Lag0007783 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCCTGAAAAAGAGAAAACACCGGAGCCGGTGCAGGAGGCTCATGTTGAAGTCGTAATGCCTGAACCACCAAAGCGCCGCCGCATCAAACGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCACCGCCGACGACGGACTCTGAGAAAGAAAAGAGGGAAGCTGAAAATAAGACAAAGGAAGAAGAGGCAAGGAAGGTAGAGGAAGAGATTTTGCGAGAGCAACGAGGTGACAAGGGCAAAGGAATTGCCGGAGCATCGGGTGAGATTGAGGAACCAACGGTACCGTTCATTCGCTTTGTCAGCGATCTTGCTCGAGCAAAATACCAAGAGGTGCTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGACAGTAATTTGCCTAGGTTCTTAAAGTCTGGAATCGTGAACCTCGGGTGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACGCCAACCTTGACGTTAAGAATGATTTTGAAGTTATTGTGCAAGGAGTGCCTGTACAATGGAGCCCAGAAGCCATTAATAATTTGTTTGATCTCCAGGATTTCCACATGCAGTTTTCAATGAGATGA ATGCCTGAAAAAGAGAAAACACCGGAGCCGGTGCAGGAGGCTCATGTTGAAGTCGTAATGCCTGAACCACCAAAGCGCCGCCGCATCAAACGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCACCGCCGACGACGGACTCTGAGAAAGAAAAGAGGGAAGCTGAAAATAAGACAAAGGAAGAAGAGGCAAGGAAGGTAGAGGAAGAGATTTTGCGAGAGCAACGAGGTGACAAGGGCAAAGGAATTGCCGGAGCATCGGGTGAGATTGAGGAACCAACGGTACCGTTCATTCGCTTTGTCAGCGATCTTGCTCGAGCAAAATACCAAGAGGTGCTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGACAGTAATTTGCCTAGGTTCTTAAAGTCTGGAATCGTGAACCTCGGGTGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACGCCAACCTTGACGTTAAGAATGATTTTGAAGTTATTGTGCAAGGAGTGCCTGTACAATGGAGCCCAGAAGCCATTAATAATTTGTTTGATCTCCAGGATTTCCACATGCAGTTTTCAATGAGATGA ATGCCTGAAAAAGAGAAAACACCGGAGCCGGTGCAGGAGGCTCATGTTGAAGTCGTAATGCCTGAACCACCAAAGCGCCGCCGCATCAAACGGAAGGCGGGTCGCGTGAGGGTGATTCGGAACACTCCATCACCGCCGACGACGGACTCTGAGAAAGAAAAGAGGGAAGCTGAAAATAAGACAAAGGAAGAAGAGGCAAGGAAGGTAGAGGAAGAGATTTTGCGAGAGCAACGAGGTGACAAGGGCAAAGGAATTGCCGGAGCATCGGGTGAGATTGAGGAACCAACGGTACCGTTCATTCGCTTTGTCAGCGATCTTGCTCGAGCAAAATACCAAGAGGTGCTGAAGCGTGATTTCTTGTTCGAGCGGGGATTTGACAGTAATTTGCCTAGGTTCTTAAAGTCTGGAATCGTGAACCTCGGGTGGAGGCAATTTTGTGCGAAACCAGAACCTGTCAATTCCAACATTGTTCGGGAATTTTACGCCAACCTTGACGTTAAGAATGATTTTGAAGTTATTGTGCAAGGAGTGCCTGTACAATGGAGCCCAGAAGCCATTAATAATTTGTTTGATCTCCAGGATTTCCACATGCAGTTTTCAATGAGATGA MPEKEKTPEPVQEAHVEVVMPEPPKRRRIKRKAGRVRVIRNTPSPPTTDSEKEKREAENKTKEEEARKVEEEILREQRGDKGKGIAGASGEIEEPTVPFIRFVSDLARAKYQEVLKRDFLFERGFDSNLPRFLKSGIVNLGWRQFCAKPEPVNSNIVREFYANLDVKNDFEVIVQGVPVQWSPEAINNLFDLQDFHMQFSMR Homology
BLAST of Lag0007783 vs. NCBI nr
Match: PON90635.1 (hypothetical protein TorRG33x02_134920 [Trema orientale]) HSP 1 Score: 73.2 bits (178), Expect = 2.9e-09 Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 0
BLAST of Lag0007783 vs. NCBI nr
Match: KAE8695166.1 (hypothetical protein F3Y22_tig00110733pilonHSYRG00282 [Hibiscus syriacus]) HSP 1 Score: 72.8 bits (177), Expect = 3.8e-09 Identity = 35/98 (35.71%), Postives = 55/98 (56.12%), Query Frame = 0
BLAST of Lag0007783 vs. NCBI nr
Match: KAE8658284.1 (hypothetical protein F3Y22_tig00116971pilonHSYRG00034 [Hibiscus syriacus]) HSP 1 Score: 70.1 bits (170), Expect = 2.5e-08 Identity = 35/105 (33.33%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Lag0007783 vs. NCBI nr
Match: PON85987.1 (hypothetical protein TorRG33x02_181920, partial [Trema orientale]) HSP 1 Score: 69.7 bits (169), Expect = 3.3e-08 Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of Lag0007783 vs. NCBI nr
Match: KAE8680640.1 (hypothetical protein F3Y22_tig00111372pilonHSYRG00020 [Hibiscus syriacus]) HSP 1 Score: 68.6 bits (166), Expect = 7.3e-08 Identity = 34/105 (32.38%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Lag0007783 vs. ExPASy TrEMBL
Match: A0A2P5EYL5 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_134920 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 1.4e-09 Identity = 43/102 (42.16%), Postives = 56/102 (54.90%), Query Frame = 0
BLAST of Lag0007783 vs. ExPASy TrEMBL
Match: A0A6A2ZUE4 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00110733pilonHSYRG00282 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.9e-09 Identity = 35/98 (35.71%), Postives = 55/98 (56.12%), Query Frame = 0
BLAST of Lag0007783 vs. ExPASy TrEMBL
Match: A0A6A2XVV9 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116971pilonHSYRG00034 PE=4 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 1.2e-08 Identity = 35/105 (33.33%), Postives = 54/105 (51.43%), Query Frame = 0
BLAST of Lag0007783 vs. ExPASy TrEMBL
Match: A0A2P5EK98 (Uncharacterized protein (Fragment) OS=Trema orientale OX=63057 GN=TorRG33x02_181920 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.6e-08 Identity = 40/102 (39.22%), Postives = 55/102 (53.92%), Query Frame = 0
BLAST of Lag0007783 vs. ExPASy TrEMBL
Match: A0A6A2WM54 (Uncharacterized protein OS=Hibiscus syriacus OX=106335 GN=F3Y22_tig00116939pilonHSYRG00213 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 3.5e-08 Identity = 34/105 (32.38%), Postives = 57/105 (54.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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