Lag0007780 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATGAAACTAGAACGGAGGAAGGAACGAGGAGAGAGGAGAGAGCATTCGGGGGGGGTAAGTTTTTTTAGGTTTTGTTTTGCCTTTAGATTATTGGTGTCGACAATCTTTTGAAGCAATTGGAGAATATTTTGGGGGTTTAGTAAACATTTCAAGTGAAACTCTTAACATGACTATTGTTTCAGAAGCTAGAATTCAGGTTAAATCAAATTTATGTGGTTTTATGCCAGCTACAATTGAACTTAAAGATAGTTTTAGAGGGAATGTTTATCTTCATTTTGGTGATGTGTCTACTTTGGATTCTCCGAAAATTATTCACCATAGTCTTGAGTTGAGCGATTTTTCCAACCCAATGGACCTTTTTCGAATCAATCAAGTAATGGAAGATGAAGGGTTTAATTCTCAAATTCAAAATCCAGATGTTGAATACTATGGAAAAATTCTGGAAATTCCTTCTGTATCAAGGGACCCTAAGGTAATTTACAAGTTTGTTCAATTACCTTGTGATGATTGTAAAATTAAAGGACTTTCTGTTTTGCCGAATATTTCTGAAGTTGAAGAGTCAACGAGATTTAATTTTGATGATGCTTTATTATCAAGAAAGTCCTTTTCAGATTCCCCTGTAATAGGAAAGGACTTTTCGAATATTGTAAAGGCCCGTGGTAATTTCCAAGAACATGCAGTAATTGAGAAAGAGAATGAGTTATTTAATGTTGATGACCTTGCAGTAATTGAGAAAGAGAAGAGTTATTAAAAGCCAATGGGCTGCATGTCTATGGTTTTCCTTCTGCGAGAGTATATTTTCCAAGGAGCCTTTGCATGAAGTGGGGGAGGTTTCTAAAAAAATAAGGAGGATGCTGTATTTATTAAAGAGATAGTAAATGATGGGGAGGTTCTTAAGAATAAGGAGGATGCTGCATTTATTGATGAGTTAGTAAATGATATTTTATCCCAAGTTTCAAATATGGCAGATAAGTCTTTATCTCAGGGGCAATCTTTCAAATGTCCAGCAATTAATAACTTAGAGGCTTCTTCAAATGTGAACTCGGTTCAGGATATTTTCAATTCCGATTTAAATGAAAATTATTCTTTGTCTGAATACTTGGACTCCGGTATTCCATCTAGTGTTAAAGAAGTGCATGATAATTTCTGTAAATCTTATTCTAAATATTATGTGCGAAAGAAAGGACCAAGTGTGGAAGGTGATATTTTAAAGGTTAATGCTGATGTTTTGGAAGAAGTTGTCTCGAAGGTATTGGTTCCTCAAGAGTCTATTTTAATCAGGATTCTTCAAAGGCAGCAGATAAGTCAGGTGATTTTGCAATCAATAGTTGTAATATTGGGCCAGAAGGTGTGCTTTTCACAAGAGTTCTTTTTCCCTCTTCTAATGATAGTTTGCCGGCAAATGCTTCATCTCATTGTGGTAATAAAAATTCAGATGATGAGTCAGAGGTTAGTATGAGCAGTGAAGAGATTGATTTTCCTCCAGAAAATCTTTTGAATGTTGATAGTTGTGATATCTCGGTAAATGATGATTTGAATTTGCTCTTTACTTCTCCATCAAAGTCTAATGCTTCAAGCAAGAAGATTGTGGATGACTTTAAGTCTTCAATTCCATCTGCTTCAGATAATTTAGATACTTTTTCTGCTCTTATTAAAGCCAGTGGTCTACAGTTCAAGGAAATTCTGTCATCCCCATTGTTGGAAGCAACTAAGCAGTACTAG ATGGATGAAACTAGAACGGAGGAAGGAACGAGGAGAGAGGAGAGAGCATTCGGGGGGGAAGCTAGAATTCAGGTTAAATCAAATTTATGTGGTTTTATGCCAGCTACAATTGAACTTAAAGATAGTTTTAGAGGGAATGTTTATCTTCATTTTGGTGATGTGTCTACTTTGGATTCTCCGAAAATTATTCACCATAGTCTTGAGTTGAGCGATTTTTCCAACCCAATGGACCTTTTTCGAATCAATCAAGTAATGGAAGATGAAGGGTTTAATTCTCAAATTCAAAATCCAGATGTTGAATACTATGGAAAAATTCTGGAAATTCCTTCTGTATCAAGGGACCCTAAGGTAATTTACAAGTTTGTTCAATTACCTTGTGATGATTGTAAAATTAAAGGACTTTCTGTTTTGCCGAATATTTCTGAAGTTGAAGAGTCAACGAGATTTAATTTTGATGATGCTTTATTATCAAGAAAGTCCTTTTCAGATTCCCCTGTAATAGGAAAGGACTTTTCGAATATTGTAAAGGCCCGTGATAAGTCTTTATCTCAGGGGCAATCTTTCAAATGTCCAGCAATTAATAACTTAGAGGCTTCTTCAAATGTGAACTCGGTTCAGGATATTTTCAATTCCGATTTAAATGAAAATTATTCTTTGTCTGAATACTTGGACTCCGGTATTCCATCTAGTGTTAAAGAAGTGCATGATAATTTCTGTAAATCTTATTCTAAATATTATGTGCGAAAGAAAGGACCAAGTGTGGAAGGTGATATTTTAAAGGATTCTTCAAAGGCAGCAGATAAGTCAGGTGATTTTGCAATCAATAGTTGTAATATTGGGCCAGAAGGTGTGCTTTTCACAAGAGTTCTTTTTCCCTCTTCTAATGATAGTTTGCCGGCAAATGCTTCATCTCATTGTGGTAATAAAAATTCAGATGATGAGTCAGAGGTTAGTATGAGCAGTGAAGAGATTGATTTTCCTCCAGAAAATCTTTTGAATGTTGATAGTTGTGATATCTCGGTAAATGATGATTTGAATTTGCTCTTTACTTCTCCATCAAAGTCTAATGCTTCAAGCAAGAAGATTGTGGATGACTTTAAGTCTTCAATTCCATCTGCTTCAGATAATTTAGATACTTTTTCTGCTCTTATTAAAGCCAGTGGTCTACAGTTCAAGGAAATTCTGTCATCCCCATTGTTGGAAGCAACTAAGCAGTACTAG ATGGATGAAACTAGAACGGAGGAAGGAACGAGGAGAGAGGAGAGAGCATTCGGGGGGGAAGCTAGAATTCAGGTTAAATCAAATTTATGTGGTTTTATGCCAGCTACAATTGAACTTAAAGATAGTTTTAGAGGGAATGTTTATCTTCATTTTGGTGATGTGTCTACTTTGGATTCTCCGAAAATTATTCACCATAGTCTTGAGTTGAGCGATTTTTCCAACCCAATGGACCTTTTTCGAATCAATCAAGTAATGGAAGATGAAGGGTTTAATTCTCAAATTCAAAATCCAGATGTTGAATACTATGGAAAAATTCTGGAAATTCCTTCTGTATCAAGGGACCCTAAGGTAATTTACAAGTTTGTTCAATTACCTTGTGATGATTGTAAAATTAAAGGACTTTCTGTTTTGCCGAATATTTCTGAAGTTGAAGAGTCAACGAGATTTAATTTTGATGATGCTTTATTATCAAGAAAGTCCTTTTCAGATTCCCCTGTAATAGGAAAGGACTTTTCGAATATTGTAAAGGCCCGTGATAAGTCTTTATCTCAGGGGCAATCTTTCAAATGTCCAGCAATTAATAACTTAGAGGCTTCTTCAAATGTGAACTCGGTTCAGGATATTTTCAATTCCGATTTAAATGAAAATTATTCTTTGTCTGAATACTTGGACTCCGGTATTCCATCTAGTGTTAAAGAAGTGCATGATAATTTCTGTAAATCTTATTCTAAATATTATGTGCGAAAGAAAGGACCAAGTGTGGAAGGTGATATTTTAAAGGATTCTTCAAAGGCAGCAGATAAGTCAGGTGATTTTGCAATCAATAGTTGTAATATTGGGCCAGAAGGTGTGCTTTTCACAAGAGTTCTTTTTCCCTCTTCTAATGATAGTTTGCCGGCAAATGCTTCATCTCATTGTGGTAATAAAAATTCAGATGATGAGTCAGAGGTTAGTATGAGCAGTGAAGAGATTGATTTTCCTCCAGAAAATCTTTTGAATGTTGATAGTTGTGATATCTCGGTAAATGATGATTTGAATTTGCTCTTTACTTCTCCATCAAAGTCTAATGCTTCAAGCAAGAAGATTGTGGATGACTTTAAGTCTTCAATTCCATCTGCTTCAGATAATTTAGATACTTTTTCTGCTCTTATTAAAGCCAGTGGTCTACAGTTCAAGGAAATTCTGTCATCCCCATTGTTGGAAGCAACTAAGCAGTACTAG MDETRTEEGTRREERAFGGEARIQVKSNLCGFMPATIELKDSFRGNVYLHFGDVSTLDSPKIIHHSLELSDFSNPMDLFRINQVMEDEGFNSQIQNPDVEYYGKILEIPSVSRDPKVIYKFVQLPCDDCKIKGLSVLPNISEVEESTRFNFDDALLSRKSFSDSPVIGKDFSNIVKARDKSLSQGQSFKCPAINNLEASSNVNSVQDIFNSDLNENYSLSEYLDSGIPSSVKEVHDNFCKSYSKYYVRKKGPSVEGDILKDSSKAADKSGDFAINSCNIGPEGVLFTRVLFPSSNDSLPANASSHCGNKNSDDESEVSMSSEEIDFPPENLLNVDSCDISVNDDLNLLFTSPSKSNASSKKIVDDFKSSIPSASDNLDTFSALIKASGLQFKEILSSPLLEATKQY Homology
BLAST of Lag0007780 vs. NCBI nr
Match: KAA0063414.1 (uncharacterized protein E6C27_scaffold508G00510 [Cucumis melo var. makuwa] >TYK11672.1 uncharacterized protein E5676_scaffold828G00460 [Cucumis melo var. makuwa]) HSP 1 Score: 90.1 bits (222), Expect = 4.7e-14 Identity = 39/73 (53.42%), Postives = 57/73 (78.08%), Query Frame = 0
BLAST of Lag0007780 vs. NCBI nr
Match: TYK16775.1 (DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]) HSP 1 Score: 88.6 bits (218), Expect = 1.4e-13 Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Lag0007780 vs. NCBI nr
Match: KAA0031952.1 (Retrotransposable element Tf2 [Cucumis melo var. makuwa]) HSP 1 Score: 88.6 bits (218), Expect = 1.4e-13 Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Lag0007780 vs. NCBI nr
Match: XP_038904899.1 (uncharacterized protein LOC120091119 isoform X2 [Benincasa hispida]) HSP 1 Score: 80.9 bits (198), Expect = 2.8e-11 Identity = 37/70 (52.86%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of Lag0007780 vs. NCBI nr
Match: TYK28792.1 (pseudouridylate synthase 7-like protein isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 79.3 bits (194), Expect = 8.3e-11 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Lag0007780 vs. ExPASy TrEMBL
Match: A0A5A7V878 (DUF4283 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold828G00460 PE=4 SV=1) HSP 1 Score: 90.1 bits (222), Expect = 2.3e-14 Identity = 39/73 (53.42%), Postives = 57/73 (78.08%), Query Frame = 0
BLAST of Lag0007780 vs. ExPASy TrEMBL
Match: A0A5A7SLN9 (Retrotransposable element Tf2 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold134G00330 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.6e-14 Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Lag0007780 vs. ExPASy TrEMBL
Match: A0A5D3CZ35 (DNA/RNA polymerases superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold96G00310 PE=4 SV=1) HSP 1 Score: 88.6 bits (218), Expect = 6.6e-14 Identity = 42/96 (43.75%), Postives = 60/96 (62.50%), Query Frame = 0
BLAST of Lag0007780 vs. ExPASy TrEMBL
Match: A0A5D3DYX0 (Pseudouridylate synthase 7-like protein isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold403G001570 PE=4 SV=1) HSP 1 Score: 79.3 bits (194), Expect = 4.0e-11 Identity = 37/69 (53.62%), Postives = 48/69 (69.57%), Query Frame = 0
BLAST of Lag0007780 vs. ExPASy TrEMBL
Match: A0A5A7U128 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1280G00090 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 8.9e-11 Identity = 38/86 (44.19%), Postives = 57/86 (66.28%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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