTTCTAAAATCATTATACAAATGCACCTCAATAAGATTCAGTGATATTAGTAGGATAAAATCTGAATTGTTCAGATAAAGTATACCAAGAAGCCACATAAAGTTTAATCAACTTGGATCTCTCTTCTTTCATCTTTGAAGATTCATTGGTTTCTTTCTAATCATATGCCCCACAAACTTGCTTAGACCCAATTAAGCCATACTTTTTTTTTGTTGAGTTCAAGAACATTTTGGAGGTGGAGAGATTCAAACCTCAGACCTCTTGGTCTGGGGATACATGCCAATTACTCTTGAGCTATGCTCACTTTTGACCATTAATCCATAATAATTTAGTACATCTTTTCATCCCATGGCCAGATAGCAATGCGGTTGTATTGCTTTTAGCTCCACCATTGGAAATCCAAGAAAAGCCAAGGCCAAATACCAGCCGAATACCAAATCCCTGATTTTACTGGTGCAAGAGAAAAAAAAATTAAGTGATCAGGGTTTTATTCTGCCTTCTTGCATAAGCATTACCAATTTGGACAAATTGCTAGATAGGGCACTTTTTCAACTACCTTTAAGCTAAATTTTGCCCTTCCAAGTACACTAAACACTAAATAGACCAAAAATATTTACTTTTTGTGGGACAGTTAGACTTCCATATAACTTCAATAAGACGTGTTGGGAGAGGAGGAGGACCCCTTGTCAATACTTTAAACAAAGGATTCATTGAGAAACTGTTAGGCCTCCGATAGTGAGAGCATATGAGATGAGAGTAAAGGAAAATTTATCTGAAAGTTAGCTAGAATAGACTGCATGAGTATATATGTTGGTTAGGGTGGCAAGAATGGCGTGAGACGAATTTTGTGGATAGTATGCCTAGGGGTGATAGGCTGACCCTCTCAAATTGGCTGCAAGTCTTGTATGGTGCTTTGTTCACCTCTTCCCTTCTGAATAAGAGTAATCTCAATGTTGTTACATATTCGAAACCTACAGGATCCAACACCTAAATTCCTTTATCTTTTCCTCTATTGATTGAAACTCTCTCAATCAACTGAAGAAGAGTGTAACAATCTTCTACTTCCTCATTCGTAAGATTTCTTCTTGTTGAAACTCTCCATGAACTAGGGTTTTCTTCTCATACTGAAAAAACTGATGCATTCTTTCTCTTTCCATTTTCTATCTTTATTAGAGAAAGTCTTTCAAAAGTAGCTTTGTCATAATGTTTCATCGAGGACTTCTTGAACATCCTGATTGTTTTCTCTTTCAGATGGAGCAGATGCTAAAGGTGGCTTCTAGTTCTAGACAACTTAGGCTCCTATACAGTCAACTCCTTTTCCTCCCATCTTATGAAGGGAGCAGTCCATCCATACTCCTTTTTGTGAATCTTTGAAATTCATCTCTTCCCAAGAAGAGTATATTCTTCTTTCGGTTGCTGAGTCTTCAGAGTCTGAATACTATAACTATATAGATAAAATCCAGAAAAGGAACCAAACTTCTACCTAAATCTAAACTGATGTGGCCTTTGTGGAATGATATTGGAGACAACTAGTTATCTTCTATCCTTGCTTGCACGGTCAGACTTGAGATCCAGATCCTTGGATGTCTTCCAACTTCAGCCTTCATCGTCTAGGTCAATCAGCAAGTAACTTGTTGATTTCTTCACCGGTTACAAGTTTGGTGCATAGAAAAGGAGTTCTCTGGATTAATATTTGTGCAACCTTTTTTTAGAAAATTTTTCTGGAACACCGTAGAAGAATTTTGAACTTAGAAAACCACCATCGAAATTTGGGATTCCATTGTGCTTCTAGCTTCCACTTGGTATATTAGAGCAAATCTTTTTTGTAATTATCTTTTACCATCTATACACCCCGATTTGATAACTTTTTTCCAACTCCTTTGGTGCCTTATTGTATTTCATTTGTGTATAGACAACTGTCTCTTATCTAAGACTAGGAAAAAGCATCCTGTTTTTTTTTTTTTATTTAGTAAACCACCGAAAGTGCTCTTCCCCATATAAGCTAATCACCACTCTGTGCCAAAGTATATTTTGTTAATTCAAGAACCTCTACAGCCATTTAGTCAACAAGGCATCATTCTTCCTTCTCATATTTCCTATTCCAACTTACCACACTCCTAAGGAGAAGAAACAAATTCCAACCCAACAAACGCCTTGTCCTTTTATCTACAATGTTTTCAACCAAAAAAAAAATCGTGGTTTTTCTTTCAACTTTGATGTCAATCTTCCACGGCATTAGAAAAAAATGACATATAATTGGAATTGGAAGATTTTATTTTTGATTTTTTTAAAAGGAAACAAAAAATTTGACTGAAATTGTAAAGTGTCTAGCAAGCTTATATGTAAATCCCATTAGGAGTAAATAAAAGAAACTCATTAAATAAAAAAAGAGCATTCAAACCCTAATCGAATATCAATTAAAAGAAAACAAGATTTGAATGGTTGACAATCATGAAGCGACAGAAATCTTTCTCCATGGTGTTCAAATGCCTTAGAAACAGTGAAGGAAACTTATTGGACAAAACTCACAAAGAAGCTAGCTGGAACAATACAAGAATTATTTCTTTCGTGTAAAAGTGTGGAAGGAATACTTCAAAAAGCCATGAAAGACAGCAAAAGCCTGCCAAACCACGGGAGCAATTGGCCCTTCTTTTGTTATTGTCTTTGCCACCAGGAGGATGCAAGTGGGGTATCTTCGTCACAATCAGTATTAATTCATAAAATAGTTGATTACGAAGCAGAAATTACAAGCATTCCACGCCTTTCAAGATGGTGGTTCTCTCCTTCCTTAGTATCCAAGGACCAAGATACAACTAACACAAAACATAACATAAGAAAACAAAGCATCCAACTAAACAGCCTTAAATACAAAAGACATGCTTAACAAAAGGACTTTCTCCCTACGGCTAAAAACAGTCACAGCCCCACTAAAGGGCAAATCCCCTTCTTACCCCTTCTAACATAAGTTTTTACTATCGGGGCCTAACAATGCACTACTCTTATTCATGGAGCTCTTACTGATTTCTCCATTTACTCTGTCTGTATTCCACATGCCCATTAATGGTTAAATCCATTGGAATAGCTCTTCATAGATCTCCTTTAGAAAGGTGCAAAGAGGAATGAGGGGAGTCACTTGGTTAATTGCTCATTTTCCCTTGATAGTAGCAAAGGACAACTCTATTTAACAAGATAGATGGCTCTATCTCTTCTTATAAAAAAAAAAAGATATTTGGCTCTGTCTCCCAGCCCCAGGATGGTGTCCTTGGTGTAAAAGGAACTCTGAATCCCAAGGACATCTTTTCAAACCTGGCTCCTTATCTAGAGAATTTTGGAACATCATGCTTCATACTTTGGTTGGCAGGTTATTCTCCTCATCAACATCAACCTTCTATCCTTGTTCCGTGAAGGCCACCCTTTTTAAAGAGAAAGGAAGATCTTATGGTTTCAATTTGAGAGAGCTTTTCTTTTGGCTTTTCTAACTTGAGAGAAACAATAGTTTTCATCAACAAAGAAAATTCTCCAGTGTTCTTTAGACTAAATCACTTTTGTAGCTCTTTATTTGTGTAAATTTTGTGCCCTTTTGGTACTTACAATTCAAATTCTCTTTGTGCCATGTGGAAGAGTTTTTGTTTTCTTGTTTTCTTTTTGTTTTTTTTTTTTTTTTTGACTTAGGGTTTGCCTTTCCCTTCTCTCTTTCACATTATTATTTTAGCATTTATTTAAAATTTTTTAATTCTATACTATGGATTTTTTCTCACAAAAATAGCCGGTTAATCTTTATTCCTTGAAAGCTCGACCAAGAGGGTGAGCTGAGCTCCAAGCAATATTAAATCTGTTAACTGACCTTACAATGTAGAAAGAGATGGTTAAGATCCCATGCTTTCTACACATTGTATACCGTTTTTTGGGTTAGAGAGATAATGTCTTAATGAATGCTTGCATCCTGTCATTTGTGCTCAAACTTTCTAGAAAAAGAGGTCATTATAAGAGTTTGATCTTTTAGGTAATTTTTCTTCTCCAAAATGCATTTGGGAACGTGTCTAGGATTTGCCGATTAGGAGCTAGCAAGGTAGAGAAGGGACTTACTAGAAAAGGTTCCACCTTTTGTCAAACTCGCAAGTCTTGTCTTCCCTTGTGGACAATCTGCAGGTACTGATTTTTGCACAAGATCCAGGAAGTGAGGTATTTCCTCATCCTGTGGGTTTCGTCTGAAATCTAAATTTTAAGCCAAGGTATCTTGATCCCAACAATTGGCGATCTATCTACTTACCCTCCCCCCAAGTAAAATAAAAAGAAAAAGAGAAAGAAATTGAGCAATTACAGTTTATTAACCATAACATTATATAGTCCAGTTACCCTTGGTTATCAACCAAAAAAGGAAGTTTCTTTGTTTCCACCAGCTATAAGAACAAGTACTACTGTGATGCTTTTTTAACAATCTTTTTCTAGAGAAAAAGAAATCCAAACTCATGTAGACAACATGTTTAGAACTAGGCCTCATCTTAAATGGGAAAAGGACACTACCTTTAGTAAATTGCCAACCTTAATTGCTTCAGAATGAAGTAGAAAAGATGTAAAATTTTTTAAATTATTCTTTTTCCAGTTTACAGCCAACTGAAGGTTCTACTAGTATCTAATAAACCTTCTTCTTTCCAGATTCAGATGACTCTGCAAAAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCACTTCAACTTTCGGATGCTCTGGTGGCATTTCTTGGTACTGGAGAGAATGCATTGCCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAACAACCTTCAGGTAGTTGGTCTTTGGAAAGATTCTTTGATACTATAG

mRNA sequence

ATGCTTTTGATTCTTTTGAAGATATTGGACATGCTCGAAGTAGCTAATCTATCTTTGGATGAACCAGATTTGGAGGCTGTGGTTTTTGATGAAGATGGTGGAACTTTTGGGAGACTTTGCTTCAGGGTTCTAAATTCCATGGCTAAAAACATTGTTTTGAATCTACTTTGTGGCCACGATCTAAGAGAGAGAGAAAAAGATTATGAATCAACAGTAACACTGCTGAATCTGTGTTCTAACAAGCTTAGTAAAGAGGCAAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCCCCACAATTGCAGGAATTTATAGGAGTTCCTGAACTGGCAAGAACTGAGGTTGTGAAGCAACTATGGAACCACATTAGAGAGAAGAATTTGCAAGATCCCAGTAATAGGAGAAATATTCTTTGTGATGAACCGTTAAAAGCACTCTTTGGTGTTAATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCATTGGAATCAAATGATGTTATTCCCGCCAAATCAAGTCAGAAGGAAAAGCAACAAAAGGAGAAGCAGCAAAAGGAGAAGCCACAGAAGAAGCGGCAGAAGCAAGGAAAAGAAGAAGATTCAGATGACTCTGCAAAAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCACTTCAACTTTCGGATGCTCTGGTGGCATTTCTTGGTACTGGAGAGAATGCATTGCCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAACAACCTTCAGGTAGTTGGTCTTTGGAAAGATTCTTTGATACTATAG

Coding sequence (CDS)

ATGCTTTTGATTCTTTTGAAGATATTGGACATGCTCGAAGTAGCTAATCTATCTTTGGATGAACCAGATTTGGAGGCTGTGGTTTTTGATGAAGATGGTGGAACTTTTGGGAGACTTTGCTTCAGGGTTCTAAATTCCATGGCTAAAAACATTGTTTTGAATCTACTTTGTGGCCACGATCTAAGAGAGAGAGAAAAAGATTATGAATCAACAGTAACACTGCTGAATCTGTGTTCTAACAAGCTTAGTAAAGAGGCAAAGAAAAGAGGAGGGGGTGGTTTTAGCAAGCTATGTAGCCTTTCCCCACAATTGCAGGAATTTATAGGAGTTCCTGAACTGGCAAGAACTGAGGTTGTGAAGCAACTATGGAACCACATTAGAGAGAAGAATTTGCAAGATCCCAGTAATAGGAGAAATATTCTTTGTGATGAACCGTTAAAAGCACTCTTTGGTGTTAATTCCATCAACATGTTTCAAATGAATAAAGCTCTATCAAAGCATATTTGGCCATTGGAATCAAATGATGTTATTCCCGCCAAATCAAGTCAGAAGGAAAAGCAACAAAAGGAGAAGCAGCAAAAGGAGAAGCCACAGAAGAAGCGGCAGAAGCAAGGAAAAGAAGAAGATTCAGATGACTCTGCAAAAGAGGAAAAGCGGCAAAAGAAAGGGAAATCTGGTTTTCTTGCTCCACTTCAACTTTCGGATGCTCTGGTGGCATTTCTTGGTACTGGAGAGAATGCATTGCCTCGCTCTGATGTAGTGAAAAGAATGTGGGATTACATAAAGCAAAACAACCTTCAGGTAGTTGGTCTTTGGAAAGATTCTTTGATACTATAG

Protein sequence

MLLILLKILDMLEVANLSLDEPDLEAVVFDEDGGTFGRLCFRVLNSMAKNIVLNLLCGHDLREREKDYESTVTLLNLCSNKLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKPQKKRQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDYIKQNNLQVVGLWKDSLIL

Homology

[Close]

BLAST of Lag0008060 vs. NCBI nr
Match: XP_038901462.1 (protein TRI1-like isoform X3 [Benincasa hispida])

HSP 1 Score: 345.1 bits (884), Expect = 5.5e-91
Identity = 182/203 (89.66%), Postives = 189/203 (93.10%), Query Frame = 0


Query: 79  SNKLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRR 138
           SNKLSKE KKRGGGGFSKLCSLSPQLQEFIG PE+ARTEVVKQLWNHIR KNLQDPSNRR
Sbjct: 108 SNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRGKNLQDPSNRR 167

Query: 139 NILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKPQ 198
           NILCD+ LKALFGVNSINMFQMNKALSKHIWPLESNDVIPA SSQKEKQQKEKQ KEKPQ
Sbjct: 168 NILCDDSLKALFGVNSINMFQMNKALSKHIWPLESNDVIPANSSQKEKQQKEKQPKEKPQ 227

Query: 199 KKRQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMW 258
           KKRQKQGKEEDSDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGE+ALPRSDVVKRMW
Sbjct: 228 KKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMW 287

Query: 259 DYIKQNNLQVV---GLWKDSLIL 279
           DYIKQNNLQV    G W+  ++L
Sbjct: 288 DYIKQNNLQVAKIPGKWRMPIVL 310

[Close]

BLAST of Lag0008060 vs. NCBI nr
Match: XP_038901461.1 (protein TRI1-like isoform X2 [Benincasa hispida])

HSP 1 Score: 344.0 bits (881), Expect = 1.2e-90
Identity = 179/195 (91.79%), Postives = 187/195 (95.90%), Query Frame = 0


Query: 79  SNKLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRR 138
           SNKLSKE KKRGGGGFSKLCSLSPQLQEFIG PE+ARTEVVKQLWNHIR KNLQDPSNRR
Sbjct: 108 SNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRGKNLQDPSNRR 167

Query: 139 NILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKPQ 198
           NILCD+ LKALFGVNSINMFQMNKALSKHIWPLESNDVIPA SSQKEKQQKEKQ KEKPQ
Sbjct: 168 NILCDDSLKALFGVNSINMFQMNKALSKHIWPLESNDVIPANSSQKEKQQKEKQPKEKPQ 227

Query: 199 KKRQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMW 258
           KKRQKQGKEEDSDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGE+ALPRSDVVKRMW
Sbjct: 228 KKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMW 287

Query: 259 DYIKQNNLQVVGLWK 274
           DYIKQNNLQ+V +++
Sbjct: 288 DYIKQNNLQIVDIFE 302

[Close]

BLAST of Lag0008060 vs. NCBI nr
Match: XP_038901460.1 (upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida])

HSP 1 Score: 340.1 bits (871), Expect = 1.8e-89
Identity = 178/189 (94.18%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 79  SNKLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRR 138
           SNKLSKE KKRGGGGFSKLCSLSPQLQEFIG PE+ARTEVVKQLWNHIR KNLQDPSNRR
Sbjct: 108 SNKLSKEGKKRGGGGFSKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRGKNLQDPSNRR 167

Query: 139 NILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKPQ 198
           NILCD+ LKALFGVNSINMFQMNKALSKHIWPLESNDVIPA SSQKEKQQKEKQ KEKPQ
Sbjct: 168 NILCDDSLKALFGVNSINMFQMNKALSKHIWPLESNDVIPANSSQKEKQQKEKQPKEKPQ 227

Query: 199 KKRQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMW 258
           KKRQKQGKEEDSDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGE+ALPRSDVVKRMW
Sbjct: 228 KKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGEDALPRSDVVKRMW 287

Query: 259 DYIKQNNLQ 268
           DYIKQNNLQ
Sbjct: 288 DYIKQNNLQ 296

[Close]

BLAST of Lag0008060 vs. NCBI nr
Match: XP_008457882.1 (PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo])

HSP 1 Score: 326.2 bits (835), Expect = 2.7e-85
Identity = 171/187 (91.44%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 81  KLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNI 140
           K S +  K+ GGGFSKLCSLSPQLQEFIG  E+ARTEVVKQLWNHIRE NLQDPSNRRNI
Sbjct: 105 KTSSDKAKKRGGGFSKLCSLSPQLQEFIGATEMARTEVVKQLWNHIRENNLQDPSNRRNI 164

Query: 141 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKPQKK 200
           LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQ KEKPQKK
Sbjct: 165 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQPKEKPQKK 224

Query: 201 RQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDY 260
           RQKQGKEEDSDDSA+E+KRQKKGKSGFLAPL LSDALVAFLGTGE+ALPRSDVVKRMWDY
Sbjct: 225 RQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSDALVAFLGTGEDALPRSDVVKRMWDY 284

Query: 261 IKQNNLQ 268
           IKQNNLQ
Sbjct: 285 IKQNNLQ 291

[Close]

BLAST of Lag0008060 vs. NCBI nr
Match: TYK13709.1 (upstream activation factor subunit UAF30-like [Cucumis melo var. makuwa])

HSP 1 Score: 326.2 bits (835), Expect = 2.7e-85
Identity = 171/187 (91.44%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 81  KLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNI 140
           K S +  K+ GGGFSKLCSLSPQLQEFIG  E+ARTEVVKQLWNHIRE NLQDPSNRRNI
Sbjct: 105 KTSSDKAKKRGGGFSKLCSLSPQLQEFIGATEMARTEVVKQLWNHIRENNLQDPSNRRNI 164

Query: 141 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKPQKK 200
           LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQ KEKPQKK
Sbjct: 165 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQPKEKPQKK 224

Query: 201 RQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDY 260
           RQKQGKEEDSDDSA+E+KRQKKGKSGFLAPL LSDALVAFLGTGE+ALPRSDVVKRMWDY
Sbjct: 225 RQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSDALVAFLGTGEDALPRSDVVKRMWDY 284

Query: 261 IKQNNLQ 268
           IKQNNLQ
Sbjct: 285 IKQNNLQ 291

[Close]

BLAST of Lag0008060 vs. ExPASy Swiss-Prot
Match: Q05024 (Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TRI1 PE=1 SV=1)

HSP 1 Score: 83.2 bits (204), Expect = 5.1e-15
Identity = 51/134 (38.06%), Postives = 78/134 (58.21%), Query Frame = 0


Query: 62  REREKDYESTVTLLNLCSNKLSKEAKKRGGGGFSKLCS-----LSPQLQEFIGVPELART 121
           +E E+   ST        +K SK  KK+     S   S     LS  LQ+F+G  EL RT
Sbjct: 84  KEEERPLRSTRKRKGKSESK-SKRKKKKNDSPDSNSISVRKVLLSAPLQKFLGSEELPRT 143

Query: 122 EVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDV 181
           +VVK +W +I+E +LQ+P +RR ILCDE ++ +FG   + MF MNK L+KH++    +++
Sbjct: 144 QVVKMIWQYIKEHDLQNPKDRREILCDEKMEPIFG-KKMTMFSMNKLLTKHLF--NPDEI 203

Query: 182 IPAKSSQKEKQQKE 191
           +  +  QK+  +KE
Sbjct: 204 VKHEEEQKQTPEKE 213

[Close]

BLAST of Lag0008060 vs. ExPASy Swiss-Prot
Match: O74503 (Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=spp27 PE=1 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 2.4e-12
Identity = 42/111 (37.84%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 95  SKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNS 154
           +K   LSP+L EF+G+ +L+R + VK+LW +I+  +LQDP+++R ILCD+ LK++F V++
Sbjct: 118 NKPMKLSPKLAEFLGLEQLSRPQTVKKLWEYIKAHDLQDPNDKRTILCDDKLKSVFEVDT 177

Query: 155 INMFQMNKALSKHIWPLESNDVIPAKSSQKEK--------QQKEKQQKEKP 198
           ++MF MNK L+  +  +  +D +P    + E+        +Q+EK+  E P
Sbjct: 178 LHMFTMNKYLTNLMTKI-PDDQLPKPQPKNEEPAAPNDLPKQEEKELVEPP 227

[Close]

BLAST of Lag0008060 vs. ExPASy Swiss-Prot
Match: Q08747 (Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=UAF30 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.7e-10
Identity = 42/99 (42.42%), Postives = 61/99 (61.62%), Query Frame = 0


Query: 99  SLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMF 158
           +LS  L   +G  EL RTEVV++LW +I+  NLQ+P+N++ ILCDE L+ + G  S NMF
Sbjct: 125 TLSKSLASLLGEHELTRTEVVRRLWAYIKAHNLQNPNNKKEILCDEKLELILG-KSTNMF 184

Query: 159 QMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKP 198
           +M+K L+ H+         P K S      +E ++KEKP
Sbjct: 185 EMHKILASHM-------TEPKKISDCPPLIQEVRRKEKP 215

[Close]

BLAST of Lag0008060 vs. ExPASy Swiss-Prot
Match: Q9SD34 (Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN=At3g51120 PE=2 SV=3)

HSP 1 Score: 53.5 bits (127), Expect = 4.4e-06
Identity = 38/130 (29.23%), Postives = 58/130 (44.62%), Query Frame = 0


Query: 45  NSMAKNIVLNLLCGHDLREREKDYESTVTLLNLCSNKLSKEAKKRGGGGFSKLCSLSPQL 104
           N    N  L++      R R  D   + TL N    K      K+  G  S     + +L
Sbjct: 271 NDHTNNRALDVAVNGTKRRRTSD---SPTLPNKLDGKNPSNILKKAPGDTS---WATKEL 330

Query: 105 QEFIGVPELARTEVVKQ------LWNHIREKNLQDPSNRRNILCDEPLKALFGVNSINMF 164
            EF+   +   T V+ Q      L ++I++KNL+DP  +  +LCD+ L  LFG   +  F
Sbjct: 331 LEFVSFMKNGDTSVLSQFDVQGLLLDYIKKKNLRDPLQKSQVLCDQMLVKLFGKQRVGHF 390

Query: 165 QMNKALSKHI 169
           +M K L  H+
Sbjct: 391 EMLKLLESHV 394

[Close]

BLAST of Lag0008060 vs. ExPASy TrEMBL
Match: A0A5D3CU37 (Upstream activation factor subunit UAF30-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold299G002330 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.3e-85
Identity = 171/187 (91.44%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 81  KLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNI 140
           K S +  K+ GGGFSKLCSLSPQLQEFIG  E+ARTEVVKQLWNHIRE NLQDPSNRRNI
Sbjct: 105 KTSSDKAKKRGGGFSKLCSLSPQLQEFIGATEMARTEVVKQLWNHIRENNLQDPSNRRNI 164

Query: 141 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKPQKK 200
           LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQ KEKPQKK
Sbjct: 165 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQPKEKPQKK 224

Query: 201 RQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDY 260
           RQKQGKEEDSDDSA+E+KRQKKGKSGFLAPL LSDALVAFLGTGE+ALPRSDVVKRMWDY
Sbjct: 225 RQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSDALVAFLGTGEDALPRSDVVKRMWDY 284

Query: 261 IKQNNLQ 268
           IKQNNLQ
Sbjct: 285 IKQNNLQ 291

[Close]

BLAST of Lag0008060 vs. ExPASy TrEMBL
Match: A0A1S3C766 (upstream activation factor subunit UAF30-like OS=Cucumis melo OX=3656 GN=LOC103497460 PE=4 SV=1)

HSP 1 Score: 326.2 bits (835), Expect = 1.3e-85
Identity = 171/187 (91.44%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 81  KLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNI 140
           K S +  K+ GGGFSKLCSLSPQLQEFIG  E+ARTEVVKQLWNHIRE NLQDPSNRRNI
Sbjct: 105 KTSSDKAKKRGGGFSKLCSLSPQLQEFIGATEMARTEVVKQLWNHIRENNLQDPSNRRNI 164

Query: 141 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKPQKK 200
           LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQ KEKPQKK
Sbjct: 165 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQPKEKPQKK 224

Query: 201 RQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDY 260
           RQKQGKEEDSDDSA+E+KRQKKGKSGFLAPL LSDALVAFLGTGE+ALPRSDVVKRMWDY
Sbjct: 225 RQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSDALVAFLGTGEDALPRSDVVKRMWDY 284

Query: 261 IKQNNLQ 268
           IKQNNLQ
Sbjct: 285 IKQNNLQ 291

[Close]

BLAST of Lag0008060 vs. ExPASy TrEMBL
Match: A0A0A0LJW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G295440 PE=4 SV=1)

HSP 1 Score: 324.7 bits (831), Expect = 3.7e-85
Identity = 170/187 (90.91%), Postives = 177/187 (94.65%), Query Frame = 0


Query: 81  KLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNI 140
           K S E  K+ GGGF+KLCSLSPQLQEFIG PE+ARTEVVKQLWNHIRE NLQDPSNRRNI
Sbjct: 105 KTSSEKVKKRGGGFTKLCSLSPQLQEFIGAPEMARTEVVKQLWNHIRENNLQDPSNRRNI 164

Query: 141 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKPQKK 200
           LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEK QKEKQ KEKPQKK
Sbjct: 165 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKPQKEKQPKEKPQKK 224

Query: 201 RQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDY 260
           RQKQGKEEDSDDSA+E+KRQKKGKSGFLAPL LS+ALVAFLGTGE+ALPRSDVVKRMWDY
Sbjct: 225 RQKQGKEEDSDDSAREDKRQKKGKSGFLAPLPLSNALVAFLGTGEDALPRSDVVKRMWDY 284

Query: 261 IKQNNLQ 268
           IKQNNLQ
Sbjct: 285 IKQNNLQ 291

[Close]

BLAST of Lag0008060 vs. ExPASy TrEMBL
Match: A0A6J1EMX5 (upstream activation factor subunit UAF30-like OS=Cucurbita moschata OX=3662 GN=LOC111434984 PE=4 SV=1)

HSP 1 Score: 320.5 bits (820), Expect = 7.1e-84
Identity = 175/194 (90.21%), Postives = 180/194 (92.78%), Query Frame = 0


Query: 79  SNKLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRR 138
           SNKL   AKKRGGGGFSKLCSLSPQLQEFIGVPE+ARTEVVKQLWNHIR  NLQDPSNRR
Sbjct: 108 SNKL---AKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRR 167

Query: 139 NILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQ----- 198
           NILCDE LKALF V+SINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQ+     
Sbjct: 168 NILCDESLKALFCVDSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQEKEKQP 227

Query: 199 KEKPQKKRQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDV 258
           KEKPQKKRQKQGKEEDSDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGE+AL RSDV
Sbjct: 228 KEKPQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGESALSRSDV 287

Query: 259 VKRMWDYIKQNNLQ 268
           VKRMWDYIKQNNLQ
Sbjct: 288 VKRMWDYIKQNNLQ 298

[Close]

BLAST of Lag0008060 vs. ExPASy TrEMBL
Match: A0A6J1I6I7 (upstream activation factor subunit spp27-like OS=Cucurbita maxima OX=3661 GN=LOC111470389 PE=4 SV=1)

HSP 1 Score: 315.5 bits (807), Expect = 2.3e-82
Identity = 173/194 (89.18%), Postives = 178/194 (91.75%), Query Frame = 0


Query: 79  SNKLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRR 138
           SNKL   AKKRGGGGFSKLCSLSPQLQEFIGVPE+ARTEVVKQLWNHIR  NLQDPSNRR
Sbjct: 108 SNKL---AKKRGGGGFSKLCSLSPQLQEFIGVPEMARTEVVKQLWNHIRGNNLQDPSNRR 167

Query: 139 NILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQK-----EKQQKEKQQ 198
           NILCDE LKALF V+SINMFQMNKALSKHIWPLESNDVIPAKSSQK     EKQ+KEKQ 
Sbjct: 168 NILCDESLKALFRVDSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKKQQEKQEKEKQP 227

Query: 199 KEKPQKKRQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDV 258
           KEK QKKRQKQGKEEDSDDSA+EEKRQKKGKSGFLAPLQLSDALV FLGTGEN+L RSDV
Sbjct: 228 KEKLQKKRQKQGKEEDSDDSAREEKRQKKGKSGFLAPLQLSDALVTFLGTGENSLSRSDV 287

Query: 259 VKRMWDYIKQNNLQ 268
           VKRMWDYIKQNNLQ
Sbjct: 288 VKRMWDYIKQNNLQ 298

[Close]

BLAST of Lag0008060 vs. TAIR 10
Match: AT3G19080.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 184.1 bits (466), Expect = 1.5e-46
Identity = 101/187 (54.01%), Postives = 133/187 (71.12%), Query Frame = 0


Query: 81  KLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNI 140
           K  ++ K++GGGGF+K+CSLSP+LQ F GV ELARTEVVK LW +I+E NLQDP+++R+I
Sbjct: 251 KSVEKPKRKGGGGFAKVCSLSPELQAFTGVTELARTEVVKLLWKYIKENNLQDPNDKRSI 310

Query: 141 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQKEKQQKEKPQKK 200
           +CDE  ++LF V SINMFQMNK L+KHIWPLE N               E    + P+  
Sbjct: 311 ICDESFRSLFPVESINMFQMNKQLTKHIWPLEDN-------------AGESVSSKSPKNG 370

Query: 201 RQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALPRSDVVKRMWDY 260
           +QK   + DS++  +++K+QKK     LAPL LSDALV FLG GEN+L R+DVVKR+W+Y
Sbjct: 371 KQKMESDGDSEEPNEKDKKQKK---EVLAPLPLSDALVKFLGDGENSLSRADVVKRLWEY 421

Query: 261 IKQNNLQ 268
           I  N+LQ
Sbjct: 431 INHNDLQ 421

[Close]

BLAST of Lag0008060 vs. TAIR 10
Match: AT1G49520.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 152.9 bits (385), Expect = 3.8e-37
Identity = 96/203 (47.29%), Postives = 129/203 (63.55%), Query Frame = 0


Query: 81  KLSKEAKKRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNI 140
           +L  +AKKR GGGF+K+C LSPQL++F+G  +LARTEVVK++W +IRE +LQDP+NRRNI
Sbjct: 90  ELPVKAKKR-GGGFNKICQLSPQLEKFLGTSQLARTEVVKKMWAYIREHDLQDPTNRRNI 149

Query: 141 LCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVI-------PAKSSQKEKQQKEKQQ 200
           LCDE L +LF V +INMFQMNKAL+KHIW L   D             +  E+ +K+ + 
Sbjct: 150 LCDESLHSLFRVKTINMFQMNKALAKHIWALNDGDGCFKNVKEEDVDETSGERDEKDVKI 209

Query: 201 KEKPQKKRQKQGKEEDSD---------DSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTG 260
           +E  +   ++  +EED             AK E++ KK   GF     LS  L AF GT 
Sbjct: 210 EEALENNEEESREEEDRSVRKRKRKKRKPAKSEEKPKKKGGGFTKVCSLSPELQAFTGTP 269

Query: 261 ENALPRSDVVKRMWDYIKQNNLQ 268
           +  L R++VVK +W YIK+NNLQ
Sbjct: 270 Q--LARTEVVKMLWKYIKENNLQ 289

[Close]

BLAST of Lag0008060 vs. TAIR 10
Match: AT4G22360.1 (SWIB complex BAF60b domain-containing protein )

HSP 1 Score: 129.4 bits (324), Expect = 4.4e-30
Identity = 73/198 (36.87%), Postives = 116/198 (58.59%), Query Frame = 0


Query: 76  NLCSNKLSKEA-----KKRGG-GGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREK 135
           +L  N+  KE+     K++GG GG +K+C +SP+L+  +G P L RTE+V+QLW +IR+ 
Sbjct: 173 SLSVNQAPKESAPAGTKRKGGPGGLNKVCRVSPELEVVVGEPALPRTEIVRQLWAYIRKN 232

Query: 136 NLQDPSNRRNILCDEPLKALFGVNSINMFQMNKALSKHIWPLESNDVIPAKSSQKEKQQK 195
           NLQDPSN+R I+CD+ L+ +F  +  +MF+MNK L+KHI PL+     P+K S + K+ K
Sbjct: 233 NLQDPSNKRKIICDDALRVVFETDCTDMFKMNKLLAKHILPLD-----PSKDSGQAKKAK 292

Query: 196 EKQQKEKPQKKRQKQGKEEDSDDSAKEEKRQKKGKSGFLAPLQLSDALVAFLGTGENALP 255
                               ++   K E  +    +   + + LS+ L  F GTGE  + 
Sbjct: 293 --------------------TEVETKTETTEPISSTAISSTVTLSEPLGKFFGTGETEMA 345

Query: 256 RSDVVKRMWDYIKQNNLQ 268
             ++++R+W+YIK NNL+
Sbjct: 353 DEEIIRRVWEYIKLNNLE 345

[Close]

BLAST of Lag0008060 vs. TAIR 10
Match: AT2G14880.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 1.7e-13
Identity = 33/81 (40.74%), Postives = 54/81 (66.67%), Query Frame = 0


Query: 88  KRGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLK 147
           KR   G  K   +SP++Q+ + +PE+ART+ +K++W +I+E +LQDP N+R ILCDE LK
Sbjct: 59  KRVPRGIMKPRPVSPEMQDIVELPEIARTQALKRIWAYIKEHDLQDPQNKREILCDEKLK 118

Query: 148 ALF-GVNSINMFQMNKALSKH 168
            +F G + +   ++ K +  H
Sbjct: 119 KIFEGRDRVGFLEIAKLIGPH 139

[Close]

BLAST of Lag0008060 vs. TAIR 10
Match: AT2G35605.1 (SWIB/MDM2 domain superfamily protein )

HSP 1 Score: 73.9 bits (180), Expect = 2.2e-13
Identity = 35/80 (43.75%), Postives = 53/80 (66.25%), Query Frame = 0


Query: 89  RGGGGFSKLCSLSPQLQEFIGVPELARTEVVKQLWNHIREKNLQDPSNRRNILCDEPLKA 148
           R G G  K+  +S  L  FIG  E++RT  VK++W +I+  NLQ+P N+R ILCDE LK 
Sbjct: 25  RQGTGILKVVPVSKPLANFIGENEVSRTTAVKKIWEYIKLNNLQNPVNKREILCDEQLKT 84

Query: 149 LF-GVNSINMFQMNKALSKH 168
           +F G +++   +++K LS+H
Sbjct: 85  IFSGKDTVGFLEISKLLSQH 104

The following BLAST results are available for this feature:

BLAST of Lag0008060 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038901462.1	5.5e-91	89.66	protein TRI1-like isoform X3 [Benincasa hispida]	[more]
XP_038901461.1	1.2e-90	91.79	protein TRI1-like isoform X2 [Benincasa hispida]	[more]
XP_038901460.1	1.8e-89	94.18	upstream activation factor subunit spp27-like isoform X1 [Benincasa hispida]	[more]
XP_008457882.1	2.7e-85	91.44	PREDICTED: upstream activation factor subunit UAF30-like [Cucumis melo]	[more]
TYK13709.1	2.7e-85	91.44	upstream activation factor subunit UAF30-like [Cucumis melo var. makuwa]	[more]

BLAST of Lag0008060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q05024	5.1e-15	38.06	Protein TRI1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 ...	[more]
O74503	2.4e-12	37.84	Upstream activation factor subunit spp27 OS=Schizosaccharomyces pombe (strain 97...	[more]
Q08747	1.7e-10	42.42	Upstream activation factor subunit UAF30 OS=Saccharomyces cerevisiae (strain ATC...	[more]
Q9SD34	4.4e-06	29.23	Zinc finger CCCH domain-containing protein 44 OS=Arabidopsis thaliana OX=3702 GN...	[more]

BLAST of Lag0008060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CU37	1.3e-85	91.44	Upstream activation factor subunit UAF30-like OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3C766	1.3e-85	91.44	upstream activation factor subunit UAF30-like OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0A0LJW7	3.7e-85	90.91	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G295440 PE=4 SV=1	[more]
A0A6J1EMX5	7.1e-84	90.21	upstream activation factor subunit UAF30-like OS=Cucurbita moschata OX=3662 GN=L...	[more]
A0A6J1I6I7	2.3e-82	89.18	upstream activation factor subunit spp27-like OS=Cucurbita maxima OX=3661 GN=LOC...	[more]

BLAST of Lag0008060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19080.1	1.5e-46	54.01	SWIB complex BAF60b domain-containing protein	[more]
AT1G49520.1	3.8e-37	47.29	SWIB complex BAF60b domain-containing protein	[more]
AT4G22360.1	4.4e-30	36.87	SWIB complex BAF60b domain-containing protein	[more]
AT2G14880.1	1.7e-13	40.74	SWIB/MDM2 domain superfamily protein	[more]
AT2G35605.1	2.2e-13	43.75	SWIB/MDM2 domain superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 189..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 179..225
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..224
None	No IPR available	PANTHER	PTHR13844	SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY D	coord: 78..267
None	No IPR available	PANTHER	PTHR13844:SF53	SWIB COMPLEX BAF60B DOMAIN-CONTAINING PROTEIN	coord: 78..267
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 98..168 e-value: 1.07205E-37 score: 125.734
None	No IPR available	CDD	cd10567	SWIB-MDM2_like	coord: 231..267 e-value: 1.39054E-12 score: 59.8645
IPR019835	SWIB domain	SMART	SM00151	swib_2	coord: 94..173 e-value: 3.7E-36 score: 136.1 coord: 227..274 e-value: 0.044 score: 2.9
IPR003121	SWIB/MDM2 domain	PFAM	PF02201	SWIB	coord: 97..168 e-value: 5.5E-30 score: 103.0 coord: 230..267 e-value: 1.0E-9 score: 38.1
IPR003121	SWIB/MDM2 domain	PROSITE	PS51925	SWIB_MDM2	coord: 93..170 score: 23.059763
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 88..176 e-value: 6.1E-32 score: 111.3
IPR036885	SWIB/MDM2 domain superfamily	GENE3D	1.10.245.10	SWIB/MDM2 domain	coord: 220..270 e-value: 6.6E-12 score: 47.3
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 92..172
IPR036885	SWIB/MDM2 domain superfamily	SUPERFAMILY	47592	SWIB/MDM2 domain	coord: 223..267

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0008060.1	Lag0008060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus