Lag0007874 (gene) Sponge gourd (AG‐4) v1

Overview


Name	Lag0007874
Type	gene
Organism	Luffa acutangula (Sponge gourd (AG‐4) v1)
Description	Gag protease polyprotein
Location	chr9: 6877742 .. 6878956 (-)
RNA-Seq Expression	Lag0007874
Synteny	Lag0007874

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGGCATGGACAAAATCTACTAGAAAACCCACAAGTGGAACAACCGGGGCCTGCGGCAGGACCTGTCCCAGTGTATATCCAGGCAATAGTTCAGACTGCAGTTCAGGCTGTAGTTACGGGCGTGCTTGCAGGGCGACAGGCCCAAGCGCCTCAGAACAACGAAACCCTATCGCGGGAGGCTAGGTGCTTAAGAGATTTTAGGAAGTGGGACCCCTGTCTGTTCGATGGAGCCTCAAGGGACCCCACGGTGGCAGAGTTGTGGCTGACCTCCATCGAGATTGTCTTTCGCCACATGAACTTCCCGGAGGACTAGAAAGTGTACTGTGGCGTGTTCCTATTACGGGATAACGCCTTGATTTGGTGGCAATCGATCGAAAGGACTATAGACGTCAGAAACGGACCTGTCACATGGACTCAGTTCAGGGGGGAGTTCTTTAGGGAATATTACCCTGCAGCCTCCCGATTCAAGAAGCAAGCAGAGTTTGTGGCTCTTATGCAGGAAACCGAACCGTAGAGGAATTCAAGACAGAGTTCGCCAGACTTTCTCGGTTTGCTCCTGCCCTGGTAGCTGTAGAGGTTGATAAGGTAGAACGTTTCATCACAGGCTTAAAGGAAGAGATTCAAGGCAGTGTGGTAGCCCATGAACCCCAAGACTATGCCACAACAATCAGGGTGGCAGAGCTGATTGATCGACGACCGTCAGTTATCTCTTCGGAACCTTCCTCAGGTCATAAGCGAAGGTATGATCAGATGAGCTCCCTAGACGAGGTCCGCCCCAGGACCGTCGACAGAAAGCACCGAATCAGCCAGGGCCTAATCAGGATAGGCCGTTACGTCAGACTTGTGGAAGTACCACTGGGGTCGTTGCTTGGCAGGGACCTGTGTTTGTTTCAAGTGTGGCCGGGAAGGGCATATTGCTCCGAATTGTAATAAGAAGAAAACTAATTATGCCGACCAGCCGTCCAGTTCAAATCAGGCATCCGGGGTAAGACCAACACAACATCAGGGCAAGATATTTGCCACCACCCGACAAGAGGCAGAGAACCTTAACGTAGTAGTGACAGGTACCATCCCTATTCTCGGCCATTATGCTTTTGTGTTGTTTGATTCGGGTTCAACGCATTCTTTTATTTCTGCATCGTTTGTAAGTCAAGCCAACCTAGAACTAGAGCCGTTAGGCTATGATTTGTCAGTCTCAACCCCTGCGGGGTAA

mRNA sequence

ATGGGGCATGGACAAAATCTACTAGAAAACCCACAAGTGGAACAACCGGGGCCTGCGGCAGGACCTGTCCCAGTGTATATCCAGGCAATAGTTCAGACTGCAGTTCAGGCTGTAGTTACGGGCGTGCTTGCAGGGCGACAGGCCCAAGCGCCTCAGAACAACGAAACCCTATCGCGGGAGGCTAGCCTCCCGATTCAAGAAGCAAGCAGAGTTTGTGGCTCTTATGCAGGAAACCGAACCGTAGAGGAATTCAAGACAGAGTTCGCCAGACTTTCTCGGTTTGCTCCTGCCCTGGTAGCTGTAGAGGTTGATAAGGTAGAACGTTTCATCACAGGCTTAAAGGAAGAGATTCAAGGCAGTGTGGTAGCCCATGAACCCCAAGACTATGCCACAACAATCAGGGTGGCAGAGCTGATTGATCGACGACCGTCAGTTATCTCTTCGGAACCTTCCTCAGGTCATAAGCGAAGGTATGATCAGATGAGCTCCCTAGACGAGGTCCGCCCCAGGACCGTCGACAGAAAGCACCGAATCAGCCAGGGCCTAATCAGGATAGGCCGGACCTGTGTTTGTTTCAAGTGTGGCCGGGAAGGGCATATTGCTCCGAATTGTAATAAGAAGAAAACTAATTATGCCGACCAGCCGTCCAGTTCAAATCAGGCATCCGGGGTAAGACCAACACAACATCAGGGCAAGATATTTGCCACCACCCGACAAGAGGCAGAGAACCTTAACGTAGTAGTGACAGGTACCATCCCTATTCTCGGCCATTATGCTTTTGTGTTGTTTGATTCGGGTTCAACGCATTCTTTTATTTCTGCATCGTTTGTAAGTCAAGCCAACCTAGAACTAGAGCCGTTAGGCTATGATTTGTCAGTCTCAACCCCTGCGGGGTAA

Coding sequence (CDS)

ATGGGGCATGGACAAAATCTACTAGAAAACCCACAAGTGGAACAACCGGGGCCTGCGGCAGGACCTGTCCCAGTGTATATCCAGGCAATAGTTCAGACTGCAGTTCAGGCTGTAGTTACGGGCGTGCTTGCAGGGCGACAGGCCCAAGCGCCTCAGAACAACGAAACCCTATCGCGGGAGGCTAGCCTCCCGATTCAAGAAGCAAGCAGAGTTTGTGGCTCTTATGCAGGAAACCGAACCGTAGAGGAATTCAAGACAGAGTTCGCCAGACTTTCTCGGTTTGCTCCTGCCCTGGTAGCTGTAGAGGTTGATAAGGTAGAACGTTTCATCACAGGCTTAAAGGAAGAGATTCAAGGCAGTGTGGTAGCCCATGAACCCCAAGACTATGCCACAACAATCAGGGTGGCAGAGCTGATTGATCGACGACCGTCAGTTATCTCTTCGGAACCTTCCTCAGGTCATAAGCGAAGGTATGATCAGATGAGCTCCCTAGACGAGGTCCGCCCCAGGACCGTCGACAGAAAGCACCGAATCAGCCAGGGCCTAATCAGGATAGGCCGGACCTGTGTTTGTTTCAAGTGTGGCCGGGAAGGGCATATTGCTCCGAATTGTAATAAGAAGAAAACTAATTATGCCGACCAGCCGTCCAGTTCAAATCAGGCATCCGGGGTAAGACCAACACAACATCAGGGCAAGATATTTGCCACCACCCGACAAGAGGCAGAGAACCTTAACGTAGTAGTGACAGGTACCATCCCTATTCTCGGCCATTATGCTTTTGTGTTGTTTGATTCGGGTTCAACGCATTCTTTTATTTCTGCATCGTTTGTAAGTCAAGCCAACCTAGAACTAGAGCCGTTAGGCTATGATTTGTCAGTCTCAACCCCTGCGGGGTAA

Protein sequence

MGHGQNLLENPQVEQPGPAAGPVPVYIQAIVQTAVQAVVTGVLAGRQAQAPQNNETLSREASLPIQEASRVCGSYAGNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVAELIDRRPSVISSEPSSGHKRRYDQMSSLDEVRPRTVDRKHRISQGLIRIGRTCVCFKCGREGHIAPNCNKKKTNYADQPSSSNQASGVRPTQHQGKIFATTRQEAENLNVVVTGTIPILGHYAFVLFDSGSTHSFISASFVSQANLELEPLGYDLSVSTPAG

Homology

[Close]

BLAST of Lag0007874 vs. NCBI nr
Match: XP_022937437.1 (uncharacterized protein LOC111443845 [Cucurbita moschata] >XP_022937438.1 uncharacterized protein LOC111443846 [Cucurbita moschata])

HSP 1 Score: 179.1 bits (453), Expect = 5.6e-41
Identity = 106/252 (42.06%), Postives = 146/252 (57.94%), Query Frame = 0


Query: 77  GNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVA 136
           GNR+VEE++ EF RLSRFAP +V++E  KVE F+ GL+ +I+G V+ H+P DYAT +++A
Sbjct: 70  GNRSVEEYEREFTRLSRFAPLMVSMEELKVECFVMGLRPDIRGVVLTHDPPDYATALQLA 129

Query: 137 ELID----------------------RRPSVISSEPSSGH--KRRYDQMSSLDEVRPRTV 196
           E +D                      R  +  +    SGH  K   +Q     +  P+  
Sbjct: 130 ETLDVKEYPTEDTQTHPNTSVDQKRKREQTSPTFSKVSGHQAKTNLNQECRQTKACPQNT 189

Query: 197 DR-KHRISQGLIRIGRTC-----VCFKCGREGHIAPNCNKKKTNYADQPSSSNQASGVRP 256
            R + R S       R C     VCF   +EGH+  +C + +    ++P  +  +S +RP
Sbjct: 190 PRNRPRCSNCGRHHPRQCQFKNRVCFNYHQEGHVVAHCTQGRAASTNRPPGNQLSSNLRP 249

Query: 257 TQHQGKIFATTRQEAENLNVVVTGTIPILGHYAFVLFDSGSTHSFISASFVSQANLELEP 299
              QG+++ATTRQEAEN N  VT T+ ILG+YA VLFDSGSTHSFIS + V  A +E+EP
Sbjct: 250 APQQGRMYATTRQEAENSNTAVTSTLSILGYYARVLFDSGSTHSFISTNLVKHARVEVEP 309

[Close]

BLAST of Lag0007874 vs. NCBI nr
Match: XP_022962669.1 (uncharacterized protein LOC111463090 [Cucurbita moschata])

HSP 1 Score: 176.4 bits (446), Expect = 3.6e-40
Identity = 106/246 (43.09%), Postives = 144/246 (58.54%), Query Frame = 0


Query: 77  GNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVA 136
           GNR+VEE++ EF RLSRF P +VA E +K + FI GL++EIQGSV AH  QD+ T    A
Sbjct: 40  GNRSVEEYEAEFTRLSRFVPLMVATEEEKTDLFIQGLRQEIQGSVSAHASQDFVTAYNAA 99

Query: 137 ELID----RRPSVISSEPSSGHKRRYDQMS--SLDEVRPRTVDRKHRISQGLIRIGR--- 196
             +D    R     SS+     KR++ Q+S  S  +  P+ VDR+    +G     +   
Sbjct: 100 VKLDASTPRNNQGSSSQVRPSGKRKFLQISTGSQQQTVPQRVDRRLYSGEGRAGCSKCGL 159

Query: 197 ----TC-----VCFKCGREGHIAPNCNKKKTNYADQPSSS------NQASGVRPTQHQGK 256
               +C     +C+ CG+ GH+A  C   K     +P  S       Q S     Q +GK
Sbjct: 160 THAGSCNATDKICYNCGKTGHLARVCRSAKNPNMMRPERSVPGGGGGQLSAGGHPQARGK 219

Query: 257 IFATTRQEAENLNVVVTGTIPILGHYAFVLFDSGSTHSFISASFVSQANLELEPLGYDLS 299
            FATT + A + + VVTGT+PI G++A+ +FDSGSTHSFIS SFV QA LE+EPLGY++ 
Sbjct: 220 AFATTSKAAGDASTVVTGTLPISGYFAYTVFDSGSTHSFISLSFVCQARLEVEPLGYEIL 279

[Close]

BLAST of Lag0007874 vs. NCBI nr
Match: KAA0039626.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 168.7 bits (426), Expect = 7.6e-38
Identity = 100/227 (44.05%), Postives = 136/227 (59.91%), Query Frame = 0


Query: 77  GNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVA 136
           G+ TVE++  EF  LSRFAP ++A E  + ++F+ GL+ +IQG V A  P  +A  +R+ 
Sbjct: 252 GDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLV 311

Query: 137 ELIDRRPSVISSE-----PSSGHKRRYDQMSSLDEVRPRTVDRKHRISQGLIRIGRTCVC 196
             +  +    SS+      +SG KR+  Q      V  R     H + + L    RT  C
Sbjct: 312 VDLSLQKRANSSKTAGRGSTSGQKRKAKQQPV--PVPQRNFRSVHHLGRCLF---RTRTC 371

Query: 197 FKCGREGHIAPNCNKKKTNYADQPSSSNQASGVRPTQHQGKIFATTRQEAENLNVVVTGT 256
           FKC +EGH A  C  + T      ++ NQ +G     HQG++FAT R EAE    VVTGT
Sbjct: 372 FKCRQEGHTADRCPLRLTG-----NAQNQGAG---APHQGRVFATNRTEAEKAGTVVTGT 431

Query: 257 IPILGHYAFVLFDSGSTHSFISASFVSQANLELEPLGYDLSVSTPAG 299
           +P+LGHYA VLFDSGS+HSFIS++FVS A LE+EPL + LSVSTP+G
Sbjct: 432 LPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSG 465

[Close]

BLAST of Lag0007874 vs. NCBI nr
Match: KAA0061214.1 (gag protease polyprotein [Cucumis melo var. makuwa] >TYK06262.1 gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 164.1 bits (414), Expect = 1.9e-36
Identity = 107/253 (42.29%), Postives = 141/253 (55.73%), Query Frame = 0


Query: 77  GNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVA 136
           GN TVE++  EF  LSRFAP +V  E  + E+F+ GL+ ++QG V A  P  +A  +R+A
Sbjct: 41  GNMTVEQYDAEFDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIA 100

Query: 137 ELIDRRPSVISSEPSS-----GHKRRYDQMSSLD---EVRPRTVDRKHRISQGLIRIGRT 196
             +     V SS+ +S     G KR+ +   +L    ++R + V ++HR  Q L   GRT
Sbjct: 101 LDLSLHERVDSSKATSRGSSLGQKRKAEPQPALTPQRDLRSKGVFQRHR--QELAAAGRT 160

Query: 197 C----------------------VCFKCGREGHIAPNCNKKK-TNYADQPSSSNQASGVR 256
                                  VCF+C + GH A  C +K       QPS         
Sbjct: 161 LRELPPCGRCKRVHGGRCLLGSGVCFRCRQPGHTADACPRKHFETTLHQPS--------- 220

Query: 257 PTQHQGKIFATTRQEAENLNVVVTGTIPILGHYAFVLFDSGSTHSFISASFVSQANLELE 299
            T  QG++FATTRQEAE    VVTGT+PILGHYAFVLFDSGS+HSFIS+ FV    LE+E
Sbjct: 221 -TFQQGRVFATTRQEAERAGAVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVE 280

[Close]

BLAST of Lag0007874 vs. NCBI nr
Match: KAA0036197.1 (gag protease polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 163.7 bits (413), Expect = 2.4e-36
Identity = 104/250 (41.60%), Postives = 139/250 (55.60%), Query Frame = 0


Query: 77  GNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVA 136
           G+ TVE++  EF  LSRFAP ++A E  + ++F+ GL+ +IQG V A  P  +A  +R+A
Sbjct: 214 GDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLA 273

Query: 137 ELIDRRPSVISSE-----PSSGHKRRYDQMSSLDEVRPRTVDRKHRISQ----------- 196
             +  +    SS+      +SG KR+ +Q       R    D + R  Q           
Sbjct: 274 VDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPDGEFRSFQQKPFEAGEAAR 333

Query: 197 --------GLIRIGR----TCVCFKCGREGHIAPNCNKKKTNYADQPSSSNQASGVRPTQ 256
                   G   +GR    T  CFKC +EGH A  C  + T  A      NQ +G     
Sbjct: 334 GKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIA-----HNQGAG---AP 393

Query: 257 HQGKIFATTRQEAENLNVVVTGTIPILGHYAFVLFDSGSTHSFISASFVSQANLELEPLG 299
           HQG++FAT R EAE    VVTGT+P+LGHYA VLFDSGS+HSFIS++FVS A LE+EPL 
Sbjct: 394 HQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLH 453

[Close]

BLAST of Lag0007874 vs. ExPASy TrEMBL
Match: A0A6J1FB78 (uncharacterized protein LOC111443845 OS=Cucurbita moschata OX=3662 GN=LOC111443845 PE=4 SV=1)

HSP 1 Score: 179.1 bits (453), Expect = 2.7e-41
Identity = 106/252 (42.06%), Postives = 146/252 (57.94%), Query Frame = 0


Query: 77  GNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVA 136
           GNR+VEE++ EF RLSRFAP +V++E  KVE F+ GL+ +I+G V+ H+P DYAT +++A
Sbjct: 70  GNRSVEEYEREFTRLSRFAPLMVSMEELKVECFVMGLRPDIRGVVLTHDPPDYATALQLA 129

Query: 137 ELID----------------------RRPSVISSEPSSGH--KRRYDQMSSLDEVRPRTV 196
           E +D                      R  +  +    SGH  K   +Q     +  P+  
Sbjct: 130 ETLDVKEYPTEDTQTHPNTSVDQKRKREQTSPTFSKVSGHQAKTNLNQECRQTKACPQNT 189

Query: 197 DR-KHRISQGLIRIGRTC-----VCFKCGREGHIAPNCNKKKTNYADQPSSSNQASGVRP 256
            R + R S       R C     VCF   +EGH+  +C + +    ++P  +  +S +RP
Sbjct: 190 PRNRPRCSNCGRHHPRQCQFKNRVCFNYHQEGHVVAHCTQGRAASTNRPPGNQLSSNLRP 249

Query: 257 TQHQGKIFATTRQEAENLNVVVTGTIPILGHYAFVLFDSGSTHSFISASFVSQANLELEP 299
              QG+++ATTRQEAEN N  VT T+ ILG+YA VLFDSGSTHSFIS + V  A +E+EP
Sbjct: 250 APQQGRMYATTRQEAENSNTAVTSTLSILGYYARVLFDSGSTHSFISTNLVKHARVEVEP 309

[Close]

BLAST of Lag0007874 vs. ExPASy TrEMBL
Match: A0A6J1HHR1 (uncharacterized protein LOC111463090 OS=Cucurbita moschata OX=3662 GN=LOC111463090 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 1.8e-40
Identity = 106/246 (43.09%), Postives = 144/246 (58.54%), Query Frame = 0


Query: 77  GNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVA 136
           GNR+VEE++ EF RLSRF P +VA E +K + FI GL++EIQGSV AH  QD+ T    A
Sbjct: 40  GNRSVEEYEAEFTRLSRFVPLMVATEEEKTDLFIQGLRQEIQGSVSAHASQDFVTAYNAA 99

Query: 137 ELID----RRPSVISSEPSSGHKRRYDQMS--SLDEVRPRTVDRKHRISQGLIRIGR--- 196
             +D    R     SS+     KR++ Q+S  S  +  P+ VDR+    +G     +   
Sbjct: 100 VKLDASTPRNNQGSSSQVRPSGKRKFLQISTGSQQQTVPQRVDRRLYSGEGRAGCSKCGL 159

Query: 197 ----TC-----VCFKCGREGHIAPNCNKKKTNYADQPSSS------NQASGVRPTQHQGK 256
               +C     +C+ CG+ GH+A  C   K     +P  S       Q S     Q +GK
Sbjct: 160 THAGSCNATDKICYNCGKTGHLARVCRSAKNPNMMRPERSVPGGGGGQLSAGGHPQARGK 219

Query: 257 IFATTRQEAENLNVVVTGTIPILGHYAFVLFDSGSTHSFISASFVSQANLELEPLGYDLS 299
            FATT + A + + VVTGT+PI G++A+ +FDSGSTHSFIS SFV QA LE+EPLGY++ 
Sbjct: 220 AFATTSKAAGDASTVVTGTLPISGYFAYTVFDSGSTHSFISLSFVCQARLEVEPLGYEIL 279

[Close]

BLAST of Lag0007874 vs. ExPASy TrEMBL
Match: A0A5A7TC57 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold744G001060 PE=4 SV=1)

HSP 1 Score: 168.7 bits (426), Expect = 3.7e-38
Identity = 100/227 (44.05%), Postives = 136/227 (59.91%), Query Frame = 0


Query: 77  GNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVA 136
           G+ TVE++  EF  LSRFAP ++A E  + ++F+ GL+ +IQG V A  P  +A  +R+ 
Sbjct: 252 GDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLV 311

Query: 137 ELIDRRPSVISSE-----PSSGHKRRYDQMSSLDEVRPRTVDRKHRISQGLIRIGRTCVC 196
             +  +    SS+      +SG KR+  Q      V  R     H + + L    RT  C
Sbjct: 312 VDLSLQKRANSSKTAGRGSTSGQKRKAKQQPV--PVPQRNFRSVHHLGRCLF---RTRTC 371

Query: 197 FKCGREGHIAPNCNKKKTNYADQPSSSNQASGVRPTQHQGKIFATTRQEAENLNVVVTGT 256
           FKC +EGH A  C  + T      ++ NQ +G     HQG++FAT R EAE    VVTGT
Sbjct: 372 FKCRQEGHTADRCPLRLTG-----NAQNQGAG---APHQGRVFATNRTEAEKAGTVVTGT 431

Query: 257 IPILGHYAFVLFDSGSTHSFISASFVSQANLELEPLGYDLSVSTPAG 299
           +P+LGHYA VLFDSGS+HSFIS++FVS A LE+EPL + LSVSTP+G
Sbjct: 432 LPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLHHVLSVSTPSG 465

[Close]

BLAST of Lag0007874 vs. ExPASy TrEMBL
Match: A0A5A7V1M1 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold157G00410 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 9.1e-37
Identity = 107/253 (42.29%), Postives = 141/253 (55.73%), Query Frame = 0


Query: 77  GNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVA 136
           GN TVE++  EF  LSRFAP +V  E  + E+F+ GL+ ++QG V A  P  +A  +R+A
Sbjct: 41  GNMTVEQYDAEFDMLSRFAPDVVRDEAARTEKFVRGLRLDLQGIVRALRPATHADALRIA 100

Query: 137 ELIDRRPSVISSEPSS-----GHKRRYDQMSSLD---EVRPRTVDRKHRISQGLIRIGRT 196
             +     V SS+ +S     G KR+ +   +L    ++R + V ++HR  Q L   GRT
Sbjct: 101 LDLSLHERVDSSKATSRGSSLGQKRKAEPQPALTPQRDLRSKGVFQRHR--QELAAAGRT 160

Query: 197 C----------------------VCFKCGREGHIAPNCNKKK-TNYADQPSSSNQASGVR 256
                                  VCF+C + GH A  C +K       QPS         
Sbjct: 161 LRELPPCGRCKRVHGGRCLLGSGVCFRCRQPGHTADACPRKHFETTLHQPS--------- 220

Query: 257 PTQHQGKIFATTRQEAENLNVVVTGTIPILGHYAFVLFDSGSTHSFISASFVSQANLELE 299
            T  QG++FATTRQEAE    VVTGT+PILGHYAFVLFDSGS+HSFIS+ FV    LE+E
Sbjct: 221 -TFQQGRVFATTRQEAERAGAVVTGTLPILGHYAFVLFDSGSSHSFISSVFVQHVGLEVE 280

[Close]

BLAST of Lag0007874 vs. ExPASy TrEMBL
Match: A0A5A7T3M7 (Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold69G00720 PE=4 SV=1)

HSP 1 Score: 163.7 bits (413), Expect = 1.2e-36
Identity = 104/250 (41.60%), Postives = 139/250 (55.60%), Query Frame = 0


Query: 77  GNRTVEEFKTEFARLSRFAPALVAVEVDKVERFITGLKEEIQGSVVAHEPQDYATTIRVA 136
           G+ TVE++  EF  LSRFAP ++A E  + ++F+ GL+ +IQG V A  P  +A  +R+A
Sbjct: 214 GDMTVEQYDAEFDMLSRFAPEMIATEAARADKFVRGLRLDIQGLVRAFRPATHADALRLA 273

Query: 137 ELIDRRPSVISSE-----PSSGHKRRYDQMSSLDEVRPRTVDRKHRISQ----------- 196
             +  +    SS+      +SG KR+ +Q       R    D + R  Q           
Sbjct: 274 VDLSLQERANSSKTAGRGSTSGQKRKAEQQPVPVPQRNFRPDGEFRSFQQKPFEAGEAAR 333

Query: 197 --------GLIRIGR----TCVCFKCGREGHIAPNCNKKKTNYADQPSSSNQASGVRPTQ 256
                   G   +GR    T  CFKC +EGH A  C  + T  A      NQ +G     
Sbjct: 334 GKPLCTTCGKHHLGRCLFGTRTCFKCRQEGHTADRCPLRLTGIA-----HNQGAG---AP 393

Query: 257 HQGKIFATTRQEAENLNVVVTGTIPILGHYAFVLFDSGSTHSFISASFVSQANLELEPLG 299
           HQG++FAT R EAE    VVTGT+P+LGHYA VLFDSGS+HSFIS++FVS A LE+EPL 
Sbjct: 394 HQGRVFATNRTEAEKAGTVVTGTLPVLGHYALVLFDSGSSHSFISSAFVSHARLEVEPLH 453

The following BLAST results are available for this feature:

BLAST of Lag0007874 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022937437.1	5.6e-41	42.06	uncharacterized protein LOC111443845 [Cucurbita moschata] >XP_022937438.1 unchar...	[more]
XP_022962669.1	3.6e-40	43.09	uncharacterized protein LOC111463090 [Cucurbita moschata]	[more]
KAA0039626.1	7.6e-38	44.05	gag protease polyprotein [Cucumis melo var. makuwa]	[more]
KAA0061214.1	1.9e-36	42.29	gag protease polyprotein [Cucumis melo var. makuwa] >TYK06262.1 gag protease pol...	[more]
KAA0036197.1	2.4e-36	41.60	gag protease polyprotein [Cucumis melo var. makuwa]	[more]

BLAST of Lag0007874 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of Lag0007874 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1FB78	2.7e-41	42.06	uncharacterized protein LOC111443845 OS=Cucurbita moschata OX=3662 GN=LOC1114438...	[more]
A0A6J1HHR1	1.8e-40	43.09	uncharacterized protein LOC111463090 OS=Cucurbita moschata OX=3662 GN=LOC1114630...	[more]
A0A5A7TC57	3.7e-38	44.05	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A5A7V1M1	9.1e-37	42.29	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A5A7T3M7	1.2e-36	41.60	Gag protease polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]

BLAST of Lag0007874 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001878	Zinc finger, CCHC-type	SMART	SM00343	c2hcfinal6	coord: 190..206 e-value: 0.003 score: 26.8
IPR001878	Zinc finger, CCHC-type	PROSITE	PS50158	ZF_CCHC	coord: 191..204 score: 10.196651
None	No IPR available	PFAM	PF08284	RVP_2	coord: 230..297 e-value: 4.8E-17 score: 62.0
None	No IPR available	GENE3D	4.10.60.10		coord: 152..220 e-value: 2.4E-5 score: 26.1
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 145..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 205..229
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 152..171
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..229
None	No IPR available	CDD	cd00303	retropepsin_like	coord: 251..298 e-value: 3.23659E-8 score: 48.4868
IPR032567	LDOC1-related	PANTHER	PTHR15503	LDOC1 RELATED	coord: 68..292
IPR001969	Aspartic peptidase, active site	PROSITE	PS00141	ASP_PROTEASE	coord: 261..272
IPR036875	Zinc finger, CCHC-type superfamily	SUPERFAMILY	57756	Retrovirus zinc finger-like domains	coord: 187..211

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Lag0007874.1	Lag0007874.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006508	proteolysis
molecular_function	GO:0004190	aspartic-type endopeptidase activity
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0008270	zinc ion binding