Lag0007934 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTATCCATAAGAGGTGCATTATCTTGCTTGTAATATCCATTTGTTTGAGCATTGAACTAATGCAAGTGAGCAATGCACTATTCGACAAGTATTATGTTCACATCATCAACGGCTTCAACAACGAGACAATTGGAGCTCATTGTTCGTCGAAAGATAACGACCTAGGCAACCAATTCATCCCGGTCGGGGGCGAGTTCCAATGGAATTTCCGAACGAACTTCCTTGAAACAACATTGTTCGAATGTCATATTTGGTGGACGGAAGGGCACATTACGTATAAGGCATATTATCACAATGATGAGTTTGAGAACATTCTATGTGGAGATGGACATTGCAGATGGAAAGCAGATGCTCGGGGAATTTCTGCTTTCCATGTTGAGCAAAATGTGTATGAATTGCAATACACATGGCAACATTGA ATGGGTATCCATAAGAGGTGCATTATCTTGCTTGTAATATCCATTTGTTTGAGCATTGAACTAATGCAAGTGAGCAATGCACTATTCGACAAGTATTATGTTCACATCATCAACGGCTTCAACAACGAGACAATTGGAGCTCATTGTTCGTCGAAAGATAACGACCTAGGCAACCAATTCATCCCGGTCGGGGGCGAGTTCCAATGGAATTTCCGAACGAACTTCCTTGAAACAACATTGTTCGAATGTCATATTTGGTGGACGGAAGGGCACATTACGTATAAGGCATATTATCACAATGATGAGTTTGAGAACATTCTATGTGGAGATGGACATTGCAGATGGAAAGCAGATGCTCGGGGAATTTCTGCTTTCCATGTTGAGCAAAATGTGTATGAATTGCAATACACATGGCAACATTGA ATGGGTATCCATAAGAGGTGCATTATCTTGCTTGTAATATCCATTTGTTTGAGCATTGAACTAATGCAAGTGAGCAATGCACTATTCGACAAGTATTATGTTCACATCATCAACGGCTTCAACAACGAGACAATTGGAGCTCATTGTTCGTCGAAAGATAACGACCTAGGCAACCAATTCATCCCGGTCGGGGGCGAGTTCCAATGGAATTTCCGAACGAACTTCCTTGAAACAACATTGTTCGAATGTCATATTTGGTGGACGGAAGGGCACATTACGTATAAGGCATATTATCACAATGATGAGTTTGAGAACATTCTATGTGGAGATGGACATTGCAGATGGAAAGCAGATGCTCGGGGAATTTCTGCTTTCCATGTTGAGCAAAATGTGTATGAATTGCAATACACATGGCAACATTGA MGIHKRCIILLVISICLSIELMQVSNALFDKYYVHIINGFNNETIGAHCSSKDNDLGNQFIPVGGEFQWNFRTNFLETTLFECHIWWTEGHITYKAYYHNDEFENILCGDGHCRWKADARGISAFHVEQNVYELQYTWQH Homology
BLAST of Lag0007934 vs. NCBI nr
Match: KAA0050599.1 (pumilio-like protein 15-like [Cucumis melo var. makuwa] >TYK07841.1 pumilio-like protein 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 214.2 bits (544), Expect = 7.4e-52 Identity = 97/140 (69.29%), Postives = 110/140 (78.57%), Query Frame = 0
BLAST of Lag0007934 vs. NCBI nr
Match: XP_031745088.1 (S-protein homolog 3-like [Cucumis sativus]) HSP 1 Score: 208.0 bits (528), Expect = 5.3e-50 Identity = 94/129 (72.87%), Postives = 108/129 (83.72%), Query Frame = 0
BLAST of Lag0007934 vs. NCBI nr
Match: KAE8646226.1 (hypothetical protein Csa_016670 [Cucumis sativus]) HSP 1 Score: 208.0 bits (528), Expect = 5.3e-50 Identity = 94/129 (72.87%), Postives = 108/129 (83.72%), Query Frame = 0
BLAST of Lag0007934 vs. NCBI nr
Match: KAG2712057.1 (hypothetical protein I3760_04G107500 [Carya illinoinensis] >KAG6717558.1 hypothetical protein I3842_04G106900 [Carya illinoinensis] >KAG7983312.1 hypothetical protein I3843_04G099800 [Carya illinoinensis]) HSP 1 Score: 127.1 bits (318), Expect = 1.2e-25 Identity = 59/132 (44.70%), Postives = 85/132 (64.39%), Query Frame = 0
BLAST of Lag0007934 vs. NCBI nr
Match: XP_042974627.1 (uncharacterized protein LOC122306260 [Carya illinoinensis]) HSP 1 Score: 127.1 bits (318), Expect = 1.2e-25 Identity = 59/132 (44.70%), Postives = 85/132 (64.39%), Query Frame = 0
BLAST of Lag0007934 vs. ExPASy Swiss-Prot
Match: F4JLQ5 (S-protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=SPH2 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 6.2e-09 Identity = 44/156 (28.21%), Postives = 69/156 (44.23%), Query Frame = 0
BLAST of Lag0007934 vs. ExPASy Swiss-Prot
Match: F4JLS0 (S-protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=SPH1 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.1e-08 Identity = 39/147 (26.53%), Postives = 64/147 (43.54%), Query Frame = 0
BLAST of Lag0007934 vs. ExPASy Swiss-Prot
Match: Q40975 (Self-incompatibility protein S1 OS=Papaver rhoeas OX=33128 GN=S1 PE=1 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.4e-08 Identity = 41/133 (30.83%), Postives = 65/133 (48.87%), Query Frame = 0
BLAST of Lag0007934 vs. ExPASy Swiss-Prot
Match: Q2HQ46 (S-protein homolog 74 OS=Arabidopsis thaliana OX=3702 GN=SPH74 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.8e-08 Identity = 32/93 (34.41%), Postives = 49/93 (52.69%), Query Frame = 0
BLAST of Lag0007934 vs. ExPASy Swiss-Prot
Match: P0DN92 (S-protein homolog 24 OS=Arabidopsis thaliana OX=3702 GN=SPH24 PE=3 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 1.3e-06 Identity = 40/142 (28.17%), Postives = 66/142 (46.48%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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