Sequences
The following sequences are available for this feature:
Legend: polypeptide exon CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCTGTGGAAATGGCCAAATTAGTAGGAGGGTCAATAGGTGAGGTGGAGGAAGTAGATTGGGATGAGGTAGGCAGGTGGTCGGGGCGAGTGATGAGAATCAGAATAATGGTTGACATCACTAGTCCTCTTCAGAGGGAAGTTAAGATTAAAACGAAGGAGGAAATGAG AGAATGTCAGGTAGCTCTGGCGGAGGATAGTGGGAAGGGTGAGTTTATGTATG GAGGGATTAATGCGGGGGCTGATATGGTAGGGGAAGGCTCGGGAGGGGTGAAGGAGAAGGGAGCCACTAGTAAGGCCCCTACCAATGATAAAGTGGCCGGTGGGAGGAAGTGGAAAAGGATGGCAAGGGAGGAAGGGGGTGGTATGGTACTGGGAAATGGGGTTGGTTTGGGGAAGCTCGTTGTCTCCCTAGAGTCGAGTATTGGAGGGCTGGAGGCTTGGGAGGAACCGTTGAGGAAGAAGAATAAGGATGGTCGAGGCATTGTTGTTGATGAAATGATATCGGCGAACCTTGGGGATTAG
ATGTCTGTGGAAATGGCCAAATTAGTAGGAGGGTCAATAGGTGAGGTGGAGGAAGTAGATTGGGATGAGGTAGGCAGGTGGTCGGGGCGAGTGATGAGAATCAGAATAATGGTTGACATCACTAGTCCTCTTCAGAGGGAAGTTAAGATTAAAACGAAGGAGGAAATGAGAGAATGTCAGGTAGCTCTGGCGGAGGATAGTGGGAAGGGTGAGTTTATGTATGGAGGGATTAATGCGGGGGCTGATATGGTAGGGGAAGGCTCGGGAGGGGTGAAGGAGAAGGGAGCCACTAGTAAGGCCCCTACCAATGATAAAGTGGCCGGTGGGAGGAAGTGGAAAAGGATGGCAAGGGAGGAAGGGGGTGGTATGGTACTGGGAAATGGGGTTGGTTTGGGGAAGCTCGTTGTCTCCCTAGAGTCGAGTATTGGAGGGCTGGAGGCTTGGGAGGAACCGTTGAGGAAGAAGAATAAGGATGGTCGAGGCATTGTTGTTGATGAAATGATATCGGCGAACCTTGGGGATTAG
ATGTCTGTGGAAATGGCCAAATTAGTAGGAGGGTCAATAGGTGAGGTGGAGGAAGTAGATTGGGATGAGGTAGGCAGGTGGTCGGGGCGAGTGATGAGAATCAGAATAATGGTTGACATCACTAGTCCTCTTCAGAGGGAAGTTAAGATTAAAACGAAGGAGGAAATGAGAGAATGTCAGGTAGCTCTGGCGGAGGATAGTGGGAAGGGTGAGTTTATGTATGGAGGGATTAATGCGGGGGCTGATATGGTAGGGGAAGGCTCGGGAGGGGTGAAGGAGAAGGGAGCCACTAGTAAGGCCCCTACCAATGATAAAGTGGCCGGTGGGAGGAAGTGGAAAAGGATGGCAAGGGAGGAAGGGGGTGGTATGGTACTGGGAAATGGGGTTGGTTTGGGGAAGCTCGTTGTCTCCCTAGAGTCGAGTATTGGAGGGCTGGAGGCTTGGGAGGAACCGTTGAGGAAGAAGAATAAGGATGGTCGAGGCATTGTTGTTGATGAAATGATATCGGCGAACCTTGGGGATTAG
MSVEMAKLVGGSIGEVEEVDWDEVGRWSGRVMRIRIMVDITSPLQREVKIKTKEEMRECQVALAEDSGKGEFMYGGINAGADMVGEGSGGVKEKGATSKAPTNDKVAGGRKWKRMAREEGGGMVLGNGVGLGKLVVSLESSIGGLEAWEEPLRKKNKDGRGIVVDEMISANLGD
Homology
BLAST of Lag0008057 vs. NCBI nr
Match:
KQK12682.2 (hypothetical protein BRADI_1g05328v3, partial [Brachypodium distachyon])
HSP 1 Score: 55.8 bits (133), Expect = 4.2e-04
Identity = 34/83 (40.96%), Postives = 49/83 (59.04%), Query Frame = 0
BLAST of Lag0008057 vs. NCBI nr
Match:
XP_022149484.1 (uncharacterized protein LOC111017902 [Momordica charantia])
HSP 1 Score: 54.7 bits (130), Expect = 9.3e-04
Identity = 20/54 (37.04%), Postives = 38/54 (70.37%), Query Frame = 0
The following BLAST results are available for this feature:
Match Name E-value Identity Description
KQK12682.2 4.2e-04 40.96 hypothetical protein BRADI_1g05328v3, partial [Brachypodium distachyon] [more] XP_022149484.1 9.3e-04 37.04 uncharacterized protein LOC111017902 [Momordica charantia] [more]
Match Name E-value Identity Description
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
A T G T C T G T G G A A A T G G C C A A A T T A G T A G G A G G G T C A A T A G G T G A G G T G G A G G A A G T A G A T T G G G A T G A G G T A G G C A G G T G G T C G G G G C G A G T G A T G A G A A T C A G A A T A A T G G T T G A C A T C A C T A G T C C T C T T C A G A G G G A A G T T A A G A T T A A A A C G A A G G A G G A A A T G A G A G A A T G T C A G G T A G C T C T G G C G G A G G A T A G T G G G A A G G G T G A G T T T A T G T A T G G A G G G A T T A A T G C G G G G G C T G A T A T G G T A G G G G A A G G C T C G G G A G G G G T G A A G G A G A A G G G A G C C A C T A G T A A G G C C C C T A C C A A T G A T A A A G T G G C C G G T G G G A G G A A G T G G A A A A G G A T G G C A A G G G A G G A A G G G G G T G G T A T G G T A C T G G G A A A T G G G G T T G G T T T G G G G A A G C T C G T T G T C T C C C T A G A G T C G A G T A T T G G A G G G C T G G A G G C T T G G G A G G A A C C G T T G A G G A A G A A G A A T A A G G A T G G T C G A G G C A T T G T T G T T G A T G A A A T G A T A T C G G C G A A C C T T G G G G A T T A G 50 100 150 200 250 300 350 400 450 500 Score = Sequence mobidb-lite
IPR Term IPR Description Source Source Term Source Description Alignment
None No IPR available MOBIDB_LITE mobidb-lite disorder_prediction coord: 87..107
Relationships
The following mRNA feature(s) are a part of this gene:
