Lag0007947 (gene) Sponge gourd (AG‐4) v1

Overview
NameLag0007947
Typegene
OrganismLuffa acutangula (Sponge gourd (AG‐4) v1)
DescriptionReverse transcriptase domain-containing protein
Locationchr9: 8854268 .. 8856155 (-)
RNA-Seq ExpressionLag0007947
SyntenyLag0007947
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTATCTTCTAGAGGCCCCCAAAGCAGAGATCTAGTTGCTGAATCGAACAAGAGGCGAGGGTTTGAAAGTTCAAGAGCAAGGATTAACGATCTGGGGAATGCTCATGCAGGTGAGATTGTGTGTATCAAAGAGATCTGAAAGAGAAGAAAACTTGAGTGTAGTCGGATTTGAGAAGCTTGAGAAGAAGAGCGATAACACCGCGCGCGCGAGAGAGATGAAATGAAACCGACGAAGGGCATTGGGTGAATGTCCGTTTACAAAACGACGCTTGATCGGGAACTTTTTTTTTTTTTTTTTCAACAACACATTGGGGAGGGATTCCAATCTCTAACCTCTGTTGGTCGAGATATATGTGTCAACTATTGCTAAACTATGGCGTGAACACTTTTTTCCCCATAATAATTATTTTTTATTATAATTTTTGGCCAAAAAAAAATCAATTTATACCTCCAAACTTTGGAATTAAATTAATAATTGTATCAATTAAAATCTTAAATTTCATAAGTGTATCAATTTACACTCTCTGTTAGATTTTATTTGACAAACGTCGGTGTTCATACGTAATTTCAAAAGAATGAAACACATGGAATAAACATTGATTTGTATTGAATTTGTATGAATATGAGTGTACAATTTCTAACTTTGATCACGTTATGTGAGGTTTGAAGAAAGTTGGTTGACCTTTGAAGAATGCAAGAAAATCATTAGTTGCCACTGGAGGGTAGTCAGCAAGCTAATCCCAATAATTTTGGTCAAATGTTAGCTTCATGTCTTGAGAAGCTAATGAGTTGGAACAAAGCCAGACTTAAGGGTTCTATCAAAACTGTTATTTCAATAAAAGAGAAAGAGATTCAAGCCTTACTCAATGTGGCTAATCAATTTCAAGAAGCTGTGGTCAGAAGATCAGAAAGGGAATTGGAAAACTTGTTGGATGAAGAGGAGAAGTATTGGAAGTTGAGGTTCAAGGAAGATTGGCTTAAGTGGGGAGATCGCAATACAAAATGGTTCCACACTGGAGCCAATTTTAGGAGGAAAAACAGACTAGAAGACATTTTGGATGACAGAGGTACTAGGGTCACTAAGGAATCAAAAATGGGGAAAGCTACTACTAACTACTTCAAGTCCTTGTGTTAAGTGCAAGGGGTCTAGCAATGAGGCAGTCAAGATTATTATGGAGGGCATCTCTCACTCAATCATAGAGGAACAAGTCAGGGAGATCGATAAACCATACTCTAGTGTAGAGATAGAAGCAACGCTCAAAATCATGAATCCTATGAAGGCCTTGGGTCCTAACGGGGTCCACGCGATGTTTTACCAAAATTACTCAAGTATCATTAACAATGAGACTACTTCTATTTGCCTAGATATTCTCAACCACTGGATGGATGTAGGCCCCCTGAATAAAACCTTTATAACCTTGATCTTGAAATCCAAGCACCCAAAAAAGATGGAGGATACCTATTAGCTTATGCAACGTTATATATAAGTTAATAGCTAAAATCCTAGTTAACAGGTTAAAGAAGGTCCTTGGCTCCATCATCTCCTCGACCCAATCAGCATTTGTCCTTAGTAGGCTCGTTTCAGACAATGTTGTAGCAAGGTTCGAGTGCATTCACGCGATTAATAGCAGGAGGAAAGGTTAGAAGGGAGTGGCAGTGATAACTCTCCAAAAGGTATTTATTTAGGCTTCATTTATATAGGGATTTGTGTGTCTTTTATGCTTAATAGGGTTGGTTTTAGATATATATTATATGTTTTAACCCATTTGGAAGAATGAAAGCTTTGGAAGTTATTTTATGCAGAATGTATTGCTGAGCGACTGGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAAAACTGCCACGTCACAACTTGTTAG

mRNA sequence

ATGGTATCTTCTAGAGGCCCCCAAAGCAGAGATCTAGTTGCTGAATCGAACAAGAGGCGAGGGTTTGAAAGTTCAAGAGCAAGGATTAACGATCTGGGGAATGCTCATGCAGCTTCATGTCTTGAGAAGCTAATGAGTTGGAACAAAGCCAGACTTAAGGGTTCTATCAAAACTGTTATTTCAATAAAAGAGAAAGAGATTCAAGCCTTACTCAATGTGGCTAATCAATTTCAAGAAGCTGTGGTCAGAAGATCAGAAAGGGAATTGGAAAACTTGTTGGATGAAGAGGAGAAGTATTGGAAGTTGAGGTTCAAGGAAGATTGGCTTAAGTGGGGAGATCGCAATACAAAATGGTTCCACACTGGAGCCAATTTTAGGAGGAAAAACAGACTAGAAGACATTTTGGATGACAGAGTCAAGATTATTATGGAGGGCATCTCTCACTCAATCATAGAGGAACAAGTCAGGGAGATCGATAAACCATACTCTAGTGTAGAGATAGAAGCAACGCTCAAAATCATGAATCCTATGAAGGCCTTGGGTCCTAACGGGGTCCACGCGATGTTAAAGAAGGTCCTTGGCTCCATCATCTCCTCGACCCAATCAGCATTTGTCCTTAGTAGGCTCGTTTCAGACAATGTTGTAGCAAGGTTCGAGTGCATTCACGCGATTAATAGCAGGAGGAAAGAATGTATTGCTGAGCGACTGGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAAAACTGCCACGTCACAACTTGTTAG

Coding sequence (CDS)

ATGGTATCTTCTAGAGGCCCCCAAAGCAGAGATCTAGTTGCTGAATCGAACAAGAGGCGAGGGTTTGAAAGTTCAAGAGCAAGGATTAACGATCTGGGGAATGCTCATGCAGCTTCATGTCTTGAGAAGCTAATGAGTTGGAACAAAGCCAGACTTAAGGGTTCTATCAAAACTGTTATTTCAATAAAAGAGAAAGAGATTCAAGCCTTACTCAATGTGGCTAATCAATTTCAAGAAGCTGTGGTCAGAAGATCAGAAAGGGAATTGGAAAACTTGTTGGATGAAGAGGAGAAGTATTGGAAGTTGAGGTTCAAGGAAGATTGGCTTAAGTGGGGAGATCGCAATACAAAATGGTTCCACACTGGAGCCAATTTTAGGAGGAAAAACAGACTAGAAGACATTTTGGATGACAGAGTCAAGATTATTATGGAGGGCATCTCTCACTCAATCATAGAGGAACAAGTCAGGGAGATCGATAAACCATACTCTAGTGTAGAGATAGAAGCAACGCTCAAAATCATGAATCCTATGAAGGCCTTGGGTCCTAACGGGGTCCACGCGATGTTAAAGAAGGTCCTTGGCTCCATCATCTCCTCGACCCAATCAGCATTTGTCCTTAGTAGGCTCGTTTCAGACAATGTTGTAGCAAGGTTCGAGTGCATTCACGCGATTAATAGCAGGAGGAAAGAATGTATTGCTGAGCGACTGGAGGGAGCAAATTCTGTGCTGCAGCAAAACTGGGAGCAAAACTGCCACGTCACAACTTGTTAG

Protein sequence

MVSSRGPQSRDLVAESNKRRGFESSRARINDLGNAHAASCLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRKNRLEDILDDRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAMLKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRKECIAERLEGANSVLQQNWEQNCHVTTC
Homology
BLAST of Lag0007947 vs. NCBI nr
Match: XP_042980184.1 (uncharacterized protein LOC122310355 [Carya illinoinensis])

HSP 1 Score: 99.8 bits (247), Expect = 3.7e-17
Identity = 64/183 (34.97%), Postives = 103/183 (56.28%), Query Frame = 0

Query: 89  LENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRR-KNRLEDILDDRVKIIMEGIS 148
           ++NL+ +E+  WK R K++W K GD+NTK+FH+ AN RR KNR+++I DD  ++++    
Sbjct: 77  VQNLMGQEDIKWKHRAKQNWYKNGDQNTKFFHSCANQRRIKNRVKEIKDDNARVVI---- 136

Query: 149 HSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHA-------------------- 208
                EQ     +PY   E+   LK M P+K+ GPNG  A                    
Sbjct: 137 -----EQGEMERRPYVEEEVMIALKQMAPLKSPGPNGYGACFYQAYWGTVREEVCKVLEN 196

Query: 209 MLKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRKE---CIAERLEGANSVLQ 248
            LKKVL  +IS++QSAF+L RL +DN++  ++ +H + +R+K     +A +L+ A +  +
Sbjct: 197 RLKKVLPLLISNSQSAFILRRLTTDNMMIAYKALHTMKTRQKRKVGSMALKLDMAKTYDR 250

BLAST of Lag0007947 vs. NCBI nr
Match: XP_042958006.1 (uncharacterized protein LOC122293492 [Carya illinoinensis])

HSP 1 Score: 96.3 bits (238), Expect = 4.1e-16
Identity = 71/242 (29.34%), Postives = 119/242 (49.17%), Query Frame = 0

Query: 47  WNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYWKLRFKE 106
           W+K + + + K V   K K +Q L    +      +R+   EL  LL++E+ +WK R K 
Sbjct: 660 WSKMKKQRNGKEV-EEKTKLLQRLQAEESSENVEEIRKLTTELHALLEKEDLWWKQRAKT 719

Query: 107 DWLKWGDRNTKWFHTGANFRRK-NRLEDILDD---------------------------- 166
           +W K GDRNTK+FH  AN RRK N + ++ DD                            
Sbjct: 720 NWYKHGDRNTKYFHACANQRRKRNFINEVEDDNNNMACGYIQVEEAFRKYFGNVFQSTQP 779

Query: 167 ---RVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNG-----VHAML 226
               ++  + G+   + E     + + ++ VE+E  +K M P+KA GP+G       A  
Sbjct: 780 SKAEIEACLVGMDRRVTEGMNERLTRRFTVVEVEKAVKQMAPLKAPGPDGFGLCFYWAWF 839

Query: 227 KKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRKE---CIAERLEGANSVLQQN 249
           K  L  IIS  QSAF+  RL++DN++  +E +H++ +R+KE    +A +L+ + +  +  
Sbjct: 840 KGALAEIISPKQSAFLPGRLINDNIMVAYELLHSMRNRKKEKVGSMAMKLDMSKAYDRVE 899

BLAST of Lag0007947 vs. NCBI nr
Match: XP_023912060.1 (uncharacterized protein LOC112023667 [Quercus suber])

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-15
Identity = 64/220 (29.09%), Postives = 114/220 (51.82%), Query Frame = 0

Query: 35  AHAASCLEKLMSWNKARLKGSIKTVISIKEKEIQAL--LNVANQFQEAVVRRSERELENL 94
           A   +C ++L  WNK  + G I   +  +++++  L  LN  +++ E  ++R  +E+  L
Sbjct: 30  AKVKNCQDQLQWWNK-NVFGHINKQLKDRQEKLPQLESLNTLHEYAED-IQRLRKEINEL 89

Query: 95  LDEEEKYWKLRFKEDWLKWGDRNTKWFH-TGANFRRKNRLEDILDD-----RVKIIMEGI 154
           +D+E   W  R +  W++ GDRNTK+FH T    RRKN +  + DD        ++ + +
Sbjct: 90  MDKENDMWHQRSRALWMQEGDRNTKFFHSTATQRRRKNTILGLQDDFDMPSTFAVVEDAL 149

Query: 155 SHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHAM-----------------L 214
              +  E    +   +   E+   L+ M+P+K+ GP+    +                 L
Sbjct: 150 EPKVTPEMNATLLSEFHPDEVRDALQQMHPLKSPGPDDYRPISLSNVLSRIISKVLANHL 209

Query: 215 KKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRK 230
           K++L  +IS++QSAF+  +L++DNV+  FE +H IN RRK
Sbjct: 210 KQILPDVISTSQSAFLFDKLITDNVLVTFETMHHINQRRK 247

BLAST of Lag0007947 vs. NCBI nr
Match: XP_015380705.1 (uncharacterized protein LOC107174377 [Citrus sinensis])

HSP 1 Score: 94.4 bits (233), Expect = 1.6e-15
Identity = 69/250 (27.60%), Postives = 121/250 (48.40%), Query Frame = 0

Query: 41  LEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKYW 100
           + +L  W++   KG  K +  +  +  +   +         ++R +R ++N+L +EE YW
Sbjct: 1   MAQLKCWSREEFKGRKKKLDKLVARLKELRFSGRQYSNGEEIKRVKRHIQNILIDEEIYW 60

Query: 101 KLRFKEDWLKWGDRNTKWFHTGANFR-RKNRLEDILD----------------------- 160
           K R   DWLK  D+NTK+FH  A+ R RKNR+  I D                       
Sbjct: 61  KQRSWVDWLKEVDKNTKYFHAKASSRKRKNRIWGIEDSQRNWIVMGEEVERELCAYFANL 120

Query: 161 --------DRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNG---- 220
                   +++   +E I+  + +E   ++ +P++  EI   L  M P KA GP+G    
Sbjct: 121 FSTTRPDQNQLDAALEEITLRVTKEMNDQLQQPFTEEEILEALYQMCPTKAPGPDGFPTI 180

Query: 221 ----VHAMLKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRKE---CIAERLE 248
               +   LK +L  +IS TQSAF+ +RL++DN++  +EC+H I   ++E    +A +L+
Sbjct: 181 VAKAIANRLKHILHQVISPTQSAFIPNRLITDNIIIGYECLHKIRHSKRERNGLVALKLD 240

BLAST of Lag0007947 vs. NCBI nr
Match: XP_030498017.1 (uncharacterized protein LOC115713672 [Cannabis sativa])

HSP 1 Score: 92.4 bits (228), Expect = 6.0e-15
Identity = 77/249 (30.92%), Postives = 117/249 (46.99%), Query Frame = 0

Query: 40  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNV-ANQFQEAVVRRSERELENLLDEEEK 99
           C ++L +WNK++  GSI  ++   +K++  LL+V A   +   V+R E +L +LL  EE 
Sbjct: 268 CADRLGAWNKSKF-GSIPKLVRETQKQLDDLLSVSALLVRMDEVKRLEIKLNDLLAREEC 327

Query: 100 YWKLRFKEDWLKWGDRNTKWFHTGANFRRKNR---------------LEDILDD------ 159
           YWKLR + DWL  GDRNTK+FH  A  R+K                  EDI+ +      
Sbjct: 328 YWKLRSRADWLAMGDRNTKFFHNKATGRKKKNGIVEIMTEDGRKLTTEEDIVGEIEHYFG 387

Query: 160 --------RVKIIMEGISH---SIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVH 219
                    V+ +  GIS    SI  E+   ++ P+++ ++   +K +   KA GP+G H
Sbjct: 388 TIFSSTSPTVQQVESGISSVGVSISSEESVTLEAPFTNDDVLCAVKAIRATKAPGPDGFH 447

Query: 220 AM-------------------------------LKKVLGSIISSTQSAFVLSRLVSDNVV 225
           A+                               LK  L  +ISS QSAFV  R + DNV+
Sbjct: 448 AIFFQKSSFVKEYRPISLCSVMYKIVAKVVALWLKGTLSPLISSFQSAFVPGRSIHDNVM 507

BLAST of Lag0007947 vs. ExPASy TrEMBL
Match: A0A2N9IDC0 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51759 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-15
Identity = 64/239 (26.78%), Postives = 117/239 (48.95%), Query Frame = 0

Query: 40  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKY 99
           C   L++W++ +  GS  + I  K + +Q L++    +    +   + EL  LL++EE +
Sbjct: 646 CRASLVAWSRVKF-GSFASSIKDKREHLQHLMDEFPLWDSPAIMEVQDELNGLLEKEEIF 705

Query: 100 WKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILD---------------------- 159
           W+ R +  W+  GD+NTK+FH   N RR+ N ++ + D                      
Sbjct: 706 WRQRSRVSWMSEGDKNTKFFHAQCNHRRQLNSIKGLHDNHGVWQTDKSKILKIAVDYFKT 765

Query: 160 ---------DRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHA 219
                    D ++  +EG+   +  E   ++ + +++ E+   L+ M P KA GP+G+ A
Sbjct: 766 IFTSGNPGLDSIQSCLEGVEGIVTAELNGQLIEDFTAQEVVEALQDMYPTKAPGPDGMFA 825

Query: 220 M-----------------LKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRK 230
           +                 LKKVL  ++S +QSAFV  RL++DNV+  FE +H+++ +R+
Sbjct: 826 IFYQTYWDVVGPKVLANRLKKVLPLVLSESQSAFVPGRLITDNVLVAFEVMHSMSLKRR 883

BLAST of Lag0007947 vs. ExPASy TrEMBL
Match: A0A2N9FWV7 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS19664 PE=4 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 2.2e-15
Identity = 62/221 (28.05%), Postives = 110/221 (49.77%), Query Frame = 0

Query: 40  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKY 99
           C   L++W++ R  GS+   I +K +++Q   N++     + +   + EL  LL++EE +
Sbjct: 622 CRVSLIAWSQERF-GSLAASIKLKREQLQHETNLSISGLSSRLVELQTELNGLLEKEEIF 681

Query: 100 WKLRFKEDWLKWGDRNTKWFHTGANFRR------------------KNRLEDIL------ 159
           W+ R +  W+  GD+NTK+FH     RR                  KN++ DI       
Sbjct: 682 WRQRSRISWMSEGDKNTKFFHASCTQRRQTNLIRGLYDQDNIWQTEKNKIADIAVTYFQN 741

Query: 160 --------DDRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHA 219
                    D +   +EG+   +  +    +   ++  E+ A L+ M P KA GP+G+ A
Sbjct: 742 IFTSSQPGVDTINSCLEGMVSVVTADMNANLLAQFTEEEVFAALQQMYPTKAPGPDGMSA 801

Query: 220 MLKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRR 229
           +  +    I+S +QSAFV  RL++DNV+  FE +H+++ +R
Sbjct: 802 IFYQTYWEIVSESQSAFVPGRLITDNVLVAFEVMHSMSLKR 841

BLAST of Lag0007947 vs. ExPASy TrEMBL
Match: A0A2I4GX79 (uncharacterized protein LOC109011659 OS=Juglans regia OX=51240 GN=LOC109011659 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 2.9e-15
Identity = 72/241 (29.88%), Postives = 118/241 (48.96%), Query Frame = 0

Query: 30  NDLGNAHA--ASCLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSER 89
           ND+G      ++C  KL  WN+    G ++  +    +++Q L    + + +       R
Sbjct: 23  NDMGEVMTMISNCSHKLTVWNRVSF-GKVQYQLRKANQKLQYLQENGSTYGDREAHLLAR 82

Query: 90  -ELENLLDEEEKYWKLRFKEDWLKWGDRNTKWFHTGANFRRK----NRLEDILDD----- 149
            E++  L+ EE  W+ R K  WLK GD+N+K+FHT A+ RR+     RL+D   +     
Sbjct: 83  VEVQTWLEREETMWRQRSKALWLKEGDQNSKYFHTKASHRRRRNGIKRLKDANGEWQEGE 142

Query: 150 -RVKIIMEGISHSIIEEQVR-------------------EIDKPYSSVEIEATLKIMNPM 209
            + +II+E   +       R                   ++ +PY+  E+   LK MNP 
Sbjct: 143 RKDRIILEYFQNLFSATDKRGQTDFLECLDGRVTTLMNEDLTRPYTGKEVTDALKEMNPS 202

Query: 210 KALGPNGV--------HAMLKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRK 231
           KA GP+G+          +LKK+L ++IS +QSAFV  RL++DNV+  +E IH +  +  
Sbjct: 203 KAPGPDGMAPIFFQKYWGILKKILPNVISDSQSAFVPRRLITDNVLVAYELIHYLRHKTT 262

BLAST of Lag0007947 vs. ExPASy TrEMBL
Match: A0A2N9ERX7 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5477 PE=4 SV=1)

HSP 1 Score: 90.1 bits (222), Expect = 1.4e-14
Identity = 69/239 (28.87%), Postives = 113/239 (47.28%), Query Frame = 0

Query: 39   SCLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEK 98
            SC + L+SW+K R  GS+ + I  K K++QAL N         +   + EL +LL++EE 
Sbjct: 865  SCRQSLISWSKDRF-GSLASRIKEKRKQLQALANERPSGNPLDIMTLQDELNDLLEKEEI 924

Query: 99   YWKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILD--------------------- 158
            +W  R +  W++ GDRN K+FH   N RRK N ++ +LD                     
Sbjct: 925  FWCQRSRVAWMREGDRNAKFFHAQCNQRRKTNSIKRLLDANGCWQTEQSRMANVAMDYCR 984

Query: 159  ----------DRVKIIMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVH 218
                      + +   + G+   +  +    +   +++ E++  L  M P KA GP+G+ 
Sbjct: 985  NIFTSKQPLPEVIDSCLRGMECVVTADMNATLLMEFTADEVQQALNQMYPTKAPGPDGMP 1044

Query: 219  A-----------------MLKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRR 229
            A                  LK VL  +I+  QSAFV  RL++DNV+  FE +H+++ +R
Sbjct: 1045 ARFYQTYWEIVGPEVLANRLKGVLSVVIADLQSAFVPGRLITDNVLVAFETLHSMSLKR 1102

BLAST of Lag0007947 vs. ExPASy TrEMBL
Match: A0A2N9EEA9 (CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 1.9e-14
Identity = 69/239 (28.87%), Postives = 117/239 (48.95%), Query Frame = 0

Query: 40  CLEKLMSWNKARLKGSIKTVISIKEKEIQALLNVANQFQEAVVRRSERELENLLDEEEKY 99
           C   L++W+K R  G + + I  K K +Q L NV      A +   + E+ +LL++EE +
Sbjct: 750 CRVSLIAWSKERF-GKLASRIKEKRKRLQELSNVNPIDLSAEILALQDEINDLLEKEEIF 809

Query: 100 WKLRFKEDWLKWGDRNTKWFHTGANFRRK-NRLEDILD-------DRVKI---------- 159
           W+ R +  W++ GD+NT++FH   N RRK N +  +LD       D++K+          
Sbjct: 810 WRQRSRVAWMQDGDQNTRFFHAQCNQRRKTNFISGLLDSDGCWQTDQMKVADLAVEYFRN 869

Query: 160 --------------IMEGISHSIIEEQVREIDKPYSSVEIEATLKIMNPMKALGPNGVHA 219
                          + G+   + ++    + + +S  E+   L  M P KA GP+G+ A
Sbjct: 870 IFTSSQPQSAVIDSCLWGVERVVTQDMNDALLQEFSEEEVRQALWQMYPTKAPGPDGMSA 929

Query: 220 M-----------------LKKVLGSIISSTQSAFVLSRLVSDNVVARFECIHAINSRRK 230
           +                 LK VL  +IS +QSAFV  RL++DNV+  FE +H+++ ++K
Sbjct: 930 IFYQTYWEIVGPEVLANRLKGVLPVVISDSQSAFVPGRLITDNVLVAFETLHSMSLKKK 987

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_042980184.13.7e-1734.97uncharacterized protein LOC122310355 [Carya illinoinensis][more]
XP_042958006.14.1e-1629.34uncharacterized protein LOC122293492 [Carya illinoinensis][more]
XP_023912060.11.6e-1529.09uncharacterized protein LOC112023667 [Quercus suber][more]
XP_015380705.11.6e-1527.60uncharacterized protein LOC107174377 [Citrus sinensis][more]
XP_030498017.16.0e-1530.92uncharacterized protein LOC115713672 [Cannabis sativa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A2N9IDC02.2e-1526.78Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS51759 PE=4 SV=1[more]
A0A2N9FWV72.2e-1528.05CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS1966... [more]
A0A2I4GX792.9e-1529.88uncharacterized protein LOC109011659 OS=Juglans regia OX=51240 GN=LOC109011659 P... [more]
A0A2N9ERX71.4e-1428.87CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS5477... [more]
A0A2N9EEA91.9e-1428.87CCHC-type domain-containing protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS967 ... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 75..95

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Lag0007947.1Lag0007947.1mRNA