Lag0007757 (gene) Sponge gourd (AG‐4) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGAATAAATCCTTCTCCAAAACTCTCCACAAAAAGGAAAAAGAAAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGAGTGAACAAAAGACTTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGACCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATTGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCACCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATTCTACAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAA ATGTTGAATAAATCCTTCTCCAAAACTCTCCACAAAAAGGAAAAAGAAAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGAGTGAACAAAAGACTTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGACCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATTGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCACCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATTCTACAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAA ATGTTGAATAAATCCTTCTCCAAAACTCTCCACAAAAAGGAAAAAGAAAACCTTGCAACTTCCTACTGCATCGACGTAGAAGAAGTTGACAATTCCAAGAAGAGTGAACAAAAGACTTCCGTCTTCGATCGCATCAAGCCTCCAACTACTCGTCCTTCGGTATTCCAAAGAATGAGTATGACCGCGACAGAGGAAGAAAATCAATGTTCGATGTCCACCTCCACTCGACCTTCAGCTTTCCAAAGGCTAAGTGTCTCCACATTGAAGAAAAGTCAACCTTCGACATCTGTTTTTGATCACCTCAAAGTAACAAGCGATCAACCTAAAAGAAAGATGGATAACTTGGAGGTGAAACTTTTGGATGAAGTAAACAACGACAAGAAGCTTCAAAGTAGCATCCCGTCACGTATGAAGAGGAAGTTCTCTGTTCTCATAAATACAGAAGGTTCCTTGAAGGTGAAACCAAATCTCATTATCTTGACCAATTCTACAAGTCAAGGACCTGATCAAGACCATGATGAAGATAAGAGCTTTTAA MLNKSFSKTLHKKEKENLATSYCIDVEEVDNSKKSEQKTSVFDRIKPPTTRPSVFQRMSMTATEEENQCSMSTSTRPSAFQRLSVSTLKKSQPSTSVFDHLKVTSDQPKRKMDNLEVKLLDEVNNDKKLQSSIPSRMKRKFSVLINTEGSLKVKPNLIILTNSTSQGPDQDHDEDKSF Homology
BLAST of Lag0007757 vs. NCBI nr
Match: KAA0044978.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 166.8 bits (421), Expect = 1.7e-37 Identity = 93/151 (61.59%), Postives = 114/151 (75.50%), Query Frame = 0
BLAST of Lag0007757 vs. NCBI nr
Match: KAA0050736.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYJ95700.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 166.4 bits (420), Expect = 2.3e-37 Identity = 96/165 (58.18%), Postives = 120/165 (72.73%), Query Frame = 0
BLAST of Lag0007757 vs. NCBI nr
Match: KAA0040811.1 (retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 166.0 bits (419), Expect = 2.9e-37 Identity = 93/151 (61.59%), Postives = 115/151 (76.16%), Query Frame = 0
BLAST of Lag0007757 vs. NCBI nr
Match: KAA0068201.1 (retrotransposon gag protein [Cucumis melo var. makuwa] >TYK21121.1 retrotransposon gag protein [Cucumis melo var. makuwa]) HSP 1 Score: 165.6 bits (418), Expect = 3.8e-37 Identity = 97/164 (59.15%), Postives = 118/164 (71.95%), Query Frame = 0
BLAST of Lag0007757 vs. NCBI nr
Match: TYK18884.1 (gag protease polyprotein [Cucumis melo var. makuwa]) HSP 1 Score: 164.5 bits (415), Expect = 8.6e-37 Identity = 95/164 (57.93%), Postives = 120/164 (73.17%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Sponge gourd (AG-4) v1
Date Performed: 2022-08-01 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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